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Thermotogae
Classification of phyla is from NCBI page
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41 projects found  

1 accessions found for Cytophaga hutchinsonii ATCC 33406  

Data for CP000383  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000383.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000383_2741 CDS_3173538-3177206 94.0 2.5e-26 1
CP000383_2849 CDS_3311131-3315105 88.2 1.1e-24 1
CP000383_3037 CDS_3528324-3530894 86.1 4.4e-24 1
CP000383_2051 CDS_2430594-2427118 81.5 8.5e-23 1
CP000383_1961 CDS_2319918-2321651 74.6 8e-21 1
CP000383_1112 CDS_1303143-1304264 68.1 5.4e-19 1
CP000383_0359 CDS_437005-434585 66.2 1.9e-18 1
CP000383_1333 CDS_1579244-1580419 62.2 2.5e-17 1
CP000383_2990 CDS_3484339-3483287 58.6 2.6e-16 1
CP000383_2048 CDS_2425512-2424034 52.2 1.7e-14 1
CP000383_1194 CDS_1396305-1394644 51.5 2.7e-14 1
CP000383_2995 CDS_3488850-3490397 47.6 3.4e-13 1
CP000383_3411 CDS_4014306-4012351 47.2 4.7e-13 1
CP000383_1215 CDS_1428340-1433196 47.1 4.9e-13 1
CP000383_2538 CDS_2955659-2956708 45.1 1.7e-12 1
CP000383_2834 CDS_3290740-3293199 44.0 3.6e-12 1
CP000383_3475 CDS_4089905-4088646 43.0 7.1e-12 1
CP000383_1050 CDS_1233016-1235016 42.9 7.7e-12 1
CP000383_1875 CDS_2220281-2223076 41.6 1.8e-11 1
CP000383_3292 CDS_3825060-3821998 41.6 1.8e-11 1
CP000383_2689 CDS_3116598-3115330 40.1 4.8e-11 1
CP000383_3482 CDS_4095078-4096418 39.4 7.4e-11 1
CP000383_2168 CDS_2557216-2553512 38.3 1.5e-10 1
CP000383_1873 CDS_2219476-2218253 38.2 1.6e-10 1
CP000383_3488 CDS_4100646-4102406 37.6 2.5e-10 1
CP000383_2054 CDS_2434489-2432507 37.0 3.6e-10 1
CP000383_2028 CDS_2407454-2406396 35.9 7.2e-10 1
CP000383_1639 CDS_1949384-1952665 35.8 8e-10 1
CP000383_2052 CDS_2430838-2432028 35.2 1.2e-09 1
CP000383_0786 CDS_896874-897728 29.0 6.7e-08 1
CP000383_3483 CDS_4096437-4097783 27.8 1.4e-07 1
CP000383_1075 CDS_1269534-1271288 26.9 2.6e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000383_2741 1/1 715 780 .. 1 87 [] 94.0 2.5e-26
CP000383_2849 1/1 818 883 .. 1 87 [] 88.2 1.1e-24
CP000383_3037 1/1 360 425 .. 1 87 [] 86.1 4.4e-24
CP000383_2051 1/1 472 540 .. 1 87 [] 81.5 8.5e-23
CP000383_1961 1/1 352 420 .. 1 87 [] 74.6 8e-21
CP000383_1112 1/1 152 220 .. 1 87 [] 68.1 5.4e-19
CP000383_0359 1/1 354 421 .. 1 87 [] 66.2 1.9e-18
CP000383_1333 1/1 172 240 .. 1 87 [] 62.2 2.5e-17
CP000383_2990 1/1 118 185 .. 1 87 [] 58.6 2.6e-16
CP000383_2048 1/1 274 342 .. 1 87 [] 52.2 1.7e-14
CP000383_1194 1/1 323 389 .. 1 87 [] 51.5 2.7e-14
CP000383_2995 1/1 297 365 .. 1 87 [] 47.6 3.4e-13
CP000383_3411 1/1 436 501 .. 1 87 [] 47.2 4.7e-13
CP000383_1215 1/1 1388 1453 .. 1 87 [] 47.1 4.9e-13
CP000383_2538 1/1 128 193 .. 1 87 [] 45.1 1.7e-12
CP000383_2834 1/1 598 666 .. 1 87 [] 44.0 3.6e-12
CP000383_3475 1/1 213 279 .. 1 87 [] 43.0 7.1e-12
CP000383_1050 1/1 435 501 .. 1 87 [] 42.9 7.7e-12
CP000383_1875 1/1 697 765 .. 1 87 [] 41.6 1.8e-11
CP000383_3292 1/1 790 858 .. 1 87 [] 41.6 1.8e-11
CP000383_2689 1/1 209 275 .. 1 87 [] 40.1 4.8e-11
CP000383_3482 1/1 223 289 .. 1 87 [] 39.4 7.4e-11
CP000383_2168 1/1 1014 1086 .. 1 87 [] 38.3 1.5e-10
CP000383_1873 1/1 180 248 .. 1 87 [] 38.2 1.6e-10
CP000383_3488 1/1 352 420 .. 1 87 [] 37.6 2.5e-10
CP000383_2054 1/1 432 500 .. 1 87 [] 37.0 3.6e-10
CP000383_2028 1/1 131 200 .. 1 87 [] 35.9 7.2e-10
CP000383_1639 1/1 845 913 .. 1 87 [] 35.8 8e-10
CP000383_2052 1/1 167 235 .. 1 87 [] 35.2 1.2e-09
CP000383_0786 1/1 219 284 .] 1 87 [] 29.0 6.7e-08
CP000383_3483 1/1 225 291 .. 1 87 [] 27.8 1.4e-07
CP000383_1075 1/1 366 431 .. 1 87 [] 26.9 2.6e-07

Alignments of top-scoring domains:
CP000383_2741: domain 1 of 1, from 715 to 780: score 94.0, E = 2.5e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ flan+sHE+RTP+++++g+++lL e t+l eeq
CP000383_2 715 VKENFLANMSHEIRTPMNGVIGMIDLLNE---------TPLMEEQ-- 750

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ti++++e ll+++nd+Ldls+ieag
CP000383_2 751 ----------RKYVQTIKKSSETLLNILNDILDLSKIEAG 780

CP000383_2849: domain 1 of 1, from 818 to 883: score 88.2, E = 1.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ flan+sHE+RTP+++I+g+ael+ + t l+ q
CP000383_2 818 AKEMFLANMSHEIRTPMNGILGMAELISR---------TSLDVTQ-- 853

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ i+++a+ ll +ind+Ld+++ie+g
CP000383_2 854 ----------KKHVQLIKNSADNLLIIINDILDIAKIESG 883

CP000383_3037: domain 1 of 1, from 360 to 425: score 86.1, E = 4.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++fl+n+sHE+RTP++aI+g++ +L + +el+e+q
CP000383_3 360 FKTRFLSNMSHEIRTPINAILGFTAILSK---------QELTEQQ-- 395

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ i ++e ll+Li ++Ld+s+ie+g
CP000383_3 396 ----------KKLLKNISISGELLLKLIGNILDISKIEEG 425

CP000383_2051: domain 1 of 1, from 472 to 540: score 81.5, E = 8.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++I+ +++lL ++ + lse++
CP000383_2 472 YKSEFLANMSHELRTPLNSILILSQLLADNKN------KSLSEKE-- 510

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + i +++ ll+Lin++Ldls+ e+g
CP000383_2 511 ----------VEFAQNICNSGSDLLELINEILDLSKVESG 540

CP000383_1961: domain 1 of 1, from 352 to 420: score 74.6, E = 8e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+a++sHE++TP+++I++ ++lL++++ + l+eeq
CP000383_1 352 AKTNFIATVSHEFKTPISSIKMSLQLLENKQI------GMLNEEQ-- 390

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +le+i+++a+rll++ +lL +++ e+g
CP000383_1 391 ----------QNLLESIKEDANRLLKITGELLNMTQVESG 420

CP000383_1112: domain 1 of 1, from 152 to 220: score 68.1, E = 5.4e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+f+ ++sHE+RTPL++I+ ++l+ ++ ++++e++r
CP000383_1 152 LKSRFVTMASHEFRTPLSTILSSVSLISRYN-------DPKDEDKR- 190

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++i+++++ l +++nd+L lsr+e+g
CP000383_1 191 ----------LKHVNRIKSSVNNLTSILNDFLSLSRLEEG 220

CP000383_0359: domain 1 of 1, from 354 to 421: score 66.2, E = 1.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s+fl++++HELRTPL +I+g+++lL e +++s+ ++
CP000383_0 354 NRSQFLSMMAHELRTPLQSIIGFSDLLHE---------QNKSAADKS 391

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y e+i++++ +ll+ in lLd s+i+ag
CP000383_0 392 ----------FHYSEIIKNSSSHLLQTINLLLDRSKIDAG 421

CP000383_1333: domain 1 of 1, from 172 to 240: score 62.2, E = 2.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L PL++I+g++ lL ++l ++++++++
CP000383_1 172 EMEQFAYVASHDLQEPLNTIQGFIALLSAKL-------EDAPDPDV- 210

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ i +++ r+ +Li lL++sri+ +
CP000383_1 211 ----------TQYLHYINQSTLRMTNLIKGLLEYSRIGKN 240

CP000383_2990: domain 1 of 1, from 118 to 185: score 58.6, E = 2.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++efla++sHEL+TPL a +g++++L e +++++ ++
CP000383_2 118 FRREFLADVSHELKTPLFAAQGFVHTLME---------GAMDDLNVR 155

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+++ +++ l+ L++dl ++s++e g
CP000383_2 156 ----------ERFLNKAAYSLDGLNVLVEDLITISQLEIG 185

CP000383_2048: domain 1 of 1, from 274 to 342: score 52.2, E = 1.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL +I ya++L++ a + ++e+
CP000383_2 274 ELESFSYSVSHDLRAPLRSINNYAQMLED------AFAAQMDEKS-- 312

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l i+r a r++ Li+dlL +sr++
CP000383_2 313 ----------TRLLGNIKRNAFRMDTLIDDLLAFSRLGRK 342

CP000383_1194: domain 1 of 1, from 323 to 389: score 51.5, E = 2.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+L PL I+ ++elL+ + ++++r
CP000383_1 323 DLEQFAYIASHDLQEPLRKIQSFTELLEL----------NITDKERS 359

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl++i+++a r++ Li d+L +sr+ +
CP000383_1 360 ----------KKYLDKIDSAASRMSGLIKDVLNYSRLSQS 389

CP000383_2995: domain 1 of 1, from 297 to 365: score 47.6, E = 3.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ sH+L PL +++ ++elL ++++ + l+e
CP000383_2 297 ELEQFAHITSHDLQEPLRSLSSFVELLSADYN------DVLDETG-- 335

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ i ++a+r+++Li lL++s + +
CP000383_2 336 ----------KTYLNYISDSANRMRNLITGLLEYSLLSRE 365

CP000383_3411: domain 1 of 1, from 436 to 501: score 47.2, E = 4.7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ +sH+++ PL +I+g+a+l l + +++
CP000383_3 436 QLDAFVYKASHDIKGPLKSIIGLAKLGLL---------DVQDPNA-- 471

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey++ i+ ++ rl++L++dlL+ ++i +
CP000383_3 472 ----------REYFKHIETSSTRLDNLLQDLLQVAKIKNT 501

CP000383_1215: domain 1 of 1, from 1388 to 1453: score 47.1, E = 4.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+L PL Ir +++lL ++ +++
CP000383_1 1388 DLEQFAYIASHDLQEPLRKIRVFISLLNQ----------KRAKDDV- 1423

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl++i +aer+++Li ++Ld+sr+
CP000383_1 1424 ----------DTYLQKIAASAERMSSLIKNVLDFSRLSYD 1453

CP000383_2538: domain 1 of 1, from 128 to 193: score 45.1, E = 1.7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ sH++RTP++ I g+++l+le +++++ +
CP000383_2 128 DLETFIYKCSHDMRTPVSNIYGLIQLALE---------DTKDPHT-- 163

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+ i+++++rl+++i +l sr+ +
CP000383_2 164 ----------VEFLNMIKHQTDRLDHIIHQLANTSRLMHD 193

CP000383_2834: domain 1 of 1, from 598 to 666: score 44.0, E = 3.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ ++sHELR PL +I+g+++l l ++ ++ + +++
CP000383_2 598 DLDRFVYSASHELRAPLKSILGLTHLVLHDV-------QTDNYQDI- 636

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey+++i+r+++rl++ + d+ ++sr
CP000383_2 637 ----------PEYISRIERSVHRLDETVKDIIEYSRNNRL 666

CP000383_3475: domain 1 of 1, from 213 to 279: score 43.0, E = 7.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ n+sHEL TPL+ + +elL e +lse +
CP000383_3 213 SQKQFIENASHELQTPLAISINKLELLAE--------KNDLSESD-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++++ ++rl rL lL ls+ie+
CP000383_3 250 ----------LSMVASAIENLHRLTRLNKSLLLLSKIENK 279

CP000383_1050: domain 1 of 1, from 435 to 501: score 42.9, E = 7.7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+L PL Ir +++l+ e + e +
CP000383_1 435 YLEQFAYIASHDLQEPLRKIRIFSDLIIE---------NSSDGELV- 471

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+++i ++er+++L+ +lL +sr+ +
CP000383_1 472 ----------EKYISKINVASERMSSLVKELLNYSRLSSL 501

CP000383_1875: domain 1 of 1, from 697 to 765: score 41.6, E = 1.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ sH+L PL I+++++ +++ +++ls e
CP000383_1 697 ELRSFTYISSHDLQEPLRKIQTFISRIQN------SDSGTLSKEG-- 735

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y+ +i+++a+ + LindlL++sr a
CP000383_1 736 ----------ANYFARIQQSANKMKTLINDLLTYSRTSAT 765

CP000383_3292: domain 1 of 1, from 790 to 858: score 41.6, E = 1.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+L+ P+ I+++a L+++l ++l+e +
CP000383_3 790 DLQQFAHVASHDLKEPVRKIKTFAGRLEDQLK------DKLDESAI- 829

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e+i +++r++++i+ +L +s i a
CP000383_3 830 -----------RFIEKINVATNRMSNMIDGVLAYSTINAS 858

CP000383_2689: domain 1 of 1, from 209 to 275: score 40.1, E = 4.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ef n sHEL TPL+ Ir +elL + +l +e+
CP000383_2 209 SQKEFNENSSHELQTPLAIIRNKLELLIQ--------SKNLKDED-- 245

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++e++ ++rl +L l ls+ie++
CP000383_2 246 ----------MVLIESVFYTINRLTQLNKGLILLSKIENN 275

CP000383_3482: domain 1 of 1, from 223 to 289: score 39.4, E = 7.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ +++ +sH+LR P+++I g++elL +ls e+
CP000383_3 223 MKDHLFRIISHDLRSPINTIHGLTELLIS---------KKLSREEE- 259

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++e +++++++ ++L+++lL s + +
CP000383_3 260 ----------TVITEQLKKSTDSTNQLLDNLLSWSAFQIN 289

CP000383_2168: domain 1 of 1, from 1014 to 1086: score 38.3, E = 1.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e+++ ++HE+++PLt +++ ++ Ll +++ +g+ + +ee
CP000383_2 1014 AWREMARQVAHEIKNPLTPMKLKLQYLLQRFN--NGGSKPTDEEL-- 1056

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++til ++++l+++ + + + ++ +
CP000383_2 1057 ----------KQSFQTILTQVDSLSEIASSFSSFYKLPEL 1086

CP000383_1873: domain 1 of 1, from 180 to 248: score 38.2, E = 1.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+++++ ++H+LR P + I +a lLl+ + + e
CP000383_1 180 TKDKLFSIIAHDLRGPFNNIVSLAGLLLDAV-------KVPDVESS- 218

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+ i++ a++ l L+++lL ++ ++g
CP000383_1 219 ----------QQYVGMIHSTAQHTLVLLDNLLNWAKSQTG 248

CP000383_3488: domain 1 of 1, from 352 to 420: score 37.6, E = 2.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f +sH+L PL I+++++ + e ++++ls +
CP000383_3 352 ELASFNHVASHDLQEPLRKIQTFISRIYE------KESSNLSQQG-- 390

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yle+i+ +a+r++ Li+dlL +sr
CP000383_3 391 ----------KDYLERIQIAAKRMRVLIDDLLLFSRTNKV 420

CP000383_2054: domain 1 of 1, from 432 to 500: score 37.0, E = 3.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f+ +sH+L+ P+ ++ ++ +++e+ el+ +
CP000383_2 432 DLLQFAHVASHDLKEPVRKVKIFSGRIRDEFK------KELPVKG-- 470

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yle+i+++++r+l++i+ +L +s + +
CP000383_2 471 ----------HIYLEKIQHSTDRMLSMIEGVLMYSTLSNL 500

CP000383_2028: domain 1 of 1, from 131 to 200: score 35.9, E = 7.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ ++sH+L++P++ I ++++++ el + +++e +
CP000383_2 131 DLDTFVYTASHDLKNPVSNIESLVSIMQYELK------HGADAEAV- 170

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++i ++++r +n+l ++sri+a+
CP000383_2 171 ----------EPVMSRITEALNRFKTTLNELTEISRIDAP 200

CP000383_1639: domain 1 of 1, from 845 to 913: score 35.8, E = 8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ +sH+L PL I+++++lL+ + +l+e+
CP000383_1 845 ELAQFAYIASHDLQEPLRKISMFTQLLEGRIG------NNLDEQS-- 883

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i ++a r++ Li d+L +s + +
CP000383_1 884 ----------KTQLSKISKSAIRMNTLIKDVLSYSELIKE 913

CP000383_2052: domain 1 of 1, from 167 to 235: score 35.2, E = 1.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ ++sH LR PL++++g+++l+++e+ +e+++ +
CP000383_2 167 ELDSFIYSISHSLRGPLSTVSGLLHLAEKES-------QEKNDMSV- 205

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ + ++ +++rl+ ++++ d s+
CP000383_2 206 ----------KELHQMMETCVKRLDTTLRQMVDQSKNARL 235

CP000383_0786: domain 1 of 1, from 219 to 284: score 29.0, E = 6.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ + + sHE R PL+ I+g++ lL+ ++ ++eq
CP000383_0 219 QLNTYAYMNSHEVRGPLARIMGLSILLKQ---------EKDPDEQ-- 254

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e+il + e l+++i+++ l + + +
CP000383_0 255 ----------TFLAEKILFSCEELDEIIQRMNLLLQSDKE 284

CP000383_3483: domain 1 of 1, from 225 to 291: score 27.8, E = 1.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+++l+ +sH+ R+P++ ++ ++e++l ++ see++
CP000383_3 225 LKNKLLSIISHDVRQPVNNLLSLSEIMLQ---------AKISEEEI- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++++ + + +++++lL+ s + +
CP000383_3 262 ----------QLLGLRLKETSIYVYQMLDNLLTWSYSQMN 291

CP000383_1075: domain 1 of 1, from 366 to 431: score 26.9, E = 2.6e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ +sH+L+ P+++++g+ el+++ + + e
CP000383_1 366 ELDSFFYRVSHDLKGPISSLLGLNELIEK---------EQFDGEA-- 401

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y++ ++ + r+++++ dl +++ri +
CP000383_1 402 ----------LKYFNMYKKLSTRIDAIVMDLITITRISSD 431


Histogram of all scores:
score obs exp (one = represents 13 sequences)
----- --- ---
-14 19 0|==
-13 92 2|*=======
-12 224 86|======*===========
-11 486 448|==================================*===
-10 751 832|==========================================================*
-9 751 859|==========================================================*
-8 545 643|========================================== *
-7 387 405|============================== *
-6 215 233|=================*
-5 118 128|=========*
-4 72 68|=====*
-3 33 36|==*
-2 14 18|=*
-1 15 9|*=
0 4 5|*
1 3 2|*
> 2 56 -|=====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 265.8240
P(chi-square) = 0

Total sequences searched: 3785

Whole sequence top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 33K


Acknowledgements:

This research is funded by:

Developed by: