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Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Pseudomonas aeruginosa UCBPP-PA14  

Data for CP000438  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000438.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000438_4193 CDS_4635805-4638582 105.1 2.8e-29 1
CP000438_3485 CDS_3887946-3889901 93.7 4.9e-26 1
CP000438_5167 CDS_5722815-5725643 93.0 7.6e-26 1
CP000438_0855 CDS_927751-932004 92.6 9.9e-26 1
CP000438_1530 CDS_1670152-1667396 91.3 2.3e-25 1
CP000438_2194 CDS_2392292-2389932 89.7 6.4e-25 1
CP000438_4813 CDS_5327621-5324826 89.0 1e-24 1
CP000438_4811 CDS_5323549-5320295 85.5 9.8e-24 1
CP000438_5680 CDS_6300460-6301791 85.2 1.2e-23 1
CP000438_5295 CDS_5868988-5866676 76.9 2.7e-21 1
CP000438_1016 CDS_1098155-1101793 76.6 3.2e-21 1
CP000438_3659 CDS_4076381-4074936 76.5 3.5e-21 1
CP000438_1973 CDS_2160811-2163036 74.7 1.1e-20 1
CP000438_3460 CDS_3862963-3860306 73.3 2.9e-20 1
CP000438_4853 CDS_5365845-5367437 72.9 3.6e-20 1
CP000438_2214 CDS_2410876-2409545 72.5 4.7e-20 1
CP000438_5806 CDS_6447605-6449392 69.3 4e-19 1
CP000438_4373 CDS_4832881-4831499 68.5 6.5e-19 1
CP000438_0482 CDS_536757-538181 68.0 8.9e-19 1
CP000438_3953 CDS_4392918-4391560 65.4 5e-18 1
CP000438_5439 CDS_6044551-6045627 64.9 7e-18 1
CP000438_4570 CDS_5075703-5074423 64.2 1.1e-17 1
CP000438_5199 CDS_5752476-5753867 63.5 1.7e-17 1
CP000438_2457 CDS_2661144-2664122 62.6 3e-17 1
CP000438_4016 CDS_4460759-4459551 62.6 3.2e-17 1
CP000438_3700 CDS_4125450-4127072 60.7 1.1e-16 1
CP000438_0850 CDS_923232-921046 60.0 1.7e-16 1
CP000438_1728 CDS_1887201-1883722 55.4 3.5e-15 1
CP000438_3109 CDS_3473829-3471184 54.8 4.9e-15 1
CP000438_1818 CDS_1978005-1976668 54.1 7.7e-15 1
CP000438_1940 CDS_2116784-2115489 52.5 2.3e-14 1
CP000438_4191 CDS_4634900-4633563 52.3 2.5e-14 1
CP000438_5086 CDS_5636684-5638117 51.4 4.5e-14 1
CP000438_3290 CDS_3682952-3684238 51.4 4.5e-14 1
CP000438_5516 CDS_6124768-6123449 49.9 1.3e-13 1
CP000438_5034 CDS_5575942-5578893 49.2 2e-13 1
CP000438_2353 CDS_2543109-2541769 48.4 3.3e-13 1
CP000438_2602 CDS_2828954-2827632 48.3 3.4e-13 1
CP000438_2911 CDS_3245934-3243835 46.5 1.1e-12 1
CP000438_2559 CDS_2782857-2781439 46.3 1.3e-12 1
CP000438_3847 CDS_4286772-4289348 44.4 4.5e-12 1
CP000438_5834 CDS_6479448-6477682 44.0 5.8e-12 1
CP000438_3092 CDS_3456069-3454285 43.5 7.8e-12 1
CP000438_5481 CDS_6085898-6087736 38.2 2.6e-10 1
CP000438_4483 CDS_4982794-4980026 36.3 8.5e-10 1
CP000438_1834 CDS_1990360-1991781 35.2 1.8e-09 1
CP000438_3754 CDS_4184198-4186099 32.6 9.7e-09 1
CP000438_4589 CDS_5091554-5093650 32.4 1.1e-08 2
CP000438_4684 CDS_5193829-5192561 31.7 1.7e-08 1
CP000438_0767 CDS_830905-833181 29.4 7.7e-08 1
CP000438_3931 CDS_4370651-4369305 27.2 3.3e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000438_4193 1/1 283 348 .. 1 87 [] 105.1 2.8e-29
CP000438_3485 1/1 265 330 .. 1 87 [] 93.7 4.9e-26
CP000438_5167 1/1 414 479 .. 1 87 [] 93.0 7.6e-26
CP000438_0855 1/1 764 829 .. 1 87 [] 92.6 9.9e-26
CP000438_1530 1/1 407 472 .. 1 87 [] 91.3 2.3e-25
CP000438_2194 1/1 305 370 .. 1 87 [] 89.7 6.4e-25
CP000438_4813 1/1 453 518 .. 1 87 [] 89.0 1e-24
CP000438_4811 1/1 492 557 .. 1 87 [] 85.5 9.8e-24
CP000438_5680 1/1 209 276 .. 1 87 [] 85.2 1.2e-23
CP000438_5295 1/1 278 343 .. 1 87 [] 76.9 2.7e-21
CP000438_1016 1/1 709 775 .. 1 87 [] 76.6 3.2e-21
CP000438_3659 1/1 243 309 .. 1 87 [] 76.5 3.5e-21
CP000438_1973 1/1 247 313 .. 1 87 [] 74.7 1.1e-20
CP000438_3460 1/1 650 718 .. 1 87 [] 73.3 2.9e-20
CP000438_4853 1/1 309 375 .. 1 87 [] 72.9 3.6e-20
CP000438_2214 1/1 225 291 .. 1 87 [] 72.5 4.7e-20
CP000438_5806 1/1 375 443 .. 1 87 [] 69.3 4e-19
CP000438_4373 1/1 244 309 .. 1 87 [] 68.5 6.5e-19
CP000438_0482 1/1 255 320 .. 1 87 [] 68.0 8.9e-19
CP000438_3953 1/1 222 287 .. 1 87 [] 65.4 5e-18
CP000438_5439 1/1 131 196 .. 1 87 [] 64.9 7e-18
CP000438_4570 1/1 211 277 .. 1 87 [] 64.2 1.1e-17
CP000438_5199 1/1 243 309 .. 1 87 [] 63.5 1.7e-17
CP000438_2457 1/1 607 673 .. 1 87 [] 62.6 3e-17
CP000438_4016 1/1 181 247 .. 1 87 [] 62.6 3.2e-17
CP000438_3700 1/1 179 244 .. 1 87 [] 60.7 1.1e-16
CP000438_0850 1/1 503 566 .. 1 87 [] 60.0 1.7e-16
CP000438_1728 1/1 798 864 .. 1 87 [] 55.4 3.5e-15
CP000438_3109 1/1 513 579 .. 1 87 [] 54.8 4.9e-15
CP000438_1818 1/1 227 291 .. 1 87 [] 54.1 7.7e-15
CP000438_1940 1/1 235 299 .. 1 87 [] 52.5 2.3e-14
CP000438_4191 1/1 233 292 .. 1 87 [] 52.3 2.5e-14
CP000438_5086 1/1 239 304 .. 1 87 [] 51.4 4.5e-14
CP000438_3290 1/1 208 273 .. 1 87 [] 51.4 4.5e-14
CP000438_5516 1/1 222 282 .. 1 87 [] 49.9 1.3e-13
CP000438_5034 1/1 756 822 .. 1 87 [] 49.2 2e-13
CP000438_2353 1/1 234 293 .. 1 87 [] 48.4 3.3e-13
CP000438_2602 1/1 225 289 .. 1 87 [] 48.3 3.4e-13
CP000438_2911 1/1 330 396 .. 1 87 [] 46.5 1.1e-12
CP000438_2559 1/1 249 315 .. 1 87 [] 46.3 1.3e-12
CP000438_3847 1/1 496 561 .. 1 87 [] 44.4 4.5e-12
CP000438_5834 1/1 362 430 .. 1 87 [] 44.0 5.8e-12
CP000438_3092 1/1 202 267 .. 1 87 [] 43.5 7.8e-12
CP000438_5481 1/1 378 446 .. 1 87 [] 38.2 2.6e-10
CP000438_4483 1/1 690 760 .. 1 87 [] 36.3 8.5e-10
CP000438_1834 1/1 270 313 .. 1 65 [. 35.2 1.8e-09
CP000438_3754 1/1 407 475 .. 1 87 [] 32.6 9.7e-09
CP000438_4684 1/1 207 273 .. 1 87 [] 31.7 1.7e-08
CP000438_0767 1/1 526 599 .. 1 87 [] 29.4 7.7e-08
CP000438_3931 1/1 238 300 .. 1 87 [] 27.2 3.3e-07

Alignments of top-scoring domains:
CP000438_4193: domain 1 of 1, from 283 to 348: score 105.1, E = 2.8e-29
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTPL++I+g++ lL++ +els+ q
CP000438_4 283 IKSEFLANMSHEIRTPLNGILGFTNLLQK---------SELSPRQ-- 318

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl ti+++ae+ll +in++Ld+s+ieag
CP000438_4 319 ----------QDYLTTIQKSAESLLGIINEILDFSKIEAG 348

CP000438_3485: domain 1 of 1, from 265 to 330: score 93.7, E = 4.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTP+++++g+++lL++ te++ eq
CP000438_3 265 AKSDFLAMMSHELRTPMNGVLGMLQLLET---------TEQTREQ-- 300

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+ + +++e+ll+ ind+Ld+srie g
CP000438_3 301 ----------AEYTALATESTEHLLKVINDILDFSRIERG 330

CP000438_5167: domain 1 of 1, from 414 to 479: score 93.0, E = 7.6e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k efla +sHE+RTP+++++g++elLl t+ls++q
CP000438_5 414 TKAEFLAKISHEIRTPMNGVLGMTELLLG---------TPLSAKQ-- 449

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ti+++++ ll Lin++Ld+s++e+g
CP000438_5 450 ----------RDYVQTIHSAGNELLTLINEILDISKLESG 479

CP000438_0855: domain 1 of 1, from 764 to 829: score 92.6, E = 9.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTP++a++g+++l++ t+l+e q
CP000438_0 764 AKSSFLANMSHEIRTPMNAVLGMLQLARQ---------TDLNERQ-- 799

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+++ ++a +ll L+nd+Ld+s+ieag
CP000438_0 800 ----------RDYLDKASSAATSLLGLLNDILDYSKIEAG 829

CP000438_1530: domain 1 of 1, from 407 to 472: score 91.3, E = 2.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHE+RTPL++++g+++lL++ t+l+ q
CP000438_1 407 AKSRFLAKMSHEIRTPLNGVLGMLQLLRD---------TPLDRGQ-- 442

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y+eti +++ l + ind+Ld++rie+g
CP000438_1 443 ----------AAYVETIASSGSALMSVINDILDYARIESG 472

CP000438_2194: domain 1 of 1, from 305 to 370: score 89.7, E = 6.4e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ flan+sHE+RTPL++++g+++l l+ ++l++eq
CP000438_2 305 ARASFLANMSHEIRTPLNGLLGMLSLSLD---------GPLTPEQ-- 340

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l++++++++ l +L+nd+Ldls+ eag
CP000438_2 341 ----------RQQLSIAHDSGKVLVELLNDVLDLSKFEAG 370

CP000438_4813: domain 1 of 1, from 453 to 518: score 89.0, E = 1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTPL +++g++elL + tels +q
CP000438_4 453 AKTLFLATMSHEIRTPLYGMLGTLELLGR---------TELSRQQ-- 488

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ i++++ ll+Li+d+Ld s+ieag
CP000438_4 489 ----------AGYLKAIQHSSSTLLQLISDVLDVSKIEAG 518

CP000438_4811: domain 1 of 1, from 492 to 557: score 85.5, E = 9.8e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla +sHE+RTPL +++g++elL t+l+e q
CP000438_4 492 AKTLFLARMSHEIRTPLYGVLGTLELLDL---------TTLNERQ-- 527

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl+ti++++ l +Li+d+Ld s+ieag
CP000438_4 528 ----------RAYLRTIQSSSATLMQLISDVLDVSKIEAG 557

CP000438_5680: domain 1 of 1, from 209 to 276: score 85.2, E = 1.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPLt+I gy+e+Ll+++ ++ ++
CP000438_5 209 MRKDFVANVSHELRTPLTVIAGYLETLLDNV-------EDVNPRW-- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ ++++a r+++L+ndlL l+++ea
CP000438_5 247 ----------LRALQQMQQQAGRMQNLLNDLLLLAKLEAT 276

CP000438_5295: domain 1 of 1, from 278 to 343: score 76.9, E = 2.7e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL++I+g+aelL+e + l+e +
CP000438_5 278 AKSRFLATMSHEIRTPLNGILGMAELLRE---------ASLGERD-- 313

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+ + ++e ll+++n++L ++r+e+
CP000438_5 314 ----------RQRLRALATAGEGLLAILNEVLHFARLEEA 343

CP000438_1016: domain 1 of 1, from 709 to 775: score 76.6, E = 3.2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTP++a++g +el+l+ ++e + +
CP000438_1 709 AKTTFLATMSHEIRTPMNAVIGILELALK--------RAETGRVD-- 745

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +e+++ +a++ll+Li d+Ld++rie+g
CP000438_1 746 ----------RSSIEIAYASAKSLLELIGDILDIARIESG 775

CP000438_3659: domain 1 of 1, from 243 to 309: score 76.5, E = 3.5e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f a+++HELRTPLt ++g ++++l e+s e+
CP000438_3 243 RLESFNADVAHELRTPLTNLIGQTQVALS---------RERSGEH-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+e l++ l+e+erl++++nd+L l+r+++g
CP000438_3 279 ---------YEEVLQSNLEELERLRAIVNDMLFLARADQG 309

CP000438_1973: domain 1 of 1, from 247 to 313: score 74.7, E = 1.1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP++a++g +el l l +eqr
CP000438_1 247 AKSVFLATMSHEIRTPMNAVIGILELVLQ----------RLAPEQRE 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r le+++++a +l+ Li d+Ld ++ie+g
CP000438_1 284 ----------RASLEVAYEAAGSLQLLIGDILDVAKIESG 313

CP000438_3460: domain 1 of 1, from 650 to 718: score 73.3, E = 2.9e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +la++sH+LRTPLta+rg ++ Ll+ + ++ ++ +r
CP000438_3 650 LRSALLASVSHDLRTPLTAMRGSIDSLLALG-------EAIPPADR- 688

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+le+ ++eaerl+r i++lLd++r+++g
CP000438_3 689 ----------RELLESTRDEAERLDRYIQNLLDMTRLGHG 718

CP000438_4853: domain 1 of 1, from 309 to 375: score 72.9, E = 3.6e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a+++HE+R+PL aI+ +a+lL+e ++el++++
CP000438_4 309 GLGRLTAGIAHEIRNPLGAISHAAQLLQE--------SEELDAPD-- 345

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++++i+++++r++ i+++L+lsr ++
CP000438_4 346 ----------RRLTQIIQDQSKRMNLVIENVLQLSRRRQA 375

CP000438_2214: domain 1 of 1, from 225 to 291: score 72.5, E = 4.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTPLt++++ +++ l ++s e+
CP000438_2 225 RLSAFSADIAHELRTPLTSLLTQTQVVLS---------RPRSLED-- 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l+ l+e+erl +++nd+L l+++++g
CP000438_2 261 ---------YREALHGNLEELERLTAMVNDMLLLAKADHG 291

CP000438_5806: domain 1 of 1, from 375 to 443: score 69.3, E = 4e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+sef+ +sHELRTP+t+++++ +lL+e + + ++e r
CP000438_5 375 VRSEFVLRASHELRTPVTGMQMAFSLLRE--------RLDFPAESRE 413

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++t+++e rl LindlL +sr ++g
CP000438_5 414 ----------ADLIQTVDEEMSRLVLLINDLLNFSRYQTG 443

CP000438_4373: domain 1 of 1, from 244 to 309: score 68.5, E = 6.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f+a+++HELRTPL+a+++ +el l+ e+ +e
CP000438_4 244 RQSQFIADAAHELRTPLAALKARLELGLR----------EQEPEA-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r let + ++rl +L n+lL l+rie+g
CP000438_4 279 ---------WRSTLETTAKNTDRLIHLANQLLSLARIESG 309

CP000438_0482: domain 1 of 1, from 255 to 320: score 68.0, E = 8.9e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +l HEL+ PL+aIrg+aelL e+++eqr
CP000438_0 255 YVERYVHTLTHELKSPLAAIRGAAELLDG----------EMPAEQR- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ i e+erl++Li++lL l++ e+
CP000438_0 291 ----------ARFVGNIAGESERLQQLIERLLSLAQVEQR 320

CP000438_3953: domain 1 of 1, from 222 to 287: score 65.4, E = 5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e+++++sHELRTP++ +r+ +e++++ +e +
CP000438_3 222 VQREMVRAVSHELRTPVARLRFGLEMIET---------AETDGAR-- 257

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yle ++++++ l++L++++L+++r+e+g
CP000438_3 258 ----------LKYLEGMDNDIQDLDKLVDEMLTYARLEQG 287

CP000438_5439: domain 1 of 1, from 131 to 196: score 64.9, E = 7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++l+HE+++PL +Irg+a+lL + el+ee +
CP000438_5 131 TTKLLVRGLAHEIKNPLGGIRGAAQLLSR----------ELPEESL- 166

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+++i++ea+rl++L++++L ++ +
CP000438_5 167 ----------KDYTNVIIEEADRLRNLVDRMLGSNKLPNL 196

CP000438_4570: domain 1 of 1, from 211 to 277: score 64.2, E = 1.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPL +I + +elL e ++ l++
CP000438_4 211 REQLFTSDVSHELRTPLMVIATSCELLAE--------EPSLGPRA-- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r le++ +++e +++L++ +L l+r++ g
CP000438_4 248 ----------RGQLERMTKATEEMRDLVQTFLLLARAQKG 277

CP000438_5199: domain 1 of 1, from 243 to 309: score 63.5, E = 1.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f a+l+HE+RTP+ +++g+ +++l+ +++s e+
CP000438_5 243 RLQQFSADLAHEIRTPIGSLMGHGQVALR---------QPRSNEE-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ ++ + ++e+er+ r+++ +L l+r++
CP000438_5 279 ---------YQALIASNQEELERIARMVESILFLARADDV 309

CP000438_2457: domain 1 of 1, from 607 to 673: score 62.6, E = 3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fl+++sHE+RTPL+a++g+ el l++++k + l+ +
CP000438_2 607 AKSVFLSTMSHEIRTPLNAVIGLQELVLKKGEK-----GVLDLDS-- 646

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++++++a+ ll L+ ++Ldlsrie+g
CP000438_2 647 -------------LSIAQEAAQGLLLLLGNILDLSRIESG 673

CP000438_4016: domain 1 of 1, from 181 to 247: score 62.6, E = 3.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++a+l+H++RTPL+a ++ya L e ++l+ +q+
CP000438_4 181 ALGRMVASLAHQIRTPLSAALLYAGHLSE---------QALPTDQQ- 217

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++++ ++ l+++++d+L ++r e +
CP000438_4 218 ----------QRFAGRLKERLHELEHQVRDMLVFARGELP 247

CP000438_3700: domain 1 of 1, from 179 to 244: score 60.7, E = 1.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks++la +sH+LR+P+++I +++ L++ + l++e+
CP000438_3 179 EKSRLLAQASHDLRQPIHSIGLFTACLRD---------ARLGDEE-- 214

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++++ i+r++ ++L + +Ldl +++g
CP000438_3 215 ----------RRLVDNIDRSLLNVSQLFRSILDLYTLDNG 244

CP000438_0850: domain 1 of 1, from 503 to 566: score 60.0, E = 1.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a l H+LR+PL +I+++a lL +++r
CP000438_0 503 MRQRLIAVLGHDLRNPLQSISMAAALLSS-------------SDTRT 536

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + i ++ r++rL++++Ld+sr+++g
CP000438_0 537 ----------TELRQHISASSSRMERLVSQILDMSRLQSG 566

CP000438_1728: domain 1 of 1, from 798 to 864: score 55.4, E = 3.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+++ +L +++ + ++
CP000438_1 798 SKTRFLAAVSHDLMQPLNAARLFSAALAH---------QDALPGEV- 834

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++++ +++++++ ++Li dlLd+sr+e+g
CP000438_1 835 ----------RDLVQHLDSSLRSAEDLITDLLDISRLESG 864

CP000438_3109: domain 1 of 1, from 513 to 579: score 54.8, E = 4.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+++++L+e ++ ++ +
CP000438_3 513 SKTKFLAAVSHDLLQPLNAARLFTSALQE--------RGSATRDN-- 549

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ i +++e ++L+ l d+s+++ag
CP000438_3 550 ----------EALVNNISHSLEDVENLLGTLVDISKLDAG 579

CP000438_1818: domain 1 of 1, from 227 to 291: score 54.1, E = 7.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l+++sHELR PL+ +r ++ l+++ + ++ r
CP000438_1 227 SQRQLLRDVSHELRSPLARLRIALALAER-----------AEPQAR- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++++e +rl++Li ++L l+r++a+
CP000438_1 262 ----------AQMWPRLEQECDRLEALIGEILALARLDAE 291

CP000438_1940: domain 1 of 1, from 235 to 299: score 52.5, E = 2.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++fl+++sHELRTPL++I +++elL + + +
CP000438_1 235 REERFLRYASHELRTPLAVIGMNLELLDQ---------PGRAPSP-- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l++i+r+a ++++ + lL lsr +
CP000438_1 271 -----------HALQRIRRSALAMQQMTETLLWLSRESGE 299

CP000438_4191: domain 1 of 1, from 233 to 292: score 52.3, E = 2.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++l++lsHELRTPL+ ++ +ae l
CP000438_4 233 LQRQLLRDLSHELRTPLARLQVAAEGTLS------------------ 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e++++e++ +++L+++ L+l++++++
CP000438_4 262 ---------AQLLRERLEQEVQGMQQLVDNTLELAWMDTE 292

CP000438_5086: domain 1 of 1, from 239 to 304: score 51.4, E = 4.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++++++HE+RTPL+++r++a+++l+ +e + +
CP000438_5 239 AERRLTSDAAHEIRTPLASLRTHAQVALR---------SEDPKAH-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l + r++er++ L +++L l+r++
CP000438_5 275 ----------ARGLLQVSRSVERISTLMEQILLLARLDGD 304

CP000438_3290: domain 1 of 1, from 208 to 273: score 51.4, E = 4.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++ ++sHELRTP++ +++ +e L + ++e r
CP000438_3 208 NQRELTNAVSHELRTPISRLSFELEQLNK----------QVDAEVR- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++e ++ ++ l++++++lL+++r+e+g
CP000438_3 244 ----------HDLIEDMRADLGELEEMVSELLTYARLEHG 273

CP000438_5516: domain 1 of 1, from 222 to 282: score 49.9, E = 1.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +r+ +elL e +e
CP000438_5 222 ERELMLAGVSHDLRTPLTRLRLSLELLPE---------SE------- 252

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++e + r++e ++++++++L + r +
CP000438_5 253 ----------REMVEDMVRDIEDMDAILDQFLAFIRDGRD 282

CP000438_5034: domain 1 of 1, from 756 to 822: score 49.2, E = 2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+ +P+t+I +a+ L+e + e + e
CP000438_5 756 SIGRLAAGVAHEIGNPITGIACLAQNLRE--------EREGDGEL-- 792

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ e il++++r +r+++ l+ ++ ++
CP000438_5 793 ----------TEISEQILDQTKRVSRIVQSLMSFAHSGSH 822

CP000438_2353: domain 1 of 1, from 234 to 293: score 48.4, E = 3.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l++lsHELRTPL+ +r + + el++eq+
CP000438_2 234 QQRLLLRTLSHELRTPLARLRIAHDS-------------ELPPEQL- 266

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++re+ ++rL++d Ldl++++++
CP000438_2 267 -------------RQRLDREIGDMQRLLEDTLDLAWMDTE 293

CP000438_2602: domain 1 of 1, from 225 to 289: score 48.3, E = 3.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++HELR PLtaI+++++++++ te + +
CP000438_2 225 RERRLTGDAAHELRSPLTAIKTHLQVARM---------TEGAAAE-- 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +++ a+rl r +++lL l+r e
CP000438_2 261 -----------QALAHAEEGADRLHRTLDQLLLLARVEGS 289

CP000438_2911: domain 1 of 1, from 330 to 396: score 46.5, E = 1.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ Lt+I+g + lL++ l+ +qr
CP000438_2 330 SLGHLTGGVAHDFNNLLTVIIGSLGLLKK----------RLPGDQRT 366

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ +l++a+r +L +++L ++r +
CP000438_2 367 ----------ADLLQNALEAAQRGANLTQRMLSFARKQRL 396

CP000438_2559: domain 1 of 1, from 249 to 315: score 46.3, E = 1.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f +l+HELR P+ ++ ++Ll +++++
CP000438_2 249 QLSQFSDDLAHELRAPICNLLVRNQVLLS---------QHRDSTA-- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+le+ +e+erl+r++ d+L l + +++
CP000438_2 285 ---------YREALESNAEELERLSRIVTDMLFLVQVDNP 315

CP000438_3847: domain 1 of 1, from 496 to 561: score 44.4, E = 4.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ Lt I++ +el+++ ++
CP000438_3 496 MVGQLTGGIAHDFNNLLTPIMASLELIRR---------RLDDARS-- 531

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +l++aer ++L+ +lL+++r ++
CP000438_3 532 ----------TDLIDGALQSAERARNLVGRLLTFARRQTL 561

CP000438_5834: domain 1 of 1, from 362 to 430: score 44.0, E = 5.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++++ a+l+HE+++PLta r+ + L+ ld + + +e
CP000438_5 362 ALGQMSAALAHEINQPLTAQRMQLASLRLLLD------AGRHDEA-- 400

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l +i++ +er+ +L l +++r ag
CP000438_5 401 ----------RQALPRIDQMLERMAALTGHLKTFARKSAG 430

CP000438_3092: domain 1 of 1, from 202 to 267: score 43.5, E = 7.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++ la++sH+L +PL+a r+++++L+e l++ +
CP000438_3 202 SKDKYLAAASHDLLQPLNAARLLVDTLRE---------RGLPAAE-- 237

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e+ + ++e + L+ dlL+++r+++
CP000438_3 238 ----------LQLVERTHLALEGAETLLTDLLEIARLDQS 267

CP000438_5481: domain 1 of 1, from 378 to 446: score 38.2, E = 2.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ + a++sHEL++PL+aIr ya+ ++ ld + ++e+
CP000438_5 378 ALGTMSASISHELNQPLAAIRSYADNARVLLD------HQRTEDA-- 416

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r le i + + r+ ++i l ++r
CP000438_5 417 ----------RGNLEQISDLTTRMASIIAHLKAYARGARR 446

CP000438_4483: domain 1 of 1, from 690 to 760: score 36.3, E = 8.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++++l+HE ++PL+++r+++ ++ +++ + l+ + +
CP000438_4 690 SLGEMVSGLAHEVKQPLHVLRMTLFNMRQRMN-----SVGLDGDYL- 730

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e le+++ ++ r +rL++ l +sr a
CP000438_4 731 ----------GEKLERMDAQVLRVDRLVSHLGVFSRKSAL 760

CP000438_1834: domain 1 of 1, from 270 to 313: score 35.2, E = 1.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++++++sH+LRTP+t +r+ +elL++ + l e+
CP000438_1 270 ERGQLFSAISHDLRTPITRLRLRVELLED---------ERLQEKF-- 305

peLRledpeyreyletil<-*
+ l+ ++
CP000438_1 306 ----------GRDLDELE 313

CP000438_3754: domain 1 of 1, from 407 to 475: score 32.6, E = 9.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +++HEL++PL+a+r+++ ++l + e++
CP000438_3 407 VIGQMSTSIAHELNQPLAALRTLSGNTVRFL-------QRGKLETA- 445

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l ti + ++r+ r+ l+ ++r
CP000438_3 446 ----------STNLATINELVDRMGRITASLRAFARRSDD 475

CP000438_4684: domain 1 of 1, from 207 to 273: score 31.7, E = 1.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +a+++HEL TPL++++ ++ L+ + ++++
CP000438_4 207 AVATQAAGAAHELGTPLATMSVLLNELRQ---------ERPQDPTL- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l ++++++++ + +++l + ++
CP000438_4 244 ----------QEDLALLQEQVKQCKHTLQQLVRAAEADRR 273

CP000438_0767: domain 1 of 1, from 526 to 599: score 29.4, E = 7.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
++e++++++HE+++PL+a++ ya++ +++l l++ +e+
CP000438_0 526 TLGELASGIAHEINQPLAAVMNYASASQRYL--AvLGSQPEAAGRV- 569

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l +i + a + + i +l+ + r ++
CP000438_0 570 -----------AEGLARIGEHAGHAAEVIKRLRAFLRKGQR 599

CP000438_3931: domain 1 of 1, from 238 to 300: score 27.2, E = 3.3e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + l +l+H L+TPL++++g + L e ++ + eq
CP000438_3 238 RYRHSLGDLAHSLKTPLAVLQGVGDQLAE---------EPGNREQ-- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ ++er++++i L+ + ++
CP000438_3 274 -------------VRVLQGQIERMSQQIGYQLQRASLRKS 300


Histogram of all scores:
score obs exp (one = represents 19 sequences)
----- --- ---
-14 5 0|=
-13 50 4|*==
-12 190 134|=======*==
-11 428 698|======================= *
-10 831 1295|============================================ *
-9 1092 1338|==========================================================*
-8 1094 1001|====================================================*=====
-7 790 631|=================================*========
-6 564 363|===================*==========
-5 337 199|==========*=======
-4 185 106|=====*====
-3 108 56|==*===
-2 74 29|=*==
-1 33 15|*=
0 23 8|*=
1 18 4|*
2 6 2|*
3 3 1|*
4 3 0|=
5 0 0|
6 1 0|=
7 1 0|=
> 8 56 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 812.9012
P(chi-square) = 0

Total sequences searched: 5892

Whole sequence top hits:
tophits_s report:
Total hits: 51
Satisfying E cutoff: 51
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 50
Satisfying E cutoff: 50
Total memory: 41K


Acknowledgements:

This research is funded by:

Developed by: