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Classification of phyla is from NCBI page
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132 projects found  

1 accessions found for Maricaulis maris MCS10  

Data for CP000449  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000449.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000449_0712 CDS_817387-815726 99.6 5.1e-28 1
CP000449_2214 CDS_2422697-2419485 95.1 9.6e-27 1
CP000449_0947 CDS_1049159-1046424 93.1 3.6e-26 1
CP000449_2511 CDS_2744615-2746408 91.5 1e-25 1
CP000449_0896 CDS_990671-992359 89.8 3.2e-25 1
CP000449_2190 CDS_2395045-2397621 89.1 4.8e-25 1
CP000449_2123 CDS_2317659-2320106 88.9 5.5e-25 1
CP000449_2115 CDS_2310441-2308618 85.6 4.9e-24 1
CP000449_3003 CDS_3298586-3300559 84.5 1e-23 1
CP000449_0633 CDS_732688-734295 83.7 1.7e-23 1
CP000449_0475 CDS_562352-563668 82.0 5.1e-23 1
CP000449_1870 CDS_2048873-2047146 80.5 1.4e-22 1
CP000449_2900 CDS_3197517-3196378 79.2 3.1e-22 1
CP000449_2061 CDS_2244127-2245845 72.7 2.2e-20 1
CP000449_0974 CDS_1074383-1075705 71.6 4.5e-20 1
CP000449_2607 CDS_2837202-2835538 66.5 1.3e-18 1
CP000449_0080 CDS_79152-81641 64.0 6.3e-18 1
CP000449_0075 CDS_73718-75340 64.0 6.5e-18 1
CP000449_0898 CDS_995641-996765 52.1 1.5e-14 1
CP000449_0899 CDS_996770-998968 52.0 1.6e-14 1
CP000449_0777 CDS_877205-879529 50.1 5.8e-14 1
CP000449_2597 CDS_2822110-2825544 49.9 6.3e-14 1
CP000449_0941 CDS_1039739-1041172 49.4 8.5e-14 1
CP000449_1439 CDS_1581441-1583702 48.8 1.3e-13 1
CP000449_0762 CDS_864124-862808 45.4 1.2e-12 1
CP000449_2688 CDS_2957683-2959470 42.2 9.5e-12 1
CP000449_1925 CDS_2110988-2108427 37.2 2.6e-10 1
CP000449_2735 CDS_3024474-3022843 36.6 3.8e-10 1
CP000449_2849 CDS_3152470-3151145 33.5 2.9e-09 1
CP000449_1437 CDS_1579104-1580153 31.2 1.2e-08 1
CP000449_0778 CDS_879557-880516 29.6 3.6e-08 1
CP000449_0458 CDS_536055-537521 27.2 1.7e-07 1
CP000449_2521 CDS_2755006-2757648 26.8 2.2e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000449_0712 1/1 160 225 .. 1 87 [] 99.6 5.1e-28
CP000449_2214 1/1 688 753 .. 1 87 [] 95.1 9.6e-27
CP000449_0947 1/1 619 688 .. 1 87 [] 93.1 3.6e-26
CP000449_2511 1/1 214 279 .. 1 87 [] 91.5 1e-25
CP000449_0896 1/1 300 368 .. 1 87 [] 89.8 3.2e-25
CP000449_2190 1/1 476 541 .. 1 87 [] 89.1 4.8e-25
CP000449_2123 1/1 423 488 .. 1 87 [] 88.9 5.5e-25
CP000449_2115 1/1 214 280 .. 1 87 [] 85.6 4.9e-24
CP000449_3003 1/1 171 236 .. 1 87 [] 84.5 1e-23
CP000449_0633 1/1 296 361 .. 1 87 [] 83.7 1.7e-23
CP000449_0475 1/1 174 241 .. 1 87 [] 82.0 5.1e-23
CP000449_1870 1/1 203 268 .. 1 87 [] 80.5 1.4e-22
CP000449_2900 1/1 149 214 .. 1 87 [] 79.2 3.1e-22
CP000449_2061 1/1 177 243 .. 1 87 [] 72.7 2.2e-20
CP000449_0974 1/1 212 277 .. 1 87 [] 71.6 4.5e-20
CP000449_2607 1/1 172 237 .. 1 87 [] 66.5 1.3e-18
CP000449_0080 1/1 582 650 .. 1 87 [] 64.0 6.3e-18
CP000449_0075 1/1 307 372 .. 1 87 [] 64.0 6.5e-18
CP000449_0898 1/1 157 224 .. 1 87 [] 52.1 1.5e-14
CP000449_0899 1/1 504 572 .. 1 87 [] 52.0 1.6e-14
CP000449_0777 1/1 545 613 .. 1 87 [] 50.1 5.8e-14
CP000449_2597 1/1 916 984 .. 1 87 [] 49.9 6.3e-14
CP000449_0941 1/1 245 311 .. 1 87 [] 49.4 8.5e-14
CP000449_1439 1/1 516 587 .. 1 87 [] 48.8 1.3e-13
CP000449_0762 1/1 235 293 .. 1 87 [] 45.4 1.2e-12
CP000449_2688 1/1 228 293 .. 1 87 [] 42.2 9.5e-12
CP000449_1925 1/1 470 536 .. 1 87 [] 37.2 2.6e-10
CP000449_2735 1/1 156 218 .. 1 87 [] 36.6 3.8e-10
CP000449_2849 1/1 216 282 .. 1 87 [] 33.5 2.9e-09
CP000449_1437 1/1 127 173 .. 7 74 .. 31.2 1.2e-08
CP000449_0778 1/1 82 150 .. 1 87 [] 29.6 3.6e-08
CP000449_0458 1/1 265 329 .. 1 87 [] 27.2 1.7e-07
CP000449_2521 1/1 642 710 .. 1 87 [] 26.8 2.2e-07

Alignments of top-scoring domains:
CP000449_0712: domain 1 of 1, from 160 to 225: score 99.6, E = 5.1e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL++++g ++lL++ t+l++eq
CP000449_0 160 AKSDFLATMSHEIRTPLNGVLGVTQLLQA---------TTLDAEQ-- 195

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++++i+++++ llrL+nd+Ldls+ieag
CP000449_0 196 ----------AEFVRVIDDSGKILLRLLNDILDLSKIEAG 225

CP000449_2214: domain 1 of 1, from 688 to 753: score 95.1, E = 9.6e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTPL++++g++++L + tel+e+q
CP000449_2 688 AKSQFLANMSHEIRTPLNGVLGMTQVLHM---------TELTEQQ-- 723

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +eti+++++ l +Li+d+Ld+s+ie+g
CP000449_2 724 ----------SRHVETIRSSGQALADLIDDILDISKIESG 753

CP000449_0947: domain 1 of 1, from 619 to 688: score 93.1, E = 3.6e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+kseflan+sHELRTPL+aI g++e++ e++ ++l+++
CP000449_0 619 SKSEFLANMSHELRTPLNAINGFSEIMMQEMF------GPLGDDR-- 657

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y y + il+++++ll+Lind+Ld+s+ieag
CP000449_0 658 ---------YVGYMKDILSSGRHLLELINDILDMSKIEAG 688

CP000449_2511: domain 1 of 1, from 214 to 279: score 91.5, E = 1e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla +sHE+RTPL++++g+a L++ t+l+e q
CP000449_2 214 AKTDFLAQMSHEIRTPLNGVLGMARGLRD---------TPLDEGQ-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++ti ++++ ll+ +nd+Ldls+ieag
CP000449_2 250 ----------VEMVSTICSSGDLLLSVVNDVLDLSKIEAG 279

CP000449_0896: domain 1 of 1, from 300 to 368: score 89.8, E = 3.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL+aI+g++++++++l+ ++l++
CP000449_0 300 AKSQFLASVSHELRTPLNAIIGFSDVMKARLF------GPLPARY-- 338

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey + i++++++l +Li d+Ld+s+iea
CP000449_0 339 ----------AEYADLIHESGQHLMELIGDVLDMSKIEAD 368

CP000449_2190: domain 1 of 1, from 476 to 541: score 89.1, E = 4.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTPL++I+g+a++L++ t +s +
CP000449_2 476 AKSTFLANISHEIRTPLNGILGLAQVLRT---------TSRSKQR-- 511

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + i++++e l +L+nd+Ld+s+ieag
CP000449_2 512 ----------QDQARMIEESGETLTQLLNDVLDMSKIEAG 541

CP000449_2123: domain 1 of 1, from 423 to 488: score 88.9, E = 5.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP+++I+g+a +L + +l+++
CP000449_2 423 AKSDFLANMSHEIRTPMNGILGMARVLAD---------KDLPDDV-- 458

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i r+++ l +L++d+Ldls+ieag
CP000449_2 459 ----------NSKLDVIVRSGDTLMHLLDDILDLSKIEAG 488

CP000449_2115: domain 1 of 1, from 214 to 280: score 85.6, E = 4.9e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f+an+sHE RTPL++++g++ +L++ d++l++e+
CP000449_2 214 AKSDFIANMSHEVRTPLNGVLGMTNVLQA--------DATLTDEH-- 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l i+++++ ll+L+nd+Ldls+iea
CP000449_2 251 ----------RRSLGLIDDSGKALLDLLNDILDLSKIEAD 280

CP000449_3003: domain 1 of 1, from 171 to 236: score 84.5, E = 1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a++ HELRTPL++ +g + lL+ t+l ++q
CP000449_3 171 AKSLFFAAVTHELRTPLAGALGVSRLLEG---------TALKPDQ-- 206

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+++i +a++ l++++d+Ldlsr+eag
CP000449_3 207 ----------ADYVRSIAASADHALAMVDDILDLSRLEAG 236

CP000449_0633: domain 1 of 1, from 296 to 361: score 83.7, E = 1.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE RTP+++++g++ lL + t+l + q
CP000449_0 296 AKSRFLATMSHEVRTPMNGVLGMSALLAT---------TDLEPSQ-- 331

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ i+ +++ ll ++nd+Ldl+ ie+g
CP000449_0 332 ----------REMVNLIEGSGQALLTILNDILDLANIESG 361

CP000449_0475: domain 1 of 1, from 174 to 241: score 82.0, E = 5.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +flan+sHELRTPL+++ g++e+L+ +++++++++
CP000449_0 174 MRADFLANASHELRTPLASLAGFIETLRG---------HAKDDPEAR 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l ++ +++er++rLindlL lsr e
CP000449_0 212 ----------ERFLGIMFDQTERMQRLINDLLSLSRVEMD 241

CP000449_1870: domain 1 of 1, from 203 to 268: score 80.5, E = 1.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksefla++sHE+RTPL++++g+a +L + + l ++q
CP000449_1 203 VKSEFLATVSHEIRTPLNGVLGMARVLDD---------GSLRPDQ-- 238

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ i r++e ll+ +nd+Ldlsrie+g
CP000449_1 239 ----------SDQVQAITRSGEVLLSTLNDVLDLSRIEEG 268

CP000449_2900: domain 1 of 1, from 149 to 214: score 79.2, E = 3.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++sef+ +lsHELRTPL++I+g++ lL + t+l++ q
CP000449_2 149 SRSEFILGLSHELRTPLNGILGLSGLLAN---------TDLDPSQ-- 184

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l t++r+a+ +l+ ++d+ dl+r+e++
CP000449_2 185 ----------RKLLATVERSAQAMLARVSDVFDLARLENN 214

CP000449_2061: domain 1 of 1, from 177 to 243: score 72.7, E = 2.2e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+ HE RTPL++++g+a+++ + ls++q
CP000449_2 177 AKSEFLANVGHEVRTPLNGMLGMADVMHQ--------VGGLSPDQ-- 213

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ i++++ ll+L+n++Ld s+ie+g
CP000449_2 214 ----------DERLQLIRDSGATLLELLNEILDQSKIETG 243

CP000449_0974: domain 1 of 1, from 212 to 277: score 71.6, E = 4.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+eflan sHELRTPL++I+g + +L+ + ++e+
CP000449_0 212 SKTEFLANTSHELRTPLNGILGGVTILRL---------GVGPAET-- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ti+r++++ll+ in +Ld + ++ g
CP000449_0 248 ----------TEWLDTIDRSGRSLLHTINAILDAAALQDG 277

CP000449_2607: domain 1 of 1, from 172 to 237: score 66.5, E = 1.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTP+++++g+++l+++ + d+ l++e
CP000449_2 172 AKSAFLANMSHEIRTPMNGVLGLLDLARN------GPDGRLDAEG-- 210

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ t++ +a l +nd+Ld s++++g
CP000449_2 211 -------------VVTAHASATALVTVLNDILDVSKLDQG 237

CP000449_0080: domain 1 of 1, from 582 to 650: score 64.0, E = 6.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef+ ++s +LRTPLt+I gya++L ++ +els+ q
CP000449_0 582 IKTEFVEHVSYQLRTPLTTIGGYADMLAQGFA------GELSDRQ-- 620

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e + i+++a +l +Li+d+Ld + i+ag
CP000449_0 621 ----------KEPMSAIQSAAAHLAKLIDDILDVAAIDAG 650

CP000449_0075: domain 1 of 1, from 307 to 372: score 64.0, E = 6.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a+++HEL++PLt+Ir ++e+L + ++++e r
CP000449_0 307 AIESFAADVAHELKNPLTSIRSAVEVLPK----------AKDAERR- 342

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +i ++ rl+rLi d+ sr +a+
CP000449_0 343 ----------DRLLAVITADVGRLDRLITDISRASRVDAE 372

CP000449_0898: domain 1 of 1, from 157 to 224: score 52.1, E = 1.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ef+ n++H+L+ PL++I g+a lL + + ++ s++
CP000449_0 157 AMREFAFNAAHDLKSPLNGITGFAALLAKAV-------DDVSPQA-- 194

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ ++i+ ++ + ++i+ +Ld++ +++
CP000449_0 195 ----------REFASKIRTQGLKMAEMIDSMLDYAIAGEA 224

CP000449_0899: domain 1 of 1, from 504 to 572: score 52.0, E = 1.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ +sH+L+ P+ +Ir +a+ L+ ++ ++ls +
CP000449_0 504 ELDSFVYLASHDLKSPMRGIRQLADWLEQDMA------ENLSNDA-- 542

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yle i++ + rl++L++ lLd+sri+ +
CP000449_0 543 ----------RRYLELIHSRIGRLQDLLDALLDFSRIGRN 572

CP000449_0777: domain 1 of 1, from 545 to 613: score 50.1, E = 5.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ ++sH+L PL I+++ e L ++ + ++l+e
CP000449_0 545 ELQEFAYAASHDLQEPLRKIQAFGERLNNKCY------DALDETG-- 583

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yle++ +++ r++rLi+dlL +sr +
CP000449_0 584 ----------RHYLERMVDASTRMRRLIDDLLSYSRVNSK 613

CP000449_2597: domain 1 of 1, from 916 to 984: score 49.9, E = 6.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L PL + ++++l ++++ +++l+e+
CP000449_2 916 ELDRFATVASHDLQEPLRKVAAFSSLVRRRY------SDKLDEDG-- 954

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ + ++aer++rLin+lL +s++ ++
CP000449_2 955 ----------ARSLDYLADAAERMQRLINELLSYSKLASQ 984

CP000449_0941: domain 1 of 1, from 245 to 311: score 49.4, E = 8.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +++H+LRTPLt +r ++ +l+ ++ ++++r
CP000449_0 245 RMRHTGDSIAHDLRTPLTRMRNRLDEALR---------EDGDADTR- 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le++ +++ ll + n +L lsr+eag
CP000449_0 282 ----------EQALERAVADTDELLGIFNAILSLSRLEAG 311

CP000449_1439: domain 1 of 1, from 516 to 587: score 48.8, E = 1.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e ++ ++HE+++PLt I++ ae +++++ ++e s++
CP000449_1 516 AWREVARRIAHEIKNPLTPIQLSAERIKRKY------RAEISSDL-- 554

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +eti+r++ + r+++++ ++r+ ++
CP000449_1 555 -------ETFDRCTETIIRQVSDIGRMVDEFSSFARMPQP 587

CP000449_0762: domain 1 of 1, from 235 to 293: score 45.4, E = 1.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +++ + l+
CP000449_0 235 QRTALLAGVSHDLRTPLTRLKLQLALMPQ------------------ 263

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++r+++ +++++++ Ld++r +
CP000449_0 264 ----------TGETADARRDLDEMEAMLDEYLDFARGDGS 293

CP000449_2688: domain 1 of 1, from 228 to 293: score 42.2, E = 9.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+fla+ sH++ +PL a ++++ ++++ +l+ +++
CP000449_2 228 SKSRFLAATSHDMSQPLQAQSFFITAMRR----------TLNQPDQ- 263

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l++i+ + ++ ++L++ l + +r+++g
CP000449_2 264 ----------VEMLDKIEGCWRSQQQLLQALVETARLDSG 293

CP000449_1925: domain 1 of 1, from 470 to 536: score 37.2, E = 2.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lta+r++++ Ll+ +++ ++++
CP000449_1 470 AVGQLAGGVAHDFNNLLTAVRLNCDELLN--------RHPVGDPD-- 506

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i + + r L++ lL +sr ++
CP000449_1 507 ----------YSELQSINQTVARAAGLVRKLLAFSRKQTF 536

CP000449_2735: domain 1 of 1, from 156 to 218: score 36.6, E = 3.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++++++H++ + LtaI + a lL++ ++ s+++
CP000449_2 156 ALGRMASSVAHDFANILTAINASARLLRN---------SNTSPKD-- 191

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++++i + ++ ++L++dl +a
CP000449_2 192 ----------ELMFDRIVTSCRQANDLVDDL---VTFDAT 218

CP000449_2849: domain 1 of 1, from 216 to 282: score 33.5, E = 2.9e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ + a+++HEL TPL++I+++a+ +l+ e ++ ++l
CP000449_2 216 ALGALSAAAAHELGTPLATIQLTAKEMLR----------EIGAGTAL 252

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e e + +a+r+++++ +l + + +
CP000449_2 253 ----------SEDAELLVTQARRCRDILKRLGEVQEASDE 282

CP000449_1437: domain 1 of 1, from 127 to 173: score 31.2, E = 1.2e-08
*->anlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLRle
++l+HEL++PL+++rg+a+l+++ ++ e
CP000449_1 127 RMLAHELKNPLASVRGAAQLIRR---------ETELEGA-------- 156

dpeyreyletilreaerllrL<-*
r++ + i+++++r+ rL
CP000449_1 157 ----RDLARLIIQDVDRITRL 173

CP000449_0778: domain 1 of 1, from 82 to 150: score 29.6, E = 3.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
f+ +++H+LR PL I+++ e L+e l ++ ++ ++
CP000449_0 82 DVALFAVAARHDLREPLRKIITFGERLRESL-------GPVPDAHQ- 120

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y e++ ++aer++ L+++l sri
CP000449_0 121 ----------DRYAERMSDAAERMQGLLDELSVHSRINDS 150

CP000449_0458: domain 1 of 1, from 265 to 329: score 27.2, E = 1.7e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ +a + H+LR+ L++ ++ ++ L + ++++
CP000449_0 265 ALGGAVARINHDLRNVLASAQLVSDRLAM----------DADDRV-- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + e++ r+++r rL + L++ r+e+
CP000449_0 300 ----------RGMGERLVRAVDRGVRLCEATLEFGRAEES 329

CP000449_2521: domain 1 of 1, from 642 to 710: score 26.8, E = 2.2e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL I+ ++ lL + ++l+e
CP000449_2 642 ELERFAFAASHDLQEPLRLISNFTGLLAS------RHGDKLDESG-- 680

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl+ l+++ r++ Li dlL + r+ +
CP000449_2 681 ----------LTYLRHTLDATARMQTLITDLLAYGRLNSD 710


Histogram of all scores:
score obs exp (one = represents 11 sequences)
----- --- ---
-14 3 0|=
-13 19 2|*=
-12 78 70|======*=
-11 247 363|======================= *
-10 510 673|=============================================== *
-9 613 695|======================================================== *
-8 569 520|===============================================*====
-7 405 328|=============================*=======
-6 217 188|=================*==
-5 171 103|=========*======
-4 89 55|====*====
-3 54 29|==*==
-2 26 15|=*=
-1 12 8|*=
0 8 4|*
1 3 2|*
2 2 1|*
3 1 0|=
4 1 0|=
5 1 0|=
> 6 34 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 208.4327
P(chi-square) = 1.319e-38

Total sequences searched: 3063

Whole sequence top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 34K


Acknowledgements:

This research is funded by:

Developed by: