Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Aeromonas hydrophila subsp. hydrophila ATCC 7966  

Data for CP000462  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000462.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000462_0395 CDS_446607-443941 100.0 5.3e-28 1
CP000462_2361 CDS_2675184-2672383 97.4 3e-27 1
CP000462_0787 CDS_876287-873576 93.3 4.4e-26 1
CP000462_0874 CDS_978610-982887 90.0 3.7e-25 1
CP000462_2162 CDS_2448084-2451266 86.6 3.5e-24 1
CP000462_2130 CDS_2413968-2409997 86.2 4.4e-24 1
CP000462_0989 CDS_1104414-1107842 83.9 1.9e-23 1
CP000462_0060 CDS_68963-72550 83.4 2.8e-23 1
CP000462_2261 CDS_2566457-2562534 78.4 7.1e-22 1
CP000462_1213 CDS_1365051-1366346 76.6 2.3e-21 1
CP000462_2931 CDS_3390494-3393763 76.5 2.4e-21 1
CP000462_0871 CDS_974238-976550 75.2 5.7e-21 1
CP000462_3010 CDS_3487862-3491341 74.6 8.6e-21 1
CP000462_0014 CDS_15857-13269 73.4 1.9e-20 1
CP000462_1533 CDS_1727358-1729331 67.1 1.1e-18 1
CP000462_3904 CDS_4498859-4497459 67.0 1.3e-18 1
CP000462_4092 CDS_4712455-4713876 66.5 1.7e-18 1
CP000462_0256 CDS_299737-298682 63.7 1.1e-17 1
CP000462_0729 CDS_811306-810083 55.5 2.3e-15 1
CP000462_1281 CDS_1438361-1439419 54.5 4.2e-15 1
CP000462_2747 CDS_3174693-3173659 54.5 4.4e-15 1
CP000462_0176 CDS_205727-204372 54.2 5.1e-15 1
CP000462_2992 CDS_3472100-3470007 53.5 8e-15 1
CP000462_3817 CDS_4398463-4397072 53.0 1.1e-14 1
CP000462_0941 CDS_1051947-1055447 51.7 2.7e-14 1
CP000462_0287 CDS_332859-334160 50.8 4.9e-14 1
CP000462_3132 CDS_3639115-3640554 42.5 1.1e-11 1
CP000462_4034 CDS_4641139-4642464 41.2 2.5e-11 1
CP000462_0411 CDS_464431-463220 41.1 2.7e-11 1
CP000462_3197 CDS_3705108-3707192 36.9 4.1e-10 1
CP000462_0028 CDS_34458-36890 33.5 3.7e-09 1
CP000462_0127 CDS_152169-150754 31.9 1.1e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000462_0395 1/1 157 222 .. 1 87 [] 100.0 5.3e-28
CP000462_2361 1/1 279 344 .. 1 87 [] 97.4 3e-27
CP000462_0787 1/1 290 355 .. 1 87 [] 93.3 4.4e-26
CP000462_0874 1/1 827 892 .. 1 87 [] 90.0 3.7e-25
CP000462_2162 1/1 348 413 .. 1 87 [] 86.6 3.5e-24
CP000462_2130 1/1 711 776 .. 1 87 [] 86.2 4.4e-24
CP000462_0989 1/1 561 626 .. 1 87 [] 83.9 1.9e-23
CP000462_0060 1/1 705 771 .. 1 87 [] 83.4 2.8e-23
CP000462_2261 1/1 761 826 .. 1 87 [] 78.4 7.1e-22
CP000462_1213 1/1 205 270 .. 1 87 [] 76.6 2.3e-21
CP000462_2931 1/1 704 770 .. 1 87 [] 76.5 2.4e-21
CP000462_0871 1/1 282 347 .. 1 87 [] 75.2 5.7e-21
CP000462_3010 1/1 487 554 .. 1 87 [] 74.6 8.6e-21
CP000462_0014 1/1 633 701 .. 1 87 [] 73.4 1.9e-20
CP000462_1533 1/1 292 357 .. 1 87 [] 67.1 1.1e-18
CP000462_3904 1/1 246 314 .. 1 87 [] 67.0 1.3e-18
CP000462_4092 1/1 255 320 .. 1 87 [] 66.5 1.7e-18
CP000462_0256 1/1 131 196 .. 1 87 [] 63.7 1.1e-17
CP000462_0729 1/1 190 253 .. 1 87 [] 55.5 2.3e-15
CP000462_1281 1/1 134 198 .. 1 87 [] 54.5 4.2e-15
CP000462_2747 1/1 122 188 .. 1 87 [] 54.5 4.4e-15
CP000462_0176 1/1 237 299 .. 1 87 [] 54.2 5.1e-15
CP000462_2992 1/1 444 511 .. 1 87 [] 53.5 8e-15
CP000462_3817 1/1 259 317 .. 1 87 [] 53.0 1.1e-14
CP000462_0941 1/1 790 856 .. 1 87 [] 51.7 2.7e-14
CP000462_0287 1/1 220 280 .. 1 87 [] 50.8 4.9e-14
CP000462_3132 1/1 258 323 .. 1 87 [] 42.5 1.1e-11
CP000462_4034 1/1 211 272 .. 1 87 [] 41.2 2.5e-11
CP000462_0411 1/1 212 278 .. 1 87 [] 41.1 2.7e-11
CP000462_3197 1/1 428 502 .. 1 87 [] 36.9 4.1e-10
CP000462_0028 1/1 571 639 .. 1 87 [] 33.5 3.7e-09
CP000462_0127 1/1 270 328 .. 1 87 [] 31.9 1.1e-08

Alignments of top-scoring domains:
CP000462_0395: domain 1 of 1, from 157 to 222: score 100.0, E = 5.3e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP++aI+g+++l+l t l+++q
CP000462_0 157 AKSDFLANMSHEIRTPMNAILGMSHLALQ---------TRLDPQQ-- 192

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y+++i+r+a++ll +ind+Ld+s+ieag
CP000462_0 193 ----------FDYVSKIQRSAQHLLGIINDILDFSKIEAG 222

CP000462_2361: domain 1 of 1, from 279 to 344: score 97.4, E = 3e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP++aI+g+++l+l tel+ +q
CP000462_2 279 AKSDFLANMSHEIRTPMNAIIGFSSLALQ---------TELDQQQ-- 314

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl++i+++++ ll Lind+Ldl++ e+g
CP000462_2 315 ----------RDYLSKIKSSSDTLLLLINDILDLTKVESG 344

CP000462_0787: domain 1 of 1, from 290 to 355: score 93.3, E = 4.4e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++g++ Ll+ t l++ q
CP000462_0 290 VKSEFLANMSHELRTPLNGVIGFTRQLLK---------TSLTPSQ-- 325

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y +ti+++a+ ll +ind+Ld+s++eag
CP000462_0 326 ----------TDYMQTIEKSARNLLGIINDILDFSKLEAG 355

CP000462_0874: domain 1 of 1, from 827 to 892: score 90.0, E = 3.7e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s+fla++sHELRTP++++ g++elL++ +el+++q
CP000462_0 827 VRSRFLATMSHELRTPISGMHGMLELLQM---------SELNDDQ-- 862

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+ + +++ ll L+nd+Ld+s+ieag
CP000462_0 863 ----------RYLLRNVVTSTNNLLYLVNDVLDFSKIEAG 892

CP000462_2162: domain 1 of 1, from 348 to 413: score 86.6, E = 3.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+an+sHE+RTP++aI+g+a lL+ + l++ q
CP000462_2 348 VKGDFIANMSHEIRTPMNAIMGLAYLLEQ---------GGLDDGQ-- 383

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++++i+++++ ll +ind+Ld+s+ie+g
CP000462_2 384 ----------RALVRKIHQAGQALLGIINDILDFSKIESG 413

CP000462_2130: domain 1 of 1, from 711 to 776: score 86.2, E = 4.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTP++aI+g++ lL++ ++ + q
CP000462_2 711 AKSAFLANMSHEIRTPMNAILGLTYLLKR---------DTPDHTQ-- 746

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le+i+++a++ll +ind+Ldls+i+ag
CP000462_2 747 ----------QDRLEKIDNAAQHLLTIINDILDLSKIDAG 776

CP000462_0989: domain 1 of 1, from 561 to 626: score 83.9, E = 1.9e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +fla++sHE+RTP+++I+g+ae L+ t l++eq
CP000462_0 561 QKADFLATMSHEIRTPMNGIIGMAEQLRF---------TSLDPEQ-- 596

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++ +i + ae ll+Li ++Ld+s+++ag
CP000462_0 597 ----------RQMVGIINQGAEGLLQLIGNVLDYSKLDAG 626

CP000462_0060: domain 1 of 1, from 705 to 771: score 83.4, E = 2.8e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP++aI+g++el l+ ++ l ee+
CP000462_0 705 AKSTFLATMSHEIRTPMNAIIGLLELTLR--------RDRLHEED-- 741

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++++ +a+ ll+Li d+Ld+s+ie+g
CP000462_0 742 ----------KTSLSIAHGSAKDLLSLIGDILDISKIESG 771

CP000462_2261: domain 1 of 1, from 761 to 826: score 78.4, E = 7.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla++sHE+RTP++aI+g++e L t l++eq
CP000462_2 761 AKGRFLAAVSHEIRTPMNAILGLLEWLSH---------TSLNAEQ-- 796

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l ++++++ ll L+nd+Ld+sr e+
CP000462_2 797 ----------RSALAHVRQAGDELLGLLNDVLDFSRNENR 826

CP000462_1213: domain 1 of 1, from 205 to 270: score 76.6, E = 2.3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f++n+sHELRTPLt+++gy+e+ +e +++ +
CP000462_1 205 TRKHFVSNVSHELRTPLTVLKGYLEMTEE------------PPPPA- 238

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ +++ +++ r+++L+n+lL+lsriea
CP000462_1 239 --------MWAKAHKVMMEQTIRMDNLVNQLLTLSRIEAA 270

CP000462_2931: domain 1 of 1, from 704 to 770: score 76.5, E = 2.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTP++aI+g++el+ d++l + +
CP000462_2 704 AKSDFLATMSHEIRTPMNAILGMLELASQ--------DPALAPYT-- 740

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+++ ++a+ ll+Li d+Ld+s ie+g
CP000462_2 741 ----------GEQLRIASESANGLLDLIGDVLDISSIESG 770

CP000462_0871: domain 1 of 1, from 282 to 347: score 75.2, E = 5.7e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ f++++sHELRTPL++I g++ +L + t+l+++q
CP000462_0 282 DKTTFISTISHELRTPLNGIVGLSRMLMD---------TPLDPKQ-- 317

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ti+ +a l ++ nd+ dl +++
CP000462_0 318 ----------HQQLKTIHLSAVTLGNIFNDIIDLDKLDRR 347

CP000462_3010: domain 1 of 1, from 487 to 554: score 74.6, E = 8.6e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+e+lan sHELRTP+++I+g+ae +l+ + ++l+e q
CP000462_3 487 LKDELLANTSHELRTPIHGIKGMAESMLASQ-------QDLTEGQ-- 524

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l i+++a+ l rL++dlLd+ +++ g
CP000462_3 525 ----------QKQLGLIIKSADGLARLVDDLLDYHQMRYG 554

CP000462_0014: domain 1 of 1, from 633 to 701: score 73.4, E = 1.9e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +l+++sH+L+TPL++I+g+ ++Lle++ + s+e+r
CP000462_0 633 MRAALLSSVSHDLKTPLATIMGAGSTLLEYG-------DRISSEDR- 671

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+++++ea+rl + +++lLd++ri+++
CP000462_0 672 ----------SELLHSVQDEARRLHSYVQNLLDMTRIGSP 701

CP000462_1533: domain 1 of 1, from 292 to 357: score 67.1, E = 1.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++ HE+R P++a++g+++lL+ + l ++q
CP000462_1 292 AKSQFLAMMTHEIRSPMNAVLGMLDLLQH---------AQLEPQQ-- 327

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l + ++a+ l+ +i+d+Ld+s+ie+
CP000462_1 328 ----------QTLLGHATHAARLLQTIIDDVLDFSKIESH 357

CP000462_3904: domain 1 of 1, from 246 to 314: score 67.0, E = 1.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +fl+++sHEL+TPL+++r a+lL e+l ++l+++q
CP000462_3 246 QKYQFLRHVSHELKTPLAVLREGADLLSEQL------VGPLTPDQ-- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ + +++ ++rl+ Li++lLd+ r+ ++
CP000462_3 285 ----------QEICQMLEENSRRLQTLIERLLDFNRLSQQ 314

CP000462_4092: domain 1 of 1, from 255 to 320: score 66.5, E = 1.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +l HEL+ PL+aIrg+ e+L e t+ +e
CP000462_4 255 YIEDYVHSLTHELKSPLAAIRGAGEILAE---------TPPPEVA-- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++ i e+ r+++Li+++L+l+r+e+g
CP000462_4 291 ----------RRFIGNINLETARMQQLIERMLQLARLESG 320

CP000462_0256: domain 1 of 1, from 131 to 196: score 63.7, E = 1.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a e++++l+HE+++PL ++rg+a+lL++ el+++ +
CP000462_0 131 AAKELVRGLAHEIKNPLGGLRGAAQLLQK----------ELPDPAL- 166

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey+ +i+++a+rl+ L+++lL r +
CP000462_0 167 ----------REYTGIIIEQADRLRVLVDRLLGPQRPGRH 196

CP000462_0729: domain 1 of 1, from 190 to 253: score 55.5, E = 2.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l ++sHELR PL+ +++++ l++ ++ r
CP000462_0 190 SREQLLHDVSHELRSPLARLQLAIGLAQQ-------------DPAR- 222

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le+i+ e++r++++i +lL+l+r+++g
CP000462_0 223 ---------IEGSLERIQLETQRMDKMIGELLTLTRAGHG 253

CP000462_1281: domain 1 of 1, from 134 to 198: score 54.5, E = 4.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ + a+++HELRTP+t +rg ++ L e+++ +++
CP000462_1 134 EREFWNAAIAHELRTPVTILRGRLQGLAEGVF----------PPE-- 168

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++e +lr++e l +Li+dl+ ls ++g
CP000462_1 169 ----------RSLFEGLLRQVEGLTHLIEDLRVLSLNDSG 198

CP000462_2747: domain 1 of 1, from 122 to 188: score 54.5, E = 4.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++a+l+H++RTPL+a ++ya L + +l +e r
CP000462_2 122 ALGNMAASLAHQIRTPLSAAMLYAANLAN---------RTLKPESR- 158

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++ ++ l+++i+d+L ++r + +
CP000462_2 159 ----------SQFQQKLMARLQDLEKQISDILLFARNGDN 188

CP000462_0176: domain 1 of 1, from 237 to 299: score 54.2, E = 5.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++l+++sHELR PLt I+++ l+++ ++ +
CP000462_0 237 KQKQLLSDISHELRSPLTRIQLAQALIRR---------KQGDSNE-- 272

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +i++e+ rl++Li dlLdlsr ++
CP000462_0 273 -------------LVRIESEIGRLDKLIGDLLDLSRVQQH 299

CP000462_2992: domain 1 of 1, from 444 to 511: score 53.5, E = 8e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e+ a+++HE+++PL++I+g++el++ el +e+ e+
CP000462_2 444 ALGELCAGVAHEINNPLAVILGNVELMKLEL-------GEAAEPV-- 481

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l +l ++er++++ + lL++sr +
CP000462_2 482 ----------SEELALVLAQIERIRAITRSLLQYSRPGDY 511

CP000462_3817: domain 1 of 1, from 259 to 317: score 53.0, E = 1.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++la++sH+LRTP+t++r+ +e L e
CP000462_3 259 DRTRMLAAISHDLRTPITSLRLRTEFLDE------------------ 287

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e e+i++ ++++++++ L ++r e +
CP000462_3 288 ----------GEDKERIQQTLQQMEQMLAATLSFAREEGQ 317

CP000462_0941: domain 1 of 1, from 790 to 856: score 51.7, E = 2.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+fla++sH+L +PL+a +++++ Lle l++ + +
CP000462_0 790 SKSRFLAAVSHDLTQPLNAAKLFTSSLLE----------MLPPMDEP 826

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + i++++ ++Li dlLd+sr+eag
CP000462_0 827 ----------ARIARHIDDALGATEDLITDLLDISRLEAG 856

CP000462_0287: domain 1 of 1, from 220 to 280: score 50.8, E = 4.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a++sH+LRTPLt Ir+++e++ ++
CP000462_0 220 ERNLMMAGVSHDLRTPLTRIRLATEMMSS---------GD------- 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e+i +++ + +i+++ d+ r ++g
CP000462_0 251 ----------EYLKESINADIDESNGIIDQFIDYIRPDEG 280

CP000462_3132: domain 1 of 1, from 258 to 323: score 42.5, E = 1.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f+ ++HELRTPL+++r ++e +l+ + ++e r
CP000462_3 258 REKQFTNEAAHELRTPLAVLRIHSENALA----------AEDAESR- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+++l +++r +rL+++lL+ +ri+++
CP000462_3 294 ----------QHSLQKMLLALDRSDRLLRQLLTQARIDNQ 323

CP000462_4034: domain 1 of 1, from 211 to 272: score 41.2, E = 2.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +++ +++HELRTPL +r + +L ++ eeq
CP000462_4 211 SRKQLTDAIAHELRTPLVRLRYRLAMLDP---------APSAEEQ-- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++r++ l++Li+++L+++r++ +
CP000462_4 247 --------------QGLERDLGALDALIEEMLTYARLDRP 272

CP000462_0411: domain 1 of 1, from 212 to 278: score 41.1, E = 2.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +ef + +sHELRTP +I+g a lL + ++l+++
CP000462_0 212 REQEFSRFASHELRTPNMVIQGSAALLGK--------VSDLPAPA-- 248

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +i+ +a+ + L + +L l r e
CP000462_0 249 ----------ARATTRIRAAADEMALLTETFLLLGRKEPV 278

CP000462_3197: domain 1 of 1, from 428 to 502: score 36.9, E = 4.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
+++e+ an++HE+++PL+aI y++ +l +ldk+ + +++ +
CP000462_3 428 ELGELGANVAHEINQPLSAIANYSQGALLRLDKLaQDPAQAAAQASL 474

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++le i +++r+ + +n+l +r++
CP000462_3 475 -----------RQALEQIGLQVQRITQTVNRL--RARLQKR 502

CP000462_0028: domain 1 of 1, from 571 to 639: score 33.5, E = 3.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +l+HEL++PL+a+++y+ + ++ +l q l
CP000462_0 571 VVGQAMTSLAHELNQPLSAMMTYLYTSRT----------ALATGQ-L 606

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+L + l ++++ ++r++r+in l+ ++r
CP000462_0 607 QAL-------DQDLGRLDKLGRRMSRIINALRHFARKSPA 639

CP000462_0127: domain 1 of 1, from 270 to 328: score 31.9, E = 1.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++++sH+L+TP+t +r+ +elL +
CP000462_0 270 DRERLFSSISHDLKTPITRLRLRVELLDD------------------ 298

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + + ++++ l+ ++ L+ +
CP000462_0 299 ----------EQQIAKFNKDLDELELMVKGALQTVKDTDI 328


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-16 2 0|=
-15 3 0|=
-14 4 0|=
-13 37 3|*==
-12 142 94|======*====
-11 332 488|======================== *
-10 662 906|================================================ *
-9 743 936|====================================================== *
-8 777 700|=================================================*======
-7 538 441|===============================*=======
-6 351 254|==================*=======
-5 210 139|=========*=====
-4 112 74|=====*==
-3 67 39|==*==
-2 46 20|=*==
-1 31 10|*==
0 8 5|*
1 10 2|*
2 4 1|*
3 6 0|=
4 0 0|
5 0 0|
6 1 0|=
7 0 0|
8 1 0|=
> 9 35 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 389.7538
P(chi-square) = 0

Total sequences searched: 4122

Whole sequence top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 33K


Acknowledgements:

This research is funded by:

Developed by: