Acidobacteria Actinobacteria Alphaproteobacteria
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Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
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Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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132 projects found  

1 accessions found for Rhodopseudomonas palustris BisA53  

Data for CP000463  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000463.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000463_1361 CDS_1540128-1542764 98.2 2.1e-27 1
CP000463_0360 CDS_400780-403029 91.7 1.5e-25 1
CP000463_2270 CDS_2532277-2534466 90.7 2.7e-25 1
CP000463_1195 CDS_1358896-1362015 90.4 3.4e-25 1
CP000463_1934 CDS_2168259-2165944 88.5 1.1e-24 1
CP000463_1859 CDS_2085534-2087381 84.4 1.7e-23 1
CP000463_4028 CDS_4549719-4553273 83.8 2.5e-23 1
CP000463_1961 CDS_2193482-2191845 81.8 9.3e-23 1
CP000463_3886 CDS_4386990-4389527 81.4 1.2e-22 1
CP000463_4850 CDS_5476666-5475314 78.8 6.8e-22 1
CP000463_4562 CDS_5153674-5157045 74.0 1.5e-20 1
CP000463_0463 CDS_514616-512085 73.1 2.6e-20 1
CP000463_0817 CDS_918272-920131 68.9 4.1e-19 1
CP000463_4586 CDS_5182704-5185394 68.5 5.4e-19 1
CP000463_4744 CDS_5365768-5362268 59.4 2e-16 1
CP000463_2733 CDS_3100924-3102093 53.0 1.3e-14 1
CP000463_4614 CDS_5231083-5229752 48.1 3.2e-13 1
CP000463_2735 CDS_3103729-3106020 46.6 8.5e-13 1
CP000463_3295 CDS_3721943-3720831 45.5 1.7e-12 1
CP000463_1926 CDS_2157397-2158860 44.4 3.6e-12 1
CP000463_3419 CDS_3842986-3841622 43.8 5.4e-12 1
CP000463_0540 CDS_593013-591352 43.1 8.3e-12 1
CP000463_3596 CDS_4050761-4048416 42.6 1.2e-11 1
CP000463_4521 CDS_5107249-5108616 41.6 2.3e-11 1
CP000463_0233 CDS_264417-261919 41.3 2.8e-11 1
CP000463_1416 CDS_1600130-1601518 40.8 3.9e-11 1
CP000463_4811 CDS_5434850-5433690 40.7 4.1e-11 1
CP000463_0227 CDS_256464-257798 37.9 2.5e-10 1
CP000463_1715 CDS_1924833-1923298 37.8 2.8e-10 1
CP000463_0259 CDS_302824-300089 36.3 7.2e-10 1
CP000463_4040 CDS_4565647-4568685 34.3 2.6e-09 1
CP000463_0628 CDS_695586-697883 33.3 5.1e-09 1
CP000463_1546 CDS_1749868-1752492 33.0 6.3e-09 1
CP000463_1536 CDS_1739776-1742874 32.4 9.4e-09 1
CP000463_1471 CDS_1663841-1665436 31.8 1.4e-08 1
CP000463_1773 CDS_1989013-1986218 31.7 1.5e-08 1
CP000463_4821 CDS_5445392-5443221 31.6 1.6e-08 1
CP000463_2393 CDS_2655433-2653994 31.1 2.1e-08 1
CP000463_0629 CDS_697880-700210 28.2 1.4e-07 1
CP000463_2227 CDS_2485708-2483582 27.9 1.8e-07 2
CP000463_3955 CDS_4458103-4459296 27.6 2.1e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000463_1361 1/1 370 435 .. 1 87 [] 98.2 2.1e-27
CP000463_0360 1/1 231 296 .. 1 87 [] 91.7 1.5e-25
CP000463_2270 1/1 341 406 .. 1 87 [] 90.7 2.7e-25
CP000463_1195 1/1 645 710 .. 1 87 [] 90.4 3.4e-25
CP000463_1934 1/1 534 603 .. 1 87 [] 88.5 1.1e-24
CP000463_1859 1/1 353 422 .. 1 87 [] 84.4 1.7e-23
CP000463_4028 1/1 955 1024 .. 1 87 [] 83.8 2.5e-23
CP000463_1961 1/1 274 343 .. 1 87 [] 81.8 9.3e-23
CP000463_3886 1/1 323 388 .. 1 87 [] 81.4 1.2e-22
CP000463_4850 1/1 215 282 .. 1 87 [] 78.8 6.8e-22
CP000463_4562 1/1 672 738 .. 1 87 [] 74.0 1.5e-20
CP000463_0463 1/1 611 679 .. 1 87 [] 73.1 2.6e-20
CP000463_0817 1/1 385 450 .. 1 87 [] 68.9 4.1e-19
CP000463_4586 1/1 664 732 .. 1 87 [] 68.5 5.4e-19
CP000463_4744 1/1 800 865 .. 1 87 [] 59.4 2e-16
CP000463_2733 1/1 137 192 .. 1 78 [. 53.0 1.3e-14
CP000463_4614 1/1 229 287 .. 1 87 [] 48.1 3.2e-13
CP000463_2735 1/1 509 580 .. 1 87 [] 46.6 8.5e-13
CP000463_3295 1/1 134 198 .. 1 87 [] 45.5 1.7e-12
CP000463_1926 1/1 243 309 .. 1 87 [] 44.4 3.6e-12
CP000463_3419 1/1 246 304 .. 1 87 [] 43.8 5.4e-12
CP000463_0540 1/1 323 392 .. 1 87 [] 43.1 8.3e-12
CP000463_3596 1/1 413 479 .. 1 87 [] 42.6 1.2e-11
CP000463_4521 1/1 251 309 .. 1 87 [] 41.6 2.3e-11
CP000463_0233 1/1 459 527 .. 1 87 [] 41.3 2.8e-11
CP000463_1416 1/1 259 317 .. 1 87 [] 40.8 3.9e-11
CP000463_4811 1/1 12 64 .. 1 74 [. 40.7 4.1e-11
CP000463_0227 1/1 209 275 .. 1 87 [] 37.9 2.5e-10
CP000463_1715 1/1 281 352 .. 1 87 [] 37.8 2.8e-10
CP000463_0259 1/1 536 602 .. 1 87 [] 36.3 7.2e-10
CP000463_4040 1/1 645 710 .. 1 87 [] 34.3 2.6e-09
CP000463_0628 1/1 523 591 .. 1 87 [] 33.3 5.1e-09
CP000463_1546 1/1 485 551 .. 1 87 [] 33.0 6.3e-09
CP000463_1536 1/1 668 733 .. 1 87 [] 32.4 9.4e-09
CP000463_1471 1/1 169 235 .. 1 87 [] 31.8 1.4e-08
CP000463_1773 1/1 542 608 .. 1 87 [] 31.7 1.5e-08
CP000463_4821 1/1 342 411 .. 1 87 [] 31.6 1.6e-08
CP000463_2393 1/1 238 309 .. 1 87 [] 31.1 2.1e-08
CP000463_0629 1/1 537 605 .. 1 87 [] 28.2 1.4e-07
CP000463_3955 1/1 189 247 .. 1 87 [] 27.6 2.1e-07

Alignments of top-scoring domains:
CP000463_1361: domain 1 of 1, from 370 to 435: score 98.2, E = 2.1e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHE+RTP+++++g+a +Lle t+l++eq
CP000463_1 370 AKSEFLAMMSHEIRTPMNGVLGLANVLLE---------TKLDPEQ-- 405

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ ti+++++ l+r++nd+Ldls++eag
CP000463_1 406 ----------HHAVATIRDSGDNLQRILNDILDLSKLEAG 435

CP000463_0360: domain 1 of 1, from 231 to 296: score 91.7, E = 1.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL++I+g++ lLl+ tels+eq+
CP000463_0 231 AKSRFLAMASHEIRTPLNGIIGMSGLLLD---------TELSPEQI- 267

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++ ++ +++ l +Li++lLd+s+ieag
CP000463_0 268 -----------TYVKAVKTSGDALASLIEELLDYSKIEAG 296

CP000463_2270: domain 1 of 1, from 341 to 406: score 90.7, E = 2.7e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+sefla++sHE+RTP+++++g+a+lL + ++l+ eq
CP000463_2 341 ARSEFLAMMSHEIRTPMNGVIGLADLLVA---------ADLPGEQ-- 376

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ t++++a++ll+L+nd+Ld+s+++a+
CP000463_2 377 ----------NKIAATLRESADYLLQLLNDVLDFSKLDAN 406

CP000463_1195: domain 1 of 1, from 645 to 710: score 90.4, E = 3.4e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHE+RTP++++ g+++lL+e t+l++eq
CP000463_1 645 AKSDFLAIMSHEIRTPMSGMVGMIDLLRE---------TPLTAEQ-- 680

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y e++++++++ll nd+Ld+s++eag
CP000463_1 681 ----------KGYAEIAKESVNSLLGVTNDILDFSKLEAG 710

CP000463_1934: domain 1 of 1, from 534 to 603: score 88.5, E = 1.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHELRTPL+aI+g++e++ +++ + l++e+
CP000463_1 534 TKSKFLANMSHELRTPLNAIIGFSEIMGSGMF------GRLGSEK-- 572

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ey + il ++++ll+ ind+Ld+s+ieag
CP000463_1 573 ---------YQEYCHDILTSGHYLLEVINDILDMSKIEAG 603

CP000463_1859: domain 1 of 1, from 353 to 422: score 84.4, E = 1.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+fla++sHELRTPL+aI+g++e++ e+ s+e r
CP000463_1 353 SRSRFLATVSHELRTPLNAIIGFSEMIVQEQA------LMISAERR- 392

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey + i +++++ll+ +n +Ld+s++++g
CP000463_1 393 ----------REYAQLINDSGQHLLSVVNGILDMSKMDSG 422

CP000463_4028: domain 1 of 1, from 955 to 1024: score 83.8, E = 2.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak + la lsHE+RTPL+aI+g+ae++ e + ++l+ e
CP000463_4 955 AKADVLARLSHEIRTPLNAILGFAEVMIE------ERLGALGNER-- 993

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y eyl+ i+ ++er + indlLdlsrie+g
CP000463_4 994 ---------YTEYLKDIRASGERVISVINDLLDLSRIETG 1024

CP000463_1961: domain 1 of 1, from 274 to 343: score 81.8, E = 9.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHELRTPL+aI+g++e+++ + ++ ++
CP000463_1 274 AKSRFLAQMSHELRTPLNAILGFSEVMKS---------EIFGAHAVA 311

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++y i++++ +ll+Lin++Ldlsrieag
CP000463_1 312 VY--------KDYSADIHNSGVHLLNLINEILDLSRIEAG 343

CP000463_3886: domain 1 of 1, from 323 to 388: score 81.4, E = 1.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP++a++g++ Ll+ ++ls+eq
CP000463_3 323 AKSAFLAMMSHEIRTPMNAVLGLSTHLLD---------AKLSPEQ-- 358

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + i+++++ ll L++d+Ld+s++eag
CP000463_3 359 ----------RHSVVGIHDAGDALLGLLDDILDFSKLEAG 388

CP000463_4850: domain 1 of 1, from 215 to 282: score 78.8, E = 6.8e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPL+a++g++++L+ +++++ +++
CP000463_4 215 MRVDFVANASHELRTPLAALSGFIDTLQG---------PARDDAKAR 252

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +++ +a+r+ rLi+dlL lsr e
CP000463_4 253 ----------ERFLGIMHAQARRMARLIDDLLSLSRVELS 282

CP000463_4562: domain 1 of 1, from 672 to 738: score 74.0, E = 1.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ + +lsHELR PL+aI+gya+lL+ d+ l ++
CP000463_4 672 AKSRYVVGLSHELRSPLNAISGYAQLLEQ--------DASLLPKP-- 708

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ ++r+ae+l+ Li+ lLd+s+ieag
CP000463_4 709 ----------RDQVRQVRRSAEHLSGLIDGLLDISKIEAG 738

CP000463_0463: domain 1 of 1, from 611 to 679: score 73.1, E = 2.6e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ ++s ELR PLt+I+g+a+ L + a+ ++l+e+q
CP000463_0 611 MKVKFVHHVSYELRSPLTTIIGFAHFLAD------ASTGPLTEKQ-- 649

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl+ i +++ ll++in++Ldl+ i+ag
CP000463_0 650 ----------AEYLSYITTSTNALLAIINNILDLATIDAG 679

CP000463_0817: domain 1 of 1, from 385 to 450: score 68.9, E = 4.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a++sHEL++PLt++r ++e+L +++e r
CP000463_0 385 AIESFAADVSHELKNPLTSLRSAVETLPL----------AKNERSR- 420

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++le+i+++++rl+rLi+d+ d sr++a+
CP000463_0 421 ----------TRLLEVIEHDVKRLDRLISDISDASRLDAE 450

CP000463_4586: domain 1 of 1, from 664 to 732: score 68.5, E = 5.4e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +la++sH++RTPL++I+g a Ll ++d ++ q
CP000463_4 664 VRNTLLASISHDFRTPLSSILGSATSLLSYGD------KIDDASQ-- 702

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l i++eae l++++++lL ++rieag
CP000463_4 703 ----------RDLLGNIRQEAEGLDEMVRNLLSITRIEAG 732

CP000463_4744: domain 1 of 1, from 800 to 865: score 59.4, E = 2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH++ +PL+a r+y+ L e ++
CP000463_4 800 SKTRFLAAASHDILQPLNAARLYVTSLVE---------KQGAGQD-- 835

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e i++++e ++++i lLd+sr++ag
CP000463_4 836 ----------GKLVENIDESLEAIEDIIGALLDISRLDAG 865

CP000463_2733: domain 1 of 1, from 137 to 192: score 53.0, E = 1.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++a+l+HE+++PL++Irg+a+lL+ +s+e+
CP000463_2 137 SVTALAAMLAHEIKNPLSGIRGAAQLLEQ----------QASSED-- 171

peLRledpeyreyletilreaerllrLindl<-*
r +++ i +ea+r+ L++++
CP000463_2 172 ----------RMLTRLICDEADRIVTLVDRM 192

CP000463_4614: domain 1 of 1, from 229 to 287: score 48.1, E = 3.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++la++sH+LRTP+t +r+ +e +++
CP000463_4 229 DRTKMLAAISHDLRTPITRMRLRTEFIED------------------ 257

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +lr++++++++++ +L + r + +
CP000463_4 258 ----------ETSRNQMLRDLDQMRAMLDSVLSFLRNDGQ 287

CP000463_2735: domain 1 of 1, from 509 to 580: score 46.6, E = 8.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ ++ ++HE+++PLt I++ ae +++++ ++l e++
CP000463_2 509 AWGDVARRIAHEIKNPLTPIQLSAERIRRKF-------GKLIVEDK- 547

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ ++ti+r+++ ++r+++++ ++r+ +
CP000463_2 548 -------GIFEQCTDTIIRQVDDIRRMVDEFSRFARMPKP 580

CP000463_3295: domain 1 of 1, from 134 to 198: score 45.5, E = 1.7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ + a+++HELRTPLt +rg ++ L ++++ e+
CP000463_3 134 SMTSWNAAIAHELRTPLTILRGRLHGLTDGVF----------EPS-- 168

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++ +l ++e+l+rL++dl+ + ++
CP000463_3 169 ----------DELFRNLLAQVESLSRLVDDLRVVTLSDSH 198

CP000463_1926: domain 1 of 1, from 243 to 309: score 44.4, E = 3.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e n++H+L+TPLt +r ae +l+ se +
CP000463_1 243 GLKEVSDNIAHDLKTPLTRLRNRAEEALA---------KSHSETE-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr +le+ ++e++ l r n lL ++r+e+g
CP000463_1 279 ---------YRAALERTIEESDGLIRTFNALLMIARAESG 309

CP000463_3419: domain 1 of 1, from 246 to 304: score 43.8, E = 5.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ flan++HE RTP++ +++ +e L
CP000463_3 246 RRELFLANAAHEVRTPIAILQTRIESLDP------------------ 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++l++++rl+ L ++lLd +r+++
CP000463_3 275 ----------GPQTARLLEDLKRLSTLADQLLDVERLGQT 304

CP000463_0540: domain 1 of 1, from 323 to 392: score 43.1, E = 8.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+e l +++H+L++PL +I+g +e+L e +++t++ + +
CP000463_0 323 FKNEILGTVAHDLKNPLGVILGRTEMLTE------LISTDAAKDSI- 362

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i+++++rl ++++ l + ++a
CP000463_0 363 ----------TVQIDHIRDATRRLTAMVDHLISDAMADAF 392

CP000463_3596: domain 1 of 1, from 413 to 479: score 42.6, E = 1.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++H++++ L++I+g ++lL++ l+++ r
CP000463_3 413 TIGQLTGGVAHDFNNLLAVILGSLSLLKK----------GLPDDPRT 449

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ +l+ aer L +lL ++r ++
CP000463_3 450 ----------SRLLDGALQGAERGATLTKRLLAFARRQEL 479

CP000463_4521: domain 1 of 1, from 251 to 309: score 41.6, E = 2.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++la+l H+LR P+ta+r ae+ +
CP000463_4 251 ERTRMLAALGHDLRSPITALRVRAEMVDD------------------ 279

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e e+++ ++ ++++++ L ++r +
CP000463_4 280 ----------AENRERMIATLDEMQQMVEATLAFARGVST 309

CP000463_0233: domain 1 of 1, from 459 to 527: score 41.3, E = 2.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g ++l++ +l ++ +++
CP000463_0 459 AVGQLTGGIAHDFNNLLTGIVGSLDLMQVRL------SQGRTDNL-- 497

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+e + +a+r +L +lL ++r +
CP000463_0 498 ----------ARYIEAAMTSANRAAALTHRLLAFARRQPL 527

CP000463_1416: domain 1 of 1, from 259 to 317: score 40.8, E = 3.9e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRT Lt ++ +el+ e +++
CP000463_1 259 QRTAMLAGVSHDLRTILTRFKLELELIGE-------------APE-- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++++++ + ++++ L ++r ++g
CP000463_1 291 -------------TEGMRKDVDEMAAMLEAYLAFARGDSG 317

CP000463_4811: domain 1 of 1, from 12 to 64: score 40.7, E = 4.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ la +HE RTPLt+I++ ++lL + ++l++ +
CP000463_4 12 VVETVLAVFAHEVRTPLTGILAVSDLLAT---------SDLDPRD-- 47

peLRledpeyreyletilreaerllrL<-*
r+ ++ti+ ae+l L
CP000463_4 48 ----------RRWVDTIKAGAEHLAGL 64

CP000463_0227: domain 1 of 1, from 209 to 275: score 37.9, E = 2.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+++HEL TPL++I + + L+ + +++ +
CP000463_0 209 QLDGLAAAAAHELGTPLSTIVLISRELEQ---------SVAPDSPM- 245

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l t++++a+r+++++ + l ++a+
CP000463_0 246 ----------AADLTTLREQAQRCREILGKISHLDSAGAP 275

CP000463_1715: domain 1 of 1, from 281 to 352: score 37.8, E = 2.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PL+aI+ y + ++ l t s++ r
CP000463_1 281 AMGEMASALAHELNQPLSAISNYMKGSRRLL-------TGSSDPNR- 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p ++ + +++ ++a r ++i++l+d+ ++
CP000463_1 320 -------PKIESAMDRAAEQALRAGQIIRRLRDFVSRGES 352

CP000463_0259: domain 1 of 1, from 536 to 602: score 36.3, E = 7.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++H++++ Lt+I g +e+L +++ t++++ +
CP000463_0 536 TIGQLTGGVAHDFNNILTVITGGVEILADGV-------TDRPALK-- 573

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++++ r ++L n+lL ++r +
CP000463_0 574 -----------DVALMVDQAVSRGRELTNQLLSFARKQPL 602

CP000463_4040: domain 1 of 1, from 645 to 710: score 34.3, E = 2.6e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++H++++ Lt++ g +el+++ + ++++
CP000463_4 645 ALGKLTGGIAHDFNNLLTVVVGSLELAEA---------QVADADV-- 680

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + +aer + ++lL ++r ++
CP000463_4 681 ----------TLLIRQAMAAAERGATINRRLLSFARRQHL 710

CP000463_0628: domain 1 of 1, from 523 to 591: score 33.3, E = 5.1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ +sH+++ PL I ++a lL e e+++e +
CP000463_0 523 ELEAFAHVASHDIKEPLRHIEAFAGLLGESI-------REMGDERL- 561

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i+++++rl++Lindl ++s+++
CP000463_0 562 ----------GLMVSGIEKSSHRLRNLINDLAEFSQLGRR 591

CP000463_1546: domain 1 of 1, from 485 to 551: score 33.0, E = 6.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++H++++ L+aI+++ + Ll+ ++ +++
CP000463_1 485 TVGQLAGGIAHDFNNVLSAIMMANDFLLN--------AHKPTDPS-- 521

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i++ a r L+++lL +sr ++
CP000463_1 522 ----------FQDIMQIKQNATRAATLVRQLLAFSRRQTL 551

CP000463_1536: domain 1 of 1, from 668 to 733: score 32.4, E = 9.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++H++++ Lt+I+g++el++ +++ ++
CP000463_1 668 ALGKLTGGIAHDFNNLLTVILGNLELAQL---------QAAQDDL-- 703

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ + +ae ++ ++lL ++r +a
CP000463_1 704 ----------KILIQQAMAAAEAGASINRRLLSFARHQAL 733

CP000463_1471: domain 1 of 1, from 169 to 235: score 31.8, E = 1.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g +e L + ++ +++
CP000463_1 169 AVGQLTGGIAHDFNNLLTVITGSVEELAH---------SLKDRPHL- 205

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++e i+++a r +L +lL ++r++
CP000463_1 206 ----------AGIVEMIDQAASRGAALTAQLLAFARMQPL 235

CP000463_1773: domain 1 of 1, from 542 to 608: score 31.7, E = 1.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g+ae+L ++l +++++
CP000463_1 542 AIGQLTGGIAHDFNNTLTVITGTAEILVDNL-------ADRPDLL-- 579

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i+++a r +L lL ++r +
CP000463_1 580 -----------HIAKLIDEAAGRGAELTKHLLAFARRQPL 608

CP000463_4821: domain 1 of 1, from 342 to 411: score 31.6, E = 1.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++++++H++++ Lt+++g++ + + ++ + +++
CP000463_4 342 AVGQLTSGVAHDFNNLLTVVLGNLGFIDK-----ALVAAGVDDKS-- 381

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l i+ +aer L +lL +sr +
CP000463_4 382 ----------RNRLANIRAAAERGATLTAQLLAFSRKQRL 411

CP000463_2393: domain 1 of 1, from 238 to 309: score 31.1, E = 2.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++ +l+HEL++PL+a+ y++ ++ +++++ ++ r
CP000463_2 238 TMGGMTTALAHELNQPLAAVTNYLSGSRR-----MLESSAHPDSLR- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+++ ++a r + i++l+d+ ++
CP000463_2 279 ---------IGSALDKAAQQALRAGAVIQRLRDFVDRGET 309

CP000463_0629: domain 1 of 1, from 537 to 605: score 28.2, E = 1.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ ++H+L+ PL I ++a lL + l ++ +
CP000463_0 537 ELESFAYVAAHDLKEPLRHIEAFAGLLTDLLQ------PAVDNRL-- 575

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i+ +++rl++Lindl ++sr + +
CP000463_0 576 ----------SAMVDGIEASSRRLRSLINDLAEYSRVGRQ 605

CP000463_3955: domain 1 of 1, from 189 to 247: score 27.6, E = 2.1e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +a++ H+LRTP+t +r+ ae ++
CP000463_3 189 SRMRVVAAAGHDLRTPITRMRLRAEFVED------------------ 217

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++++ l+r+ + +l r e+g
CP000463_3 218 ----------DDDRTMWLKDIDELERIADSAIQLVREESG 247


Histogram of all scores:
score obs exp (one = represents 16 sequences)
----- --- ---
-14 13 0|=
-13 58 3|*===
-12 232 111|======*========
-11 455 578|============================= *
-10 854 1072|====================================================== *
-9 893 1107|======================================================== *
-8 805 829|===================================================*
-7 663 522|================================*=========
-6 362 300|==================*====
-5 243 165|==========*=====
-4 105 88|=====*=
-3 61 46|==*=
-2 39 24|=*=
-1 22 12|*=
0 9 6|*
1 4 3|*
2 4 1|*
3 5 0|=
4 1 0|=
> 5 50 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 354.0338
P(chi-square) = 0

Total sequences searched: 4878

Whole sequence top hits:
tophits_s report:
Total hits: 41
Satisfying E cutoff: 41
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 40
Satisfying E cutoff: 40
Total memory: 37K


Acknowledgements:

This research is funded by:

Developed by: