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Thermotogae
Classification of phyla is from NCBI page
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35 projects found  

1 accessions found for Syntrophobacter fumaroxidans MPOB  

Data for CP000478  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000478.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000478_2282 CDS_2832417-2829805 94.3 2.2e-26 1
CP000478_0700 CDS_861150-859315 85.6 6.3e-24 1
CP000478_2864 CDS_3569548-3567701 82.7 4.2e-23 1
CP000478_2186 CDS_2705147-2707618 80.3 2e-22 1
CP000478_1985 CDS_2457521-2456112 74.5 9.3e-21 1
CP000478_3078 CDS_3820266-3821723 72.9 2.5e-20 1
CP000478_2595 CDS_3238336-3236504 71.9 4.9e-20 1
CP000478_2534 CDS_3162881-3161259 70.7 1.1e-19 1
CP000478_0847 CDS_1058949-1057477 69.0 3.2e-19 1
CP000478_2272 CDS_2820357-2818891 68.4 4.9e-19 1
CP000478_3580 CDS_4425037-4423049 66.8 1.4e-18 1
CP000478_1472 CDS_1843738-1845213 66.5 1.7e-18 1
CP000478_2631 CDS_3285607-3287034 65.4 3.4e-18 1
CP000478_1487 CDS_1860258-1863116 65.3 3.6e-18 1
CP000478_0118 CDS_144442-146157 64.8 5.1e-18 1
CP000478_2781 CDS_3459189-3460706 64.3 6.9e-18 1
CP000478_3238 CDS_4005869-4004010 62.9 1.7e-17 1
CP000478_2737 CDS_3409368-3410891 61.8 3.7e-17 1
CP000478_1181 CDS_1477516-1474778 57.3 6.6e-16 1
CP000478_0617 CDS_749278-751539 56.0 1.5e-15 1
CP000478_2356 CDS_2934016-2938545 54.6 4e-15 1
CP000478_0821 CDS_1028194-1026491 52.8 1.3e-14 1
CP000478_0637 CDS_771683-773161 52.2 1.9e-14 1
CP000478_2419 CDS_3021786-3020050 50.7 5e-14 1
CP000478_3081 CDS_3826180-3823979 48.7 1.8e-13 1
CP000478_3706 CDS_4562829-4566158 48.7 1.8e-13 1
CP000478_1914 CDS_2357259-2359484 48.4 2.2e-13 1
CP000478_2913 CDS_3631368-3634313 48.0 2.8e-13 1
CP000478_0819 CDS_1023468-1025012 46.5 7.6e-13 1
CP000478_1843 CDS_2280100-2277491 43.1 7e-12 1
CP000478_0934 CDS_1156470-1159007 42.9 8e-12 1
CP000478_0576 CDS_706395-708641 42.4 1.1e-11 1
CP000478_2649 CDS_3307748-3306729 41.0 2.8e-11 1
CP000478_1930 CDS_2384300-2383164 40.8 3.2e-11 1
CP000478_0291 CDS_355846-352631 40.7 3.4e-11 1
CP000478_0626 CDS_759455-761221 39.2 8.9e-11 1
CP000478_0663 CDS_805541-803439 38.1 1.9e-10 1
CP000478_0997 CDS_1238774-1237101 38.0 1.9e-10 1
CP000478_1434 CDS_1794786-1791700 35.9 7.8e-10 1
CP000478_2285 CDS_2835547-2837202 35.8 8.4e-10 1
CP000478_3707 CDS_4566384-4570190 35.7 8.7e-10 1
CP000478_0612 CDS_744128-745801 35.2 1.2e-09 1
CP000478_2811 CDS_3498831-3500981 35.2 1.3e-09 1
CP000478_1383 CDS_1734845-1732680 34.9 1.5e-09 1
CP000478_2378 CDS_2964840-2967815 34.0 2.8e-09 1
CP000478_1324 CDS_1657437-1659905 33.8 3.2e-09 1
CP000478_0614 CDS_746387-747328 32.8 5.9e-09 1
CP000478_0228 CDS_271546-274056 31.8 1.1e-08 1
CP000478_3485 CDS_4307638-4305365 30.8 2.1e-08 1
CP000478_1887 CDS_2324965-2326824 30.7 2.3e-08 1
CP000478_2515 CDS_3136781-3138325 30.1 3.4e-08 1
CP000478_2470 CDS_3077375-3078466 29.2 6.3e-08 1
CP000478_0646 CDS_782815-784539 28.4 1.1e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000478_2282 1/1 387 452 .. 1 87 [] 94.3 2.2e-26
CP000478_0700 1/1 370 437 .. 1 87 [] 85.6 6.3e-24
CP000478_2864 1/1 371 438 .. 1 87 [] 82.7 4.2e-23
CP000478_2186 1/1 318 386 .. 1 87 [] 80.3 2e-22
CP000478_1985 1/1 242 308 .. 1 87 [] 74.5 9.3e-21
CP000478_3078 1/1 254 322 .. 1 87 [] 72.9 2.5e-20
CP000478_2595 1/1 380 448 .. 1 87 [] 71.9 4.9e-20
CP000478_2534 1/1 301 367 .. 1 87 [] 70.7 1.1e-19
CP000478_0847 1/1 261 326 .. 1 87 [] 69.0 3.2e-19
CP000478_2272 1/1 249 317 .. 1 87 [] 68.4 4.9e-19
CP000478_3580 1/1 429 496 .. 1 87 [] 66.8 1.4e-18
CP000478_1472 1/1 257 323 .. 1 87 [] 66.5 1.7e-18
CP000478_2631 1/1 256 321 .. 1 87 [] 65.4 3.4e-18
CP000478_1487 1/1 590 655 .. 1 87 [] 65.3 3.6e-18
CP000478_0118 1/1 348 414 .. 1 87 [] 64.8 5.1e-18
CP000478_2781 1/1 274 340 .. 1 87 [] 64.3 6.9e-18
CP000478_3238 1/1 389 455 .. 1 87 [] 62.9 1.7e-17
CP000478_2737 1/1 282 348 .. 1 87 [] 61.8 3.7e-17
CP000478_1181 1/1 542 608 .. 1 87 [] 57.3 6.6e-16
CP000478_0617 1/1 514 580 .. 1 87 [] 56.0 1.5e-15
CP000478_2356 1/1 1139 1204 .. 1 87 [] 54.6 4e-15
CP000478_0821 1/1 342 415 .. 1 87 [] 52.8 1.3e-14
CP000478_0637 1/1 266 332 .. 1 87 [] 52.2 1.9e-14
CP000478_2419 1/1 349 415 .. 1 87 [] 50.7 5e-14
CP000478_3081 1/1 364 430 .. 1 87 [] 48.7 1.8e-13
CP000478_3706 1/1 730 796 .. 1 87 [] 48.7 1.8e-13
CP000478_1914 1/1 522 593 .. 1 87 [] 48.4 2.2e-13
CP000478_2913 1/1 607 673 .. 1 87 [] 48.0 2.8e-13
CP000478_0819 1/1 278 351 .. 1 87 [] 46.5 7.6e-13
CP000478_1843 1/1 644 712 .. 1 87 [] 43.1 7e-12
CP000478_0934 1/1 618 688 .. 1 87 [] 42.9 8e-12
CP000478_0576 1/1 524 594 .. 1 87 [] 42.4 1.1e-11
CP000478_2649 1/1 124 190 .. 1 87 [] 41.0 2.8e-11
CP000478_1930 1/1 140 206 .. 1 87 [] 40.8 3.2e-11
CP000478_0291 1/1 852 914 .. 1 87 [] 40.7 3.4e-11
CP000478_0626 1/1 348 422 .. 1 87 [] 39.2 8.9e-11
CP000478_0663 1/1 452 520 .. 1 87 [] 38.1 1.9e-10
CP000478_0997 1/1 185 251 .. 1 87 [] 38.0 1.9e-10
CP000478_1434 1/1 802 870 .. 1 87 [] 35.9 7.8e-10
CP000478_2285 1/1 329 389 .. 1 81 [. 35.8 8.4e-10
CP000478_3707 1/1 897 963 .. 1 87 [] 35.7 8.7e-10
CP000478_0612 1/1 327 401 .. 1 87 [] 35.2 1.2e-09
CP000478_2811 1/1 480 548 .. 1 87 [] 35.2 1.3e-09
CP000478_1383 1/1 349 415 .. 1 87 [] 34.9 1.5e-09
CP000478_2378 1/1 623 689 .. 1 87 [] 34.0 2.8e-09
CP000478_1324 1/1 447 513 .. 1 87 [] 33.8 3.2e-09
CP000478_0614 1/1 82 156 .. 1 87 [] 32.8 5.9e-09
CP000478_0228 1/1 465 531 .. 1 87 [] 31.8 1.1e-08
CP000478_3485 1/1 382 446 .. 1 87 [] 30.8 2.1e-08
CP000478_1887 1/1 245 306 .. 1 82 [. 30.7 2.3e-08
CP000478_2515 1/1 302 367 .. 1 87 [] 30.1 3.4e-08
CP000478_2470 1/1 146 214 .. 1 87 [] 29.2 6.3e-08
CP000478_0646 1/1 344 416 .. 1 87 [] 28.4 1.1e-07

Alignments of top-scoring domains:
CP000478_2282: domain 1 of 1, from 387 to 452: score 94.3, E = 2.2e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP++aI+g+++lL ++ q
CP000478_2 387 AKSEFLANMSHEIRTPMNAILGFTSLLSP---------LITDPRQ-- 422

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl++i+++++ l +Lind+Ldls+ieag
CP000478_2 423 ----------KNYLQSIQSSGKNLMSLINDILDLSKIEAG 452

CP000478_0700: domain 1 of 1, from 370 to 437: score 85.6, E = 6.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHELRTPLtaI+g ae+Ll ++ +e +l
CP000478_0 370 VRQDFVANVSHELRTPLTAIKGSAETLLS---------EPSPESGTL 407

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l +ilr +e++ ++++dlL+l+r+e+
CP000478_0 408 ----------ASFLGIILRNSEHMVKMVDDLLQLARLESR 437

CP000478_2864: domain 1 of 1, from 371 to 438: score 82.7, E = 4.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHELRTPLt+I+gy+e+Ll+ ++ ++ +
CP000478_2 371 VRQDFVANVSHELRTPLTSIKGYTETLLA--------EDRVDPHML- 408

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+++l+ +++ ++++dlL+l+r+ea+
CP000478_2 409 ----------SSFLQIVLKNTNHVVKIVEDLLQLARLEAQ 438

CP000478_2186: domain 1 of 1, from 318 to 386: score 80.3, E = 2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+sef+an+sHELRTPL++I+g++ lL + +++ ++
CP000478_2 318 LRSEFVANMSHELRTPLNSIIGFSGLLMK----------NRGGNLVA 354

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ L y e+i r +++ll+Lind+Ldls+ieag
CP000478_2 355 TDL--------SYAEKINRNGKHLLNLINDILDLSKIEAG 386

CP000478_1985: domain 1 of 1, from 242 to 308: score 74.5, E = 9.3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f a++sHEL TPLt ++g +e++l+ +++++e+
CP000478_1 242 QVRRFSADASHELQTPLTILKGELEVALR---------SPRTPEE-- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ l+++l+e++r+ +L++ lL l+r+eag
CP000478_1 278 ---------YQAVLKSALEEIDRIAHLVEGLLLLARAEAG 308

CP000478_3078: domain 1 of 1, from 254 to 322: score 72.9, E = 2.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f+++lsHE+RTPLt+Ir + l+ ee+ +e +e q
CP000478_3 254 MRSDFISMLSHEIRTPLTSIRESVNLIVEEV------VGEINERQ-- 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+++ +e++r+ +L+n l++ sr+eag
CP000478_3 293 ----------RRFLQIASDEIQRITSLLNHLMQVSRLEAG 322

CP000478_2595: domain 1 of 1, from 380 to 448: score 71.9, E = 4.9e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks +++++sHEL+TPLt++r++a++Ll + ++l+++q
CP000478_2 380 VKSGLISTVSHELKTPLTSVRLAAHVLLS------EKLGPLNPKQ-- 418

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l ++++++rl ++i++lLd+srie+
CP000478_2 419 ----------VEILVAAREDSDRLYQIIENLLDISRIETD 448

CP000478_2534: domain 1 of 1, from 301 to 367: score 70.7, E = 1.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++a+++HE+R+PL++I +++++L++el +l++ q
CP000478_2 301 ALGTLAAGIAHEIRNPLATINFNTQMLQREL--------HLDAAQ-- 337

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ +l+e++ ++r+++++L ++r +++
CP000478_2 338 ----------QQMFDDVLKEIRKMDRIVQQVLHFARPREP 367

CP000478_0847: domain 1 of 1, from 261 to 326: score 69.0, E = 3.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++a++sHE+R+PL Ir +aelL + +e q
CP000478_0 261 ALGEMIAGVSHEIRNPLGIIRSTAELLND---------RIEDERQ-- 296

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++i +e+ rl++++ ++Ld++r a
CP000478_0 297 ----------KRFSSIIVEESTRLNDILTEFLDFARPKAI 326

CP000478_2272: domain 1 of 1, from 249 to 317: score 68.4, E = 4.9e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +f+a++sHELRTPLtaIr + lLle + ++ls+ q
CP000478_2 249 LKADFTAHVSHELRTPLTAIREGIALLLE------EIPGPLSSSQ-- 287

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le+++ +erl i+ +Ldlsr+e +
CP000478_2 288 ----------KEILEVVRGNGERLFVSISSILDLSRMEGE 317

CP000478_3580: domain 1 of 1, from 429 to 496: score 66.8, E = 1.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f++++ HEL+TPLt Ir+y+e+L+ + +s+++r
CP000478_3 429 RRSGFVSSVTHELKTPLTNIRMYVEMLEH---------GIASDPERE 466

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey +++ +e+ rl+rLin++L++s++e
CP000478_3 467 ----------MEYYRILGSESARLSRLINNVLEFSKLEKK 496

CP000478_1472: domain 1 of 1, from 257 to 323: score 66.5, E = 1.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ a+++HE R+PL +I++++el++e + +++e++
CP000478_1 257 AVGKVSAHIAHEVRNPLGSIKTLTELIRE---------DLRPDETQ- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++il+++ rl+rLi+d+L +sr
CP000478_1 294 ----------AKYADVILDQVGRLDRLIEDVLSFSRSSLL 323

CP000478_2631: domain 1 of 1, from 256 to 321: score 65.4, E = 3.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +l HE++ PL+aIrg+ael++e e+s++ r
CP000478_2 256 YVERYVQTLTHEIKAPLSAIRGAAELMEE----------EMSPDVR- 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ i+ ea+r++rL++++L ls +e+
CP000478_2 292 ----------ARFLSNIRTEANRIQRLVDRMLRLSELENK 321

CP000478_1487: domain 1 of 1, from 590 to 655: score 65.3, E = 3.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++++++HEL++PL+++ gy+el ++ + +s+++
CP000478_1 590 ALGQLISGVAHELNNPLASVVGYSELVQA---------GQASAKD-- 625

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le+i++ea r ++++ lL+++r + +
CP000478_1 626 ----------KKHLEIIKNEALRASAIVKGLLTFARERKP 655

CP000478_0118: domain 1 of 1, from 348 to 414: score 64.8, E = 5.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +a +sHE+++PL+a++g++++L++ + ++ r
CP000478_0 348 FAGRIAAEISHEIKNPLAAMSGAVQMLED---------ESIPDGSR- 384

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++i+re++r+++L+ d+L l++ +g
CP000478_0 385 ----------ARLMSIIHREIDRMNSLVKDFLWLAKSTHG 414

CP000478_2781: domain 1 of 1, from 274 to 340: score 64.3, E = 6.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HE+++PLt+I+++++l l+ e++++
CP000478_2 274 SLGQLAAGVAHEINNPLTGIIFFSKLVLD--------TLEKDDPR-- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l i ++a+r+ +++ +lL +sr ++
CP000478_2 311 ----------RENLAAIFEDAKRCGKIVTNLLAYSRQANP 340

CP000478_3238: domain 1 of 1, from 389 to 455: score 62.9, E = 1.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HE+RTPLt+++++++ ++ el
CP000478_3 389 SLGQLAAGVAHEIRTPLTSLKMFLQSIES----------ELEISF-- 423

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey+e ++++ ++ r+++ in++Ld+++ +a+
CP000478_3 424 --------EYEEDFQIAMTQILRMEATINRFLDFAKPQAP 455

CP000478_2737: domain 1 of 1, from 282 to 348: score 61.8, E = 3.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+++PL++I+gy++lLl+ e qr
CP000478_2 282 SVGQLAAGIAHEINNPLSVILGYTQLLLR---------NEPQGTQR- 318

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +++++ a+ + r++ dlL ++r
CP000478_2 319 ----------YEDYRIVEKHARTCKRIVGDLLSFARSTKT 348

CP000478_1181: domain 1 of 1, from 542 to 608: score 57.3, E = 6.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ Lt I+gy+el+l+ s+e++
CP000478_1 542 AIGTLAGGIAHDFNNILTPIIGYTELALA---------RMGSAEHA- 578

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ +l++a+r +L+n++L sr + +
CP000478_1 579 ----------QRDLHQVLKAAQRAKDLVNQILAVSRHDRE 608

CP000478_0617: domain 1 of 1, from 514 to 580: score 56.0, E = 1.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+++HE+++P+ ++g+++l+le +++ ++
CP000478_0 514 SLGTLAAGVAHEINNPIGIMLGFCDLMLE----------RMDPGTME 550

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ti+r + ++ +++++lL ++r+ ++
CP000478_0 551 ----------YNDLKTIERHGLHCKSIVERLLSFARMSEE 580

CP000478_2356: domain 1 of 1, from 1139 to 1204: score 54.6, E = 4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L+aI+gy+e+ + t ++
CP000478_2 1139 AIGTLAGGIAHDFNNILAAIIGYTEMTRQ---------TVEHPDP-- 1174

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+ +l++ +r ++L+ ++L +sr +
CP000478_2 1175 ----------RRYLDQVLKACDRARNLVGQILAFSRKAER 1204

CP000478_0821: domain 1 of 1, from 342 to 415: score 52.8, E = 1.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a++ HE+++PL++I+ ya l+ + +g + l +e
CP000478_0 342 SLGRLAASVVHEINNPLAGILNYARLMTK-----MLGKGMLASES-- 381

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ yl+ +++e+ r+++++++lL +sr +
CP000478_0 382 ------VTKFQGYLSLMESELSRCSKIVSNLLSFSRQSTL 415

CP000478_0637: domain 1 of 1, from 266 to 332: score 52.2, E = 1.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++a+++H +R+PLt++++ + ++++ +ls+ q
CP000478_0 266 LVGKLAAGVAHSIRNPLTSVKMRLFTMER--------TLDLSSNQ-- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +++i +e+++++++++++L++sr
CP000478_0 303 ----------KEDFDVISDEIRHIDNILQNFLEFSRPPKL 332

CP000478_2419: domain 1 of 1, from 349 to 415: score 50.7, E = 5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++a+++HEL+ PLt I+g+a+l+ + ++ +eq+
CP000478_2 349 VIGQLAAAVAHELNEPLTNILGFAQLAVK---------EPVLPEQV- 385

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
le+i+ + + +++++ lL + r +
CP000478_2 386 ----------GGDLERIIANSLHAREIVRKLLMYGRKMPE 415

CP000478_3081: domain 1 of 1, from 364 to 430: score 48.7, E = 1.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ LtaI gya++L+ ++e+ +
CP000478_3 364 AVGRLAGGIAHDFNNLLTAITGYADTLES---------NLKGEDAL- 400

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ e i+r+aer +L ++lL +sr +
CP000478_3 401 ----------RKNAEEIRRAAERAAALTSQLLAFSRKQVL 430

CP000478_3706: domain 1 of 1, from 730 to 796: score 48.7, E = 1.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L I+gyael+++ e + e+++
CP000478_3 730 AIGTLAGGIAHDFNNILGIIMGYAELARM----------EFPRETTA 766

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re ++ +l++++r +L++++Ld+sr ++
CP000478_3 767 ----------RESIDEVLKATHRAKELVRQILDFSRTREY 796

CP000478_1914: domain 1 of 1, from 522 to 593: score 48.4, E = 2.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e ++ ++HE+++PLt I++ a+ L+++ +el ee
CP000478_1 522 AWREVARRIAHEIKNPLTPIQLSAQRLRRKH-------PELLEEA-- 559

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
d + e ++ti+++++++ +L+n++ ++r+
CP000478_1 560 ------DSVFDECTRTIIQQVDHMKHLVNEFSKFARLPRA 593

CP000478_2913: domain 1 of 1, from 607 to 673: score 48.0, E = 2.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++ +++H++++ L+aI+gy+e++l+++ ++ +
CP000478_2 607 ALGTLAGGIAHDFNNILAAILGYTEMALTDV--------SRNNPA-- 643

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yle +l++ +r +L++++L sr++ +
CP000478_2 644 ----------GHYLEQVLKACHRAKELVRQILATSRLRKP 673

CP000478_0819: domain 1 of 1, from 278 to 351: score 46.5, E = 7.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a++ HE+++PL++I ++a l el+ + +e r
CP000478_0 278 SLGKLVAGVVHEINNPLSGINALARLVHQELE------SCDLDEGRK 318

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ i+ e+ r+++++ dlL +sr+++
CP000478_0 319 EK-------FLYYLHLIDTESSRCSDIVKDLLSFSRLREV 351

CP000478_1843: domain 1 of 1, from 644 to 712: score 43.1, E = 7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ +sH+L PL I++y +lL+++ + l++
CP000478_1 644 ELEEFAFVASHDLQEPLRKIKTYGDLLQKRCA------PCLDDAG-- 682

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+le++lr+a+r++rL+ndlL++sr a
CP000478_1 683 ----------LGFLERMLRSADRMRRLLNDLLQYSRVAAK 712

CP000478_0934: domain 1 of 1, from 618 to 688: score 42.9, E = 8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++a+l+HE+++PLtaI+ +a++++ +l e +e +
CP000478_0 618 TLGELAASLAHEINQPLTAILSNAQAAQHFLA------REVPETD-- 656

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+r++l+ i+++ +r ++ i++++ l + +a
CP000478_0 657 --------EIRQILDDIIEDDKRVSEVIRRMRSLLKKGAA 688

CP000478_0576: domain 1 of 1, from 524 to 594: score 42.4, E = 1.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++ +l+HEL++PL+aI+ ya ++++ ++ +e + ++
CP000478_0 524 ALGELAGSLAHELNQPLAAILNYANAARR-----FLAAAEPNLSKV- 564

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+ i+r+ +r + i++++ l r +++
CP000478_0 565 ----------SEALQGIIRDEKRAAQVIREVRALIRKQEP 594

CP000478_2649: domain 1 of 1, from 124 to 190: score 41.0, E = 2.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ ++ ++H+++TPL aI g+ +lL + + + + r
CP000478_2 124 AIGKAISCVAHDMKTPLIAIGGFGQLLMK---------HFETGDPR- 160

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e le+i +e++rl+ +++++Ld+sr +
CP000478_2 161 ----------LEKLEIIVKETRRLEMMVREMLDFSRPLEL 190

CP000478_1930: domain 1 of 1, from 140 to 206: score 40.8, E = 3.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + + +++HE+R+PL ++ g++ + + t+ +++++
CP000478_1 140 DLIKIANGIAHEIRNPLVSLGGFLNRIYK---------THSGDDEL- 176

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y ++ r+++r+++Li + ++r+ ++
CP000478_1 177 ----------MKYHDISMRSLRRIENLIAKVELFARLPTP 206

CP000478_0291: domain 1 of 1, from 852 to 914: score 40.7, E = 3.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +a ++HE+R+PL ++ g+a L++++ +e +e
CP000478_0 852 TLGAIAAEVAHEIRNPLMSLGGFAMRLQKKY-------PESPE---- 887

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+il+e++rl+++++++ d+ r
CP000478_0 888 -------------VEIILEESRRLEKILDRIKDYLRPVDI 914

CP000478_0626: domain 1 of 1, from 348 to 422: score 39.2, E = 8.9e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +e++a+++HE+++PL++I++ +l ++ + +
CP000478_0 348 SIGELAAGVAHEINNPLAVILTENQLVRD---------MADEAAS-- 383

peLRledpeyreyl....etilreaerllrLindlLdlsrieag<-*
+d+e+++ l ++ + i+ +++r++r+ ++lL +sr
CP000478_0 384 -----FDGEFKQQLyesmDQIDAQIHRCSRITQNLLRFSRRIKS 422

CP000478_0663: domain 1 of 1, from 452 to 520: score 38.1, E = 1.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+L PL I+++ e L+ ++ + ls+ +
CP000478_0 452 NLQDFAFVASHDLQEPLRKIQTFGERLRSKYA------DVLSDTAI- 491

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yle+++++a r++rLi+ lL++sr a
CP000478_0 492 -----------NYLERMQNAAARMQRLIDALLTFSRVTAT 520

CP000478_0997: domain 1 of 1, from 185 to 251: score 38.0, E = 1.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L +I+gy+el+l+ t e +
CP000478_0 185 AIGLLAGGVAHDFNNLLGVIMGYSELCLT---------TIHKESPL- 221

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +e i++++ r L+++lL +sr +
CP000478_0 222 ----------YDNIEHIKNAGLRAATLVRQLLAFSRKQIL 251

CP000478_1434: domain 1 of 1, from 802 to 870: score 35.9, E = 7.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ +sH+L PL I+++ e+L + + + l++e
CP000478_1 802 ELQEFAFIASHDLQEPLRKIQTFGEMLVR------RKKDSLDAEG-- 840

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +le+i++ a+r+ +L+ l+++sr ++
CP000478_1 841 ----------KNLLERIIKGANRMAELLHALRTYSRSGTS 870

CP000478_2285: domain 1 of 1, from 329 to 389: score 35.8, E = 8.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
se a l+HE+R+PL + g+a Ll + +++ +
CP000478_2 329 TISEVSARLAHEIRNPLVSAGGFARRLLS---------SMPPSDPN- 365

peLRledpeyreyletilreaerllrLindlLdl<-*
r+ +e+i +e+ rl+ +++ +L +
CP000478_2 366 ----------RDKVEIIVKEVSRLEGILRMILNY 389

CP000478_3707: domain 1 of 1, from 897 to 963: score 35.7, E = 8.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L I+gyae++ +l + ++
CP000478_3 897 AIGTLAGGIAHDFNNILGIIMGYAEIANLDL--------PFDSSA-- 933

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e + +l++++r + L ++L++sr +
CP000478_3 934 ----------KESIAEVLKATRRARGLTAQILTFSRKHVQ 963

CP000478_0612: domain 1 of 1, from 327 to 401: score 35.2, E = 1.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++a+++HE ++PL++I+ + +++ l+++++ + ++
CP000478_0 327 ALGKLAAGIAHEVNNPLAVIKEKVGWMKD-----LLSEEDVEASENF 368

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e + +++++i+ +er ++ +lL ++r ++
CP000478_0 369 KE-------FDDAVKKIDYHVERARKVTHRLLGFARRMEP 401

CP000478_2811: domain 1 of 1, from 480 to 548: score 35.2, E = 1.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ +sH+L+ PL ++++ + L ++ +e+ +e+
CP000478_2 480 ELQEFAFIASHDLKEPLRKVMAFGDRLHSRF-------GERLDEDG- 518

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl +++++a r+++Li+ lL +sr +
CP000478_2 519 ----------RDYLARMRKAAFRMQNLIESLLNYSRVTTK 548

CP000478_1383: domain 1 of 1, from 349 to 415: score 34.9, E = 1.5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++ +++H++++ L I+gy+e+ +++++e+
CP000478_1 349 ALGTLAGGIAHDFNNILGIIIGYSEM------------AHWNAEEGS 383

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p re l+ + +++ r ++L++++L +sr +++
CP000478_1 384 PI--------REDLQHVFKATTRARELVRQILAFSRRGEQ 415

CP000478_2378: domain 1 of 1, from 623 to 689: score 34.0, E = 2.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L I+gy+e+ + + +++
CP000478_2 623 AIGTLAGGIAHDFNNILGIILGYTEMGML----------KIDNRDIA 659

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l +l++++r +L++++L +sr +
CP000478_2 660 ----------EKSLAEVLKAGHRAKELVRQILAFSRHSEY 689

CP000478_1324: domain 1 of 1, from 447 to 513: score 33.8, E = 3.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L +I+gyae+Ll ++ ++
CP000478_1 447 AIGTLAGGIAHDFNNLLQVIQGYAEMLLF---------GKEQDDP-- 482

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ le i +a+r +L ++lL++sr +
CP000478_1 483 ---------FQKELEEIFFAAKRGGELTRQLLTFSRRIES 513

CP000478_0614: domain 1 of 1, from 82 to 156: score 32.8, E = 5.9e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e+ ++++HE+++PL+ I +e ++ +++++ +
CP000478_0 82 AIGELSSGIAHEINNPLAIIGQEVEWMKH---------QAKDAGT-- 117

peLRl...edpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e+ + l i ++++r++++ lLd++r +++
CP000478_0 118 ----GgggNLAEFLDSLMEIGKQVDRCREITHKLLDFARKREP 156

CP000478_0228: domain 1 of 1, from 465 to 531: score 31.8, E = 1.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++ +++H++++ LtaI+g+++l++ ++ ++
CP000478_0 465 SIGVLAGGIAHDFNNILTAIIGNISLAKL--------YGGQGGRV-- 501

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l ++r+ r +L ++lL++s+ +++
CP000478_0 502 ----------SEKLTEAERACMRAKNLTQQLLTFSKGGEP 531

CP000478_3485: domain 1 of 1, from 382 to 446: score 30.8, E = 2.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ LtaI+g+++l++ ++ +++
CP000478_3 382 SLGILAGGIAHDFNNILTAILGNISLAKIYA-----------RDKV- 416

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ le ++r++ ++L ++lL +++++a+
CP000478_3 417 ----------RKRLEEAERASAKARDLTQQLLSFAKAGAP 446

CP000478_1887: domain 1 of 1, from 245 to 306: score 30.7, E = 2.3e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ L aI+g+++l l +l+ + r+
CP000478_1 245 SLGVMAGGIAHDFNNLLMAIMGNLDLTLL----------DLPNDCRA 281

peLRledpeyreyletilreaerllrLindlLdls<-*
r +e ++++++r +L +++L +s
CP000478_1 282 ----------RTCVEQAYKASRRAGELTSQMLAYS 306

CP000478_2515: domain 1 of 1, from 302 to 367: score 30.1, E = 3.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ +++HE+R+PL +I g++ +++ ++ +e++ +
CP000478_2 302 AYARLAQAMAHEIRNPLMVIGGMVRRMRR---------PAPDEPEGA 339

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + + +++er++ ++++ + ++ +
CP000478_2 340 GM------------QAVMSSVERIETVLREVDGFVKLPPP 367

CP000478_2470: domain 1 of 1, from 146 to 214: score 29.2, E = 6.3e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +a++ HE+R PL I g+a ++ + +se++
CP000478_2 146 DVGKAVAHIGHEIRKPLVLIGGFAGQVER------CDSLRASEKD-- 184

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l++i +e++rl+ L++ l+ l+r +
CP000478_2 185 ----------RRKLRIIMDEIKRLETLLSSLRVLTRPPSS 214

CP000478_0646: domain 1 of 1, from 344 to 416: score 28.4, E = 1.1e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+++P++ I a l+++ + + ++ +e+ +
CP000478_0 344 SIGRLAAGVAHEINNPMAIINEKAGLMKD----LIGYGADFPEKAK- 385

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++++il++++r++++ +lL ++r +
CP000478_0 386 ---------FLSLIDSILNSVHRCRSITHRLLGFARRMEV 416


Histogram of all scores:
score obs exp (one = represents 13 sequences)
----- --- ---
-15 1 0|=
-14 4 0|=
-13 40 3|*===
-12 175 92|=======*======
-11 410 481|================================ *
-10 708 893|======================================================= *
-9 752 922|==========================================================*
-8 681 690|=====================================================*
-7 476 435|=================================*===
-6 308 250|===================*====
-5 190 137|==========*====
-4 96 73|=====*==
-3 66 38|==*===
-2 43 20|=*==
-1 22 10|*=
0 18 5|*=
1 6 2|*
2 6 1|*
3 0 0|
> 4 62 -|=====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 281.3799
P(chi-square) = 0

Total sequences searched: 4064

Whole sequence top hits:
tophits_s report:
Total hits: 53
Satisfying E cutoff: 53
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 53
Satisfying E cutoff: 53
Total memory: 42K


Acknowledgements:

This research is funded by:

Developed by: