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Thermotogae
Classification of phyla is from NCBI page
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35 projects found  

3 accessions found for Pelobacter propionicus DSM 2379  

Data for CP000482  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000482.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000482_2028 CDS_2209293-2211509 101.6 1.6e-28 1
CP000482_0891 CDS_952996-950063 98.9 9.5e-28 1
CP000482_1412 CDS_1537815-1535458 90.9 1.8e-25 1
CP000482_1848 CDS_2029150-2030964 90.8 1.9e-25 1
CP000482_1321 CDS_1423000-1420166 90.3 2.7e-25 1
CP000482_2684 CDS_2978038-2976332 88.2 1.1e-24 1
CP000482_3108 CDS_3462440-3464203 80.7 1.4e-22 1
CP000482_0429 CDS_457770-459008 72.3 3.3e-20 1
CP000482_2769 CDS_3076674-3079163 69.8 1.7e-19 1
CP000482_2968 CDS_3290090-3288420 67.2 9.3e-19 1
CP000482_2474 CDS_2720834-2719203 63.7 9.2e-18 1
CP000482_2924 CDS_3239004-3237826 63.4 1.1e-17 1
CP000482_2193 CDS_2401961-2403442 61.8 3.1e-17 1
CP000482_3032 CDS_3366744-3367853 61.4 4.1e-17 1
CP000482_0498 CDS_531833-530883 56.5 1e-15 1
CP000482_0699 CDS_737977-740193 53.5 6.9e-15 1
CP000482_1122 CDS_1186380-1184443 51.6 2.5e-14 1
CP000482_1152 CDS_1222686-1224269 50.5 4.9e-14 1
CP000482_2561 CDS_2820309-2822294 47.3 4e-13 2
CP000482_2686 CDS_2981175-2979445 47.0 4.9e-13 1
CP000482_0478 CDS_510328-511080 46.7 6.1e-13 1
CP000482_3001 CDS_3326982-3329846 46.2 8.4e-13 1
CP000482_2964 CDS_3283751-3280890 44.2 3e-12 1
CP000482_1121 CDS_1184333-1181382 41.5 1.8e-11 1
CP000482_3127 CDS_3489893-3488781 41.4 1.9e-11 1
CP000482_1576 CDS_1715752-1716954 41.0 2.5e-11 1
CP000482_0065 CDS_76163-78409 40.2 4.1e-11 1
CP000482_1879 CDS_2056927-2059911 37.5 2.4e-10 2
CP000482_1371 CDS_1490893-1488668 37.5 2.5e-10 1
CP000482_3303 CDS_3701976-3700534 37.1 3.1e-10 1
CP000482_2670 CDS_2949817-2952255 36.5 4.7e-10 1
CP000482_3361 CDS_3770506-3765140 35.4 9.6e-10 1
CP000482_2958 CDS_3273843-3276134 35.0 1.3e-09 1
CP000482_3102 CDS_3454408-3458337 34.9 1.3e-09 1
CP000482_2056 CDS_2249585-2247177 34.6 1.6e-09 1
CP000482_0892 CDS_955501-953144 33.8 2.8e-09 1
CP000482_0029 CDS_36010-34409 33.8 2.8e-09 1
CP000482_0413 CDS_441580-440204 33.4 3.4e-09 1
CP000482_2680 CDS_2970023-2967972 32.8 5.3e-09 1
CP000482_2688 CDS_2986694-2983812 32.4 6.6e-09 1
CP000482_2324 CDS_2552739-2549989 31.9 9.4e-09 1
CP000482_2574 CDS_2836797-2840201 30.1 3.1e-08 1
CP000482_0729 CDS_778385-780481 29.7 3.9e-08 1
CP000482_3117 CDS_3475407-3479327 27.1 2.2e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000482_2028 1/1 260 325 .. 1 87 [] 101.6 1.6e-28
CP000482_0891 1/1 293 358 .. 1 87 [] 98.9 9.5e-28
CP000482_1412 1/1 407 472 .. 1 87 [] 90.9 1.8e-25
CP000482_1848 1/1 220 285 .. 1 87 [] 90.8 1.9e-25
CP000482_1321 1/1 353 418 .. 1 87 [] 90.3 2.7e-25
CP000482_2684 1/1 340 408 .. 1 87 [] 88.2 1.1e-24
CP000482_3108 1/1 358 427 .. 1 87 [] 80.7 1.4e-22
CP000482_0429 1/1 192 257 .. 1 87 [] 72.3 3.3e-20
CP000482_2769 1/1 586 654 .. 1 87 [] 69.8 1.7e-19
CP000482_2968 1/1 339 407 .. 1 87 [] 67.2 9.3e-19
CP000482_2474 1/1 324 390 .. 1 87 [] 63.7 9.2e-18
CP000482_2924 1/1 137 205 .. 1 87 [] 63.4 1.1e-17
CP000482_2193 1/1 268 332 .. 1 87 [] 61.8 3.1e-17
CP000482_3032 1/1 144 210 .. 1 87 [] 61.4 4.1e-17
CP000482_0498 1/1 90 156 .. 1 87 [] 56.5 1e-15
CP000482_0699 1/1 520 591 .. 1 87 [] 53.5 6.9e-15
CP000482_1122 1/1 278 344 .. 1 87 [] 51.6 2.5e-14
CP000482_1152 1/1 146 212 .. 1 87 [] 50.5 4.9e-14
CP000482_2561 1/2 291 357 .. 1 87 [] 47.2 4.3e-13
CP000482_2686 1/1 349 417 .. 1 87 [] 47.0 4.9e-13
CP000482_0478 1/1 29 95 .. 1 87 [] 46.7 6.1e-13
CP000482_3001 1/1 573 639 .. 1 87 [] 46.2 8.4e-13
CP000482_2964 1/1 581 647 .. 1 87 [] 44.2 3e-12
CP000482_1121 1/1 613 679 .. 1 87 [] 41.5 1.8e-11
CP000482_3127 1/1 147 215 .. 1 87 [] 41.4 1.9e-11
CP000482_1576 1/1 33 99 .. 1 87 [] 41.0 2.5e-11
CP000482_0065 1/1 379 445 .. 1 87 [] 40.2 4.1e-11
CP000482_1371 1/1 523 593 .. 1 87 [] 37.5 2.5e-10
CP000482_3303 1/1 248 320 .. 1 87 [] 37.1 3.1e-10
CP000482_1879 1/2 624 689 .. 1 87 [] 37.0 3.3e-10
CP000482_2670 1/1 446 512 .. 1 87 [] 36.5 4.7e-10
CP000482_3361 1/1 1556 1622 .. 1 87 [] 35.4 9.6e-10
CP000482_2958 1/1 517 578 .. 1 82 [. 35.0 1.3e-09
CP000482_3102 1/1 931 997 .. 1 87 [] 34.9 1.3e-09
CP000482_2056 1/1 438 504 .. 1 87 [] 34.6 1.6e-09
CP000482_0892 1/1 427 493 .. 1 87 [] 33.8 2.8e-09
CP000482_0029 1/1 310 376 .. 1 87 [] 33.8 2.8e-09
CP000482_0413 1/1 241 307 .. 1 87 [] 33.4 3.4e-09
CP000482_2680 1/1 427 529 .. 1 87 [] 32.8 5.3e-09
CP000482_2688 1/1 734 796 .. 1 81 [. 32.4 6.6e-09
CP000482_2324 1/1 547 613 .. 1 87 [] 31.9 9.4e-09
CP000482_2574 1/1 767 833 .. 1 87 [] 30.1 3.1e-08
CP000482_0729 1/1 457 523 .. 1 87 [] 29.7 3.9e-08
CP000482_3117 1/1 1083 1153 .. 1 87 [] 27.1 2.2e-07

Alignments of top-scoring domains:
CP000482_2028: domain 1 of 1, from 260 to 325: score 101.6, E = 1.6e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+R P+++I+g+a+l++ tel++eq
CP000482_2 260 AKSEFLANMSHEIRSPMNGIMGMAQLMEY---------TELTDEQ-- 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
reyl++i+++++ ll+Lin++Ldls+ieag
CP000482_2 296 ----------REYLNVIRSSSHGLLSLINNILDLSKIEAG 325

CP000482_0891: domain 1 of 1, from 293 to 358: score 98.9, E = 9.5e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP+++++g++elLl t l+ +q
CP000482_0 293 AKSEFLANMSHEIRTPMNGVLGMTELLLG---------TLLNGKQ-- 328

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ eti++++e ll++ind+Ld+s+ieag
CP000482_0 329 ----------RQFAETIRNSGEALLAIINDILDFSKIEAG 358

CP000482_1412: domain 1 of 1, from 407 to 472: score 90.9, E = 1.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP+++++g+++lL + + l+e q
CP000482_1 407 AKSQFLANMSHEIRTPMNGVLGMLDLLMD---------SRLDENQ-- 442

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++ +a+ ll++ind+Ld+s+ieag
CP000482_1 443 ----------LRLASMAHGSADKLLEIINDILDFSKIEAG 472

CP000482_1848: domain 1 of 1, from 220 to 285: score 90.8, E = 1.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++flan+sHELRTP+t+++g+++l+le +el +
CP000482_1 220 AKDQFLANMSHELRTPMTGVLGMLQLALE---------EELAPTL-- 255

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl t++++a++ll+++nd+Ld+++ieag
CP000482_1 256 ----------RNYLGTAHSSANSLLQILNDILDMTKIEAG 285

CP000482_1321: domain 1 of 1, from 353 to 418: score 90.3, E = 2.7e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP++a++g+++lL++ tels+ q
CP000482_1 353 AKSRFLANMSHEIRTPMNAVLGLLHLLQR---------TELSPRQ-- 388

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+e+++ ++++ll ++nd+Ld+s+iea
CP000482_1 389 ----------HDYIEKVQMASRSLLGILNDILDFSKIEAD 418

CP000482_2684: domain 1 of 1, from 340 to 408: score 88.2, E = 1.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fla++sHELRTPL++I+g++ +Ll +l +++ ++eq
CP000482_2 340 LKSAFLATMSHELRTPLNSIIGFTGILLQGL------SGPINDEQ-- 378

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l ++++a++ll+Li+d+Ld+s+ieag
CP000482_2 379 ----------AKQLGMVKNSANHLLSLISDVLDISKIEAG 408

CP000482_3108: domain 1 of 1, from 358 to 427: score 80.7, E = 1.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHELRTP+++I+gyae+L d se++++
CP000482_3 358 MRRDFVANVSHELRTPVSVIKGYAETLMQ-------NDMLVSEPEHA 397

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e+i+r aerl Lind+L+ls +ea
CP000482_3 398 ----------TRFVEIIRRHAERLTTLINDILTLSCLEAR 427

CP000482_0429: domain 1 of 1, from 192 to 257: score 72.3, E = 3.3e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++a+++H++R+PL++I+++++l++ +++q
CP000482_0 192 AMGYLAAGMAHDIRNPLNSISLFTQLMRQ---------NSIDPDQ-- 227

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl +i++e+er++++i+ lL +s +
CP000482_0 228 ----------EEYLGKIIKEIERIDAIIRKLLNMSSRSRN 257

CP000482_2769: domain 1 of 1, from 586 to 654: score 69.8, E = 1.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+f+ +sHELRTP+ a+++ ++ + e++ +++ ++e
CP000482_2 586 MKSDFVTIASHELRTPIQAMLLSISGIMEGY------SGTIDDEV-- 624

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+++++ +erl rL+++lL lsriea
CP000482_2 625 ----------REDLQVARQGIERLMRLVENLLNLSRIEAR 654

CP000482_2968: domain 1 of 1, from 339 to 407: score 67.2, E = 9.3e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ ++sH+LR+PL aI g++++Llee++ + l++e
CP000482_2 339 ELESFAYSVSHDLRQPLRAIDGFSQALLEEYN------DRLDDEG-- 377

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
reyl +++ ++r+ Li+++L lsr+ +
CP000482_2 378 ----------REYLGRLRAGSQRMGILIDNILRLSRLSRE 407

CP000482_2474: domain 1 of 1, from 324 to 390: score 63.7, E = 9.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++a ++HE+R+PL+a++g ++lL + ++ e +
CP000482_2 324 VLGSLAARMAHEIRNPLAAMSGSVQLLAD--------HGTVAEND-- 360

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +ilre++rl++Li +L+++r ++
CP000482_2 361 ----------QRLLAIILRETDRLNALITSFLTYARPVSP 390

CP000482_2924: domain 1 of 1, from 137 to 205: score 63.4, E = 1.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f+++lsH++++P+ta++g +++++e + ++ + eq
CP000482_2 137 EKDDFVSMLSHDMKNPITAVIGSIDIMRE------GCLGPVDQEQ-- 175

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
eyl++++++ + ++i++lLd+ r eag
CP000482_2 176 ----------SEYLQSAIDSCNEVVAMIDNLLDIHRFEAG 205

CP000482_2193: domain 1 of 1, from 268 to 332: score 61.8, E = 3.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a++sHELRTPL+ +rg +e++++ + + +
CP000482_2 268 SRRQWVADISHELRTPLAILRGEIEAIQD---------GIRQPTP-- 303

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++++ e+ +l rL++dl +ls + g
CP000482_2 304 -----------QTIQSLHGEVLHLGRLVDDLYQLSMSDVG 332

CP000482_3032: domain 1 of 1, from 144 to 210: score 61.4, E = 4.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++a+l+HE ++PL +I+g+a+lL+ el +e
CP000482_3 144 TLGTLAAGLAHEVKNPLGGIKGAAQLLEQ----------ELAAES-- 178

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e ey+++++re+er++r+i++lL+l+ +
CP000482_3 179 --------ELLEYTRVMIRETERIDRIIRELLELASPRGL 210

CP000482_0498: domain 1 of 1, from 90 to 156: score 56.5, E = 1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f++ + HEL+ PL++I++++e+++ +l+ e +
CP000482_0 90 NQRTFISQVTHELKSPLASIQLHLETIRL---------RTLPQERL- 126

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++t+l ++erl Lin+lL +r+e+
CP000482_0 127 ----------DAFVNTMLADTERLHYLINNLLMAARLEQR 156

CP000482_0699: domain 1 of 1, from 520 to 591: score 53.5, E = 6.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e ++ ++HE+++PLt I++ a+ L++++ + s++++
CP000482_0 520 AWREVARRIAHEIKNPLTPIQLSAQRLRKRY------LSRFSDDEKV 560

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e +e i+++++ l +L+n++ ++r+ a
CP000482_0 561 ---------FDECTEMIIKSVDDLKNLVNEFSNFARMPAI 591

CP000482_1122: domain 1 of 1, from 278 to 344: score 51.6, E = 2.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ LtaI+gy lL++ ++e++
CP000482_1 278 AVGQLAGGVAHDFNNILTAIIGYGNLLQM---------KVGGDETL- 314

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++ il +aer L n lL +sr
CP000482_1 315 ----------EKYVNQILYSAERAATLTNSLLAFSRKHII 344

CP000482_1152: domain 1 of 1, from 146 to 212: score 50.5, E = 4.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ LtaI+gy+e+++ ++ +e++
CP000482_1 146 SVGRLAGGVAHDFNNILTAILGYSEIARL---------RAAHDEKL- 182

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l++i++++ +L+++lL +sr +
CP000482_1 183 ----------AECLDIIHDSGMKAASLVRQLLIFSRKSTL 212

CP000482_2561: domain 1 of 2, from 291 to 357: score 47.2, E = 4.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ LtaI+g+ae++ + + e++++
CP000482_2 291 AVGQLAGGIAHDFNNILTAIIGFAEVMDM--------RMEQGAPL-- 327

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++ il +aer +L + lL +sr +
CP000482_2 328 ----------RHHVRQILAAAERAADLTQGLLAFSRKQVL 357

CP000482_2686: domain 1 of 1, from 349 to 417: score 47.0, E = 4.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+ ++sH+LR PL +I+ ++ L+ ++ ++ +++ +
CP000482_2 349 EIEQFIYTVSHDLRGPLVTIKSFLGYLEQDM-------EAVDSKRI- 387

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ i+ +a+ +++L+ +lL+lsri+
CP000482_2 388 ----------GQDLHFIHTAADKMEELLVELLELSRIGRR 417

CP000482_0478: domain 1 of 1, from 29 to 95: score 46.7, E = 6.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++ a++ HEL+ PL++I +a+++l+ +t+ +e
CP000482_0 29 ELGRMSAGIVHELNAPLSVIASAAQMILR--------ETDVPEFV-- 65

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++ +i ea+rl++L + +L ls ++
CP000482_0 66 ----------REMVGRIGVEAQRLSHLARGMLSLSCRDST 95

CP000482_3001: domain 1 of 1, from 573 to 639: score 46.2, E = 8.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ LtaI+gy +Ll++l + +++
CP000482_3 573 AIGQLAGGIAHDFNNILTAILGYGNILLMKL--------PVDSPS-- 609

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ + il +aer L + lL++sr ++
CP000482_3 610 ----------RKTADQILAAAERGAGLTQGLLTFSRKQSS 639

CP000482_2964: domain 1 of 1, from 581 to 647: score 44.2, E = 3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++ +++H++++ Lt+I+g+++l ++ + + +
CP000482_2 581 SIGLLAGGIAHDFNNLLTSILGNISLTRM---------QVGEGDRL- 617

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+ +++++ r +L ++lL++sr +a+
CP000482_2 618 ----------RRNLDEAEKASLRAKDLTQQLLTFSRGGAP 647

CP000482_1121: domain 1 of 1, from 613 to 679: score 41.5, E = 1.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+gyae+Ll + e+
CP000482_1 613 AIGQLAGGVAHDFNNILTVIIGYAEILLL--------SMEREHAL-- 649

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +e +l +a r +L lL +sr +
CP000482_1 650 ----------RYHVEQVLTAAGRAAELTAGLLAFSRKQLL 679

CP000482_3127: domain 1 of 1, from 147 to 215: score 41.4, E = 1.9e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s fl+ +sH LRTP+t I++ +e L + +++ +
CP000482_3 147 LRSGFLSLISHKLRTPITNISLILEYLDQ---------SVCGSGAN- 183

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ r+++ t+ +ea +l rL+++lL +s+ g
CP000482_3 184 --------GCRQAIATAGEEASYLGRLVDELLLFSQVMGG 215

CP000482_1576: domain 1 of 1, from 33 to 99: score 41.0, E = 2.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++ +++H++++ Lt+I+g++ lL++ +++ +++
CP000482_1 33 CIGTLAGGVAHDFNNILTVIIGACTLLEM---------NAADYPDQ- 69

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++i++ aer +L +dlL +sr +a
CP000482_1 70 ----------MPFVSRIRNYAERAAQLTQDLLIFSRRQAV 99

CP000482_0065: domain 1 of 1, from 379 to 445: score 40.2, E = 4.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ Lt+I+g+++++++ +++ +
CP000482_0 379 SLGVLAGGIAHDFNNILTGIMGNISMARM--------VLAMPGKS-- 415

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ ++++a r +L +lL++++ +a+
CP000482_0 416 ----------DKLLDNAEKAALRATELATQLLTFAKGGAP 445

CP000482_1371: domain 1 of 1, from 523 to 593: score 37.5, E = 2.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++ n++H+ R+PL+++ + ++ L + ++gd+els e +
CP000482_1 523 AMGEMIENIAHQWRQPLNTLGLILQELPM-----THGDGELSREYL- 563

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e++ +++ ++++ ind+ + r + +
CP000482_1 564 ----------DDAVERAMEQILHMSQTINDFSNFFRPDKQ 593

CP000482_3303: domain 1 of 1, from 248 to 320: score 37.1, E = 3.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++++++HE+R+PL+ I+++++ L+ee+ +++ qr+
CP000482_3 248 RVGQLASGIAHEIRNPLNYISLAIDHLKEEM------LPHCAGAQRA 288

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +e+ ++i++e++r + ++ +++ + r
CP000482_3 289 EM--------EELADKIKEEVRRANYMVVNFMSYGRPLKL 320

CP000482_1879: domain 1 of 2, from 624 to 689: score 37.0, E = 3.3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++ +++H++++ L++I+g + l++ +e s +
CP000482_1 624 SIGSLAGGVAHDFNNKLSVILGCTYLAQS---------EEDSNKR-- 659

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +le i+++ae+ +L ++lL ++r ++
CP000482_1 660 ----------QHFLEEIQKAAEQSADLTRQLLAFARKQTI 689

CP000482_2670: domain 1 of 1, from 446 to 512: score 36.5, E = 4.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++ +++H++++ Lt+I+g+a+l+++ s+++r+
CP000482_2 446 SVGLLAGGIAHDFNNILTGILGNASLAKM----------LFSPQDRA 482

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++ i+++a r +L ++L++s+ +a+
CP000482_2 483 ----------YAYVSNIESAAYRAKDLTLQFLTFSKGGAP 512

CP000482_3361: domain 1 of 1, from 1556 to 1622: score 35.4, E = 9.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ LtaI+g+++l+++ ++ ++
CP000482_3 1556 SLGLLAGGIAHDFNNLLTAILGNISLAQM---------LVPGDGKL- 1592

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +++ + r L ++lL+++r +a+
CP000482_3 1593 ----------YKLLTQAEKTSLRAGILTRQLLTFARGGAP 1622

CP000482_2958: domain 1 of 1, from 517 to 578: score 35.0, E = 1.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ Lt+I+g+++l ++ l++ +
CP000482_2 517 SLGILAGGIAHDFNNLLTVIIGNLDLVRR---------RLLPDSPT- 553

peLRledpeyreyletilreaerllrLindlLdls<-*
r +e+++ + ++ +Li ++Ld++
CP000482_2 554 ----------RGNIESAQAACQQAAKLIGQILDYT 578

CP000482_3102: domain 1 of 1, from 931 to 997: score 34.9, E = 1.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++a+++H++++ L++I+gy+el l+++ + ++
CP000482_3 931 AIGTLAAGIAHDFNNILSGIMGYTELSLNKV--------KEQPKV-- 967

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e +l +a+r +L+ ++L++ r +
CP000482_3 968 ----------YRNMEQVLTAANRAKDLVKQILTFCRKAHH 997

CP000482_2056: domain 1 of 1, from 438 to 504: score 34.6, E = 1.6e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++ +++H++++ LtaI+g+++l+++ + +
CP000482_2 438 SIGVLAGGIAHDFNNLLTAILGNISLAKM---------LVSEGDRM- 474

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ +++++ r L ++lL++sr +a+
CP000482_2 475 ----------FRNLDEAEKASLRAKGLTQQLLTFSRGGAP 504

CP000482_0892: domain 1 of 1, from 427 to 493: score 33.8, E = 2.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ LtaI+g+++l++ +l + +++
CP000482_0 427 SLGVLAGGIAHDFNNILTAILGNISLARLQL--------NDTAKV-- 463

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ le ++ ++ r +L ++l +++r +++
CP000482_0 464 ----------TKRLEEAETATTRAKDLTRQLITFARGGEP 493

CP000482_0029: domain 1 of 1, from 310 to 376: score 33.8, E = 2.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +++++H + +PL +I g+a +l+ +t+ +++
CP000482_0 310 LVGRITSSIAHSIHNPLMVIGGFARSILK--------STPEADPK-- 346

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++e+i ea++l++ ++++L +s +
CP000482_0 347 ----------RGFIESIVGEARHLEDVLDEILNYSDSLYP 376

CP000482_0413: domain 1 of 1, from 241 to 307: score 33.4, E = 3.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++a l+HEL++PL +I g++ L ++l + +++
CP000482_0 241 AVGEMAAKLAHELKNPLITIGGFSWRLIKNL--------ATESPE-- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y ++i +e+ rl+r++ d+L ++
CP000482_0 278 ----------YRYADIISKEVCRLERMLTDILSFTSKPMV 307

CP000482_2680: domain 1 of 1, from 427 to 529: score 32.8, E = 5.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldk..........vlag
+ ++++a+++HE+++P+ I+ ++ +L ++ldk + ++ ++ +
CP000482_2 427 SIGQLAAGVAHEINNPMGFISSNLTTLGKYLDKlrafetamigLMER 473

dtelseeqrlpeLR..l....edpeyreyletilreaerllrLindlLdl
d++ l+eLR++ + + + ++ +le ++ aer +r+++dl +
CP000482_2 474 DGNSETLGELKELRrnMkidyILGDIQGLLEESHEGAERVRRIVQDLKSF 523

srieag<-*
sr ++
CP000482_2 524 SRVDEA 529

CP000482_2688: domain 1 of 1, from 734 to 796: score 32.4, E = 6.6e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L+ P+ +I++++ L++++ + + e +
CP000482_2 734 ELERFTYTVSHDLKSPVVTISAFLGYLEADM-------KNGDQERI- 772

peLRledpeyreyletilreaerllrLindlLdl<-*
+ + i+ +a+ + L+ +lL++
CP000482_2 773 ----------GKDIGYIRTAADKMGFLLGELLEF 796

CP000482_2324: domain 1 of 1, from 547 to 613: score 31.9, E = 9.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L +I+g+ae+L +l++ + l
CP000482_2 547 AIGQLAGGVAHDFNNMLGGIIGNAEMLAL----------KLGSGHPL 583

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++til ++e L ++lL +sr ++
CP000482_2 584 ----------QKHVSTILTASENAAGLTQRLLIFSRKGNV 613

CP000482_2574: domain 1 of 1, from 767 to 833: score 30.1, E = 3.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ L++I+g+++l +ld ++ + r
CP000482_2 767 SLGLLAGGIAHDFNNILSGILGNISLVCSRLD------PDDPLASR- 806

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++ ++++ r L ++lL+++r +++
CP000482_2 807 -------------LKSCEKATIRATGLTRQLLTFARGGEP 833

CP000482_0729: domain 1 of 1, from 457 to 523: score 29.7, E = 3.9e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L +I+gy+ l+++ + e+++e
CP000482_0 457 AVGILAGGMAHDFNNLLQSIMGYIFLARM--------SVEADSEA-- 493

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
reyl+ +++ + + ++L ++lL lsr +
CP000482_0 494 ----------REYLDEAEKISGQASELGQRLLLLSRGGVA 523

CP000482_3117: domain 1 of 1, from 1083 to 1153: score 27.1, E = 2.2e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++a+++H+ R+PL+a+++++ ++ ++++ el++e +
CP000482_3 1083 AMGEMIAHIAHQWRQPLNALSLMLADIEG-----AQSYNELTPEYL- 1123

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l ++ +++ i+d++ + + + +
CP000482_3 1124 ----------QQSLVDCNILIQKMSSTIDDFRNFFKPDKE 1153


Histogram of all scores:
score obs exp (one = represents 12 sequences)
----- --- ---
-14 9 0|=
-13 41 2|*===
-12 129 81|======*====
-11 319 423|=========================== *
-10 545 786|============================================== *
-9 665 812|======================================================== *
-8 590 608|==================================================*
-7 484 383|===============================*=========
-6 271 220|==================*====
-5 222 120|=========*=========
-4 109 64|=====*====
-3 57 34|==*==
-2 36 17|=*=
-1 15 9|*=
0 15 4|*=
1 5 2|*
2 4 1|*
3 0 0|
4 2 0|=
5 0 0|
6 1 0|=
7 0 0|
8 1 0|=
> 9 56 -|=====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 344.0073
P(chi-square) = 0

Total sequences searched: 3576

Whole sequence top hits:
tophits_s report:
Total hits: 44
Satisfying E cutoff: 44
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 44
Satisfying E cutoff: 44
Total memory: 38K


Acknowledgements:

This research is funded by:

Developed by: