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Classification of phyla is from NCBI page
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41 projects found  

1 accessions found for Flavobacterium johnsoniae UW101  

Data for CP000685  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000685.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000685_4676 CDS_5691301-5695353 97.7 3e-27 1
CP000685_3897 CDS_4676058-4674070 94.6 2.2e-26 1
CP000685_4213 CDS_5113623-5115584 94.5 2.5e-26 1
CP000685_0634 CDS_698889-701330 84.8 1.3e-23 1
CP000685_1964 CDS_2285644-2283977 84.4 1.7e-23 1
CP000685_3330 CDS_4014674-4011105 80.1 3e-22 1
CP000685_0540 CDS_578087-577002 69.2 3.5e-19 1
CP000685_2068 CDS_2456043-2460164 68.5 5.5e-19 1
CP000685_2862 CDS_3417707-3416307 68.1 7.1e-19 1
CP000685_4535 CDS_5534113-5531924 65.7 3.4e-18 1
CP000685_0228 CDS_240076-242250 63.7 1.3e-17 1
CP000685_3835 CDS_4579875-4584029 60.4 1.1e-16 1
CP000685_3099 CDS_3702600-3698566 56.9 1.1e-15 1
CP000685_3845 CDS_4606298-4602177 56.3 1.6e-15 1
CP000685_2012 CDS_2365505-2361555 56.0 2e-15 1
CP000685_2718 CDS_3260360-3258999 55.8 2.3e-15 1
CP000685_3437 CDS_4128483-4126897 54.6 4.9e-15 1
CP000685_4930 CDS_6005881-6007149 54.1 6.7e-15 1
CP000685_4163 CDS_5034626-5038828 52.4 2e-14 1
CP000685_3181 CDS_3818170-3815480 51.8 2.9e-14 1
CP000685_3719 CDS_4441316-4442824 47.2 6e-13 1
CP000685_1950 CDS_2269682-2268249 46.6 9.1e-13 1
CP000685_3336 CDS_4019518-4022724 46.4 1e-12 1
CP000685_3762 CDS_4492345-4489859 45.7 1.6e-12 1
CP000685_4262 CDS_5184633-5185988 45.4 2e-12 1
CP000685_1615 CDS_1870078-1871343 44.7 3.2e-12 1
CP000685_3032 CDS_3614023-3615297 41.7 2.2e-11 1
CP000685_3375 CDS_4063769-4062366 41.4 2.6e-11 1
CP000685_3796 CDS_4531186-4532682 39.4 9.7e-11 1
CP000685_3331 CDS_4015907-4014690 38.2 2.1e-10 1
CP000685_4481 CDS_5462188-5463546 37.9 2.6e-10 1
CP000685_0933 CDS_1051328-1049913 37.1 4.5e-10 1
CP000685_2305 CDS_2785867-2784083 36.8 5.3e-10 1
CP000685_3891 CDS_4664835-4666202 36.6 5.9e-10 1
CP000685_3983 CDS_4792839-4794095 31.2 2e-08 1
CP000685_4803 CDS_5858845-5862864 29.7 5.4e-08 1
CP000685_4442 CDS_5401728-5403236 27.9 1.7e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000685_4676 1/1 969 1034 .. 1 87 [] 97.7 3e-27
CP000685_3897 1/1 182 247 .. 1 87 [] 94.6 2.2e-26
CP000685_4213 1/1 176 241 .. 1 87 [] 94.5 2.5e-26
CP000685_0634 1/1 322 387 .. 1 87 [] 84.8 1.3e-23
CP000685_1964 1/1 334 402 .. 1 87 [] 84.4 1.7e-23
CP000685_3330 1/1 518 586 .. 1 87 [] 80.1 3e-22
CP000685_0540 1/1 124 191 .. 1 87 [] 69.2 3.5e-19
CP000685_2068 1/1 852 918 .. 1 87 [] 68.5 5.5e-19
CP000685_2862 1/1 239 305 .. 1 87 [] 68.1 7.1e-19
CP000685_4535 1/1 357 422 .. 1 87 [] 65.7 3.4e-18
CP000685_0228 1/1 358 423 .. 1 87 [] 63.7 1.3e-17
CP000685_3835 1/1 848 914 .. 1 87 [] 60.4 1.1e-16
CP000685_3099 1/1 833 900 .. 1 87 [] 56.9 1.1e-15
CP000685_3845 1/1 846 914 .. 1 87 [] 56.3 1.6e-15
CP000685_2012 1/1 817 883 .. 1 87 [] 56.0 2e-15
CP000685_2718 1/1 232 298 .. 1 87 [] 55.8 2.3e-15
CP000685_3437 1/1 302 370 .. 1 87 [] 54.6 4.9e-15
CP000685_4930 1/1 198 266 .. 1 87 [] 54.1 6.7e-15
CP000685_4163 1/1 872 938 .. 1 87 [] 52.4 2e-14
CP000685_3181 1/1 666 734 .. 1 87 [] 51.8 2.9e-14
CP000685_3719 1/1 272 340 .. 1 87 [] 47.2 6e-13
CP000685_1950 1/1 258 323 .. 1 87 [] 46.6 9.1e-13
CP000685_3336 1/1 835 903 .. 1 87 [] 46.4 1e-12
CP000685_3762 1/1 589 654 .. 1 87 [] 45.7 1.6e-12
CP000685_4262 1/1 231 297 .. 1 87 [] 45.4 2e-12
CP000685_1615 1/1 200 266 .. 1 87 [] 44.7 3.2e-12
CP000685_3032 1/1 217 282 .. 1 87 [] 41.7 2.2e-11
CP000685_3375 1/1 230 296 .. 1 87 [] 41.4 2.6e-11
CP000685_3796 1/1 276 344 .. 1 87 [] 39.4 9.7e-11
CP000685_3331 1/1 172 239 .. 1 87 [] 38.2 2.1e-10
CP000685_4481 1/1 233 301 .. 1 87 [] 37.9 2.6e-10
CP000685_0933 1/1 254 325 .. 1 87 [] 37.1 4.5e-10
CP000685_2305 1/1 362 430 .. 1 87 [] 36.8 5.3e-10
CP000685_3891 1/1 235 296 .. 1 82 [. 36.6 5.9e-10
CP000685_3983 1/1 193 258 .. 1 87 [] 31.2 2e-08
CP000685_4803 1/1 1106 1174 .. 1 87 [] 29.7 5.4e-08
CP000685_4442 1/1 272 340 .. 1 87 [] 27.9 1.7e-07

Alignments of top-scoring domains:
CP000685_4676: domain 1 of 1, from 969 to 1034: score 97.7, E = 3e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+flan+sHE+RTPL++I+g+++lL + tel e q
CP000685_4 969 SKSDFLANMSHEIRTPLNGIIGFTHLLMK---------TELEEIQ-- 1004

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ti ++a++ll++ind+Ld+s+ieag
CP000685_4 1005 ----------EKYMTTINQSAHSLLEIINDILDFSKIEAG 1034

CP000685_3897: domain 1 of 1, from 182 to 247: score 94.6, E = 2.2e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ flan+sHE+RTPL+aI+g+++lL t+l++ q
CP000685_3 182 AKDSFLANMSHEIRTPLNAIIGFTDLLAQ---------TKLNAVQ-- 217

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y+++++ ++e ll ++nd+Ldls++e+g
CP000685_3 218 ----------RDYINSVQIAGENLLLIVNDILDLSKMESG 247

CP000685_4213: domain 1 of 1, from 176 to 241: score 94.5, E = 2.5e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ flan+sHE+RTPL+aI+g++elL t+l+ +q
CP000685_4 176 AKESFLANMSHEIRTPLNAIIGFTELLSG---------TPLDKQQ-- 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ ++ ++e ll ++nd+Ldls+ie+g
CP000685_4 212 ----------QAFIQDVQTAGENLLLIVNDILDLSKIESG 241

CP000685_0634: domain 1 of 1, from 322 to 387: score 84.8, E = 1.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++++++sH+L+TPL++I gy+elL + ++ + +q
CP000685_0 322 SREQLISTVSHDLKTPLSTIVGYSELLGN---------SDINTKQ-- 357

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i++++e++ +L++dlLd+srieag
CP000685_0 358 ----------SYFIKNIKNSSEYITQLVQDLLDFSRIEAG 387

CP000685_1964: domain 1 of 1, from 334 to 402: score 84.4, E = 1.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+a++sHEL+TP+++I++ ++lL++ ++ ++++++q
CP000685_1 334 AKTNFIATVSHELKTPIASIKLSLQLLEN------GKTGDMNDDQ-- 372

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++e+i+++++rll++ +lL ls++e+g
CP000685_1 373 ----------KQLVESIKDDSQRLLKITGELLNLSQLETG 402

CP000685_3330: domain 1 of 1, from 518 to 586: score 80.1, E = 3e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++I++++ lL e+ + + ++ e++
CP000685_3 518 YKSEFLANMSHELRTPLNSILLLSRLLSENNN------QSMNNEEI- 557

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ ++i++++++ll Li+++Ldls+ieag
CP000685_3 558 -----------EFAKVIQSSGNSLLGLIDEILDLSKIEAG 586

CP000685_0540: domain 1 of 1, from 124 to 191: score 69.2, E = 3.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++efl n+sHEL+TPL +++gy+++Ll+ +++++++++
CP000685_0 124 YRREFLGNVSHELKTPLFTVQGYVSTLLD---------GAMDDKHIR 161

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+++++ +erl +++dl ++++e+g
CP000685_0 162 ----------KKYLKRAEKGVERLIYIVEDLDMITKLESG 191

CP000685_2068: domain 1 of 1, from 852 to 918: score 68.5, E = 5.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ n+sHE+RTPLt I+g +e Ll ++e+++
CP000685_2 852 MKLDFFTNVSHEIRTPLTLISGPVEELLS--------SAEKNSNL-- 888

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ti++ ++rll+L+n+l+d+ ++e g
CP000685_2 889 ----------EQKLKTIKNNSDRLLKLVNELMDFRKAEKG 918

CP000685_2862: domain 1 of 1, from 239 to 305: score 68.1, E = 7.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f++++sHELRTPLt+I+g++e+L + ++++ +
CP000685_2 239 REKQFTSDASHELRTPLTVIKGTLEVLIR---------KPRDSRE-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++ ++ ++e+++l+ L+++lL+++r e++
CP000685_2 275 ---------YEDKINYCINEVDHLNMLVDQLLTMARFENQ 305

CP000685_4535: domain 1 of 1, from 357 to 422: score 65.7, E = 3.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f++++sHELRTPL ++ g + +Lle +++ q
CP000685_4 357 LKTQFISTISHELRTPLYGVVGITNMLLE---------EHKELSQ-- 392

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ ++ +a++ll+L+nd+L++ +ie++
CP000685_4 393 ----------SQHLSALKFSARYLLSLVNDILQINKIEEN 422

CP000685_0228: domain 1 of 1, from 358 to 423: score 63.7, E = 1.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+sefl+++sHELRTPL+aI g ++lLle + + + +
CP000685_0 358 ARSEFLSTVSHELRTPLNAINGITHLLLE----------DNPKKAQ- 393

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yle+++ ++++l in++L++ +i++
CP000685_0 394 ----------LKYLESLKFSGNYLTTFINEILEINKIDST 423

CP000685_3835: domain 1 of 1, from 848 to 914: score 60.4, E = 1.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +f+ n+sHE+RTPLt I+ +e +l+ + +ls+e
CP000685_3 848 KKLQFFTNISHEFRTPLTLIINPLEDILR--------SKKLSPEI-- 884

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++++++++rl+rLin+l+d+ ++e +
CP000685_3 885 ----------HNKLKIVHKSSDRLSRLINELMDFNKLEFN 914

CP000685_3099: domain 1 of 1, from 833 to 900: score 56.9, E = 1.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ n+sHELRTPLt I+g a+ Ll+e +++++ +
CP000685_3 833 EKLRFFTNISHELRTPLTLILGPAKQLLDEN-------SNATDYE-- 870

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i++ a rll+L+n++Ld+ ++++g
CP000685_3 871 ----------KSRYNLIYQNASRLLNLVNQVLDFRKAQSG 900

CP000685_3845: domain 1 of 1, from 846 to 914: score 56.3, E = 1.6e-15
*->akseflanlsHELRTPLtaIrg.yaelLleeldkvlagdtelseeqr
k +f+ n+sHE+RTPLt I+ ++a+lL++++ tels
CP000685_3 846 KKLQFFTNISHEFRTPLTLILNpLADLLKNNS-------TELSNGV- 884

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ti+++++rl+rLin+l+d+ +++ +
CP000685_3 885 -----------LNKLQTIQKSSDRLSRLINELMDFNQLQFN 914

CP000685_2012: domain 1 of 1, from 817 to 883: score 56.0, E = 2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +f+ n++HE+RTPLt I+g +e Ll +++s+e
CP000685_2 817 AKIDFFTNVAHEIRTPLTLIKGPLEKLLV--------MEHKSPEV-- 853

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+++++ + rll+L+n+lLd+ + e g
CP000685_2 854 ----------PQNLSIMKKNTSRLLKLVNELLDFRKSEIG 883

CP000685_2718: domain 1 of 1, from 232 to 298: score 55.8, E = 2.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ef+a++sHELRTPL+ I + +e + d++ s +
CP000685_2 232 RQKEFTAHASHELRTPLSRITAQIENTIA--------DSTTSLKG-- 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l il+++++l +Li+ lL ls+i+++
CP000685_2 269 ----------KNFLTAILSDVNHLTELISSLLILSKIDNN 298

CP000685_3437: domain 1 of 1, from 302 to 370: score 54.6, E = 4.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+ HE++TP+++I +++++++ ++ e e+
CP000685_3 302 IKTDFINNMTHEFKTPIATINLALDAIRS------PKVIEDKEKV-- 340

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ i++e +r+ ++++++L +s++e
CP000685_3 341 ----------YRYLQMIRDENKRMHAQVENVLRISKLEKR 370

CP000685_4930: domain 1 of 1, from 198 to 266: score 54.1, E = 6.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ n+ HE++TPL++I+ +++ L e++ + ++++++
CP000685_4 198 LQRDFINNMTHEFKTPLSSILIASKYLSEQS-------PIKDDKKL- 236

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+e+i+++++ l++ ++ +L ++ ++
CP000685_4 237 ----------YTYTEIIINQSHKLNHHVEKILNVAKSDHT 266

CP000685_4163: domain 1 of 1, from 872 to 938: score 52.4, E = 2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +f+ n+sHE+RTPLt I+g ++ +l+++ + + e
CP000685_4 872 LKLDFFTNISHEFRTPLTLILGPLQQILADY--------NGTNEM-- 908

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l +i+ +a++ll+Lin+l+d+ ++e+
CP000685_4 909 ----------YKKLLVIEGSANHLLSLINRLMDFRKLENH 938

CP000685_3181: domain 1 of 1, from 666 to 734: score 51.8, E = 2.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+L+ P+ I+++++ L+++l+ ++l++
CP000685_3 666 DLQQFAHVASHDLKEPVRKIKTFISRLEDNLE------GKLDDSA-- 704

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++++i+ +++r+ ++i+ +L +s+i a
CP000685_3 705 ----------KKFIDRIHVASDRMFNMIEGVLAYSKINAD 734

CP000685_3719: domain 1 of 1, from 272 to 340: score 47.2, E = 6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f++ +sH+LR PL I+++ lL+++ + ++ +e+
CP000685_3 272 DLMHFASVVSHDLREPLRKIKFFNTLLRNDIE------ENVNEKS-- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+++ ++a+r++++i+ +L++s ++
CP000685_3 311 ----------KKYLHKVSQSAQRMENIIEGILTYSTLDKT 340

CP000685_1950: domain 1 of 1, from 258 to 323: score 46.6, E = 9.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+LR P+t+++g++e+ + e + +q+
CP000685_1 258 ELDRFVYSASHDLRSPITSLKGLIEITQL----------EDDIDQI- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ +++++ ++ i+d+ d+s+
CP000685_1 294 ----------KDYLKLMHQSLTKQDQFISDIIDYSKNKRK 323

CP000685_3336: domain 1 of 1, from 835 to 903: score 46.4, E = 1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ sH+L PL I+++a+ L e + d++ s++
CP000685_3 835 ELQSFAYISSHDLQEPLRKIQTFASRLAE------LDDQNISAKA-- 873

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yle+i+ +a+r++ Li+dlL++sr +
CP000685_3 874 ----------KTYLERIEVSAKRMQTLIQDLLTYSRTNSA 903

CP000685_3762: domain 1 of 1, from 589 to 654: score 45.7, E = 1.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ +sH+L PL I+ +a +L++ ++ + +
CP000685_3 589 ELAQFAYVASHDLQEPLRKIQIFAAMLQD---------GNSGRDP-- 624

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ +i +a r+++Li+dlL +sr+ ++
CP000685_3 625 ----------KTIIGKITASAARMSQLISDLLAFSRLIQP 654

CP000685_4262: domain 1 of 1, from 231 to 297: score 45.4, E = 2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f+ ++sHE++TPLtaI+g++e+ ++s+ +
CP000685_4 231 IQKNFINYVSHEFKTPLTAISGNLEVFAQ---------KDRSSAE-- 266

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+e+ e++l+ + ++++ n l+ ls ++++
CP000685_4 267 ---------YKEMSEKVLENVYQIEDTMNTLMMLSGLREN 297

CP000685_1615: domain 1 of 1, from 200 to 266: score 44.7, E = 3.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+f++n+sHEL TP++ ++ +e Ll + + l++
CP000685_1 200 KEKQFISNVSHELLTPIALLKNKLENLLQN--------DSLDDNA-- 236

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + l+ ++ l ++in+lL +srie++
CP000685_1 237 ----------VDKIAGSLKTLDMLKKIINNLLLISRIENN 266

CP000685_3032: domain 1 of 1, from 217 to 282: score 41.7, E = 2.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ n++HEL TPL+ + +++L l+ +q
CP000685_3 217 SQREFVENAAHELQTPLALFQNKIDTLFQ---------MRLDKDQ-- 252

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l + r++ l+rL +lL ls+ie++
CP000685_3 253 ----------TRVLGALSRDVAKLNRLNKNLLLLSKIEHE 282

CP000685_3375: domain 1 of 1, from 230 to 296: score 41.4, E = 2.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f+ n+sHEL+TP+t+I++ ae++l e+ +
CP000685_3 230 IQANFINNASHELKTPITTIIAEAEIMLL---------KEREVAE-- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y e l+ i+ +a rl +L + lL l++ +
CP000685_3 266 ---------YIESLQNIYGQASRLGNLTESLLKLTQTGYD 296

CP000685_3796: domain 1 of 1, from 276 to 344: score 39.4, E = 9.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f +sH+L+ P+ +++++ +L+e +l+ ++++
CP000685_3 276 DLKQFGHVISHDLKEPVRKLLLFSNILKE----------DLDNDKKP 312

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +y ++i ++a rl ++i+ +L +s ++++
CP000685_3 313 RM--------SQYAHKINKSAARLTEMIDSILNYSSAGSP 344

CP000685_3331: domain 1 of 1, from 172 to 239: score 38.2, E = 2.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L+ P+ I+ ++++++e + + +++ +
CP000685_3 172 ELQQFAWVVSHDLNEPIRKIQIFIKIIKELY-------LKEDDKGI- 210

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y+++ +++aer++ Li dlL +sr+ a+
CP000685_3 211 -----------DYVNRTIKSAERMQTLITDLLAYSRLSAQ 239

CP000685_4481: domain 1 of 1, from 233 to 301: score 37.9, E = 2.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+ HEL+TPL+++ +++L+ ++ ++
CP000685_4 233 VKTDFINNITHELKTPLATLGISTKILEQ--------KNIRDNDES- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ti r+ +rl++Li++++ s +e++
CP000685_4 271 ---------FNSIVNTISRQNNRLQSLIDQVMANSLAENE 301

CP000685_0933: domain 1 of 1, from 254 to 325: score 37.1, E = 4.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++ ++HE+++PLt +r++++ ++++ ++ +++ ++
CP000685_0 254 AWREMAKQVAHEIKNPLTPMRLTVQSFQRKF-------DPNDPDVKQ 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +y et++++++ + + + + ++ + a+
CP000685_0 294 KM--------NDYSETLIQQIDTMTSVASAFSNFASMPAQ 325

CP000685_2305: domain 1 of 1, from 362 to 430: score 36.8, E = 5.3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f +sH+L PL I+++++ + a + +s
CP000685_2 362 ELASFNHVASHDLQEPLRKIQTFISRVSD------ADKAVMSQSA-- 400

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y+++i+ +a+r++ Li+dlL +sr +
CP000685_2 401 ----------RDYISKIEVSAKRMRVLIDDLLLFSRTNTT 430

CP000685_3891: domain 1 of 1, from 235 to 296: score 36.6, E = 5.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ fl n+sHEL+TPLt I+g +++ l ++++ eq
CP000685_3 235 IQKNFLKNASHELKTPLTIIIGDIDVSLQ---------QPRTNEQ-- 270

peLRledpeyreyletilreaerllrLindlLdls<-*
y+e l+++++++ +l ++++ lL ls
CP000685_3 271 ---------YEEVLKSLRKDTFHLKSILDGLLILS 296

CP000685_3983: domain 1 of 1, from 193 to 258: score 31.2, E = 2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ef+ +sH+L+ PL I ++ + + + lse +
CP000685_3 193 NLEEFIHVISHDLKEPLRKIVMHNDRIDG---------SYLSETD-- 228

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++++++a rl++L++dl ++s a+
CP000685_3 229 ----------AKSMNVLKSSALRLNSLVDDLVQYSSHTAQ 258

CP000685_4803: domain 1 of 1, from 1106 to 1174: score 29.7, E = 5.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ sH+L PL I+++a+ + e + ++ls+
CP000685_4 1106 ELQSFAYISSHDLQEPLRKIQTFASQIIE------KEFENLSDSG-- 1144

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++++++a+r++ Li dlL +sr +
CP000685_4 1145 ----------KDKFQRMQNAAKRMQTLIHDLLSYSRTNIQ 1174

CP000685_4442: domain 1 of 1, from 272 to 340: score 27.9, E = 1.7e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f+ ++ H+L+ P+ I+++ lL++ e +e +
CP000685_4 272 NLIHFANMVTHDLKEPVRKIKTFNGLLKK----------EIESERI- 307

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++y ++++++a+r++ Li+ L +s +
CP000685_4 308 -------ENIKKYSDKVDQSAQRMQTLIEGTLAYSTLNKS 340


Histogram of all scores:
score obs exp (one = represents 18 sequences)
----- --- ---
-14 9 0|=
-13 64 3|*===
-12 252 114|======*=======
-11 609 594|================================*=
-10 921 1103|==================================================== *
-9 1026 1139|========================================================= *
-8 817 853|============================================== *
-7 528 537|=============================*
-6 355 309|=================*==
-5 170 169|=========*
-4 89 90|====*
-3 49 47|==*
-2 35 25|=*
-1 18 13|*
0 15 6|*
1 6 3|*
2 5 1|*
3 1 0|=
4 1 0|=
5 1 0|=
6 0 0|
> 7 46 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 229.9496
P(chi-square) = 3.865e-312

Total sequences searched: 5017

Whole sequence top hits:
tophits_s report:
Total hits: 37
Satisfying E cutoff: 37
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 37
Satisfying E cutoff: 37
Total memory: 35K


Acknowledgements:

This research is funded by:

Developed by: