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Classification of phyla is from NCBI page
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2 accessions found for Phenylobacterium zucineum HLK1  

Data for CP000747  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000747.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000747_2676 CDS_3073994-3075859 97.8 1.9e-27 1
CP000747_3235 CDS_3672402-3674066 94.6 1.5e-26 1
CP000747_1163 CDS_1335366-1337774 93.7 2.8e-26 1
CP000747_2707 CDS_3108899-3107238 90.8 1.9e-25 1
CP000747_2708 CDS_3109065-3109838 89.2 5.2e-25 1
CP000747_3179 CDS_3613033-3614802 85.1 7.6e-24 1
CP000747_1033 CDS_1151940-1154441 85.0 8.1e-24 1
CP000747_2076 CDS_2332879-2327021 84.9 8.8e-24 1
CP000747_3271 CDS_3718449-3720380 84.6 1.1e-23 1
CP000747_0290 CDS_285847-283481 84.4 1.2e-23 1
CP000747_0557 CDS_590228-588378 84.1 1.5e-23 1
CP000747_3479 CDS_3937089-3938633 82.8 3.5e-23 1
CP000747_2714 CDS_3116052-3114286 81.2 9.8e-23 1
CP000747_0666 CDS_719357-717741 81.0 1.1e-22 1
CP000747_0502 CDS_527082-528515 79.7 2.7e-22 1
CP000747_0126 CDS_118792-120552 79.6 2.9e-22 1
CP000747_1825 CDS_2047070-2045577 78.8 4.7e-22 1
CP000747_2642 CDS_3034554-3036011 69.1 2.7e-19 1
CP000747_0218 CDS_222695-220380 62.8 1.6e-17 1
CP000747_0084 CDS_80169-81761 60.7 6.2e-17 1
CP000747_2848 CDS_3267199-3268563 53.8 5.6e-15 1
CP000747_2601 CDS_2994991-2996979 52.2 1.7e-14 1
CP000747_2816 CDS_3233843-3237190 50.4 5.1e-14 1
CP000747_1726 CDS_1937854-1935680 46.6 6.2e-13 1
CP000747_1728 CDS_1940508-1939390 46.6 6.2e-13 1
CP000747_0697 CDS_762328-764223 46.4 7.3e-13 1
CP000747_2075 CDS_2327019-2324935 44.3 2.8e-12 1
CP000747_2654 CDS_3049387-3051774 43.4 5.3e-12 1
CP000747_2257 CDS_2564402-2562162 41.9 1.3e-11 1
CP000747_2798 CDS_3215203-3216699 38.4 1.4e-10 1
CP000747_2255 CDS_2561724-2559280 37.3 2.7e-10 1
CP000747_0227 CDS_229712-228342 37.1 3e-10 1
CP000747_0933 CDS_1023921-1026026 37.0 3.4e-10 1
CP000747_1901 CDS_2130666-2132003 35.4 9.3e-10 1
CP000747_1036 CDS_1157584-1159398 32.1 7.9e-09 1
CP000747_0443 CDS_447986-449476 27.8 1.3e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000747_2676 1/1 375 444 .. 1 87 [] 97.8 1.9e-27
CP000747_3235 1/1 181 246 .. 1 87 [] 94.6 1.5e-26
CP000747_1163 1/1 424 489 .. 1 87 [] 93.7 2.8e-26
CP000747_2707 1/1 313 381 .. 1 87 [] 90.8 1.9e-25
CP000747_2708 1/1 31 100 .. 1 87 [] 89.2 5.2e-25
CP000747_3179 1/1 214 279 .. 1 87 [] 85.1 7.6e-24
CP000747_1033 1/1 456 521 .. 1 87 [] 85.0 8.1e-24
CP000747_2076 1/1 1265 1333 .. 1 87 [] 84.9 8.8e-24
CP000747_3271 1/1 254 319 .. 1 87 [] 84.6 1.1e-23
CP000747_0290 1/1 411 476 .. 1 87 [] 84.4 1.2e-23
CP000747_0557 1/1 238 303 .. 1 87 [] 84.1 1.5e-23
CP000747_3479 1/1 18 83 .. 1 87 [] 82.8 3.5e-23
CP000747_2714 1/1 201 266 .. 1 87 [] 81.2 9.8e-23
CP000747_0666 1/1 160 225 .. 1 87 [] 81.0 1.1e-22
CP000747_0502 1/1 208 275 .. 1 87 [] 79.7 2.7e-22
CP000747_0126 1/1 208 273 .. 1 87 [] 79.6 2.9e-22
CP000747_1825 1/1 281 349 .. 1 87 [] 78.8 4.7e-22
CP000747_2642 1/1 263 331 .. 1 87 [] 69.1 2.7e-19
CP000747_0218 1/1 541 608 .. 1 87 [] 62.8 1.6e-17
CP000747_0084 1/1 300 365 .. 1 87 [] 60.7 6.2e-17
CP000747_2848 1/1 250 308 .. 1 87 [] 53.8 5.6e-15
CP000747_2601 1/1 293 359 .. 1 87 [] 52.2 1.7e-14
CP000747_2816 1/1 760 827 .. 1 87 [] 50.4 5.1e-14
CP000747_1726 1/1 484 556 .. 1 87 [] 46.6 6.2e-13
CP000747_1728 1/1 138 202 .. 1 87 [] 46.6 6.2e-13
CP000747_0697 1/1 258 325 .. 1 87 [] 46.4 7.3e-13
CP000747_2075 1/1 322 388 .. 1 87 [] 44.3 2.8e-12
CP000747_2654 1/1 406 472 .. 1 87 [] 43.4 5.3e-12
CP000747_2257 1/1 514 582 .. 1 87 [] 41.9 1.3e-11
CP000747_2798 1/1 269 339 .. 1 87 [] 38.4 1.4e-10
CP000747_2255 1/1 435 504 .. 1 87 [] 37.3 2.7e-10
CP000747_0227 1/1 231 287 .. 1 78 [. 37.1 3e-10
CP000747_0933 1/1 322 388 .. 1 87 [] 37.0 3.4e-10
CP000747_1901 1/1 242 299 .. 1 87 [] 35.4 9.3e-10
CP000747_1036 1/1 215 281 .. 1 87 [] 32.1 7.9e-09
CP000747_0443 1/1 265 329 .. 1 87 [] 27.8 1.3e-07

Alignments of top-scoring domains:
CP000747_2676: domain 1 of 1, from 375 to 444: score 97.8, E = 1.9e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL+aI g++e++ +e++ ++l++
CP000747_2 375 AKSEFLANMSHELRTPLNAINGFSEIMVAEMY------GPLGDAR-- 413

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr+y + il+++++ll+Lind+Ld+s+ieag
CP000747_2 414 ---------YRDYARDILNSGQHLLALINDILDMSKIEAG 444

CP000747_3235: domain 1 of 1, from 181 to 246: score 94.6, E = 1.5e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTPL++++g+a+++ + ++l++ q
CP000747_3 181 AKSAFLAAMSHEIRTPLNGVLGMAQAMAM---------EDLPPHQ-- 216

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re le+i++++e+ll+++ndlLdls+ieag
CP000747_3 217 ----------RERLEVIRQSGESLLAILNDLLDLSKIEAG 246

CP000747_1163: domain 1 of 1, from 424 to 489: score 93.7, E = 2.8e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTPL++++g+a+++ + +els+ q
CP000747_1 424 AKSAFLATMSHEIRTPLNGVLGMAQAMAM---------DELSPAQ-- 459

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l++i++++e+ll+++nd+Ldls+ieag
CP000747_1 460 ----------RERLDVIRQSGESLLAILNDVLDLSKIEAG 489

CP000747_2707: domain 1 of 1, from 313 to 381: score 90.8, E = 1.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHELRTPL+aI+g++++++ +l+ +++++
CP000747_2 313 GKSRFLANMSHELRTPLNAIMGFSDIMRQRLF------GPMGDRY-- 351

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey e i++++ +ll+Lind+Ld+s+iea+
CP000747_2 352 ----------GEYAELIHESGSHLLELINDVLDMSKIEAE 381

CP000747_2708: domain 1 of 1, from 31 to 100: score 89.2, E = 5.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ fl+++sHELRTPL++I+g++e+L el+ ++l+++q
CP000747_2 31 QKRSFLRMVSHELRTPLNSILGFSEILTSELY------GPLGAPQ-- 69

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ey +i+++++ ll+L+n++L+++r+e++
CP000747_2 70 ---------YKEYAGIIRESGQKLLKLVNQVLEIARLENQ 100

CP000747_3179: domain 1 of 1, from 214 to 279: score 85.1, E = 7.6e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fl+++ HELRTP+++++g+a +L+ t+ls+ q
CP000747_3 214 AKSAFLSMVTHELRTPMNGVMGMARALQQ---------TDLSPRQ-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey +ti r+++ ll+++nd+Ld s+ieag
CP000747_3 250 ----------REYADTIVRSGDGLLAILNDVLDHSKIEAG 279

CP000747_1033: domain 1 of 1, from 456 to 521: score 85.0, E = 8.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHE+RTPLt+I+g+a+ L e +l+e+
CP000747_1 456 VKSDFLANMSHEIRTPLTSILGFASFLDE---------LKLPEPA-- 491

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y ++ +++ ll+++nd+Ld+s++eag
CP000747_1 492 ----------GGYAAKVTTASRTLLAIVNDVLDFSKLEAG 521

CP000747_2076: domain 1 of 1, from 1265 to 1333: score 84.9, E = 8.8e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ +++lL +++ ++ls++q
CP000747_2 1265 YKSEFLANMSHELRTPLNSLLILSKLLADNAQ------GNLSDKQ-- 1303

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + i++++ ll Lind+Ldls+ie+g
CP000747_2 1304 ----------VEFARNIHDAGADLLGLINDILDLSKIESG 1333

CP000747_3271: domain 1 of 1, from 254 to 319: score 84.6, E = 1.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++flan+sHE+RTPL++++++ae++ +el + q
CP000747_3 254 LKTQFLANMSHEIRTPLNGVLAMAEVMAL---------GELAPLQ-- 289

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l++i+r++ ll+ +nd+Ldls+ieag
CP000747_3 290 ----------RERLDVIRRSGGLLLAVLNDVLDLSKIEAG 319

CP000747_0290: domain 1 of 1, from 411 to 476: score 84.4, E = 1.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ flan+sHE+RTPL++++g +++L+ + l++e
CP000747_0 411 AKGAFLANMSHEIRTPLNGVMGVLHILKS---------EQLTDEG-- 446

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+ +l++++ l +L+nd+ d+s+ieag
CP000747_0 447 ----------RSLLDEALSCGQMLAELLNDVIDFSKIEAG 476

CP000747_0557: domain 1 of 1, from 238 to 303: score 84.1, E = 1.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP+++++g+a+lL++ +e++++q+
CP000747_0 238 AKSNFLATMSHEIRTPMNGVLGMAQLLKR---------DEADPQQI- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+t+++++e+ll+++nd+Ld s+i+ag
CP000747_0 275 -----------ARLDTLIDSGEYLLSILNDILDVSKIDAG 303

CP000747_3479: domain 1 of 1, from 18 to 83: score 82.8, E = 3.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
e la+lsHE+RTPL++++g+a lL+ t l++eq
CP000747_3 18 ISAEQLASLSHEFRTPLNGVLGMARLLEG---------TRLTAEQ-- 53

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+ +++++++ll L+nd+Ld+++++ag
CP000747_3 54 ----------RSYVAALRESGQHLLTLVNDVLDFAKLGAG 83

CP000747_2714: domain 1 of 1, from 201 to 266: score 81.2, E = 9.8e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTPL++++g+++++++ + l+ q
CP000747_2 201 AKSAFLATMSHEIRTPLNGVLGMVQVMER---------GRLGVRQ-- 236

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l +i+++a l + +nd+Ld+s+ie g
CP000747_2 237 ----------RQHLAVIRESAGALMKVLNDVLDISKIEVG 266

CP000747_0666: domain 1 of 1, from 160 to 225: score 81.0, E = 1.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +fla +sHE+RTPL++++g ae+L++ +l++ ++
CP000747_0 160 AKARFLAVMSHEIRTPLNGVLGVAEILRR----------KLPDAEL- 195

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ti++++ llrL+nd Ldlsr+ea
CP000747_0 196 ----------APLVNTIIESGGVLLRLLNDALDLSRAEAA 225

CP000747_0502: domain 1 of 1, from 208 to 275: score 79.7, E = 2.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +flan+sHELRTPL++++g++e+L+ + + q
CP000747_0 208 TRADFLANASHELRTPLASLSGFIETLRG-------HARSDPGAQ-- 245

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +++ +aer++rLi+dl+ lsrie +
CP000747_0 246 ----------ERFLTIMQAQAERMRRLIDDLMSLSRIELN 275

CP000747_0126: domain 1 of 1, from 208 to 273: score 79.6, E = 2.9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHE+RTPL++++g+a+++ ++l+ q
CP000747_0 208 AKSEFLATMSHEIRTPLNGVLGMAQAMAH---------DPLPRRQ-- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re le+i++++e ll L+ndlLd+s+iea
CP000747_0 244 ----------RERLEVIRQSGEVLLVLLNDLLDISKIEAA 273

CP000747_1825: domain 1 of 1, from 281 to 349: score 78.8, E = 4.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHE++TPL++I g++elL++ + +++s+ +r
CP000747_1 281 YLRDFAAAVSHEFKTPLAGIGGAVELLQD-------HFETMSPAER- 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+ i +a rl++L+ +lLdl+r++
CP000747_1 320 ----------RRFLDNIAADAGRLSQLVTRLLDLARADMA 349

CP000747_2642: domain 1 of 1, from 263 to 331: score 69.1, E = 2.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +l+++sH+LRTPL+aI++ a L+e++ + ++ r
CP000747_2 263 LRNALLSSISHDLRTPLAAILASATSLREFG-------DSFDPGVR- 301

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ ti++e+erl++ + +lL ++r++ag
CP000747_2 302 ----------RDLAATIQEETERLDAVVANLLSMTRLQAG 331

CP000747_0218: domain 1 of 1, from 541 to 608: score 62.8, E = 1.6e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+s ELRTPLt+I+gy+elL+ + ++l+e
CP000747_0 541 LKRDFVGNVSYELRTPLTTIIGYSELLEHSG-------DALPERA-- 578

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++++a +l r i+d+Ld+++i+a
CP000747_0 579 ----------RAHAASVKSAATQLARSIDDVLDMAQIDAD 608

CP000747_0084: domain 1 of 1, from 300 to 365: score 60.7, E = 6.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a+++HE+R+PLt+Ir ++e+L + ++
CP000747_0 300 AIEAFAADVAHEIRNPLTSIRSAVETLDL---------VKEPASR-- 335

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +++++++rl+rL+ d+ sr++a+
CP000747_0 336 ----------ERLMGVVKNDVQRLDRLVTDISNASRLDAE 365

CP000747_2848: domain 1 of 1, from 250 to 308: score 53.8, E = 5.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +++++ l++
CP000747_2 250 QRTTLLASVSHDLRTPLTRLKLALALAEP------------------ 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++r++ ++++i++ L ++r e g
CP000747_2 279 ----------TRATADMKRDLAEMEHMIDEYLAFARGEGG 308

CP000747_2601: domain 1 of 1, from 293 to 359: score 52.2, E = 1.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+++g+++l+++ +++++ r
CP000747_2 293 AVGQLTGGVAHDFNNLLTVVIGALDLMQR---------HPADAARR- 329

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++e +l +a+r +rL ++lL +sr +a
CP000747_2 330 ----------ERMIEAALGAARRGERLTQQLLAFSRRQAL 359

CP000747_2816: domain 1 of 1, from 760 to 827: score 50.4, E = 5.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+fla++sH+L +PL+a r+++ +L eel + +++
CP000747_2 760 SKSRFLAAASHDLLQPLHAARLFVAALGEEL-------KDGDPDS-- 797

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + + ++ ++ +rL++ lL ls++eag
CP000747_2 798 ----------RALARDADLAIATADRLLRALLNLSKLEAG 827

CP000747_1726: domain 1 of 1, from 484 to 556: score 46.6, E = 6.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ ++ ++HE+++PLt I++ ae L++++ + + + ++
CP000747_1 484 AWRDVARRIAHEIKNPLTPIQLSAERLRKKY------RKDIADAELE 524

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++ti r++ + r+++++ ++r+ a+
CP000747_1 525 TF--------DRCTDTIVRQVGDIGRMVDEFSAFARMPAP 556

CP000747_1728: domain 1 of 1, from 138 to 202: score 46.6, E = 6.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + ++l+HE+++PL++Irg+a+lL++ +++ e+
CP000747_1 138 SLVGLGRMLAHEIKNPLAGIRGAAQLLKA---------GAKAEDA-- 173

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i +e++r +rL++++ +s +
CP000747_1 174 -----------PLAQLIVDETDRVRRLVDRMEAFSDDALP 202

CP000747_0697: domain 1 of 1, from 258 to 325: score 46.4, E = 7.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++ +++H++++ LtaI g +el+ + + ++++e++
CP000747_0 258 ALGTLAGGVAHDFNNLLTAIVGSLELASK--------RLDRDPETV- 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+ + +a+r +L ++lL +sr
CP000747_0 296 ----------RRYLDNAALAAQRGASLTQRLLGFSRRTDS 325

CP000747_2075: domain 1 of 1, from 322 to 388: score 44.3, E = 2.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+++g++++L + ++ +e r+
CP000747_2 322 AVGQLTGGVAHDFNNLLTVVLGNIDMLAR----------KQEDEARR 358

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ i+++aer ++L ++lL +sr ++
CP000747_2 359 ----------ARRIDAIRQAAERGRDLTRQLLAFSRRQHL 388

CP000747_2654: domain 1 of 1, from 406 to 472: score 43.4, E = 5.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++H++++ L +++g a++L++ +++ +
CP000747_2 406 ALGKLTGGVAHDFNNLLMVVSGQAQMLRN---------RVGDDPRA- 442

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ i+ +a+r ++L + lL +sr +
CP000747_2 443 ----------LRALDAIETSAKRGEDLTRHLLAFSRRQRL 472

CP000747_2257: domain 1 of 1, from 514 to 582: score 41.9, E = 1.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR P + g+aelL ++ +++ + ++
CP000747_2 514 ELESFSYSISHDLRAPFRHVVGFAELLSDRI-------GDQLDATA- 552

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl++i ++a + rL++dlL +s+++
CP000747_2 553 ----------RHYLQSITEAALSAGRLVDDLLNFSQLGRS 582

CP000747_2798: domain 1 of 1, from 269 to 339: score 38.4, E = 1.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PL+a y++ + l+ ++l+ +++
CP000747_2 269 ALGEMASALAHELNQPLSAAANYVKGSVR-----LLDQEPLDKPKI- 309

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ + +++ r ++i++l+d+ ++
CP000747_2 310 ----------KDALNLAGEQTLRAGQIIRRLRDFVAKGEA 339

CP000747_2255: domain 1 of 1, from 435 to 504: score 37.3, E = 2.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++++++H++++ Lt+I+g++ +++ +++++ l+
CP000747_2 435 AVGQLTSGVAHDFNNLLTVILGNIRFIER-----TLQREGLDGGV-- 474

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l ++++aer +L ++L +sr +
CP000747_2 475 ----------VDRLGHMRNAAERGAKLTGQMLAFSRRQKL 504

CP000747_0227: domain 1 of 1, from 231 to 287: score 37.1, E = 3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++a+++HEL TPL++I+ a+ + + e++ +q+
CP000747_0 231 ALGTLAAAAAHELGTPLATISIVAKEMAR----------EAPTPQV- 266

peLRledpeyreyletilreaerllrLindl<-*
+e + + +aer+++++++l
CP000747_0 267 ----------KEDADLLMAQAERCREILRRL 287

CP000747_0933: domain 1 of 1, from 322 to 388: score 37.0, E = 3.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ LtaI++ +++L + +++ +++
CP000747_0 322 AIGQLAGGVAHDFNNLLTAILMQLDVLAT--------RHPVGDPS-- 358

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ i++ + r +L++ lL +sr ++
CP000747_0 359 ----------YEGLNEIKQTSMRAADLVRKLLAFSRKQTV 388

CP000747_1901: domain 1 of 1, from 242 to 299: score 35.4, E = 9.3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++a+++H+LRTPLt +r+ +e+L e
CP000747_1 242 DRTAMVAAIAHDLRTPLTRLRFRIEALPE------------------ 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e + +++++++++i L + r +
CP000747_1 271 -----------EQRAKFSSDLDQMEEMITATLAFVRDTSR 299

CP000747_1036: domain 1 of 1, from 215 to 281: score 32.1, E = 7.9e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++H++++ L +++g+ el+ + +++ +++
CP000747_1 215 ALGQLTGGIAHDFNNLLQVVQGAFELISR--------RADDPAKV-- 251

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y l+++er +L +lL +sr++
CP000747_1 252 ----------KAYAAHGLHATERGASLAKQLLAFSRAQKL 281

CP000747_0443: domain 1 of 1, from 265 to 329: score 27.8, E = 1.3e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e +a + H+L++ Lt+ + ++e L + l ++++
CP000747_0 265 ALGEAVAKINHDLKNMLTSAQIASERLAA-----------LQDPKV- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +++r+++r +L +d+L + + ++
CP000747_0 300 ----------SQALPRLERALDRAVKLASDVLAYGKTQEA 329


Histogram of all scores:
score obs exp (one = represents 13 sequences)
----- --- ---
-14 3 0|=
-13 19 2|*=
-12 109 80|======*==
-11 284 418|====================== *
-10 554 776|=========================================== *
-9 741 801|========================================================= *
-8 630 600|==============================================*==
-7 479 378|=============================*=======
-6 291 217|================*======
-5 189 119|=========*=====
-4 80 63|====*==
-3 54 33|==*==
-2 28 17|=*=
-1 12 9|*
0 6 4|*
1 5 2|*
2 3 1|*
3 0 0|
4 0 0|
5 1 0|=
6 0 0|
> 7 41 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 237.9222
P(chi-square) = 1.857e-314

Total sequences searched: 3529

Whole sequence top hits:
tophits_s report:
Total hits: 36
Satisfying E cutoff: 36
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 36
Satisfying E cutoff: 36
Total memory: 35K


Acknowledgements:

This research is funded by:

Developed by: