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Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Marinomonas sp. MWYL1  

Data for CP000749  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000749.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000749_0352 CDS_416949-413017 97.8 2.5e-27 1
CP000749_2001 CDS_2290180-2293956 97.0 4.1e-27 1
CP000749_1236 CDS_1401793-1398983 94.5 2.1e-26 1
CP000749_1627 CDS_1849733-1852102 93.2 4.9e-26 1
CP000749_0593 CDS_660508-663681 92.5 7.9e-26 1
CP000749_2996 CDS_3425717-3421437 92.0 1.1e-25 1
CP000749_0135 CDS_159773-157035 85.5 7.5e-24 1
CP000749_1167 CDS_1316735-1318540 85.4 8.3e-24 1
CP000749_0201 CDS_234069-236414 84.9 1.1e-23 1
CP000749_1075 CDS_1216723-1213358 82.4 5.7e-23 1
CP000749_3341 CDS_3829842-3827134 82.3 6.1e-23 1
CP000749_2362 CDS_2695285-2692883 80.2 2.4e-22 1
CP000749_4353 CDS_5000311-5001654 77.7 1.2e-21 1
CP000749_0949 CDS_1056356-1059820 72.3 4e-20 1
CP000749_4370 CDS_5019656-5021491 67.7 8.5e-19 1
CP000749_4430 CDS_5090505-5091575 64.1 8.6e-18 1
CP000749_2594 CDS_2969056-2967749 62.4 2.7e-17 1
CP000749_1410 CDS_1596806-1593348 58.9 2.5e-16 1
CP000749_3351 CDS_3840301-3838844 58.8 2.8e-16 1
CP000749_0726 CDS_797227-796070 57.8 5.2e-16 1
CP000749_2840 CDS_3251972-3253378 54.6 4.4e-15 1
CP000749_2306 CDS_2624232-2622829 51.5 3.3e-14 1
CP000749_4143 CDS_4752017-4749489 50.0 8.5e-14 1
CP000749_2756 CDS_3156298-3157788 46.4 9.1e-13 1
CP000749_3411 CDS_3896354-3895200 46.2 1e-12 1
CP000749_0222 CDS_261153-259816 45.7 1.4e-12 1
CP000749_1548 CDS_1745508-1746896 43.5 6.1e-12 1
CP000749_1001 CDS_1128834-1127761 43.2 7.4e-12 1
CP000749_2630 CDS_3005438-3004173 41.4 2.4e-11 1
CP000749_4115 CDS_4721961-4720531 41.4 2.4e-11 1
CP000749_1784 CDS_2031724-2033187 40.8 3.6e-11 1
CP000749_0413 CDS_478861-477443 37.2 3.7e-10 1
CP000749_0902 CDS_1003932-1006247 34.2 2.6e-09 1
CP000749_4300 CDS_4936888-4938354 33.8 3.4e-09 1
CP000749_0667 CDS_731620-732822 33.7 3.7e-09 1
CP000749_0299 CDS_360303-358927 31.0 2e-08 1
CP000749_0474 CDS_539718-537748 30.1 3.8e-08 1
CP000749_4362 CDS_5010037-5011878 30.1 3.9e-08 2
CP000749_2843 CDS_3255122-3257203 27.9 1.6e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000749_0352 1/1 550 615 .. 1 87 [] 97.8 2.5e-27
CP000749_2001 1/1 601 666 .. 1 87 [] 97.0 4.1e-27
CP000749_1236 1/1 297 362 .. 1 87 [] 94.5 2.1e-26
CP000749_1627 1/1 189 254 .. 1 87 [] 93.2 4.9e-26
CP000749_0593 1/1 554 619 .. 1 87 [] 92.5 7.9e-26
CP000749_2996 1/1 769 834 .. 1 87 [] 92.0 1.1e-25
CP000749_0135 1/1 188 254 .. 1 87 [] 85.5 7.5e-24
CP000749_1167 1/1 222 287 .. 1 87 [] 85.4 8.3e-24
CP000749_0201 1/1 286 351 .. 1 87 [] 84.9 1.1e-23
CP000749_1075 1/1 539 604 .. 1 87 [] 82.4 5.7e-23
CP000749_3341 1/1 439 505 .. 1 87 [] 82.3 6.1e-23
CP000749_2362 1/1 240 305 .. 1 87 [] 80.2 2.4e-22
CP000749_4353 1/1 203 270 .. 1 87 [] 77.7 1.2e-21
CP000749_0949 1/1 688 754 .. 1 87 [] 72.3 4e-20
CP000749_4370 1/1 391 456 .. 1 87 [] 67.7 8.5e-19
CP000749_4430 1/1 120 188 .. 1 87 [] 64.1 8.6e-18
CP000749_2594 1/1 216 281 .. 1 87 [] 62.4 2.7e-17
CP000749_1410 1/1 791 856 .. 1 87 [] 58.9 2.5e-16
CP000749_3351 1/1 262 326 .. 1 87 [] 58.8 2.8e-16
CP000749_0726 1/1 152 209 .. 1 79 [. 57.8 5.2e-16
CP000749_2840 1/1 246 310 .. 1 87 [] 54.6 4.4e-15
CP000749_2306 1/1 247 312 .. 1 87 [] 51.5 3.3e-14
CP000749_4143 1/1 473 539 .. 1 87 [] 50.0 8.5e-14
CP000749_2756 1/1 272 340 .. 1 87 [] 46.4 9.1e-13
CP000749_3411 1/1 167 233 .. 1 87 [] 46.2 1e-12
CP000749_0222 1/1 226 291 .. 1 87 [] 45.7 1.4e-12
CP000749_1548 1/1 244 306 .. 1 87 [] 43.5 6.1e-12
CP000749_1001 1/1 134 198 .. 1 87 [] 43.2 7.4e-12
CP000749_2630 1/1 222 287 .. 1 87 [] 41.4 2.4e-11
CP000749_4115 1/1 247 312 .. 1 87 [] 41.4 2.4e-11
CP000749_1784 1/1 258 315 .. 1 79 [. 40.8 3.6e-11
CP000749_0413 1/1 244 310 .. 1 87 [] 37.2 3.7e-10
CP000749_0902 1/1 530 598 .. 1 87 [] 34.2 2.6e-09
CP000749_4300 1/1 283 341 .. 1 87 [] 33.8 3.4e-09
CP000749_0667 1/1 183 248 .. 1 87 [] 33.7 3.7e-09
CP000749_0299 1/1 238 302 .. 1 87 [] 31.0 2e-08
CP000749_0474 1/1 423 490 .. 1 87 [] 30.1 3.8e-08
CP000749_2843 1/1 476 544 .. 1 87 [] 27.9 1.6e-07

Alignments of top-scoring domains:
CP000749_0352: domain 1 of 1, from 550 to 615: score 97.8, E = 2.5e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP+++I+g+++l+l t+l+++q
CP000749_0 550 AKSEFLANMSHEIRTPMNSIIGMSSLALQ---------TPLNDKQ-- 585

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+e++ ++ae+ll++ind+Ld+s+iea
CP000749_0 586 ----------RGYIEKVSHSAESLLNIINDILDFSKIEAR 615

CP000749_2001: domain 1 of 1, from 601 to 666: score 97.0, E = 4.1e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL++++g+aelL t+l++eq
CP000749_2 601 AKSDFLATMSHEIRTPLNGVLGMAELLSG---------TKLNPEQ-- 636

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+++++++e ll LindlLd+s+ieag
CP000749_2 637 ----------TTQLNVLKESGEGLLGLINDLLDFSKIEAG 666

CP000749_1236: domain 1 of 1, from 297 to 362: score 94.5, E = 2.1e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHE RTPL+aI+gy+++L++ + ++ q+
CP000749_1 297 LKSQFLANISHEVRTPLNAILGYTKTLQK----------DITDTQQ- 332

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y++ti++++++ll +i d+Ld+s+ieag
CP000749_1 333 ----------RLYVDTIEQSTNSLLTIIGDILDFSKIEAG 362

CP000749_1627: domain 1 of 1, from 189 to 254: score 93.2, E = 4.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a +sHE+RTP++a++g+++l+l+ t l+ eq
CP000749_1 189 AKSSFVARMSHEIRTPINAVIGLSHLALK---------TSLNHEQ-- 224

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++til+++e ll+L+nd+Ld+s+ieag
CP000749_1 225 ----------QDYINTILSSGENLLSLVNDVLDFSKIEAG 254

CP000749_0593: domain 1 of 1, from 554 to 619: score 92.5, E = 7.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTPL++++g ++lL + t+l ++q
CP000749_0 554 AKSEFLANMSHEIRTPLNGVIGCLSLLMN---------TKLQPDQ-- 589

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ +++ae+ll++ind+Ldls+ie g
CP000749_0 590 ----------SNLAKISQQSAESLLDIINDILDLSKIEMG 619

CP000749_2996: domain 1 of 1, from 769 to 834: score 92.0, E = 1.1e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTP++aI+g+++l ++ t+l+ +q
CP000749_2 769 AKSNFLANMSHEIRTPMNAILGMLHLVKR---------TTLTHQQ-- 804

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y+++++ +a++ll+Lind+Ld+s+ +ag
CP000749_2 805 ----------NDYVSKAQISAKSLLSLINDILDFSKVDAG 834

CP000749_0135: domain 1 of 1, from 188 to 254: score 85.5, E = 7.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a +sHE+RTP++a++g+++l+l+ t + +++
CP000749_0 188 AKSSFVARMSHEIRTPINAVIGLSDLALN---------TSPNHKEQ- 224

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl++i+++++ ll+L+n++Ld+s+ieag
CP000749_0 225 ----------QDYLQKIRDSGDILLSLVNNVLDFSKIEAG 254

CP000749_1167: domain 1 of 1, from 222 to 287: score 85.4, E = 8.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +fla++ HE+RTP+++++g+a+lL + ++l+e+q
CP000749_1 222 AKADFLAAMTHEIRTPMNGVLGMAQLLAM---------GDLNEKQ-- 257

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +i ++++ l ++in++Ld+s+i a+
CP000749_1 258 ----------KQQVTVINNAGRTLMHIINNILDYSKINAE 287

CP000749_0201: domain 1 of 1, from 286 to 351: score 84.9, E = 1.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE++TPL++I+g++elL+ +++s++
CP000749_0 286 AKSQFLATMSHEIKTPLNGILGMVELLQS---------QPQSSQS-- 321

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+ i++++e ll+++n lLd++r+e+g
CP000749_0 322 ----------HEKLSAIYQSGEALLEILNGLLDYARLEEG 351

CP000749_1075: domain 1 of 1, from 539 to 604: score 82.4, E = 5.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k flan+sHE+RTP++aI+g++++Lle +e s e
CP000749_1 539 SKASFLANMSHEIRTPMNAIIGFSDILLE---------SEISGEN-- 574

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++i ++a++ll+L+nd+Ld +++e +
CP000749_1 575 ----------KKHLSIISKSARSLLHLLNDILDSAKLEKN 604

CP000749_3341: domain 1 of 1, from 439 to 505: score 82.3, E = 6.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTPL+aI+gya+l+ e d l+
CP000749_3 439 AKSHFLANMSHEIRTPLNAIIGYAQLISE--------DNQLTGVS-- 475

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + +i ++++rll Lind+Ld++rie+g
CP000749_3 476 ----------RTRFLSIASAGHRLLGLINDILDIARIESG 505

CP000749_2362: domain 1 of 1, from 240 to 305: score 80.2, E = 2.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksefla++sHE+RTP++aI g++ lLl+ ++l+ ++
CP000749_2 240 VKSEFLATMSHEIRTPMNAIVGFSYLLLD---------GDLDKDH-- 275

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re + +i+++a+ ll ++n +Ld+s+ie+g
CP000749_2 276 ----------REKVLKIQQSADALLLIVNSVLDYSKIESG 305

CP000749_4353: domain 1 of 1, from 203 to 270: score 77.7, E = 1.2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHEL+TPLt+I+gy+e+L + + ++ +
CP000749_4 203 MRKDFVANASHELKTPLTVIKGYLETLDM--------FKDSLPKSM- 240

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + + +++er+++Li+dlL lsr+e++
CP000749_4 241 ----------QKGIVNMSEQSERMEQLIEDLLLLSRLESN 270

CP000749_0949: domain 1 of 1, from 688 to 754: score 72.3, E = 4e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ l ++sHELRTPL +I+gya+lL e ++ ++ +
CP000749_0 688 AKSRYLTGISHELRTPLQSIIGYAQLLSE--------KANTPSGH-- 724

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+r++ +l +Li+ lLd+s+ieag
CP000749_0 725 ----------QNGLDIIHRSGLYLADLIEGLLDISKIEAG 754

CP000749_4370: domain 1 of 1, from 391 to 456: score 67.7, E = 8.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+l+H++R+PLt Ir+++++L + e ++++
CP000749_4 391 SLGQLAAGLAHDIRNPLTIIRMTIQTLIK---------RESNPQH-- 426

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l +++e+er +r i++lL ++r ++
CP000749_4 427 ----------NEMLVMVEEEIERVNRVIENLLNFARPTQP 456

CP000749_4430: domain 1 of 1, from 120 to 188: score 64.1, E = 8.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ l ++sH+LRTPL++I+g++++L+e++ ++lse+++
CP000749_4 120 LRNSILLSVSHDLRTPLATIIGTLSTLKEYM-------AKLSEQEK- 158

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+++ e++rl + i++lL+ +++ +g
CP000749_4 159 ----------QELLDSATIESHRLHQYIENLLQATKLHHG 188

CP000749_2594: domain 1 of 1, from 216 to 281: score 62.4, E = 2.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+++++++sHELRTPL+ I ++ ++++++ ++e q
CP000749_2 216 SKERLMRDVSHELRTPLARIEVALTIAEDKY---------ATEAQ-- 251

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl++i+ e++ l++Li ++L+lsr+ea
CP000749_2 252 ----------KGYLNRIRTELHELDELIGQVLTLSRLEAA 281

CP000749_1410: domain 1 of 1, from 791 to 856: score 58.9, E = 2.5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+efla +sH++ +PL+a ++y +L+ tel++ +
CP000749_1 791 SKTEFLALASHDILQPLNAAKLYMGILQS---------TELPDNT-- 826

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +e++ +++e+ ++Li+ lL+++r+++g
CP000749_1 827 ----------NQVIEKLSDSLESTEALISTLLEIARLDQG 856

CP000749_3351: domain 1 of 1, from 262 to 326: score 58.8, E = 2.8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++ ++sHELRTP++ +r+ +e++++ e ++
CP000749_3 262 VQREMINAISHELRTPIARLRFGLEVMKD----------EVDDSV-- 296

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +e ++ ++e l+ L++++L++ ++eag
CP000749_3 297 ----------AKTIEALEGDVEELNTLVDEVLTYGKLEAG 326

CP000749_0726: domain 1 of 1, from 152 to 209: score 57.8, E = 5.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e++++l+HE+++PL +Irg+a+l+ + + ++e +
CP000749_0 152 SSKELVRGLAHEIKNPLGGIRGAAQLISR----------AFTDEAL- 187

peLRledpeyreyletilreaerllrLindlL<-*
+y+++i++e++rl++L+++lL
CP000749_0 188 ----------NDYTQVIIEESDRLRDLVDRLL 209

CP000749_2840: domain 1 of 1, from 246 to 310: score 54.6, E = 4.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ +++a+ +HELRTP++ +rg +e+++++ + s+e
CP000749_2 246 ARKRWVADTAHELRTPVAILRGEIEAMQDGI-------IKVSPES-- 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+++++e+ ++ rLi+dl +ls + g
CP000749_2 284 -------------LSSLHQETLHIARLIDDLNQLSMHDMG 310

CP000749_2306: domain 1 of 1, from 247 to 312: score 51.5, E = 3.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +++a+++HELRTPL+ +r +ae + +e + e
CP000749_2 247 REKRWIADAAHELRTPLSILRVHAENAAS---------AENDQER-- 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l + + ++r r++++lL l+r+e++
CP000749_2 283 ----------NQSLTQLTSGVDRSTRIVSQLLALARLEHQ 312

CP000749_4143: domain 1 of 1, from 473 to 539: score 50.0, E = 8.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++ +++H++++ L+aI+g++++L + + +++e+q
CP000749_4 473 MLGQLTGGVAHDFNNLLAAIMGNLQMLSDSF--------PQTEDQ-- 509

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+e++l +e ++L+++lL +sr ++
CP000749_4 510 ----------ARYIERALVVSEKSSNLVQRLLAFSRRQQL 539

CP000749_2756: domain 1 of 1, from 272 to 340: score 46.4, E = 9.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ef+ +sH+LR PL +I ++e +e+l +e + +++
CP000749_2 272 NLEEFTYVASHDLRSPLRGIADLLEWVKEDL-------GETPLPDV- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ le+i ++r+++Li++lL+++r++
CP000749_2 311 ----------TRNLERISVRIQRMEQLIDNLLTYARAGKV 340

CP000749_3411: domain 1 of 1, from 167 to 233: score 46.2, E = 1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a+l+H++RTPL++ +ya L++ ++l + r
CP000749_3 167 NMGKMVAALAHQIRTPLSSATLYAGHLQK---------PDLAPVMR- 203

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +++ + + ++++i+d+L +sr e
CP000749_3 204 ----------QTFANKLVDRLANIEKQIRDMLIFSRSEIK 233

CP000749_0222: domain 1 of 1, from 226 to 291: score 45.7, E = 1.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+an +HELRTPL+ ++ ++ ++ ++++e +
CP000749_0 226 AERSFTANSAHELRTPLAIALAKVQRIKS----------AATDEPL- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +++++++l+++ + lL+l+++e g
CP000749_0 262 ----------KTQITDVENSLKSLSKQSEKLLELAKAEGG 291

CP000749_1548: domain 1 of 1, from 244 to 306: score 43.5, E = 6.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l+++sHELR PLt +r++ l+++ +l++
CP000749_1 244 RQQRLLSDISHELRSPLTRLRMAQALAKR----------KLGD---- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +i+ ea+r++++i lL+ls +
CP000749_1 277 ----------STDLTRIDTEAQRIEQMIGKLLELSSVQVD 306

CP000749_1001: domain 1 of 1, from 134 to 198: score 43.2, E = 7.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ + a+++HELRTP+t + g ++ +l+ + s++
CP000749_1 134 EQRFWNAAIAHELRTPVTILYGRLQGMLD---------GIFSPDN-- 169

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+++l +++ l +L++dl+ s e+g
CP000749_1 170 -----------HQLRSLLVQVDGLKNLVEDLRVVSLEESG 198

CP000749_2630: domain 1 of 1, from 222 to 287: score 41.4, E = 2.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f +++sHELRTPL +++g++ lL + s e +
CP000749_2 222 RERAFNRYASHELRTPLMVMKGATTLLGK----------SDSKEFL- 257

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ ++ + +++ i lL l+r e
CP000749_2 258 ----------ERQRVRMVQACQEMEDYITTLLSLTRDEDL 287

CP000749_4115: domain 1 of 1, from 247 to 312: score 41.4, E = 2.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a ++H++RTPL+++ a+ +l+ e +e r
CP000749_4 247 RLKRFTAEAAHQIRTPLAGLNSQAQNALD----------ETDEVLR- 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ il++++ l + +n+lL + + +
CP000749_4 283 ----------QKQLQHILESSNVLTNTVNQLLSRATLTHR 312

CP000749_1784: domain 1 of 1, from 258 to 315: score 40.8, E = 3.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a+++H+LRTPL+++r++ae +++ + +e q
CP000749_1 258 QLENYTADAAHQLRTPLASLRALAENARD---------NTSPERQ-- 293

peLRledpeyreyletilreaerllrLindlL<-*
+++le i ++ + l++ + lL
CP000749_1 294 ----------HQALENIVKQCDTLSQTVTLLL 315

CP000749_0413: domain 1 of 1, from 244 to 310: score 37.2, E = 3.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a s + +++H+LRTPL +r+ +e l+ ++ +t+ +e q
CP000749_0 244 AVSGVIDAIAHDLRTPLGRLRLRLESHLN-----TLDETPINESQ-- 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ +l+e++++l + +L+lsr+e+
CP000749_0 284 -------------LQEMLEELDHILTTFSAMLELSRLEHK 310

CP000749_0902: domain 1 of 1, from 530 to 598: score 34.2, E = 2.6e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ a+l HEL++PLtaIr++a l++l + eq+
CP000749_0 530 VLGQLSAGLNHELNQPLTAIRAFAGNGLKFL-------DRGQYEQA- 568

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ i + ++++ ++i ++ ++r +
CP000749_0 569 ----------HANLQHISQLGHHMGDIIARFKVFARKGDV 598

CP000749_4300: domain 1 of 1, from 283 to 341: score 33.8, E = 3.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a++sH+L+TP+t +r+ ae+L e
CP000749_4 283 DRERLFASISHDLKTPITRLRLRAEMLDE------------------ 311

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++r++e l+ L+ L+ +
CP000749_4 312 ----------DDIRDAMIRDLEDLDMLLKGALQSVKETDI 341

CP000749_0667: domain 1 of 1, from 183 to 248: score 33.7, E = 3.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ ++sHELR P+ +r+ +e+ + ++++
CP000749_0 183 SQRNLINAVSHELRSPIGRLRFQLEMVAD--------TSDRNLIN-- 219

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l + +++ +++++ +lL ++++e+
CP000749_0 220 -----------QHLLGMSADIDDMDQMVHELLSYTKLENS 248

CP000749_0299: domain 1 of 1, from 238 to 302: score 31.0, E = 2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++ +++++HELRTPLt ++ + + e+++ e+
CP000749_0 238 EVRDITSHVAHELRTPLTRLQHKLINISERVE----------GEE-- 272

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ le +++e+e+++ L + ++ ls e+g
CP000749_0 273 ----------LKELEQAIKETEQIQVLFRSIMRLSEVETG 302

CP000749_0474: domain 1 of 1, from 423 to 490: score 30.1, E = 3.8e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s f+ + HEL+TPLt+I +++L + + +l
CP000749_0 423 DQSNFMMLITHELKTPLTVIDSVLQTLDI---------ERINISSAL 460

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++i+++++ l++Lin L + e+
CP000749_0 461 ----------AERHNIIKKSIDELNSLINTTLMTEHSESK 490

CP000749_2843: domain 1 of 1, from 476 to 544: score 27.9, E = 1.6e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ +++HEL++PLt+Ir++a +++ l ++++q+
CP000749_2 476 AIGQMSTAIAHELNQPLTGIRTLAYTAELLL-------KRQDSKQA- 514

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l +++ + r+++L ++l l+ + +
CP000749_2 515 ----------LKTLVDLESLVVRMQKLTSELKVLAYRRPE 544


Histogram of all scores:
score obs exp (one = represents 16 sequences)
----- --- ---
-14 6 0|=
-13 34 3|*==
-12 166 101|======*====
-11 443 526|============================ *
-10 785 976|================================================== *
-9 901 1008|========================================================= *
-8 742 754|===============================================*
-7 539 475|=============================*====
-6 334 273|=================*===
-5 206 150|=========*===
-4 105 80|====*==
-3 52 42|==*=
-2 33 22|=*=
-1 18 11|*=
0 11 6|*
1 8 3|*
2 3 1|*
3 4 0|=
4 1 0|=
5 1 0|=
6 1 0|=
7 0 0|
8 0 0|
> 9 46 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 168.0291
P(chi-square) = 1.207e-29

Total sequences searched: 4439

Whole sequence top hits:
tophits_s report:
Total hits: 39
Satisfying E cutoff: 39
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 38
Satisfying E cutoff: 38
Total memory: 36K


Acknowledgements:

This research is funded by:

Developed by: