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Thermotogae
Classification of phyla is from NCBI page
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19 projects found  

3 accessions found for Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'  

Data for CP000777  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000777.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000777_2831 CDS_3127545-3129920 102.0 1.2e-28 1
CP000777_0677 CDS_734879-731385 97.0 3e-27 1
CP000777_0853 CDS_928543-930510 96.5 4.2e-27 1
CP000777_0460 CDS_487834-486011 96.0 5.8e-27 1
CP000777_3088 CDS_3398746-3400356 89.4 4.3e-25 1
CP000777_1400 CDS_1549997-1552741 87.5 1.5e-24 1
CP000777_0092 CDS_97782-99398 87.0 2.1e-24 1
CP000777_1461 CDS_1618483-1622103 87.0 2.1e-24 1
CP000777_0387 CDS_403592-406330 86.4 3.1e-24 1
CP000777_1013 CDS_1117616-1115178 86.3 3.4e-24 1
CP000777_0407 CDS_425226-423094 86.1 3.8e-24 1
CP000777_3037 CDS_3346311-3347675 80.1 1.9e-22 1
CP000777_1499 CDS_1669195-1667573 79.7 2.5e-22 1
CP000777_0903 CDS_989864-993061 79.6 2.7e-22 1
CP000777_0475 CDS_507392-505878 67.6 6.7e-19 1
CP000777_2322 CDS_2537816-2535645 67.1 9e-19 1
CP000777_1984 CDS_2184163-2185317 52.9 9.6e-15 1
CP000777_0383 CDS_399210-400649 52.6 1.1e-14 1
CP000777_0078 CDS_84598-82805 49.6 8.3e-14 1
CP000777_2498 CDS_2745151-2743370 48.7 1.5e-13 1
CP000777_1642 CDS_1816136-1815024 43.5 4.4e-12 1
CP000777_1133 CDS_1255312-1256994 41.7 1.4e-11 1
CP000777_1341 CDS_1491739-1490852 40.3 3.7e-11 1
CP000777_2217 CDS_2418680-2416269 39.8 5.1e-11 1
CP000777_1841 CDS_2032868-2031048 37.7 1.9e-10 2
CP000777_0077 CDS_82818-81301 37.3 2.6e-10 1
CP000777_2323 CDS_2539785-2537860 37.0 3.1e-10 1
CP000777_0610 CDS_659239-657053 36.5 4.2e-10 2
CP000777_1564 CDS_1733114-1734937 36.4 4.5e-10 1
CP000777_2967 CDS_3278639-3276207 35.4 8.7e-10 1
CP000777_1978 CDS_2180050-2178350 35.0 1.1e-09 1
CP000777_3155 CDS_3466199-3467437 32.0 8.1e-09 1
CP000777_2478 CDS_2721275-2724322 28.7 6.8e-08 2
CP000777_0816 CDS_887632-885251 27.6 1.4e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000777_2831 1/1 406 471 .. 1 87 [] 102.0 1.2e-28
CP000777_0677 1/1 655 720 .. 1 87 [] 97.0 3e-27
CP000777_0853 1/1 270 335 .. 1 87 [] 96.5 4.2e-27
CP000777_0460 1/1 303 368 .. 1 87 [] 96.0 5.8e-27
CP000777_3088 1/1 160 225 .. 1 87 [] 89.4 4.3e-25
CP000777_1400 1/1 525 590 .. 1 87 [] 87.5 1.5e-24
CP000777_0092 1/1 299 367 .. 1 87 [] 87.0 2.1e-24
CP000777_1461 1/1 593 658 .. 1 87 [] 87.0 2.1e-24
CP000777_0387 1/1 532 597 .. 1 87 [] 86.4 3.1e-24
CP000777_1013 1/1 430 495 .. 1 87 [] 86.3 3.4e-24
CP000777_0407 1/1 324 389 .. 1 87 [] 86.1 3.8e-24
CP000777_3037 1/1 230 298 .. 1 87 [] 80.1 1.9e-22
CP000777_1499 1/1 319 384 .. 1 87 [] 79.7 2.5e-22
CP000777_0903 1/1 428 496 .. 1 87 [] 79.6 2.7e-22
CP000777_0475 1/1 269 337 .. 1 87 [] 67.6 6.7e-19
CP000777_2322 1/1 355 420 .. 1 87 [] 67.1 9e-19
CP000777_1984 1/1 158 226 .. 1 87 [] 52.9 9.6e-15
CP000777_0383 1/1 259 322 .. 1 87 [] 52.6 1.1e-14
CP000777_0078 1/1 366 433 .. 1 87 [] 49.6 8.3e-14
CP000777_2498 1/1 363 430 .. 1 87 [] 48.7 1.5e-13
CP000777_1642 1/1 160 228 .. 1 87 [] 43.5 4.4e-12
CP000777_1133 1/1 334 402 .. 1 87 [] 41.7 1.4e-11
CP000777_1341 1/1 88 153 .. 1 87 [] 40.3 3.7e-11
CP000777_2217 1/1 453 521 .. 1 87 [] 39.8 5.1e-11
CP000777_0077 1/1 284 350 .. 1 87 [] 37.3 2.6e-10
CP000777_2323 1/1 401 473 .. 1 87 [] 37.0 3.1e-10
CP000777_1564 1/1 370 442 .. 1 87 [] 36.4 4.5e-10
CP000777_2967 1/1 460 528 .. 1 87 [] 35.4 8.7e-10
CP000777_1978 1/1 239 281 .. 1 60 [. 35.0 1.1e-09
CP000777_0610 1/2 409 442 .. 1 43 [. 32.6 5.6e-09
CP000777_1841 1/2 293 332 .. 1 66 [. 32.2 7e-09
CP000777_3155 1/1 179 247 .. 1 87 [] 32.0 8.1e-09
CP000777_2478 1/2 692 720 .. 1 29 [. 28.1 1e-07
CP000777_0816 1/1 490 524 .. 1 44 [. 27.6 1.4e-07

Alignments of top-scoring domains:
CP000777_2831: domain 1 of 1, from 406 to 471: score 102.0, E = 1.2e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ flan+sHE+RTPL++I+g++elLl+ ++l eeq
CP000777_2 406 AKGNFLANMSHEIRTPLNGIIGFTELLLN---------SPLQEEQ-- 441

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl+ i ++++ll+L+n++Ld+s+i++g
CP000777_2 442 ----------KEYLKNIFFSGKSLLELVNQILDFSKIDSG 471

CP000777_0677: domain 1 of 1, from 655 to 720: score 97.0, E = 3e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTPL++++g+a+lL + t+l+ q
CP000777_0 655 AKSNFLANMSHEIRTPLNGVIGFADLLMR---------TDLNQVQ-- 690

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y et++ +a +ll+Lind+Ld+s+ie+g
CP000777_0 691 ----------RKYMETVHLSALSLLDLINDILDFSKIESG 720

CP000777_0853: domain 1 of 1, from 270 to 335: score 96.5, E = 4.2e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f+an+sHE+RTPL++++g+ elL + t+l+++q
CP000777_0 270 AKSDFVANMSHEIRTPLNGVIGFNELLMT---------TNLDSDQ-- 305

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey++ ++++a+ ll +ind+Ld+s+ieag
CP000777_0 306 ----------KEYVKNAISSAHGLLGIINDILDISKIEAG 335

CP000777_0460: domain 1 of 1, from 303 to 368: score 96.0, E = 5.8e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHE+RTPL++++g +++L e t+l++eq
CP000777_0 303 AKSEFLASMSHEIRTPLNGVIGITQILFE---------TDLDAEQ-- 338

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ti ++++ ll+++nd+Ld+s+i+ag
CP000777_0 339 ----------KSYLKTIADAGKALLNILNDILDFSKIDAG 368

CP000777_3088: domain 1 of 1, from 160 to 225: score 89.4, E = 4.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla++sHE+RTPL+aI+g+a++L e t+l+ eq
CP000777_3 160 AKTDFLASMSHEIRTPLNAILGMADTLTE---------TNLTNEQ-- 195

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
eyl +++++++ l ++ind+Ldlsrie+g
CP000777_3 196 ----------MEYLTVLRNSGKALYNIINDILDLSRIESG 225

CP000777_1400: domain 1 of 1, from 525 to 590: score 87.5, E = 1.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTPL++I+gy++lL e t +
CP000777_1 525 AKSEFLANMSHEIRTPLNGIIGYSDLLAE---------TLVDTSF-- 560

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey ++++++a+ ll+++nd+Ld+s++eag
CP000777_1 561 ----------NEYAQIVKQSAHTLLSIVNDILDFSKAEAG 590

CP000777_0092: domain 1 of 1, from 299 to 367: score 87.0, E = 2.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHEL+TP++aI+ yael e++ + s+e++
CP000777_0 299 MKSLFLANISHELKTPIHAILSYAELGAEKS-------ASVSPEKI- 337

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+++i+++++rll+L+++lLd++++e+g
CP000777_0 338 ----------KEYFQIIDSSGKRLLSLLENLLDIAKLESG 367

CP000777_1461: domain 1 of 1, from 593 to 658: score 87.0, E = 2.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTP++aI+g++e+Ll + ++ q+
CP000777_1 593 TKSTFLANMSHEIRTPMNAIIGFTEVLLS----------DPNPNQN- 628

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ leti+++a++llrL+nd+L ++++ g
CP000777_1 629 ----------KKHLETIRNSAKSLLRLLNDVLNSAKLDRG 658

CP000777_0387: domain 1 of 1, from 532 to 597: score 86.4, E = 3.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTP+++++g++ lL+e t+ + eq
CP000777_0 532 VKSEFLANMSHEIRTPMNGVLGMLTLLEE---------TNVDIEQ-- 567

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ +++++ +ll +ind+Ld s++e+
CP000777_0 568 ----------KDYLDNAKKSVLSLLTIINDILDVSKLENH 597

CP000777_1013: domain 1 of 1, from 430 to 495: score 86.3, E = 3.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fl+++sHE+RTP+++I+g++++ t l++eq
CP000777_1 430 FKSAFLSTMSHEIRTPMNGILGMTQMFGQ---------TSLTDEQ-- 465

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl+ i+ ++e ll L+nd+Ldl+++eag
CP000777_1 466 ----------KEYLSLIQFSGENLLLLVNDILDLTKLEAG 495

CP000777_0407: domain 1 of 1, from 324 to 389: score 86.1, E = 3.8e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTPL++++g++elL t l+++q
CP000777_0 324 AKDSFLATMSHEIRTPLSGLIGMLELLYQ---------TSLNDDQ-- 359

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ +l ++++llr+++d+Ldls+ie+g
CP000777_0 360 ----------KSLVNNALVSGNSLLRILSDILDLSKIEEG 389

CP000777_3037: domain 1 of 1, from 230 to 298: score 80.1, E = 1.9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ n+sHEL+TP+t+I+gyae+L+ +l +l +e +
CP000777_3 230 IREQFFQNASHELKTPITSIKGYAETLEYKL--------KLQPESNE 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+ ilr ++rl r+++d+L+ sr+e+
CP000777_3 269 ----------RKFLDAILRNTDRLIRIVEDMLTVSRLENH 298

CP000777_1499: domain 1 of 1, from 319 to 384: score 79.7, E = 2.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHELRTPL++I+g+++l++ +e +
CP000777_1 319 AKTEFLAHVSHELRTPLNSIIGFSKLIQL---------PENDITG-- 354

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl+ i++ + rll++in++L l +ie+g
CP000777_1 355 ----------KEYLQYIYSGGTRLLKMINEILSLMKIESG 384

CP000777_0903: domain 1 of 1, from 428 to 496: score 79.6, E = 2.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+eflan sHEL+TPL++I+g ae + + ++ ++l+ eq
CP000777_0 428 LKDEFLANTSHELKTPLNGIIGIAESMFD------GIGGKLNQEQ-- 466

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l i ++++rl++L++d+Ld+s++ +
CP000777_0 467 ----------RQNLGMIVSSGKRLSSLVDDILDFSKMKNR 496

CP000777_0475: domain 1 of 1, from 269 to 337: score 67.6, E = 6.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++ +sHELRTPLt+I+g ++lLl+++ +e s ++
CP000777_0 269 LKNEFISLVSHELRTPLTSIKGSIDLLLAGVA------GEVSNQT-- 307

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l++ ++ ++rl r + dlLd++ +++g
CP000777_0 308 ----------KSLLNICRKNTQRLVRFVTDLLDIEALDSG 337

CP000777_2322: domain 1 of 1, from 355 to 420: score 67.1, E = 9e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fl+n+sHELRTPL+a++g + Lle ++ eq
CP000777_2 355 AKSDFLSNMSHELRTPLNAVIGISLWLLE---------ENPKTEQ-- 390

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ ++ ++e+ll+Lind+Ld+ +ie+
CP000777_2 391 ----------LENLKNLKFSSESLLSLINDILDFNKIEER 420

CP000777_1984: domain 1 of 1, from 158 to 226: score 52.9, E = 9.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++++++HEL++PLt+I+++++ L++ ++++++eq+
CP000777_1 158 SLGILISGIAHELNNPLTGISLTLQNLKA-------NWQNQPPEQI- 196

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ i++++ r +++d+ +++ +
CP000777_1 197 ----------EKRLDMIKNDISRAAIIVSDIISFAKTDKV 226

CP000777_0383: domain 1 of 1, from 259 to 322: score 52.6, E = 1.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l HE++ PL++I++ +el+++ ++++
CP000777_0 259 YVESYVQTLTHEIKSPLSSILASVELIQT------------HPKEM- 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ti+ ea+r+++Li++lL+ls +e
CP000777_0 293 ----------ERLTKTIDAEAKRIQNLIDQLLELSSLEGK 322

CP000777_0078: domain 1 of 1, from 366 to 433: score 49.6, E = 8.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +e +a+l+HE+++PL + ++y+e L + +e ++ +r
CP000777_0 366 SIGEIAAGLAHEINNPLQSALLYLEDLIT--------VDETDANER- 403

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l++i+ + r+++L+ lLdl r+e++
CP000777_0 404 ----------KNILQKIEAANLRIRDLVKALLDLGRMESP 433

CP000777_2498: domain 1 of 1, from 363 to 430: score 48.7, E = 1.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++fl+ +sH+LR PL++I++++++L e++ ++ +
CP000777_2 363 TKDRFLSIISHDLRGPLAGIKMLLKVLNEDM-------KKKEDAL-- 400

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++++ +++e+ +L+++lL+ s+++ g
CP000777_2 401 ----------AGMTQSLVDATESVFSLLENLLEWSKLQRG 430

CP000777_1642: domain 1 of 1, from 160 to 228: score 43.5, E = 4.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++sHE+++PLt+I+ +a+l+ e+ + s + +
CP000777_1 160 TIALVASGISHEINNPLTSILNLADLIALEA-------KKNSNPSL- 198

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++i +e+er+ +++ +l +s+ +
CP000777_1 199 ----------KEKADKISEESERIAKIVKNLVSYSQSTSS 228

CP000777_1133: domain 1 of 1, from 334 to 402: score 41.7, E = 1.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ f++ ++H+LR+PL + + +elL +e+ ++ s+ ++
CP000777_1 334 TKDVFFSIIAHDLRNPLGSFKQITELLYTEF-------DTYSDSEK- 372

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e + i+++a r L+++lLd +r ++g
CP000777_1 373 ----------KETIFEIQKSASRVYGLLEQLLDWARTQTG 402

CP000777_1341: domain 1 of 1, from 88 to 153: score 40.3, E = 3.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+f++++ HE++TP++++++ +e+Lle ++ ++e
CP000777_1 88 LIADFFSTVTHEMKTPIASLQLQIEVLLE---------ATTNPEL-- 123

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le+i +e +r++++ + l+ + +g
CP000777_1 124 ----------KRKLEKIWKENQRIESQMGNAFYLASLMQG 153

CP000777_2217: domain 1 of 1, from 453 to 521: score 39.8, E = 5.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f++ +sH++R PL +I+ + lL e + + ls+e +
CP000777_2 453 LKDKFISIVSHDIRSPLFGISSVVNLLTE-------SPPSLSPERA- 491

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l + ++ +l+++++l +sr ++
CP000777_2 492 ----------KQVLGEASTGLKNILSMVEELIKYSRFQNA 521

CP000777_0077: domain 1 of 1, from 284 to 350: score 37.3, E = 2.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +a++ HE+++ LtaI+g++e++ + ++++ +
CP000777_0 284 FLSVVAASIGHEINNSLTAIQGFVEMASR---------ENADLMLK- 320

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l++ l+++e l++L ++lL+l +
CP000777_0 321 ----------DRALKVTLNQTEKLRALTSNLLQLGKSVKS 350

CP000777_2323: domain 1 of 1, from 401 to 473: score 37.0, E = 3.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+ +++H++++ Lt +++y++ L + ++++ + +++
CP000777_2 401 ALGTFAGGIAHDFNNLLTPMMAYISFLNA-------EWSKNESNDMI 440

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++e i ++++r +Li+++L++s+i++
CP000777_2 441 QKS-------LPAIEGISKSLDRAKNLIQQILTYSKIDHS 473

CP000777_1564: domain 1 of 1, from 370 to 442: score 36.4, E = 4.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a e + ++HE+++PLt I++ a+ +++++ + + + e +
CP000777_1 370 AWKEVAQRMAHEIKNPLTPIQLSAQRIQRKF----QNPKKENLESV- 411

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++eti+ +++ l++L+ ++ +++r+ +
CP000777_1 412 ---------IFDATETIIGQVRVLEHLVKEFSEFARMPVP 442

CP000777_2967: domain 1 of 1, from 460 to 528: score 35.4, E = 8.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k f++ +sH+LR PL+++ ++++ + +e see++
CP000777_2 460 WKANFVSLISHDLRSPLNSVNQILDVIDFSF-------SETSEEEK- 498

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l++ + + + l+++++lLd sr +a
CP000777_2 499 ----------KKFLDICKTGVTQSLKMLEQLLDVSRFDAF 528

CP000777_1978: domain 1 of 1, from 239 to 281: score 35.0, E = 1.1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HE+++P++aI++ ae L+e l+ ++els q
CP000777_1 239 SLGQLVAGIAHEINNPIAAIQASAENLKESLF-----ESELSVFQ-- 278

peLRledpeyrey<-*
+e+
CP000777_1 279 ----------KEL 281

CP000777_0610: domain 1 of 2, from 409 to 442: score 32.6, E = 5.6e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelse<-*
++++++a+++HE+++PL+aI++ +e+L e ++++e
CP000777_0 409 ELGKLVAGVAHEINNPLSAIKASIETLME---------SKQNE 442

CP000777_1841: domain 1 of 2, from 293 to 332: score 32.2, E = 7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a+++HE+++PL+aI++++e L+++l
CP000777_1 293 TLGQLVASVAHEINNPLAAISAFSEQLQNRL---------------- 323

peLRledpeyreyletilr<-*
++ +++l+
CP000777_1 324 ----------GDFASRLLE 332

CP000777_3155: domain 1 of 1, from 179 to 247: score 32.0, E = 8.1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f++ ++H+LR PL a + +++lL e++ ls+e+r
CP000777_3 179 TKDKFFSIIAHDLRGPLGAHKDFTKLLIERF-------VSLSDEER- 217

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i +++e l +L ++lL + ++g
CP000777_3 218 ----------EINLQIISESSEKLYSLMENLLHWASNQNG 247

CP000777_2478: domain 1 of 2, from 692 to 720: score 28.1, E = 1e-07
*->akseflanlsHELRTPLtaIrgyaelLle<-*
++++++a+++HE+++P+ aI++ ++l+le
CP000777_2 692 SLGQLIAGIAHEINNPMGAIQASSQLILE 720

CP000777_0816: domain 1 of 1, from 490 to 524: score 27.6, E = 1.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelsee<-*
+++ +a+++HE+++PL+aI+g ++ +++ + s++
CP000777_0 490 TLGKIAASVAHEINNPLAAIKGSIQFIKD---------GQFSDD 524


Histogram of all scores:
score obs exp (one = represents 12 sequences)
----- --- ---
-14 2 0|=
-13 36 2|*==
-12 160 74|======*=======
-11 340 388|============================= *
-10 614 720|==================================================== *
-9 674 744|========================================================= *
-8 539 557|============================================= *
-7 349 351|=============================*
-6 228 202|================*==
-5 126 110|=========*=
-4 78 59|====*==
-3 34 31|==*
-2 22 16|=*
-1 10 8|*
0 8 4|*
1 3 2|*
2 1 1|*
3 1 0|=
4 1 0|=
> 5 51 -|=====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 139.3512
P(chi-square) = 2.207e-24

Total sequences searched: 3277

Whole sequence top hits:
tophits_s report:
Total hits: 34
Satisfying E cutoff: 34
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 34
Satisfying E cutoff: 34
Total memory: 34K


Acknowledgements:

This research is funded by:

Developed by: