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Classification of phyla is from NCBI page
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2 accessions found for Xanthobacter autotrophicus Py2  

Data for CP000781  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000781.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000781_1395 CDS_1610643-1612097 89.8 4.8e-25 1
CP000781_1613 CDS_1844626-1842314 89.2 7.3e-25 1
CP000781_2411 CDS_2715878-2713041 89.0 8.4e-25 1
CP000781_0196 CDS_196556-198088 83.2 3.6e-23 1
CP000781_3292 CDS_3696452-3695616 81.2 1.3e-22 1
CP000781_3266 CDS_3660205-3662718 76.6 2.7e-21 1
CP000781_3206 CDS_3590392-3587690 76.1 3.8e-21 1
CP000781_1790 CDS_2033679-2032066 70.4 1.6e-19 1
CP000781_2827 CDS_3175221-3177029 64.6 6.7e-18 1
CP000781_2247 CDS_2523877-2522444 61.7 4.4e-17 1
CP000781_0058 CDS_65297-61785 60.3 1.1e-16 1
CP000781_1521 CDS_1741204-1739795 60.1 1.3e-16 1
CP000781_1067 CDS_1234897-1236231 57.8 5.7e-16 1
CP000781_4362 CDS_4881099-4879930 57.3 8.1e-16 1
CP000781_0984 CDS_1111535-1109547 55.7 2.2e-15 1
CP000781_1025 CDS_1188165-1186420 53.6 8.6e-15 1
CP000781_3368 CDS_3786783-3785428 50.4 7.2e-14 1
CP000781_1271 CDS_1474158-1475507 48.3 2.7e-13 1
CP000781_1106 CDS_1285440-1287563 47.5 4.6e-13 1
CP000781_4360 CDS_4878163-4875926 47.0 6.4e-13 1
CP000781_3488 CDS_3919603-3920991 46.3 1e-12 1
CP000781_0626 CDS_711187-713274 46.3 1e-12 1
CP000781_4012 CDS_4481279-4479387 45.9 1.3e-12 1
CP000781_1281 CDS_1487593-1485521 45.6 1.7e-12 1
CP000781_3900 CDS_4355265-4357268 45.4 1.9e-12 1
CP000781_2011 CDS_2287005-2284111 41.6 2.2e-11 1
CP000781_1761 CDS_2000760-2002607 41.6 2.2e-11 1
CP000781_1731 CDS_1965820-1964315 41.5 2.4e-11 1
CP000781_4596 CDS_5125490-5122917 40.4 4.8e-11 1
CP000781_0304 CDS_313013-314347 40.1 6e-11 1
CP000781_2407 CDS_2706854-2708335 38.4 1.8e-10 1
CP000781_1540 CDS_1763327-1764916 35.5 1.2e-09 1
CP000781_2542 CDS_2852314-2853696 33.6 4.1e-09 1
CP000781_0343 CDS_359792-358413 33.1 5.7e-09 1
CP000781_0373 CDS_388340-389791 30.3 3.5e-08 1
CP000781_3912 CDS_4367584-4369035 30.2 3.8e-08 1
CP000781_2319 CDS_2609226-2607712 29.8 4.8e-08 1
CP000781_2141 CDS_2417155-2418576 28.1 1.5e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000781_1395 1/1 232 301 .. 1 87 [] 89.8 4.8e-25
CP000781_1613 1/1 529 598 .. 1 87 [] 89.2 7.3e-25
CP000781_2411 1/1 689 756 .. 1 87 [] 89.0 8.4e-25
CP000781_0196 1/1 274 341 .. 1 87 [] 83.2 3.6e-23
CP000781_3292 1/1 48 117 .. 1 87 [] 81.2 1.3e-22
CP000781_3266 1/1 601 669 .. 1 87 [] 76.6 2.7e-21
CP000781_3206 1/1 667 735 .. 1 87 [] 76.1 3.8e-21
CP000781_1790 1/1 298 365 .. 1 87 [] 70.4 1.6e-19
CP000781_2827 1/1 367 432 .. 1 87 [] 64.6 6.7e-18
CP000781_2247 1/1 241 307 .. 1 87 [] 61.7 4.4e-17
CP000781_0058 1/1 806 871 .. 1 87 [] 60.3 1.1e-16
CP000781_1521 1/1 238 303 .. 1 87 [] 60.1 1.3e-16
CP000781_1067 1/1 227 292 .. 1 87 [] 57.8 5.7e-16
CP000781_4362 1/1 154 218 .. 1 87 [] 57.3 8.1e-16
CP000781_0984 1/1 289 354 .. 1 87 [] 55.7 2.2e-15
CP000781_1025 1/1 364 430 .. 1 87 [] 53.6 8.6e-15
CP000781_3368 1/1 232 297 .. 1 87 [] 50.4 7.2e-14
CP000781_1271 1/1 238 295 .. 1 87 [] 48.3 2.7e-13
CP000781_1106 1/1 460 529 .. 1 87 [] 47.5 4.6e-13
CP000781_4360 1/1 503 574 .. 1 87 [] 47.0 6.4e-13
CP000781_3488 1/1 240 306 .. 1 87 [] 46.3 1e-12
CP000781_0626 1/1 299 376 .. 1 87 [] 46.3 1e-12
CP000781_4012 1/1 389 457 .. 1 87 [] 45.9 1.3e-12
CP000781_1281 1/1 458 525 .. 1 87 [] 45.6 1.7e-12
CP000781_3900 1/1 441 509 .. 1 87 [] 45.4 1.9e-12
CP000781_2011 1/1 452 524 .. 1 87 [] 41.6 2.2e-11
CP000781_1761 1/1 395 463 .. 1 87 [] 41.6 2.2e-11
CP000781_1731 1/1 273 343 .. 1 87 [] 41.5 2.4e-11
CP000781_4596 1/1 486 552 .. 1 87 [] 40.4 4.8e-11
CP000781_0304 1/1 209 275 .. 1 87 [] 40.1 6e-11
CP000781_2407 1/1 264 322 .. 1 87 [] 38.4 1.8e-10
CP000781_1540 1/1 301 370 .. 1 87 [] 35.5 1.2e-09
CP000781_2542 1/1 257 315 .. 1 87 [] 33.6 4.1e-09
CP000781_0343 1/1 208 303 .. 1 87 [] 33.1 5.7e-09
CP000781_0373 1/1 257 315 .. 1 87 [] 30.3 3.5e-08
CP000781_3912 1/1 263 329 .. 1 87 [] 30.2 3.8e-08
CP000781_2319 1/1 254 342 .. 1 87 [] 29.8 4.8e-08
CP000781_2141 1/1 264 305 .. 1 66 [. 28.1 1.5e-07

Alignments of top-scoring domains:
CP000781_1395: domain 1 of 1, from 232 to 301: score 89.8, E = 4.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHELRTPL+aI+g++elL +e ++l++ +
CP000781_1 232 AKSHFLAAMSHELRTPLNAILGFSELLATETG------APLDDARK- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++i++++++ll L+nd+Ldlsr eag
CP000781_1 272 ----------ADYARIIHESGQHLLGLVNDILDLSRVEAG 301

CP000781_1613: domain 1 of 1, from 529 to 598: score 89.2, E = 7.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL+aI+g++e+++ +++ ++l++e+
CP000781_1 529 AKSEFLANMSHELRTPLNAIIGFSEIMESGMF------GPLGSEK-- 567

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ey i+ ++ +ll+ ind+Ld+s+ieag
CP000781_1 568 ---------YAEYCTDIKGSGTYLLDVINDILDMSKIEAG 598

CP000781_2411: domain 1 of 1, from 689 to 756: score 89.0, E = 8.4e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f++++ HELRTPLtaIr+++el+l+ +++ e qr
CP000781_2 689 LKDDFVSSVTHELRTPLTAIRALSELMLD--------APDMEEAQR- 726

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l +i e+erl rL+n++Ld++++e+g
CP000781_2 727 ----------QEFLAIIVGESERLGRLVNQVLDMAKLESG 756

CP000781_0196: domain 1 of 1, from 274 to 341: score 83.2, E = 3.6e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPL++++g++e+L+ +++++ ++
CP000781_0 274 MRADFVANASHELRTPLASLSGFIETLQG---------PARNDAPAR 311

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l ++ +a+r++rLi+dlL lsrie +
CP000781_0 312 ----------ERFLAIMAAQARRMSRLIDDLLSLSRIELN 341

CP000781_3292: domain 1 of 1, from 48 to 117: score 81.2, E = 1.3e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHELRTPL++++g++e++ + + l++
CP000781_3 48 AKSRFLAEMSHELRTPLNTVMGFSEMMAD---------EVLGPHR-- 83

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+p y y + i+ ++++ll+L +dlLdl+rie+g
CP000781_3 84 ------VPAYGTYARDIHASGQHLLALADDLLDLARIESG 117

CP000781_3266: domain 1 of 1, from 601 to 669: score 76.6, E = 2.7e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ f+ ++s LRTPL++++gya++L+++l ++l+ q
CP000781_3 601 LKNAFVGHVSYHLRTPLNTLLGYADMLRDGLA------GPLNTRQ-- 639

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yle +++++++l++Li+d+Ldl+ i+ag
CP000781_3 640 ----------QDYLEHMRQSSDQLRALIDDILDLASIDAG 669

CP000781_3206: domain 1 of 1, from 667 to 735: score 76.1, E = 3.8e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +l ++sH+L+TPL++I+g+a +L+ ++ ++l+ee r
CP000781_3 667 LRTALLTSISHDLKTPLASIMGAAGTLRSFF-------SALTEEAR- 705

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+t+++eaerl+r i +lLd++r+e+g
CP000781_3 706 ----------SDLLSTVEEEAERLNRFIANLLDMTRLESG 735

CP000781_1790: domain 1 of 1, from 298 to 365: score 70.4, E = 1.6e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sHELRTPLt+I+g +++ ++ ++ +ee
CP000781_1 298 SRRRFFTDVSHELRTPLTVIIGECDVTQR--------APAIPEELS- 335

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l ti++ a rl r i+dlL +r e+g
CP000781_1 336 ----------RTVLATIRKRAGRLHRRIEDLLRVARSESG 365

CP000781_2827: domain 1 of 1, from 367 to 432: score 64.6, E = 6.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a+++HEL++PLt++r ++e+L ++++ r
CP000781_2 367 AIESFAADVAHELKNPLTSLRSAVETLPL----------AKTDTSR- 402

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ e+i+++++rl+rLi+d+ d sr++a+
CP000781_2 403 ----------NRLMEVIQHDVKRLDRLISDISDASRLDAE 432

CP000781_2247: domain 1 of 1, from 241 to 307: score 61.7, E = 4.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sH++RTPL+ +r++++lL++ + ++e r
CP000781_2 241 LLRRFTADASHQMRTPLAIVRMHVDLLRR---------ESSDPELR- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +++ aerl+rLi +lL+l+r+++
CP000781_2 278 ----------SSVLAELDQGAERLERLITQLLTLARADES 307

CP000781_0058: domain 1 of 1, from 806 to 871: score 60.3, E = 1.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH++ +PL+a r+y+ ++ e ++++e+
CP000781_0 806 SKTRFLAAASHDILQPLNAARLYVTTMVE---------RARGPEE-- 841

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++ ++e+ +++++ lLd+sr+++g
CP000781_0 842 ----------ERLAGNVDASLESVEEILSALLDISRLDSG 871

CP000781_1521: domain 1 of 1, from 238 to 303: score 60.1, E = 1.3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+an++H+LRTPL+ + + + +++ t+ +e
CP000781_1 238 AQRRFVANAAHQLRTPLALLATQVTYARR---------TPDAAER-- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+ ++++++rl rL ++lL+lsr e g
CP000781_1 274 ----------EEALSGVQESTRRLARLASQLLTLSRSEPG 303

CP000781_1067: domain 1 of 1, from 227 to 292: score 57.8, E = 5.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++ +a ++HELRTPL+++++ a+++l+ + ++++r
CP000781_1 227 QERDVTAFAAHELRTPLAGLKTQAQIALA----------AHDAPTR- 262

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ il +++r rL+++lL l+++e
CP000781_1 263 ----------EGALRQILVSVDRTTRLVRQLLALAKLEGT 292

CP000781_4362: domain 1 of 1, from 154 to 218: score 57.3, E = 8.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ s ++++l+HE+++PL++Irg+a+lL+ +++++
CP000781_4 154 SVSALASMLAHEIKNPLSGIRGAAQLLEQ----------SADDDD-- 188

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++ i +ea+r+ +L++++ +s +
CP000781_4 189 ----------RALTRLICEEADRIVKLVDRMEVFSDERPV 218

CP000781_0984: domain 1 of 1, from 289 to 354: score 55.7, E = 2.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fla++sH+LR+P++a+ +++ ++++ +l+++
CP000781_0 289 DKSRFLAAASHDLRQPVHALTMFLGAMQN---------CNLDAPA-- 324

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l i++++ l+ L lLd+sr++ag
CP000781_0 325 ----------RQILGHIDESVSALDGLFTSLLDISRLDAG 354

CP000781_1025: domain 1 of 1, from 364 to 430: score 53.6, E = 8.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a ++HE+R+PL I++ ael ++ t++ + +
CP000781_1 364 TLGQAAAVIAHEIRNPLGIIKTSAELVRR--------KTPMAPSE-- 400

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +l+e++r++rL+ +lLd++r +
CP000781_1 401 ----------DRLMMFVLDEVQRIDRLVKELLDYARPPQC 430

CP000781_3368: domain 1 of 1, from 232 to 297: score 50.4, E = 7.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+an +HELRTP++a ++ ++ L el +e +e++r
CP000781_3 232 AERGFTANSAHELRTPIAAALAQTQRLMVEL-------PEGPEQDR- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i +++rl+rL + lL+l+++e g
CP000781_3 271 -------------AHAIAGALRRLSRLSEKLLQLAKAEGG 297

CP000781_1271: domain 1 of 1, from 238 to 295: score 48.3, E = 2.7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ef+ +++HELRTPL+++++ + + e
CP000781_1 238 AQEEFVGDMAHELRTPLAVMKTQLAVTDE------------------ 266

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y +++++e+ ++rL+++lLd r++
CP000781_1 267 -----------PYARVLEKELVAMERLVEQLLDRVRLGRF 295

CP000781_1106: domain 1 of 1, from 460 to 529: score 47.5, E = 4.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e + +l+HE+++PL +Ir++a+ +l++l l+++++
CP000781_1 460 SLGEVATGLAHEINQPLGVIRLAASNALTGLK------VGLPPDHL- 499

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i++++ r++r+i+ ++ + r ++
CP000781_1 500 ----------AGKLDRIIQQTVRMSRIIDHMRIFGRKSEE 529

CP000781_4360: domain 1 of 1, from 503 to 574: score 47.0, E = 6.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ ++HE+++PLt I++ ae L++++ g++ + ++
CP000781_4 503 AWADVARRIAHEIKNPLTPIQLSAERLKRKY-----GRHITQDRDV- 543

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++ti+r++ + r+++++ ++r+ +
CP000781_4 544 ---------FDQCTDTIIRQVGDIGRMVDEFSSFARMPKP 574

CP000781_3488: domain 1 of 1, from 240 to 306: score 46.3, E = 1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e n++H+L+TPLt +r +e +l+ t+ +e++
CP000781_3 240 GLKEVSDNIAHDLKTPLTRLRNRSEEALR---------TAHTEDE-- 275

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r +le ++e++ l r + lL ++r+eag
CP000781_3 276 ---------WRAALEDTIEESDGLIRTFDALLMIARAEAG 306

CP000781_0626: domain 1 of 1, from 299 to 376: score 46.3, E = 1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldk...v.lagdtelse
a++ +la+++HEL++PL+++ g + lL+e++ k+ +v+++g ++l+
CP000781_0 299 ALGSLLAGVAHELNNPLSVVTGQTMLLREQVLKeanVrSGGLPTLDK 345

eqrlpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++i+ +++r+ r+++ +Ld++r ++
CP000781_0 346 VIQR-------------CDRIETATHRCARIVRSFLDMARQREA 376

CP000781_4012: domain 1 of 1, from 389 to 457: score 45.9, E = 1.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a++ HEL++PLta+rg+a+ + + l+ + + ee
CP000781_4 389 TLGQMAAGITHELNQPLTALRGLADNAGKLLE------QGREEEA-- 427

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l +i ++rl ++ +l+ ++r +
CP000781_4 428 ----------QANLGRITAMVDRLGKITGQLRAFARKSSS 457

CP000781_1281: domain 1 of 1, from 458 to 525: score 45.6, E = 1.7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e +a+++HE+++P+++I+g+++++++ l +++ ++
CP000781_1 458 AIGEITAGVAHEINNPVAVIQGNLDVARDVL-------GPAAAPV-- 495

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++ i+++++r+ +++ lL+++r +
CP000781_1 496 ----------RTEFNLIDQQVHRITIIVSKLLQFARPAEF 525

CP000781_3900: domain 1 of 1, from 441 to 509: score 45.4, E = 1.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ a+l+HE+++PL+a+++++e + ++l el++ +
CP000781_3 441 VIGQLSAGLAHEINQPLAALSTLSENAVRFL--------ELNDTST- 478

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r le+i + ++r+ L +l+ ++r g
CP000781_3 479 ---------VRHNLERICDLVRRMGVLTGQLRSFARRTDG 509

CP000781_2011: domain 1 of 1, from 452 to 524: score 41.6, E = 2.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g++e++++++ dt++++ ++
CP000781_2 452 AVGQLTGGIAHDFNNLLTVIIGNLEAAERRV---PRDDTNKDATDI- 494

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+ ++ a r L ++lL +sr +
CP000781_2 495 ----------RRFLDYGRQGALRAATLTQQLLAFSRRQPL 524

CP000781_1761: domain 1 of 1, from 395 to 463: score 41.6, E = 2.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a+++HE ++P++aIr++ae +++l + ++ +
CP000781_1 395 VLGQIAAGVAHEVNQPVAAIRTFAENSRAFLA------QGQTGPA-- 433

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l ti +er+ ++ +l+ ++r a
CP000781_1 434 ----------VENLATIAALTERIGAITGELRAFARKSAA 463

CP000781_1731: domain 1 of 1, from 273 to 343: score 41.5, E = 2.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PL+aI y++ ++ l++ ++
CP000781_1 273 AMGEMASTLAHELNQPLSAIANYIKGSRR----------LLDAGTV- 308

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + +le++ ++a r ++i++l+d+ ++
CP000781_1 309 -----KVEMLQGALEKAGEQALRAGQIIRRLRDFVSRGES 343

CP000781_4596: domain 1 of 1, from 486 to 552: score 40.4, E = 4.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ LtaI+gy++lLl + +s++
CP000781_4 486 AVGHLAGGVAHDFNNILTAILGYCDLLLV--------KHRQSDPS-- 522

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i++ a+r L+ +lL +sr ++
CP000781_4 523 ----------FPDIMQIKQNANRAAGLVGQLLAFSRRQTL 552

CP000781_0304: domain 1 of 1, from 209 to 275: score 40.1, E = 6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++a+++HEL TPL++I + ++ +++ +++++
CP000781_0 209 AIDGLAAAAAHELGTPLSTIALVVKEMQR--------AMTANDPL-- 245

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e + ++++a+r++++++ l ls +a+
CP000781_0 246 ----------AEDVALLRDQANRCRDILQKLTSLSSGDAP 275

CP000781_2407: domain 1 of 1, from 264 to 322: score 38.4, E = 1.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a+lsH+LRTPLt++r+ ae +
CP000781_2 264 DRTRMFAALSHDLRTPLTSLRLRAEFVAD------------------ 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ e++l + ++ + + L + r++a
CP000781_2 293 ----------DELREKMLGTIAEIQGMAEASLAFVRADAT 322

CP000781_1540: domain 1 of 1, from 301 to 370: score 35.5, E = 1.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++++HEL +PLta++ ++++l+ + + ++ +
CP000781_1 301 ALGELASGIAHELTQPLTALLSQSQAALR------LAVPGGDAVRL- 340

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+ rea+r +++++++d+ +a
CP000781_1 341 ----------DEALRANVREAKRAGEMLQRMRDYISNRAT 370

CP000781_2542: domain 1 of 1, from 257 to 315: score 33.6, E = 4.1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH++RT Lt ++ + L e
CP000781_2 257 QRTTMLAGVSHDMRTILTRFKLELAFLGE------------------ 285

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++++++ l+ +++ L ++r + g
CP000781_2 286 ----------GPETEALKKDVDELQGMLEAYLAFARGDPG 315

CP000781_0343: domain 1 of 1, from 208 to 303: score 33.1, E = 5.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldk.......vlagdte
++++++a+++HEL++P++ + g+a++L++++++ + + v +g ++
CP000781_0 208 SLGRLVAGVAHELNNPISFVYGNAHALKRYAERlityldaVHGGADA 254

lseeqrlpeLR..ledpeyreyletilreaerllrLindlLdlsrieag<
+ +++eLR + + l +l+ aer ++++ dl+ +s +
CP000781_0 255 AALARTRGELRidRALADIPATLAGMLEGAERVRDIVADLRRFSSDNRE 303

-*

CP000781_0 - -

CP000781_0373: domain 1 of 1, from 257 to 315: score 30.3, E = 3.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ l ++sH+LRT Lt +r+ +elL
CP000781_0 257 MRTLVLGAISHDLRTYLTRLRLRLELLPP------------------ 285

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ ++ +++L++d L ++r+
CP000781_0 286 ----------GPQVEKAQADLSGMQALVDDALAFARATFA 315

CP000781_3912: domain 1 of 1, from 263 to 329: score 30.2, E = 3.8e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++++l+HE+++PL ++ ++ +L++ + + r
CP000781_3 263 SLGRLTSALAHEINNPLGGLFNALATLKT---------HGHHAAVR- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l ++r + +++ ++ L l r e+
CP000781_3 300 ----------KSSLGLLERGLVGIRDVVRTTLALYRPEQA 329

CP000781_2319: domain 1 of 1, from 254 to 342: score 29.8, E = 4.8e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f+ +sH+LR PL I+g+++ ++ + +rl
CP000781_2 254 EIQSFAYIVSHDLRSPLVNIMGFTSEIEV---------MRTDLFERL 291

peLRl...........edpeyreyletilreaerllrLindlLdlsriea
LR++ +++++ +++ ++e+l i+ ++ r++rLi +L lsr +
CP000781_2 292 AQLREkagegpeadgeLAADFEEALGFIKTSITRMDRLIHAILALSREGR 341

g<-*

CP000781_2 342 K 342

CP000781_2141: domain 1 of 1, from 264 to 305: score 28.1, E = 1.5e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +a+++H+LRTPLt +r+ ae + + +e+r
CP000781_2 264 SRMRIVAGAAHDLRTPLTRMRLRAEFIPD-------------DEER- 296

peLRledpeyreyletilr<-*
++ l+ +++
CP000781_2 297 ----------AQWLSDLEE 305


Histogram of all scores:
score obs exp (one = represents 17 sequences)
----- --- ---
-15 2 0|=
-14 8 0|=
-13 42 3|*==
-12 178 108|======*====
-11 440 562|========================== *
-10 779 1043|============================================== *
-9 968 1077|========================================================= *
-8 859 806|===============================================*===
-7 586 508|=============================*=====
-6 390 292|=================*=====
-5 208 160|=========*===
-4 95 85|====*=
-3 75 45|==*==
-2 32 23|=*
-1 20 12|*=
0 10 6|*
1 9 3|*
2 0 1|*
3 0 0|
4 2 0|=
5 0 0|
> 6 43 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 240.7007
P(chi-square) = 2.122e-314

Total sequences searched: 4746

Whole sequence top hits:
tophits_s report:
Total hits: 38
Satisfying E cutoff: 38
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 38
Satisfying E cutoff: 38
Total memory: 36K


Acknowledgements:

This research is funded by:

Developed by: