Acidobacteria Actinobacteria Alphaproteobacteria
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Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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19 projects found  

3 accessions found for Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'  

Data for CP000786  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000786.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000786_2927 CDS_3119168-3121543 102.0 1.2e-28 1
CP000786_0700 CDS_729309-725815 97.0 3.1e-27 1
CP000786_0879 CDS_922840-924807 96.5 4.3e-27 1
CP000786_0478 CDS_482231-480441 96.0 6e-27 1
CP000786_3197 CDS_3390369-3391979 89.4 4.5e-25 1
CP000786_1446 CDS_1544617-1547361 87.5 1.5e-24 1
CP000786_0093 CDS_93732-95351 87.0 2.1e-24 1
CP000786_1508 CDS_1613103-1616723 87.0 2.2e-24 1
CP000786_0395 CDS_397995-400760 86.4 3.2e-24 1
CP000786_1045 CDS_1112213-1109790 86.3 3.5e-24 1
CP000786_0419 CDS_419656-417524 86.1 3.9e-24 1
CP000786_3145 CDS_3337934-3339298 80.1 2e-22 1
CP000786_1547 CDS_1663808-1662186 79.7 2.6e-22 1
CP000786_0931 CDS_984476-987673 79.6 2.7e-22 1
CP000786_0494 CDS_501822-500308 67.6 7e-19 1
CP000786_2393 CDS_2530959-2528788 67.1 9.3e-19 1
CP000786_2040 CDS_2178774-2179928 52.9 9.9e-15 1
CP000786_0391 CDS_393640-395079 52.6 1.2e-14 1
CP000786_0078 CDS_80551-78758 49.6 8.6e-14 1
CP000786_2574 CDS_2736765-2734984 48.7 1.6e-13 1
CP000786_1694 CDS_1810748-1809636 43.5 4.6e-12 1
CP000786_1168 CDS_1249924-1251606 41.7 1.5e-11 1
CP000786_1384 CDS_1486351-1485464 40.3 3.8e-11 1
CP000786_2285 CDS_2413349-2410938 39.8 5.2e-11 1
CP000786_1893 CDS_2027365-2025659 37.7 2e-10 2
CP000786_0077 CDS_78765-77254 37.3 2.7e-10 1
CP000786_2394 CDS_2532940-2531003 37.0 3.2e-10 1
CP000786_0633 CDS_653669-651483 36.5 4.3e-10 2
CP000786_1613 CDS_1727727-1729550 36.4 4.7e-10 1
CP000786_3072 CDS_3270262-3267830 35.4 9e-10 1
CP000786_2034 CDS_2174661-2172961 35.0 1.2e-09 1
CP000786_3266 CDS_3457822-3459060 32.0 8.4e-09 1
CP000786_2553 CDS_2712889-2715936 28.7 7.1e-08 2
CP000786_0841 CDS_881929-879548 27.6 1.4e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000786_2927 1/1 406 471 .. 1 87 [] 102.0 1.2e-28
CP000786_0700 1/1 655 720 .. 1 87 [] 97.0 3.1e-27
CP000786_0879 1/1 270 335 .. 1 87 [] 96.5 4.3e-27
CP000786_0478 1/1 292 357 .. 1 87 [] 96.0 6e-27
CP000786_3197 1/1 160 225 .. 1 87 [] 89.4 4.5e-25
CP000786_1446 1/1 525 590 .. 1 87 [] 87.5 1.5e-24
CP000786_0093 1/1 300 368 .. 1 87 [] 87.0 2.1e-24
CP000786_1508 1/1 593 658 .. 1 87 [] 87.0 2.2e-24
CP000786_0395 1/1 541 606 .. 1 87 [] 86.4 3.2e-24
CP000786_1045 1/1 425 490 .. 1 87 [] 86.3 3.5e-24
CP000786_0419 1/1 324 389 .. 1 87 [] 86.1 3.9e-24
CP000786_3145 1/1 230 298 .. 1 87 [] 80.1 2e-22
CP000786_1547 1/1 319 384 .. 1 87 [] 79.7 2.6e-22
CP000786_0931 1/1 428 496 .. 1 87 [] 79.6 2.7e-22
CP000786_0494 1/1 269 337 .. 1 87 [] 67.6 7e-19
CP000786_2393 1/1 355 420 .. 1 87 [] 67.1 9.3e-19
CP000786_2040 1/1 158 226 .. 1 87 [] 52.9 9.9e-15
CP000786_0391 1/1 259 322 .. 1 87 [] 52.6 1.2e-14
CP000786_0078 1/1 366 433 .. 1 87 [] 49.6 8.6e-14
CP000786_2574 1/1 363 430 .. 1 87 [] 48.7 1.6e-13
CP000786_1694 1/1 160 228 .. 1 87 [] 43.5 4.6e-12
CP000786_1168 1/1 334 402 .. 1 87 [] 41.7 1.5e-11
CP000786_1384 1/1 88 153 .. 1 87 [] 40.3 3.8e-11
CP000786_2285 1/1 453 521 .. 1 87 [] 39.8 5.2e-11
CP000786_0077 1/1 282 348 .. 1 87 [] 37.3 2.7e-10
CP000786_2394 1/1 405 477 .. 1 87 [] 37.0 3.2e-10
CP000786_1613 1/1 370 442 .. 1 87 [] 36.4 4.7e-10
CP000786_3072 1/1 460 528 .. 1 87 [] 35.4 9e-10
CP000786_2034 1/1 239 281 .. 1 60 [. 35.0 1.2e-09
CP000786_0633 1/2 409 442 .. 1 43 [. 32.6 5.7e-09
CP000786_1893 1/2 255 294 .. 1 66 [. 32.2 7.3e-09
CP000786_3266 1/1 179 247 .. 1 87 [] 32.0 8.4e-09
CP000786_2553 1/2 692 720 .. 1 29 [. 28.1 1.1e-07
CP000786_0841 1/1 490 524 .. 1 44 [. 27.6 1.4e-07

Alignments of top-scoring domains:
CP000786_2927: domain 1 of 1, from 406 to 471: score 102.0, E = 1.2e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ flan+sHE+RTPL++I+g++elLl+ ++l eeq
CP000786_2 406 AKGNFLANMSHEIRTPLNGIIGFTELLLN---------SPLQEEQ-- 441

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl+ i ++++ll+L+n++Ld+s+i++g
CP000786_2 442 ----------KEYLKNIFFSGKSLLELVNQILDFSKIDSG 471

CP000786_0700: domain 1 of 1, from 655 to 720: score 97.0, E = 3.1e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTPL++++g+a+lL + t+l+ q
CP000786_0 655 AKSNFLANMSHEIRTPLNGVIGFADLLMR---------TDLNQVQ-- 690

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y et++ +a +ll+Lind+Ld+s+ie+g
CP000786_0 691 ----------RKYMETVHLSALSLLDLINDILDFSKIESG 720

CP000786_0879: domain 1 of 1, from 270 to 335: score 96.5, E = 4.3e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f+an+sHE+RTPL++++g+ elL + t+l+++q
CP000786_0 270 AKSDFVANMSHEIRTPLNGVIGFNELLMT---------TNLDSDQ-- 305

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey++ ++++a+ ll +ind+Ld+s+ieag
CP000786_0 306 ----------KEYVKNAISSAHGLLGIINDILDISKIEAG 335

CP000786_0478: domain 1 of 1, from 292 to 357: score 96.0, E = 6e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHE+RTPL++++g +++L e t+l++eq
CP000786_0 292 AKSEFLASMSHEIRTPLNGVIGITQILFE---------TDLDAEQ-- 327

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ti ++++ ll+++nd+Ld+s+i+ag
CP000786_0 328 ----------KSYLKTIADAGKALLNILNDILDFSKIDAG 357

CP000786_3197: domain 1 of 1, from 160 to 225: score 89.4, E = 4.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla++sHE+RTPL+aI+g+a++L e t+l+ eq
CP000786_3 160 AKTDFLASMSHEIRTPLNAILGMADTLTE---------TNLTNEQ-- 195

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
eyl +++++++ l ++ind+Ldlsrie+g
CP000786_3 196 ----------MEYLTVLRNSGKALYNIINDILDLSRIESG 225

CP000786_1446: domain 1 of 1, from 525 to 590: score 87.5, E = 1.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTPL++I+gy++lL e t +
CP000786_1 525 AKSEFLANMSHEIRTPLNGIIGYSDLLAE---------TLVDTSF-- 560

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey ++++++a+ ll+++nd+Ld+s++eag
CP000786_1 561 ----------NEYAQIVKQSAHTLLSIVNDILDFSKAEAG 590

CP000786_0093: domain 1 of 1, from 300 to 368: score 87.0, E = 2.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHEL+TP++aI+ yael e++ + s+e++
CP000786_0 300 MKSLFLANISHELKTPIHAILSYAELGAEKS-------ASVSPEKI- 338

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+++i+++++rll+L+++lLd++++e+g
CP000786_0 339 ----------KEYFQIIDSSGKRLLSLLENLLDIAKLESG 368

CP000786_1508: domain 1 of 1, from 593 to 658: score 87.0, E = 2.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTP++aI+g++e+Ll + ++ q+
CP000786_1 593 TKSTFLANMSHEIRTPMNAIIGFTEVLLS----------DPNPNQN- 628

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ leti+++a++llrL+nd+L ++++ g
CP000786_1 629 ----------KKHLETIRNSAKSLLRLLNDVLNSAKLDRG 658

CP000786_0395: domain 1 of 1, from 541 to 606: score 86.4, E = 3.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTP+++++g++ lL+e t+ + eq
CP000786_0 541 VKSEFLANMSHEIRTPMNGVLGMLTLLEE---------TNVDIEQ-- 576

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ +++++ +ll +ind+Ld s++e+
CP000786_0 577 ----------KDYLDNAKKSVLSLLTIINDILDVSKLENH 606

CP000786_1045: domain 1 of 1, from 425 to 490: score 86.3, E = 3.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fl+++sHE+RTP+++I+g++++ t l++eq
CP000786_1 425 FKSAFLSTMSHEIRTPMNGILGMTQMFGQ---------TSLTDEQ-- 460

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl+ i+ ++e ll L+nd+Ldl+++eag
CP000786_1 461 ----------KEYLSLIQFSGENLLLLVNDILDLTKLEAG 490

CP000786_0419: domain 1 of 1, from 324 to 389: score 86.1, E = 3.9e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTPL++++g++elL t l+++q
CP000786_0 324 AKDSFLATMSHEIRTPLSGLIGMLELLYQ---------TSLNDDQ-- 359

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ +l ++++llr+++d+Ldls+ie+g
CP000786_0 360 ----------KSLVNNALVSGNSLLRILSDILDLSKIEEG 389

CP000786_3145: domain 1 of 1, from 230 to 298: score 80.1, E = 2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ n+sHEL+TP+t+I+gyae+L+ +l +l +e +
CP000786_3 230 IREQFFQNASHELKTPITSIKGYAETLEYKL--------KLQPESNE 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+ ilr ++rl r+++d+L+ sr+e+
CP000786_3 269 ----------RKFLDAILRNTDRLIRIVEDMLTVSRLENH 298

CP000786_1547: domain 1 of 1, from 319 to 384: score 79.7, E = 2.6e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHELRTPL++I+g+++l++ +e +
CP000786_1 319 AKTEFLAHVSHELRTPLNSIIGFSKLIQL---------PENDITG-- 354

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl+ i++ + rll++in++L l +ie+g
CP000786_1 355 ----------KEYLQYIYSGGTRLLKMINEILSLMKIESG 384

CP000786_0931: domain 1 of 1, from 428 to 496: score 79.6, E = 2.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+eflan sHEL+TPL++I+g ae + + ++ ++l+ eq
CP000786_0 428 LKDEFLANTSHELKTPLNGIIGIAESMFD------GIGGKLNQEQ-- 466

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l i ++++rl++L++d+Ld+s++ +
CP000786_0 467 ----------RQNLGMIVSSGKRLSSLVDDILDFSKMKNR 496

CP000786_0494: domain 1 of 1, from 269 to 337: score 67.6, E = 7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++ +sHELRTPLt+I+g ++lLl+++ +e s ++
CP000786_0 269 LKNEFISLVSHELRTPLTSIKGSIDLLLAGVA------GEVSNQT-- 307

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l++ ++ ++rl r + dlLd++ +++g
CP000786_0 308 ----------KSLLNICRKNTQRLVRFVTDLLDIEALDSG 337

CP000786_2393: domain 1 of 1, from 355 to 420: score 67.1, E = 9.3e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fl+n+sHELRTPL+a++g + Lle ++ eq
CP000786_2 355 AKSDFLSNMSHELRTPLNAVIGISLWLLE---------ENPKTEQ-- 390

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ ++ ++e+ll+Lind+Ld+ +ie+
CP000786_2 391 ----------LENLKNLKFSSESLLSLINDILDFNKIEER 420

CP000786_2040: domain 1 of 1, from 158 to 226: score 52.9, E = 9.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++++++HEL++PLt+I+++++ L++ ++++++eq+
CP000786_2 158 SLGILISGIAHELNNPLTGISLTLQNLKA-------NWQNQPPEQI- 196

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ i++++ r +++d+ +++ +
CP000786_2 197 ----------EKRLDMIKNDISRAAIIVSDIISFAKTDKV 226

CP000786_0391: domain 1 of 1, from 259 to 322: score 52.6, E = 1.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l HE++ PL++I++ +el+++ ++++
CP000786_0 259 YVESYVQTLTHEIKSPLSSILASVELIQT------------HPKEM- 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ti+ ea+r+++Li++lL+ls +e
CP000786_0 293 ----------ERLTKTIDAEAKRIQNLIDQLLELSSLEGK 322

CP000786_0078: domain 1 of 1, from 366 to 433: score 49.6, E = 8.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +e +a+l+HE+++PL + ++y+e L + +e ++ +r
CP000786_0 366 SIGEIAAGLAHEINNPLQSALLYLEDLIT--------VDETDANER- 403

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l++i+ + r+++L+ lLdl r+e++
CP000786_0 404 ----------KNILQKIEAANLRIRDLVKALLDLGRMESP 433

CP000786_2574: domain 1 of 1, from 363 to 430: score 48.7, E = 1.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++fl+ +sH+LR PL++I++++++L e++ ++ +
CP000786_2 363 TKDRFLSIISHDLRGPLAGIKMLLKVLNEDM-------KKKEDAL-- 400

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++++ +++e+ +L+++lL+ s+++ g
CP000786_2 401 ----------AGMTQSLVDATESVFSLLENLLEWSKLQRG 430

CP000786_1694: domain 1 of 1, from 160 to 228: score 43.5, E = 4.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++sHE+++PLt+I+ +a+l+ e+ + s + +
CP000786_1 160 TIALVASGISHEINNPLTSILNLADLIALEA-------KKNSNPSL- 198

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++i +e+er+ +++ +l +s+ +
CP000786_1 199 ----------KEKADKISEESERIAKIVKNLVSYSQSTSS 228

CP000786_1168: domain 1 of 1, from 334 to 402: score 41.7, E = 1.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ f++ ++H+LR+PL + + +elL +e+ ++ s+ ++
CP000786_1 334 TKDVFFSIIAHDLRNPLGSFKQITELLYTEF-------DTYSDSEK- 372

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e + i+++a r L+++lLd +r ++g
CP000786_1 373 ----------KETIFEIQKSASRVYGLLEQLLDWARTQTG 402

CP000786_1384: domain 1 of 1, from 88 to 153: score 40.3, E = 3.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+f++++ HE++TP++++++ +e+Lle ++ ++e
CP000786_1 88 LIADFFSTVTHEMKTPIASLQLQIEVLLE---------ATTNPEL-- 123

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le+i +e +r++++ + l+ + +g
CP000786_1 124 ----------KRKLEKIWKENQRIESQMGNAFYLASLMQG 153

CP000786_2285: domain 1 of 1, from 453 to 521: score 39.8, E = 5.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f++ +sH++R PL +I+ + lL e + + ls+e +
CP000786_2 453 LKDKFISIVSHDIRSPLFGISSVVNLLTE-------SPPSLSPERA- 491

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l + ++ +l+++++l +sr ++
CP000786_2 492 ----------KQVLGEASTGLKNILSMVEELIKYSRFQNA 521

CP000786_0077: domain 1 of 1, from 282 to 348: score 37.3, E = 2.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +a++ HE+++ LtaI+g++e++ + ++++ +
CP000786_0 282 FLSVVAASIGHEINNSLTAIQGFVEMASR---------ENADLMLK- 318

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l++ l+++e l++L ++lL+l +
CP000786_0 319 ----------DRALKVTLNQTEKLRALTSNLLQLGKSVKS 348

CP000786_2394: domain 1 of 1, from 405 to 477: score 37.0, E = 3.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+ +++H++++ Lt +++y++ L + ++++ + +++
CP000786_2 405 ALGTFAGGIAHDFNNLLTPMMAYISFLNA-------EWSKNESNDMI 444

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++e i ++++r +Li+++L++s+i++
CP000786_2 445 QKS-------LPAIEGISKSLDRAKNLIQQILTYSKIDHS 477

CP000786_1613: domain 1 of 1, from 370 to 442: score 36.4, E = 4.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a e + ++HE+++PLt I++ a+ +++++ + + + e +
CP000786_1 370 AWKEVAQRMAHEIKNPLTPIQLSAQRIQRKF----QNPKKENLESV- 411

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++eti+ +++ l++L+ ++ +++r+ +
CP000786_1 412 ---------IFDATETIIGQVRVLEHLVKEFSEFARMPVP 442

CP000786_3072: domain 1 of 1, from 460 to 528: score 35.4, E = 9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k f++ +sH+LR PL+++ ++++ + +e see++
CP000786_3 460 WKANFVSLISHDLRSPLNSVNQILDVIDFSF-------SETSEEEK- 498

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l++ + + + l+++++lLd sr +a
CP000786_3 499 ----------KKFLDICKTGVTQSLKMLEQLLDVSRFDAF 528

CP000786_2034: domain 1 of 1, from 239 to 281: score 35.0, E = 1.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HE+++P++aI++ ae L+e l+ ++els q
CP000786_2 239 SLGQLVAGIAHEINNPIAAIQASAENLKESLF-----ESELSVFQ-- 278

peLRledpeyrey<-*
+e+
CP000786_2 279 ----------KEL 281

CP000786_0633: domain 1 of 2, from 409 to 442: score 32.6, E = 5.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelse<-*
++++++a+++HE+++PL+aI++ +e+L e ++++e
CP000786_0 409 ELGKLVAGVAHEINNPLSAIKASIETLME---------SKQNE 442

CP000786_1893: domain 1 of 2, from 255 to 294: score 32.2, E = 7.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a+++HE+++PL+aI++++e L+++l
CP000786_1 255 TLGQLVASVAHEINNPLAAISAFSEQLQNRL---------------- 285

peLRledpeyreyletilr<-*
++ +++l+
CP000786_1 286 ----------GDFASRLLE 294

CP000786_3266: domain 1 of 1, from 179 to 247: score 32.0, E = 8.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f++ ++H+LR PL a + +++lL e++ ls+e+r
CP000786_3 179 TKDKFFSIIAHDLRGPLGAHKDFTKLLIERF-------VSLSDEER- 217

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i +++e l +L ++lL + ++g
CP000786_3 218 ----------EINLQIISESSEKLYSLMENLLHWASNQNG 247

CP000786_2553: domain 1 of 2, from 692 to 720: score 28.1, E = 1.1e-07
*->akseflanlsHELRTPLtaIrgyaelLle<-*
++++++a+++HE+++P+ aI++ ++l+le
CP000786_2 692 SLGQLIAGIAHEINNPMGAIQASSQLILE 720

CP000786_0841: domain 1 of 1, from 490 to 524: score 27.6, E = 1.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelsee<-*
+++ +a+++HE+++PL+aI+g ++ +++ + s++
CP000786_0 490 TLGKIAASVAHEINNPLAAIKGSIQFIKD---------GQFSDD 524


Histogram of all scores:
score obs exp (one = represents 12 sequences)
----- --- ---
-15 2 0|=
-14 16 0|==
-13 50 2|*====
-12 177 77|======*========
-11 366 401|=============================== *
-10 624 745|==================================================== *
-9 687 770|==========================================================*
-8 545 576|============================================== *
-7 353 363|==============================*
-6 233 209|=================*==
-5 129 114|=========*=
-4 78 61|=====*=
-3 34 32|==*
-2 22 17|=*
-1 10 8|*
0 8 4|*
1 3 2|*
2 1 1|*
3 1 0|=
4 1 0|=
> 5 51 -|=====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 172.4744
P(chi-square) = 3.651e-31

Total sequences searched: 3391

Whole sequence top hits:
tophits_s report:
Total hits: 34
Satisfying E cutoff: 34
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 34
Satisfying E cutoff: 34
Total memory: 34K


Acknowledgements:

This research is funded by:

Developed by: