Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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39 projects found  

6 accessions found for Cyanothece sp. ATCC 51142  

Data for CP000806  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000806.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000806_1184 CDS_1190012-1185963 110.0 9e-31 2
CP000806_1136 CDS_1138024-1134770 100.2 5.5e-28 1
CP000806_4285 CDS_4417066-4414472 99.0 1.2e-27 1
CP000806_0887 CDS_892387-894423 93.5 4.3e-26 1
CP000806_0655 CDS_662844-665570 93.3 5e-26 1
CP000806_3719 CDS_3859671-3856423 93.2 5.3e-26 1
CP000806_0164 CDS_152388-153749 91.8 1.3e-25 1
CP000806_4575 CDS_4727925-4724338 90.9 2.4e-25 1
CP000806_1465 CDS_1478000-1479709 88.7 9.8e-25 1
CP000806_1775 CDS_1791231-1793738 88.7 1e-24 1
CP000806_2230 CDS_2274517-2270018 85.9 6.2e-24 1
CP000806_1735 CDS_1755733-1757163 82.6 5.4e-23 1
CP000806_2504 CDS_2562504-2563760 81.9 8.2e-23 1
CP000806_2373 CDS_2429311-2431857 81.9 8.7e-23 1
CP000806_3554 CDS_3686360-3681318 81.2 1.3e-22 1
CP000806_4747 CDS_4917870-4915573 78.3 8.7e-22 1
CP000806_4422 CDS_4567717-4569045 77.7 1.3e-21 1
CP000806_0219 CDS_208137-210644 73.7 1.8e-20 1
CP000806_1411 CDS_1423597-1419644 70.2 1.8e-19 1
CP000806_0296 CDS_292842-290770 70.1 1.8e-19 1
CP000806_0968 CDS_971346-970030 64.6 6.9e-18 1
CP000806_4401 CDS_4546845-4545649 64.3 8.3e-18 1
CP000806_2542 CDS_2609460-2610554 63.7 1.2e-17 1
CP000806_1183 CDS_1186078-1183526 61.1 6.6e-17 2
CP000806_3516 CDS_3647891-3646599 60.7 8.8e-17 1
CP000806_3933 CDS_4069705-4072269 59.1 2.4e-16 1
CP000806_3375 CDS_3478504-3479772 58.2 4.4e-16 1
CP000806_0016 CDS_12308-13660 56.3 1.5e-15 1
CP000806_1692 CDS_1712659-1711289 54.4 5.4e-15 1
CP000806_1278 CDS_1283929-1285476 53.8 7.5e-15 1
CP000806_1981 CDS_2015049-2012767 50.2 8.4e-14 1
CP000806_3890 CDS_4028596-4029669 49.0 1.8e-13 1
CP000806_4200 CDS_4336680-4337474 44.7 2.9e-12 1
CP000806_1749 CDS_1768155-1767007 42.1 1.7e-11 1
CP000806_3709 CDS_3844646-3846904 41.6 2.2e-11 1
CP000806_1517 CDS_1529129-1525218 36.0 8.5e-10 1
CP000806_2505 CDS_2563760-2564821 36.0 8.6e-10 1
CP000806_3323 CDS_3434570-3433278 33.3 5e-09 1
CP000806_0256 CDS_249519-250979 29.7 5.1e-08 1
CP000806_2364 CDS_2419326-2421560 28.0 1.6e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000806_1136 1/1 617 683 .. 1 87 [] 100.2 5.5e-28
CP000806_4285 1/1 406 472 .. 1 87 [] 99.0 1.2e-27
CP000806_0887 1/1 417 485 .. 1 87 [] 93.5 4.3e-26
CP000806_0655 1/1 264 329 .. 1 87 [] 93.3 5e-26
CP000806_3719 1/1 601 667 .. 1 87 [] 93.2 5.3e-26
CP000806_0164 1/1 211 279 .. 1 87 [] 91.8 1.3e-25
CP000806_4575 1/1 714 779 .. 1 87 [] 90.9 2.4e-25
CP000806_1465 1/1 321 388 .. 1 87 [] 88.7 9.8e-25
CP000806_1775 1/1 347 414 .. 1 87 [] 88.7 1e-24
CP000806_2230 1/1 1123 1188 .. 1 87 [] 85.9 6.2e-24
CP000806_1735 1/1 256 323 .. 1 87 [] 82.6 5.4e-23
CP000806_2504 1/1 188 256 .. 1 87 [] 81.9 8.2e-23
CP000806_2373 1/1 381 447 .. 1 87 [] 81.9 8.7e-23
CP000806_3554 1/1 1444 1512 .. 1 87 [] 81.2 1.3e-22
CP000806_4747 1/1 389 460 .. 1 87 [] 78.3 8.7e-22
CP000806_4422 1/1 197 264 .. 1 87 [] 77.7 1.3e-21
CP000806_0219 1/1 335 403 .. 1 87 [] 73.7 1.8e-20
CP000806_1411 1/1 1076 1158 .. 1 87 [] 70.2 1.8e-19
CP000806_0296 1/1 434 501 .. 1 87 [] 70.1 1.8e-19
CP000806_0968 1/1 212 279 .. 1 87 [] 64.6 6.9e-18
CP000806_4401 1/1 162 230 .. 1 87 [] 64.3 8.3e-18
CP000806_2542 1/1 144 208 .. 1 87 [] 63.7 1.2e-17
CP000806_1184 1/2 669 738 .. 1 87 [] 61.0 7e-17
CP000806_3516 1/1 198 262 .. 1 87 [] 60.7 8.8e-17
CP000806_1183 2/2 484 550 .. 1 87 [] 59.6 1.7e-16
CP000806_3933 1/1 385 451 .. 1 87 [] 59.1 2.4e-16
CP000806_3375 1/1 195 262 .. 1 87 [] 58.2 4.4e-16
CP000806_0016 1/1 225 292 .. 1 87 [] 56.3 1.5e-15
CP000806_1692 1/1 223 290 .. 1 87 [] 54.4 5.4e-15
CP000806_1278 1/1 237 305 .. 1 87 [] 53.8 7.5e-15
CP000806_1981 1/1 529 597 .. 1 87 [] 50.2 8.4e-14
CP000806_3890 1/1 130 198 .. 1 87 [] 49.0 1.8e-13
CP000806_1184 2/2 1115 1183 .. 1 87 [] 49.0 1.8e-13
CP000806_4200 1/1 27 94 .. 1 87 [] 44.7 2.9e-12
CP000806_1749 1/1 153 225 .. 1 87 [] 42.1 1.7e-11
CP000806_3709 1/1 516 584 .. 1 87 [] 41.6 2.2e-11
CP000806_1517 1/1 1080 1151 .. 1 87 [] 36.0 8.5e-10
CP000806_2505 1/1 127 195 .. 1 87 [] 36.0 8.6e-10
CP000806_3323 1/1 175 238 .. 1 87 [] 33.3 5e-09
CP000806_0256 1/1 266 329 .. 1 87 [] 29.7 5.1e-08
CP000806_2364 1/1 514 581 .. 1 87 [] 28.0 1.6e-07

Alignments of top-scoring domains:
CP000806_1136: domain 1 of 1, from 617 to 683: score 100.2, E = 5.5e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL+aI+g+++lL + d++l+eeq
CP000806_1 617 AKSDFLAHMSHELRTPLNAILGFSQLLNN--------DENLDEEQ-- 653

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+++i +++e+ll Li +Ld+++ieag
CP000806_1 654 ----------KEYIDIINQSGEHLLTLIKSVLDMAKIEAG 683

CP000806_4285: domain 1 of 1, from 406 to 472: score 99.0, E = 1.2e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHELRTPL+aI+gy++l+l+ +t ls+++
CP000806_4 406 AKSEFLASMSHELRTPLNAILGYVQLMLR--------STSLSSDH-- 442

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l+ti +++e+ll Lind+L++s+ieag
CP000806_4 443 ----------RNNLQTINDSGEHLLGLINDVLEMSKIEAG 472

CP000806_0887: domain 1 of 1, from 417 to 485: score 93.5, E = 4.3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f++n+sHELRTPL I+ ++e+L e++ ++l+e +r
CP000806_0 417 AKSQFISNVSHELRTPLFNIKSFIETLSEFG-------EDLTETER- 455

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+let+ +e++rl rL+nd+Ldlsr+e+
CP000806_0 456 ----------KEFLETANHETDRLTRLVNDVLDLSRLESS 485

CP000806_0655: domain 1 of 1, from 264 to 329: score 93.3, E = 5e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++ HE+RTPL+a+ g++ lLl+ tel+++q
CP000806_0 264 AKSEFLAMIGHEIRTPLNAVTGMTGLLLD---------TELNDQQ-- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++++i++++e ll +in++Ld+s+iea+
CP000806_0 300 ----------QEFVSIIRNSGENLLTMINNILDFSKIEAQ 329

CP000806_3719: domain 1 of 1, from 601 to 667: score 93.2, E = 5.3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHELRTPL+aI+g+++++++ d+ l e+
CP000806_3 601 AKSEFLASMSHELRTPLNAILGFTQVMQR--------DHSLKGEH-- 637

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l++i r++e+ll+Lind+L++++ieag
CP000806_3 638 ----------RQNLDIIGRSGEHLLELINDILEMTKIEAG 667

CP000806_0164: domain 1 of 1, from 211 to 279: score 91.8, E = 1.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+ ++++sHELRTPL++I+g++++L+ee + ++l+e+q
CP000806_0 211 NKSDYFSHVSHELRTPLAGILGFSKMLREEIY------GTLNEKQ-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++ i+ ++e+ll+L+nd+Ldls+iea+
CP000806_0 250 ----------KQYVNGIRVSGEHLLALVNDFLDLSKIEAN 279

CP000806_4575: domain 1 of 1, from 714 to 779: score 90.9, E = 2.4e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP++aI+g+++lL + +e
CP000806_4 714 AKSEFLANMSHEIRTPMNAILGFCDLLDK---------RITDERS-- 749

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yle++ + ++ ll+Lind+Ldls+ie+g
CP000806_4 750 ----------RHYLESVASGGKMLLSLINDILDLSKIESG 779

CP000806_1465: domain 1 of 1, from 321 to 388: score 88.7, E = 9.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fla+ HELRTPL++I+g+++l+l+++ ++ eq
CP000806_1 321 LKSDFLASTTHELRTPLNGIIGFLKLILDGM-------ADDAQEQ-- 358

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le ++++a +ll+Lind+Ld+++ieag
CP000806_1 359 ----------QEFLEEAHKSALHLLNLINDILDIAKIEAG 388

CP000806_1775: domain 1 of 1, from 347 to 414: score 88.7, E = 1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+eflan+sHELRTP++aI+g+aelL+ +l ++ e+ +
CP000806_1 347 AKTEFLANVSHELRTPMNAILGFAELLKLKL--------KAQEPPI- 384

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey+eti++++++ll+LindlLd+ + eag
CP000806_1 385 ----------YEYIETIYNSSNSLLSLINDLLDINQVEAG 414

CP000806_2230: domain 1 of 1, from 1123 to 1188: score 85.9, E = 6.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP+++I++ ++lL+ t+l+ +q
CP000806_2 1123 AKSEFLANMSHEIRTPINSIMLVSQLLEG---------TNLDTQQ-- 1158

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+t+ + +++ll+Lin +L ls++e+
CP000806_2 1159 ----------KKLLQTLNNNSNHLLNLINKILSLSKLESR 1188

CP000806_1735: domain 1 of 1, from 256 to 323: score 82.6, E = 5.4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++n+sHELRTPLt+++gy++ l+++ +l++ q
CP000806_1 256 NQRQLVSNVSHELRTPLTVVSGYLQSTLRRG-------NNLTDMQ-- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+let+ +ea+r +L++dlLdl+r+e+g
CP000806_1 294 ----------REALETASSEADRTVQLLQDLLDLARAEHG 323

CP000806_2504: domain 1 of 1, from 188 to 256: score 81.9, E = 8.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+fla++sHELRTP++aI+g+++lLl+++ ++l+++q+
CP000806_2 188 RQSQFLATISHELRTPMNAIMGFSQLLLRQY------PDPLTDQQI- 227

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++i + ++ ll Lin++Ld+s++e g
CP000806_2 228 -----------DIIQRIFNNSQNLLTLINEVLDFSKLEIG 256

CP000806_2373: domain 1 of 1, from 381 to 447: score 81.9, E = 8.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efl n+ HELRTPL+ I+gy++ L +++ l+ eq
CP000806_2 381 AKREFLGNINHELRTPLNLIIGYIDRLYQDGY--------LNNEQ-- 417

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++i+r +++ll+Lin++Ld+s+ie+g
CP000806_2 418 ----------KKQLDIIDRNSQHLLSLINQILDISKIESG 447

CP000806_3554: domain 1 of 1, from 1444 to 1512: score 81.2, E = 1.3e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++ +sHELRTPLt++rg++ lL +++ +e++
CP000806_3 1444 LKTEFISVVSHELRTPLTSMRGALGLLNAGV-------LQEEPETV- 1482

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+++lr +rl rL+nd+Ldl+r+e+g
CP000806_3 1483 ----------EHMLKIVLRNCDRLIRLVNDILDLERLESG 1512

CP000806_4747: domain 1 of 1, from 389 to 460: score 78.3, E = 8.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ksefl n+sHELRTPLt I+g++ +Ll ++ +++t+l+ +++
CP000806_4 389 SKSEFLGNMSHELRTPLTCIIGLSGTLLHWS----QESTTLPLDKQ- 430

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ti++++++ll++in++L++s +++g
CP000806_4 431 ----------QKYLQTIQNSGKHLLDMINEILEYSNLQSG 460

CP000806_4422: domain 1 of 1, from 197 to 264: score 77.7, E = 1.3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELR+P+++I+++++++l+++ + + q
CP000806_4 197 SLKQFTADASHELRNPIATIQTNVQMALAYG-------NTDPQVQ-- 234

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++++r ++rl +L+ndlL l+r ++g
CP000806_4 235 ----------QRQLKVVERLTKRLGNLVNDLLFLARSDSG 264

CP000806_0219: domain 1 of 1, from 335 to 403: score 73.7, E = 1.8e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla +sHEL+ PLta+ g+++lL+e + ++l++ q
CP000806_0 335 LKDEFLACISHELKSPLTAVVGLSSLLQE------EKIGDLNPRQ-- 373

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y + i+r++++l L+ndlLdl+r+e+g
CP000806_0 374 ----------VHYAQLIYRSGRQLMTLVNDLLDLTRLETG 403

CP000806_1411: domain 1 of 1, from 1076 to 1158: score 70.2, E = 1.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldk.........v.lag
+k+ fl+++sHELRTPLt+I g+++l+++ k + ++ ++ +
CP000806_1 1076 MKRNFLSMVSHELRTPLTSIVGFSSLIRD---KlhavvfpqiQeKDK 1119

dtelseeqrlpeLRledpeyreyletilreaerllrLindlLdlsrieag
++ e + ++ l+++ eaerl +L+nd+Ld+++ie+g
CP000806_1 1120 KVDKAVERI-----------KQNLDIVVFEAERLTKLVNDFLDMTKIESG 1158

<-*

CP000806_1 - -

CP000806_0296: domain 1 of 1, from 434 to 501: score 70.1, E = 1.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s ++a HELRTPL++I+ +e L ++++s+e r
CP000806_0 434 TRSNLVAITGHELRTPLSTIQVCLESLAS--------EPDMSPELR- 471

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+t+l++aer+++L++d+L+ls++e+g
CP000806_0 472 ----------QVMLNTALQDAERMRKLVQDFLTLSQLESG 501

CP000806_0968: domain 1 of 1, from 212 to 279: score 64.6, E = 6.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELR PLtaI++ + lL+ + + +e++
CP000806_0 212 QLKQFTADASHELRSPLTAIKTSVTLLKS-------HPERFQSEDI- 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++il++++++++L++dlL l+r++
CP000806_0 251 -----------PKLDIILSATDQMSHLVEDLLLLARMDGK 279

CP000806_4401: domain 1 of 1, from 162 to 230: score 64.3, E = 8.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksef++ lsH++R+PL++I++ a lL++ + + l+ +q+
CP000806_4 162 LKSEFVSILSHDFRNPLNTILLSAGLLED-------SHDQLTRDQQ- 200

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++ i+++++ +++L++++L l +++ag
CP000806_4 201 ----------LSYFQMIRQAVQDMNQLLSEVLLLGKADAG 230

CP000806_2542: domain 1 of 1, from 144 to 208: score 63.7, E = 1.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e+++++ HELRTPLt++rgy+e L + +
CP000806_2 144 RRRELISDMTHELRTPLTVMRGYLEELAN---------GSIEGNP-- 179

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +e++rl+rLi d+ +ls++eag
CP000806_2 180 -----------DLYLNLVKETRRLERLIHDMQELSKAEAG 208

CP000806_1184: domain 1 of 2, from 669 to 738: score 61.0, E = 7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ f+ n+sHE+RTPLt ++g +e + ++l+ ++e++e
CP000806_1 669 TKTVFFNNVSHEFRTPLTLLLGPLEDAITQLE-----SQEKPETV-- 708

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+ ++r a rll+L+n lLd+sr ea+
CP000806_1 709 ----------KEHLQLAHRNALRLLKLVNTLLDFSRVEAQ 738

CP000806_3516: domain 1 of 1, from 198 to 262: score 60.7, E = 8.8e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ l++l HELRTPLt+I++ +e L+ l +++
CP000806_3 198 SRDRALSDLTHELRTPLTSISLVSEWLEG----------RLQDPE-- 232

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +l+e++rl +L++d L+ls+++++
CP000806_3 233 ----------RRRATQMLQETHRLINLVEDWLELSQLQEN 262

CP000806_1183: domain 2 of 2, from 484 to 550: score 59.6, E = 1.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla lsHELR PL+ I+g + lL+++++ ++ + ++
CP000806_1 484 IKDEFLAILSHELRSPLNPILGWSTLLQTKQF------DPITTKKG- 523

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ti+r a+ +Li+dlLd++ri g
CP000806_1 524 -------------LSTIERNAKLQTQLIDDLLDIARILRG 550

CP000806_3933: domain 1 of 1, from 385 to 451: score 59.1, E = 2.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++ l + HELR PL+ ++g+++lL ++ l+e++
CP000806_3 385 EKNQILDKINHELRIPLNNVLGFLDLLGS--------EHSLTEKK-- 421

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i++ +++llrL n++L++s+ +g
CP000806_3 422 ----------DNSLQIIQENSQYLLRLFNQILEFSKVTSG 451

CP000806_3375: domain 1 of 1, from 195 to 262: score 58.2, E = 4.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHELR PLtaI++ ++++++ + + e++
CP000806_3 195 KQQQFTADASHELRGPLTAIKASIDIMRR-------HPERFQEKD-- 232

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i +++ ++ rL++dlL l+r e
CP000806_3 233 ----------VRKVGAIANATAQMTRLVEDLLFLARTEKK 262

CP000806_0016: domain 1 of 1, from 225 to 292: score 56.3, E = 1.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an++HELR PL+++++++e++l+ ++ ++++
CP000806_0 225 QQQQFTANAAHELRSPLASLLATIEAILR--------IPPSQPQDL- 262

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+t++r+++rl+ L+ dlL l+ +e +
CP000806_0 263 ----------NKMLHTLERQGRRLSYLVTDLLLLTSLEGQ 292

CP000806_1692: domain 1 of 1, from 223 to 290: score 54.4, E = 5.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HELRTPL+aI++++e l+ + l+e +
CP000806_1 223 QIQQFTADAAHELRTPLAAILATIESTLM--------ISFLTENES- 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r let+ r+++rl+rL+ dlL lsr++ +
CP000806_1 261 ----------RNTLETLGRQTQRLSRLVADLLMLSRLDWQ 290

CP000806_1278: domain 1 of 1, from 237 to 305: score 53.8, E = 7.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k ++l+ l E+RTPLt+++g++++L+ +++ + l+ +q
CP000806_1 237 IKLQLLRQLMEEFRTPLTSVIGMSSVLQGGVF------GSLTTKQ-- 275

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl++i+++++++++L+ ++L+l
CP000806_1 276 ----------KEYLKIIHSSGQQMNALVKEILTLGISHDI 305

CP000806_1981: domain 1 of 1, from 529 to 597: score 50.2, E = 8.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ +sH+L PL+ ++ y++lL++++d ++l+e+
CP000806_1 529 ELKKFAYVASHDLQEPLNQVSNYVQLLEMRYD------EALDEDA-- 567

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ + + + ++ Li+d+L +s+ +
CP000806_1 568 ----------KEFINFAVEGVSLMQTLIDDVLAYSKVDMR 597

CP000806_3890: domain 1 of 1, from 130 to 198: score 49.0, E = 1.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+++l H+L+TPL + + +++ + +l+ + +++q
CP000806_3 130 IREDFVSTLTHDLKTPLLGAIETLKSFQLGLF------GQVTPKQ-- 168

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le ++++ ++ l+L++ +Ld+ r +++
CP000806_3 169 ----------QKILEMMRHSHQSTLQLVETVLDIYRNDNE 198

CP000806_1184: domain 2 of 2, from 1115 to 1183: score 49.0, E = 1.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+L TPL I+ ++e L ++l+ +++++ +
CP000806_1 1115 ELEAFSYSVSHDLQTPLRYISSFVERLHRKLE------GNADAST-- 1153

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl++i+++a + ++i+dlL++sr
CP000806_1 1154 ----------LRYLSIIDQAASQAHQMIDDLLEFSRSSKT 1183

CP000806_4200: domain 1 of 1, from 27 to 94: score 44.7, E = 2.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks la +HELR PL++++g+ +l+l +l e + e+
CP000806_4 27 FKSSYLAKTAHELRSPLSSLMGLHQLILGNL-------CEDPQEE-- 64

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+ ++a+ l ++i+++ ++s+i+ g
CP000806_4 65 ----------KEFLQQGFEAAKKLVEIIDRIVTISKIDCG 94

CP000806_1749: domain 1 of 1, from 153 to 225: score 42.1, E = 1.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++ la+l+H+LR PLta + ++e+L+ a+ ++ +e+q+
CP000806_1 153 FKDQVLAMLAHDLRSPLTAASIAVETLEL------AKNQDPTEKQQK 193

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ +++ + ++rLi d+L+ s+ +
CP000806_1 194 LT--------AQLFNQTRNQFRVMNRLITDILQASKSMNA 225

CP000806_3709: domain 1 of 1, from 516 to 584: score 41.6, E = 2.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ +sH+L+ PL +I ya Lle++ ++ l++
CP000806_3 516 DLDAFAYIASHDLKEPLRGIYNYANFLLEDY------SDRLDDNG-- 554

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
let+ r ++ + +L++ lL++sr++
CP000806_3 555 ----------VYQLETLVRLSKKMGDLLDSLLEYSRLGRV 584

CP000806_1517: domain 1 of 1, from 1080 to 1151: score 36.0, E = 8.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL I g++ +L+ +l + ++++
CP000806_1 1080 ELDSFCYSVSHDLRAPLRHIHGFVNALKQRL-------VDTDAKE-- 1117

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
dp + yle+i++++e + +Li+ lL+lsr +
CP000806_1 1118 ------DPKVIHYLEVIEKSSEKMGHLIDGLLTLSRVGRR 1151

CP000806_2505: domain 1 of 1, from 127 to 195: score 36.0, E = 8.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ l H+LRTPL a +++l+ +++ +e + ++
CP000806_2 127 QREHFVHCLTHDLRTPLVAADRMLSLITQGVF------GEITLKT-- 165

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ i+r+ + ll++in lLd e+g
CP000806_2 166 ----------KDALNNIIRSNQNLLEMINKLLDVHSYEEG 195

CP000806_3323: domain 1 of 1, from 175 to 238: score 33.3, E = 5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++ l +l H+LR+PLta++ + +lLl+ +++q
CP000806_3 175 QERDRLDDLFHQLRNPLTALKVFGKLLLK---------RLGTDDQS- 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++ i re+e+l++Li ++ + + g
CP000806_3 212 ----------RSIVNNIVREGEHLQELIKEF---ESHQKG 238

CP000806_0256: domain 1 of 1, from 266 to 329: score 29.7, E = 5.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+l +lsHE+RTPLt+Ir+++ lLl++ el+++
CP000806_0 266 TDVALLQALSHEIRTPLTSIRTMTRLLLRN--------KELDPKM-- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++ + ++++in++ + r+ +
CP000806_0 303 -------------IRLLENIDQECSEQINRMELIFRATEL 329

CP000806_2364: domain 1 of 1, from 514 to 581: score 28.0, E = 1.6e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k fl ++sH+LRT + +++++++ L++ + ++ ++
CP000806_2 514 MKAVFLQAVSHDLRTSIMGLLMLLKNLQN---------RPGDSLTLS 551

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+++++++er l Lin l + e+
CP000806_2 552 ----------RSILDRMINSSERQLTLINALSEDHFSEQR 581


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-15 4 0|=
-14 69 0|=====
-13 135 3|*=========
-12 327 108|=======*================
-11 568 564|========================================*
-10 791 1047|========================================================= *
-9 807 1081|==========================================================*
-8 687 809|================================================== *
-7 480 510|=================================== *
-6 341 293|====================*====
-5 195 161|===========*==
-4 134 86|======*===
-3 78 45|===*==
-2 42 23|=*=
-1 27 12|*=
0 13 6|*
1 10 3|*
2 3 1|*
3 4 0|=
> 4 47 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 691.4461
P(chi-square) = 0

Total sequences searched: 4762

Whole sequence top hits:
tophits_s report:
Total hits: 40
Satisfying E cutoff: 40
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 41
Satisfying E cutoff: 41
Total memory: 37K


Acknowledgements:

This research is funded by:

Developed by: