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Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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35 projects found  

1 accessions found for Desulfococcus oleovorans Hxd3  

Data for CP000859  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000859.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000859_0981 CDS_1150791-1145416 103.0 6.2e-29 1
CP000859_1090 CDS_1298589-1293424 102.7 7.2e-29 1
CP000859_3263 CDS_3937925-3939622 89.9 3.2e-25 1
CP000859_1925 CDS_2331844-2333619 74.4 8e-21 1
CP000859_1644 CDS_1962030-1960192 69.5 1.9e-19 1
CP000859_1770 CDS_2140694-2142253 66.8 1.1e-18 1
CP000859_2805 CDS_3394458-3392971 65.8 2.1e-18 1
CP000859_0888 CDS_1040190-1038247 65.1 3.4e-18 1
CP000859_2841 CDS_3432967-3431522 64.4 5.4e-18 1
CP000859_0426 CDS_490723-492519 61.4 3.6e-17 1
CP000859_2386 CDS_2883539-2882031 58.2 3.1e-16 1
CP000859_2804 CDS_3392981-3391485 57.8 3.9e-16 1
CP000859_2121 CDS_2584131-2582680 57.8 4e-16 1
CP000859_0623 CDS_742507-741536 57.4 5e-16 1
CP000859_2801 CDS_3389642-3387855 55.5 1.8e-15 1
CP000859_1359 CDS_1625243-1623753 52.1 1.6e-14 1
CP000859_3256 CDS_3921053-3919134 50.8 3.8e-14 1
CP000859_1540 CDS_1842305-1840668 47.1 4.1e-13 1
CP000859_3257 CDS_3921262-3924666 44.9 1.8e-12 1
CP000859_2693 CDS_3253775-3257083 42.9 6.4e-12 2
CP000859_3260 CDS_3930742-3934284 42.3 9.6e-12 1
CP000859_3258 CDS_3924682-3928002 41.6 1.6e-11 1
CP000859_2731 CDS_3305237-3307486 40.6 2.9e-11 1
CP000859_3261 CDS_3934266-3937505 40.4 3.4e-11 1
CP000859_0867 CDS_1014980-1017697 39.6 5.5e-11 1
CP000859_3265 CDS_3940172-3943060 39.5 6.1e-11 2
CP000859_1514 CDS_1815467-1813134 39.2 7.2e-11 1
CP000859_1998 CDS_2426708-2428612 36.5 4.3e-10 1
CP000859_3216 CDS_3864162-3862378 36.1 5.5e-10 1
CP000859_2328 CDS_2818134-2816371 35.1 1e-09 1
CP000859_1350 CDS_1615010-1616785 33.9 2.3e-09 1
CP000859_1314 CDS_1573897-1572524 31.9 8.6e-09 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000859_0981 1/1 1418 1483 .. 1 87 [] 103.0 6.2e-29
CP000859_1090 1/1 1280 1345 .. 1 87 [] 102.7 7.2e-29
CP000859_3263 1/1 336 404 .. 1 87 [] 89.9 3.2e-25
CP000859_1925 1/1 364 432 .. 1 87 [] 74.4 8e-21
CP000859_1644 1/1 385 451 .. 1 87 [] 69.5 1.9e-19
CP000859_1770 1/1 282 348 .. 1 87 [] 66.8 1.1e-18
CP000859_2805 1/1 268 334 .. 1 87 [] 65.8 2.1e-18
CP000859_0888 1/1 419 485 .. 1 87 [] 65.1 3.4e-18
CP000859_2841 1/1 251 318 .. 1 87 [] 64.4 5.4e-18
CP000859_0426 1/1 377 443 .. 1 87 [] 61.4 3.6e-17
CP000859_2386 1/1 274 342 .. 1 87 [] 58.2 3.1e-16
CP000859_2804 1/1 268 337 .. 1 87 [] 57.8 3.9e-16
CP000859_2121 1/1 258 324 .. 1 87 [] 57.8 4e-16
CP000859_0623 1/1 92 158 .. 1 87 [] 57.4 5e-16
CP000859_2801 1/1 381 447 .. 1 87 [] 55.5 1.8e-15
CP000859_1359 1/1 272 338 .. 1 87 [] 52.1 1.6e-14
CP000859_3256 1/1 268 334 .. 1 87 [] 50.8 3.8e-14
CP000859_1540 1/1 37 96 .. 7 87 .] 47.1 4.1e-13
CP000859_3257 1/1 765 831 .. 1 87 [] 44.9 1.8e-12
CP000859_3260 1/1 728 794 .. 1 87 [] 42.3 9.6e-12
CP000859_2693 2/2 728 794 .. 1 87 [] 41.9 1.3e-11
CP000859_3258 1/1 737 803 .. 1 87 [] 41.6 1.6e-11
CP000859_2731 1/1 534 603 .. 1 87 [] 40.6 2.9e-11
CP000859_3261 1/1 708 774 .. 1 87 [] 40.4 3.4e-11
CP000859_0867 1/1 540 609 .. 1 87 [] 39.6 5.5e-11
CP000859_1514 1/1 397 463 .. 1 87 [] 39.2 7.2e-11
CP000859_1998 1/1 330 385 .. 1 74 [. 36.5 4.3e-10
CP000859_3265 1/2 593 659 .. 1 87 [] 36.2 5.2e-10
CP000859_3216 1/1 226 292 .. 1 87 [] 36.1 5.5e-10
CP000859_2328 1/1 355 427 .. 1 87 [] 35.1 1e-09
CP000859_1350 1/1 359 433 .. 1 87 [] 33.9 2.3e-09
CP000859_1314 1/1 234 290 .. 1 78 [. 31.9 8.6e-09

Alignments of top-scoring domains:
CP000859_0981: domain 1 of 1, from 1418 to 1483: score 103.0, E = 6.2e-29
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP+++++g+++lLl+ t+l+eeq
CP000859_0 1418 AKSEFLANMSHEIRTPMNGVIGMTDLLLD---------TDLTEEQ-- 1453

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey e+++++ae+ll +ind+Ld+s+ieag
CP000859_0 1454 ----------LEYAESVRSSAESLLVIINDVLDFSKIEAG 1483

CP000859_1090: domain 1 of 1, from 1280 to 1345: score 102.7, E = 7.2e-29
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP+++I+g+++lLle tel+ eq
CP000859_1 1280 AKSEFLANMSHEIRTPMNGILGMTSLLLE---------TELTGEQ-- 1315

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ e++++ ++ ll++ind+Ld+s+ieag
CP000859_1 1316 ----------RRFAEIVRNNGDALLEIINDILDFSKIEAG 1345

CP000859_3263: domain 1 of 1, from 336 to 404: score 89.9, E = 3.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fla++sHELRTPL++I+g++ +Ll el ++l+eeq
CP000859_3 336 LKSAFLATMSHELRTPLNSIIGFTGMLLQEL------PGPLNEEQ-- 374

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ +a++ll+Lind+Ld+s+ieag
CP000859_3 375 ----------KKQMGMVQTSARHLLALINDVLDISKIEAG 404

CP000859_1925: domain 1 of 1, from 364 to 432: score 74.4, E = 8e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHEL+TPLt+I+g++e+Ll+ ++ l + +
CP000859_1 364 MRKDFAANVSHELKTPLTSIQGFTETLLA--------EPSLLDNAH- 401

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + le+i + ++rl +i+dlL ls ie+
CP000859_1 402 ---------VVRCLEIIANNTKRLTTIIDDLLKLSEIEHA 432

CP000859_1644: domain 1 of 1, from 385 to 451: score 69.5, E = 1.9e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++++ a+++HE+RTPLt++++++e ++ + ls+e+
CP000859_1 385 AMGRMGAAVAHEIRTPLTSLKLFLESVQD--------LARLSAED-- 421

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++++ ++++r++ in++Ld++r +++
CP000859_1 422 ----------QEDFRIAMEQIQRMEGTINRFLDFARPREP 451

CP000859_1770: domain 1 of 1, from 282 to 348: score 66.8, E = 1.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+ +P+ ++gy+e+L + ++ls+ +r
CP000859_1 282 SVGRLAAGIAHEIGNPVGIVLGYLEMLND---------PALSPADR- 318

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl++ + e++r++ i++lLd+sr +
CP000859_1 319 ----------QDYLKRCEAEINRINTTIRELLDFSRPAGE 348

CP000859_2805: domain 1 of 1, from 268 to 334: score 65.8, E = 2.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++H+L++PL +I++ya+lLle++ +ls e
CP000859_2 268 SLGKLAAGVAHQLNNPLGGIMLYAKLLLEDY--------DLSREV-- 304

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +++ilr+a+r ++++++lL+++r +
CP000859_2 305 ----------TEDIHRILRDAQRSSDIVRELLEFARQTRQ 334

CP000859_0888: domain 1 of 1, from 419 to 485: score 65.1, E = 3.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+++PLt++++y+++Ll+ + +l ++
CP000859_0 419 SVGRLAAGVAHEINNPLTGVLTYTHMLLR--------RNDLADDV-- 455

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l +i +++er ++++ lLd+sr
CP000859_0 456 ----------RSDLTVIVESTERVRKIVKGLLDFSRQTRL 485

CP000859_2841: domain 1 of 1, from 251 to 318: score 64.4, E = 5.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++a+l+HE+++PL+a+ g++e+L el t +++
CP000859_2 251 AIGEMAAGLAHEIKNPLAALTGAIEMLNSEL-------TFFDPDG-- 288

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +++re++rl+ L+ ++L ++r + g
CP000859_2 289 ----------ARLMGIVKRETKRLNTLVTNFLLFARPQRG 318

CP000859_0426: domain 1 of 1, from 377 to 443: score 61.4, E = 3.6e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++a+++HE+R+PL++I+g a+ + ++ e ++e+
CP000859_0 377 AIGELAAGVAHEIRNPLSSIKGIASYYKSKF--------EDGSED-- 413

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ ++++e++rl+r i++lL+++r
CP000859_0 414 ----------KEMAGVMIEEVDRLSRVISELLEFARPTKL 443

CP000859_2386: domain 1 of 1, from 274 to 342: score 58.2, E = 3.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++a+++HEL++PL+ +++a++L e++ ++ls++++
CP000859_2 274 AIGTLVAGVAHELNNPLNNTLLTASMLTEDF-------ATLSDQEK- 312

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +++e+er +r + +lLd++r ++
CP000859_2 313 ----------LDMVNDVISETERARRVVKNLLDFAREGET 342

CP000859_2804: domain 1 of 1, from 268 to 337: score 57.8, E = 3.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksef+a +sHELR PL++I + + l+++ +++ + e+
CP000859_2 268 LKSEFVAKVSHELRSPLSTIHEQLGAVLRDMA-----EENDDNED-- 307

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+++++ + l +Li dlLdlsrie+g
CP000859_2 308 ----------QYILSRAKEKTGGLIALIGDLLDLSRIESG 337

CP000859_2121: domain 1 of 1, from 258 to 324: score 57.8, E = 4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ a+++HE+ TPL++I+g + +++ ++l+ +++
CP000859_2 258 TLGRLSAGMAHEIGTPLNVISGRSRMIRS---------GDLDRDEV- 294

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +i+++a+r+ ++ + lLd++r + +
CP000859_2 295 ----------VAFSAIIEEQAQRITKIMQGLLDFARRRKP 324

CP000859_0623: domain 1 of 1, from 92 to 158: score 57.4, E = 5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ n HEL+TP+t++r+++ + l+ ++l+ e++
CP000859_0 92 LQRNFINNFTHELKTPVTSLRLFLATFLK---------HDLPREEQ- 128

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++t++++++rl++ i +Ldl+ ie
CP000859_0 129 ----------VKHIQTMISDVNRLESTIGSILDLAEIEGR 158

CP000859_2801: domain 1 of 1, from 381 to 447: score 55.5, E = 1.8e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++a+++HE+R+PL++I+g+a +e++ s+++
CP000859_2 381 AIGKLAAGVAHEIRNPLSSIKGFATYFKEKF--------SDSDQD-- 417

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +t++ e+erl+r + +lL+++r +
CP000859_2 418 ----------KKTADTMIYEVERLNRAVTQLLEFARPVSL 447

CP000859_1359: domain 1 of 1, from 272 to 338: score 52.1, E = 1.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++ ++H +R+P+t+I + + L+++l ls+ q
CP000859_1 272 LVGRLASVVAHSIRNPMTSINMRLFSLQRNL--------SLSSSQ-- 308

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+++ +e +rl+++++++L++sr
CP000859_1 309 ----------KEDLDVVADEMRRLDNIVRNFLEFSRPHKL 338

CP000859_3256: domain 1 of 1, from 268 to 334: score 50.8, E = 3.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++++++H++++ Lt+I+g+a+ +l+ + ++e+++
CP000859_3 268 SIGRLASGIAHDFNNLLTTIIGNADFALM---------DLKPEDDL- 304

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ i+++a+r +L ++lL +sr ++
CP000859_3 305 ----------HDVVREIKDAADRAANLTRQLLAFSRRQSC 334

CP000859_1540: domain 1 of 1, from 37 to 96: score 47.1, E = 4.1e-13
*->anlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLRle
a++ HE+RT Lt+I+ + lL++ t l+e+q
CP000859_1 37 ADIGHEIRTALTGILKITALLEA---------TRLDEQQ-------- 66

dpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++i+ +++ l+Lind+Ld+s i +g
CP000859_1 67 ----KDHIRSIRFSTDAVLALINDILDFSDIASG 96

CP000859_3257: domain 1 of 1, from 765 to 831: score 44.9, E = 1.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L++I g+ael+l+ ++++++ +
CP000859_3 765 AVGRLAGGVAHDFNNMLNVIVGHAELALD---------ETRPDDPV- 801

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ il +a+r ++ ++lL ++r ++
CP000859_3 802 ----------CETLNEILGAARRSAEITRQLLAFARKQTI 831

CP000859_3260: domain 1 of 1, from 728 to 794: score 42.3, E = 9.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ L++I+gy+el+l + + + +
CP000859_3 728 SVGRLAGGVAHDFNNMLNVILGYTELALQ---------DMSPTDPL- 764

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ il++a+r +++ +lL ++r ++
CP000859_3 765 ----------YEDLKEILDAARRSSDITGQLLAFARRQTI 794

CP000859_2693: domain 2 of 2, from 728 to 794: score 41.9, E = 1.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L aI+g+ael+ e t+ +++q
CP000859_2 728 AVGVLAGGVAHDFNNMLGAIIGFAELAIE--------ATDSDSPQ-- 764

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yle il++a++ +L +lL ++r ++
CP000859_2 765 ----------YKYLENILQAARHSADLTGQLLAFARKQTI 794

CP000859_3258: domain 1 of 1, from 737 to 803: score 41.6, E = 1.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ L++I+g+ael+l+ + +++ +
CP000859_3 737 SVGRLAGGVAHDFNNMLNVILGHAELALD---------QVGPDDPL- 773

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l i ++a+r ++ +lL ++r +
CP000859_3 774 ----------REDLTEIFDAARRSAEITKQLLAFARRQII 803

CP000859_2731: domain 1 of 1, from 534 to 603: score 40.6, E = 2.9e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e ++ ++HE ++PLt I++ a+ L++++ ++ ++ +
CP000859_2 534 AWREVARRIAHEVKNPLTPISLSAQRLKRKF-------GPDADDPI- 572

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++e ++til+ ++ +++L+n++ +++ +
CP000859_2 573 ---------FEECIRTILDYVDIIRNLVNEFAAFAKFPSA 603

CP000859_3261: domain 1 of 1, from 708 to 774: score 40.4, E = 3.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ L++I+gy+el+l ++ +++++
CP000859_3 708 SVGRLAGGVAHDFNNMLNVILGYTELALQNM--------DKDDPL-- 744

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l il++a+r +++ ++lL ++r ++
CP000859_3 745 ----------YNDLTEILDAARRSSDITRQLLAFARRQTI 774

CP000859_0867: domain 1 of 1, from 540 to 609: score 39.6, E = 5.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s+++++++H++++ L++I+g+++lLl + ++ s+ +
CP000859_0 540 ALSQMASGIAHDFNNALSSIQGFSDLLLQ-------SPEKFSDTPL- 578

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++y+ i +a+ + +++l+ + r +
CP000859_0 579 ---------VKRYVGLINTAARDAAQVVRRLRKFYRPSDE 609

CP000859_1514: domain 1 of 1, from 397 to 463: score 39.2, E = 7.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ L++I+g+a l+l t ++++ +
CP000859_1 397 SVGRLAGGVAHDFNNMLNVILGHAALALS---------TLADDDLM- 433

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r le i+++a+r L ++lL ++r ++
CP000859_1 434 ----------RGHLEQIQKAADRSAGLTRQLLAFARKQTV 463

CP000859_1998: domain 1 of 1, from 330 to 385: score 36.5, E = 4.3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++ + +lsHEL+TP++ ++ ++ lL++el + +e+
CP000859_1 330 AKGKTINHLSHELKTPVAILSQALPLLEDEL-------AVVPEDN-- 367

peLRledpeyreyletilreaerllrL<-*
++ y+e+i+r+++r+ ++
CP000859_1 368 ---------WKPYVEIIERQLNRIVAI 385

CP000859_3265: domain 1 of 2, from 593 to 659: score 36.2, E = 5.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ L++I+gy+el+ + + +
CP000859_3 593 SVGRLAGGVAHDFNNMLSVILGYTELAMH---------RVPPHDPL- 629

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ il++a+r +++ ++lL ++r ++
CP000859_3 630 ----------YEDLREILSAAKRSSEITRQLLAFARKQTS 659

CP000859_3216: domain 1 of 1, from 226 to 292: score 36.1, E = 5.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ l+H++++ L++++g++el+++ ++ +e
CP000859_3 226 AIGQLVGKLAHDFNNMLSVVIGNTELIRM--------QQDIDENG-- 262

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+ti+ a r ++Li++lL ++r ++
CP000859_3 263 ----------REQLQTIQYVATRSSDLIRQLLAFARKQTV 292

CP000859_2328: domain 1 of 1, from 355 to 427: score 35.1, E = 1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
+ ++++a+++HE+++PL++I a l+++ ++ d +++e++
CP000859_2 355 SIGRLAAGVAHEINNPLAVINEKAGLIKD----IfQLTDRYAGDEKL 397

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i +++ r+ r+ +lL ++r
CP000859_2 398 -----------LGLVDAINESVARCGRITKQLLSFARHMDF 427

CP000859_1350: domain 1 of 1, from 359 to 433: score 33.9, E = 2.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +e++a+++HE+++P++ + a + + l+ ++e se +l
CP000859_1 359 SVGELAAGIAHEINNPVAIMVEEAGWIGD-----LLDEEEFSENANL 400

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e r+++ i +++r+ ++ lL ++r
CP000859_1 401 EEM-------RRAITQIGTQGRRCKEITHKLLSFARKTDS 433

CP000859_1314: domain 1 of 1, from 234 to 290: score 31.9, E = 8.6e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++la++sHEL PLt Ir+ +elL + + s + +
CP000859_1 234 SSKQLLADISHELCSPLTRIRLGTELLHK----------HVSGDRA- 269

peLRledpeyreyletilreaerllrLindl<-*
+ yl+ i+ e+ +++rL+ ++
CP000859_1 270 ----------ANYLKGIETEIVSMDRLVANM 290


Histogram of all scores:
score obs exp (one = represents 11 sequences)
----- --- ---
-15 1 0|=
-14 3 0|=
-13 41 2|*===
-12 133 74|======*======
-11 307 387|============================ *
-10 569 718|==================================================== *
-9 638 741|==========================================================*
-8 524 555|================================================ *
-7 430 349|===============================*========
-6 233 201|==================*===
-5 155 110|=========*=====
-4 86 59|=====*==
-3 47 31|==*==
-2 26 16|=*=
-1 12 8|*=
0 12 4|*=
1 1 2|*
2 4 1|*
3 0 0|
4 2 0|=
5 0 0|
6 1 0|=
7 1 0|=
> 8 39 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 177.8452
P(chi-square) = 2.854e-32

Total sequences searched: 3265

Whole sequence top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 33K


Acknowledgements:

This research is funded by:

Developed by: