Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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76 projects found  

1 accessions found for Delftia acidovorans SPH-1  

Data for CP000884  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000884.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000884_4336 CDS_4763547-4767410 140.2 3.3e-39 2
CP000884_5998 CDS_6724573-6721439 95.2 1.9e-26 1
CP000884_4894 CDS_5429615-5428221 94.1 3.9e-26 1
CP000884_3921 CDS_4339015-4336085 88.0 2e-24 1
CP000884_1505 CDS_1694303-1690392 87.0 3.8e-24 1
CP000884_3815 CDS_4222784-4219251 82.7 6.3e-23 2
CP000884_3071 CDS_3395806-3399072 82.7 6.3e-23 1
CP000884_3069 CDS_3392245-3394569 79.8 4.2e-22 1
CP000884_0734 CDS_816597-814072 79.7 4.5e-22 1
CP000884_1864 CDS_2071308-2068780 78.2 1.2e-21 1
CP000884_5902 CDS_6590046-6587332 76.7 3.3e-21 1
CP000884_4391 CDS_4825241-4824381 73.5 2.6e-20 1
CP000884_4982 CDS_5536922-5535846 73.4 2.7e-20 1
CP000884_2357 CDS_2608123-2606030 70.5 1.8e-19 1
CP000884_1090 CDS_1209460-1210854 68.2 8.1e-19 1
CP000884_3812 CDS_4217783-4216605 68.0 9.5e-19 1
CP000884_3063 CDS_3383798-3385303 67.0 1.8e-18 1
CP000884_0876 CDS_983563-985065 66.9 1.9e-18 1
CP000884_5962 CDS_6672689-6670830 64.4 1e-17 1
CP000884_0218 CDS_250283-246783 63.9 1.3e-17 1
CP000884_0451 CDS_482749-484182 61.6 6e-17 1
CP000884_1708 CDS_1905269-1903881 61.3 7.5e-17 1
CP000884_4390 CDS_4824335-4822374 60.1 1.7e-16 1
CP000884_2507 CDS_2787266-2785779 56.9 1.3e-15 1
CP000884_3965 CDS_4385232-4387805 56.9 1.3e-15 1
CP000884_5406 CDS_6021711-6023171 56.7 1.5e-15 1
CP000884_1501 CDS_1688314-1686551 55.7 2.9e-15 1
CP000884_3944 CDS_4361274-4362695 54.9 4.8e-15 1
CP000884_2704 CDS_2984401-2982989 54.4 6.4e-15 1
CP000884_2132 CDS_2351016-2349586 52.5 2.2e-14 1
CP000884_1549 CDS_1743910-1745058 52.2 2.8e-14 1
CP000884_0514 CDS_550659-553001 52.0 3.2e-14 1
CP000884_1595 CDS_1794671-1796134 51.5 4.5e-14 1
CP000884_1253 CDS_1396928-1398886 51.1 5.6e-14 1
CP000884_4278 CDS_4700821-4698941 49.0 2.2e-13 1
CP000884_3135 CDS_3459503-3461152 48.6 3e-13 1
CP000884_2913 CDS_3209948-3207297 48.0 4.3e-13 1
CP000884_0326 CDS_367870-366644 47.8 5e-13 1
CP000884_0121 CDS_133696-132518 46.4 1.3e-12 1
CP000884_0933 CDS_1044367-1045737 45.8 1.8e-12 1
CP000884_1142 CDS_1272676-1274103 45.4 2.3e-12 1
CP000884_5724 CDS_6393916-6394989 45.4 2.4e-12 1
CP000884_4313 CDS_4737031-4739280 42.7 1.4e-11 1
CP000884_2947 CDS_3253119-3255071 42.5 1.5e-11 1
CP000884_4222 CDS_4637774-4636230 39.6 1.1e-10 2
CP000884_2745 CDS_3028431-3026956 38.4 2.3e-10 1
CP000884_1320 CDS_1473701-1475188 37.1 5.2e-10 1
CP000884_2051 CDS_2252138-2250714 37.0 5.8e-10 1
CP000884_4306 CDS_4726724-4728634 36.4 8.5e-10 1
CP000884_3664 CDS_4041831-4038892 35.5 1.5e-09 1
CP000884_2842 CDS_3127563-3126061 35.4 1.6e-09 1
CP000884_1203 CDS_1342389-1340743 34.3 3.4e-09 1
CP000884_5056 CDS_5623963-5622665 33.0 7.9e-09 1
CP000884_0746 CDS_829039-830454 32.8 8.9e-09 1
CP000884_5883 CDS_6564998-6564138 30.6 3.6e-08 1
CP000884_5361 CDS_5964783-5966879 28.4 1.6e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000884_5998 1/1 654 719 .. 1 87 [] 95.2 1.9e-26
CP000884_4894 1/1 210 276 .. 1 87 [] 94.1 3.9e-26
CP000884_3921 1/1 512 577 .. 1 87 [] 88.0 2e-24
CP000884_1505 1/1 525 590 .. 1 87 [] 87.0 3.8e-24
CP000884_3071 1/1 500 565 .. 1 87 [] 82.7 6.3e-23
CP000884_3815 2/2 475 543 .. 1 87 [] 81.9 1.1e-22
CP000884_3069 1/1 280 345 .. 1 87 [] 79.8 4.2e-22
CP000884_0734 1/1 607 673 .. 1 87 [] 79.7 4.5e-22
CP000884_1864 1/1 607 673 .. 1 87 [] 78.2 1.2e-21
CP000884_5902 1/1 678 743 .. 1 87 [] 76.7 3.3e-21
CP000884_4391 1/1 51 119 .. 1 87 [] 73.5 2.6e-20
CP000884_4982 1/1 134 199 .. 1 87 [] 73.4 2.7e-20
CP000884_4336 2/2 921 987 .. 1 87 [] 71.9 7.3e-20
CP000884_2357 1/1 282 348 .. 1 87 [] 70.5 1.8e-19
CP000884_4336 1/2 367 432 .. 1 87 [] 68.3 7.9e-19
CP000884_1090 1/1 229 295 .. 1 87 [] 68.2 8.1e-19
CP000884_3812 1/1 164 229 .. 1 87 [] 68.0 9.5e-19
CP000884_3063 1/1 267 335 .. 1 87 [] 67.0 1.8e-18
CP000884_0876 1/1 255 321 .. 1 87 [] 66.9 1.9e-18
CP000884_5962 1/1 234 299 .. 1 87 [] 64.4 1e-17
CP000884_0218 1/1 689 755 .. 1 87 [] 63.9 1.3e-17
CP000884_0451 1/1 256 322 .. 1 87 [] 61.6 6e-17
CP000884_1708 1/1 229 295 .. 1 87 [] 61.3 7.5e-17
CP000884_4390 1/1 284 350 .. 1 87 [] 60.1 1.7e-16
CP000884_2507 1/1 261 324 .. 1 87 [] 56.9 1.3e-15
CP000884_3965 1/1 606 676 .. 1 87 [] 56.9 1.3e-15
CP000884_5406 1/1 270 335 .. 1 87 [] 56.7 1.5e-15
CP000884_1501 1/1 345 411 .. 1 87 [] 55.7 2.9e-15
CP000884_3944 1/1 252 317 .. 1 87 [] 54.9 4.8e-15
CP000884_2704 1/1 249 314 .. 1 87 [] 54.4 6.4e-15
CP000884_2132 1/1 247 316 .. 1 87 [] 52.5 2.2e-14
CP000884_1549 1/1 145 215 .. 1 87 [] 52.2 2.8e-14
CP000884_0514 1/1 546 618 .. 1 87 [] 52.0 3.2e-14
CP000884_1595 1/1 238 303 .. 1 87 [] 51.5 4.5e-14
CP000884_1253 1/1 431 498 .. 1 87 [] 51.1 5.6e-14
CP000884_4278 1/1 398 466 .. 1 87 [] 49.0 2.2e-13
CP000884_3135 1/1 310 373 .. 1 87 [] 48.6 3e-13
CP000884_2913 1/1 519 584 .. 1 87 [] 48.0 4.3e-13
CP000884_0326 1/1 197 259 .. 1 87 [] 47.8 5e-13
CP000884_0121 1/1 164 228 .. 1 87 [] 46.4 1.3e-12
CP000884_0933 1/1 237 306 .. 1 87 [] 45.8 1.8e-12
CP000884_1142 1/1 239 301 .. 1 87 [] 45.4 2.3e-12
CP000884_5724 1/1 134 198 .. 1 87 [] 45.4 2.4e-12
CP000884_4313 1/1 352 418 .. 1 87 [] 42.7 1.4e-11
CP000884_2947 1/1 291 357 .. 1 87 [] 42.5 1.5e-11
CP000884_4222 2/2 236 314 .. 1 87 [] 39.1 1.5e-10
CP000884_2745 1/1 252 321 .. 1 87 [] 38.4 2.3e-10
CP000884_1320 1/1 234 313 .. 1 87 [] 37.1 5.2e-10
CP000884_2051 1/1 244 308 .. 1 83 [. 37.0 5.8e-10
CP000884_4306 1/1 391 458 .. 1 87 [] 36.4 8.5e-10
CP000884_3664 1/1 601 669 .. 1 87 [] 35.5 1.5e-09
CP000884_2842 1/1 254 313 .. 1 87 [] 35.4 1.6e-09
CP000884_1203 1/1 294 364 .. 1 87 [] 34.3 3.4e-09
CP000884_5056 1/1 178 244 .. 1 87 [] 33.0 7.9e-09
CP000884_0746 1/1 250 302 .. 1 74 [. 32.8 8.9e-09
CP000884_5883 1/1 44 117 .. 1 87 [] 30.6 3.6e-08
CP000884_5361 1/1 459 526 .. 1 87 [] 28.4 1.6e-07

Alignments of top-scoring domains:
CP000884_5998: domain 1 of 1, from 654 to 719: score 95.2, E = 1.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s flan+sHE+RTP++aI+g++e+L+e t+l + q
CP000884_5 654 ARSTFLANMSHEIRTPMNAIIGFTEALRE---------TALQPTQ-- 689

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+t++ +a+++lrL+nd+Ld ++++ g
CP000884_5 690 ----------ARYLDTVHYAARSMLRLLNDILDTAKLDKG 719

CP000884_4894: domain 1 of 1, from 210 to 276: score 94.1, E = 3.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHE+RTPLt++ g++e+L++ +l +e+r
CP000884_4 210 MRRDFVANVSHEIRTPLTVLVGFVETLQN---------LPLEPEER- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl + ++aer+++L++dlL lsr+e
CP000884_4 247 ----------NRYLGLMAQQAERMQHLVEDLLALSRLEGS 276

CP000884_3921: domain 1 of 1, from 512 to 577: score 88.0, E = 2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks fla++sHE+RTPL+aI+g++e+L + + +seeq
CP000884_3 512 EKSSFLAAMSHEIRTPLNAILGNLEILGR---------SSMSEEQ-- 547

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l ti +++++ll L+nd+Ld+s+ie+g
CP000884_3 548 ----------QTRLATISSSSHSLLTLLNDVLDFSKIESG 577

CP000884_1505: domain 1 of 1, from 525 to 590: score 87.0, E = 3.8e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHE+RTP+++++g++ l + t+l++ q
CP000884_1 525 AKSDFLAIMSHEIRTPMNTVIGMTRLVQQ---------TALTSRQ-- 560

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yle+++r+a ll+ ind+Ld+s+ieag
CP000884_1 561 ----------RGYLEKVERSASALLAVINDILDFSKIEAG 590

CP000884_3071: domain 1 of 1, from 500 to 565: score 82.7, E = 6.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTPL + +g++elL tel+ q
CP000884_3 500 AKSTFLATMSHEIRTPLYGALGTLELLGL---------TELTQLQ-- 535

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y+++i+ ++ ll++i+d+Ld s+iea
CP000884_3 536 ----------RKYVDRIEASSSILLQIISDILDTSKIEAD 565

CP000884_3815: domain 2 of 2, from 475 to 543: score 81.9, E = 1.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++ + +a+lL + + ++l ++q
CP000884_3 475 YKSEFLANMSHELRTPLNSTLILAKLLAD------NKPGNLQADQ-- 513

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y +ti+ ++ ll+Lind+Ldls+ieag
CP000884_3 514 ----------VKYAQTIHAAGSDLLALINDILDLSKIEAG 543

CP000884_3069: domain 1 of 1, from 280 to 345: score 79.8, E = 4.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla++sHE+RTPL +I+g++elL + ++eq
CP000884_3 280 AKTQFLATMSHEIRTPLFGILGTLELLAL---------SRVPSEQ-- 315

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl +++++ +llr++nd Ldls ieag
CP000884_3 316 ----------TRYLGAMQQASASLLRIVNDSLDLSAIEAG 345

CP000884_0734: domain 1 of 1, from 607 to 673: score 79.7, E = 4.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksef+an+sHELRTPL +I+g+ael +++ ++
CP000884_0 607 VKSEFVANMSHELRTPLQSIMGFAELGGL--------RSHGNAAM-- 643

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ i+ +++r+l+L+ndlLd +++e+
CP000884_0 644 ----------AEMFSDIHAAGQRMLALVNDLLDVAKLESA 673

CP000884_1864: domain 1 of 1, from 607 to 673: score 78.2, E = 1.2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksef+an+sHELRTPL +I+g+ael ++ ++
CP000884_1 607 VKSEFVANMSHELRTPLQSIMGFAELGGL--------RSRGNPAM-- 643

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ i++++ r+l+L+ndlLd +++e+
CP000884_1 644 ----------ADMFNDIHEAGIRMLALVNDLLDVAKLESA 673

CP000884_5902: domain 1 of 1, from 678 to 743: score 76.7, E = 3.3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l+++sH+LRTPLt+I+g+ae++++ + ++ +
CP000884_5 678 MRNTLLSAVSHDLRTPLTTILGAAEAAQR----------HVPPGGA- 713

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le ++ +a+ ++rL+++lLd++r+++g
CP000884_5 714 ----------ADMLEQVRIQAQAMQRLVENLLDMARLQQG 743

CP000884_4391: domain 1 of 1, from 51 to 119: score 73.5, E = 2.6e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fl+++sHE+RTP+ aIr +a lLl+ +d ++l+ eq
CP000884_4 51 LKSHFLSYMSHEFRTPIGAIRSNARLLLDHVD------GPLTTEQ-- 89

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i++ a ++++ndlLdl++ieag
CP000884_4 90 ----------TRQVGFIQETAAEFSEMVNDLLDLAKIEAG 119

CP000884_4982: domain 1 of 1, from 134 to 199: score 73.4, E = 2.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a e+++nl+HE+++PL +Irg+a+lL++ +l+++++
CP000884_4 134 AHKELIRNLAHEIKNPLGGIRGAAQLLQM----------DLDAPEL- 169

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey+e+i++ea+rl++L+++lL r ++
CP000884_4 170 ----------REYTEVIIHEADRLQALVDRLLAPHRHPHE 199

CP000884_4336: domain 2 of 2, from 921 to 987: score 71.9, E = 7.3e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+efla+l+HELR+PL+ I+ +++L++ t+ +++ +
CP000884_4 921 RKDEFLATLAHELRNPLAPISHGLQILKR---------TASGDDSV- 957

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r e ++r+++++ r+++dlL+ sri +g
CP000884_4 958 ----------RHSHEMLERQVNHMIRMVDDLLEVSRITTG 987

CP000884_2357: domain 1 of 1, from 282 to 348: score 70.5, E = 1.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fl++ sHE+RTPL+aI+g++el+++ +++l+ ++
CP000884_2 282 AKSLFLSTTSHEIRTPLSAIIGLLELAQD--------REKLGLPH-- 318

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l ++++++ +l L+ ++Ldl rie+g
CP000884_2 319 ----------RDTLAAAHKASQGMLLLLGNVLDLHRIESG 348

CP000884_4336: domain 1 of 2, from 367 to 432: score 68.3, E = 7.9e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f++n+sHELRTPLt I+g +e +l+ ++ +
CP000884_4 367 AKTVFFSNISHELRTPLTLILGPLEDALR---------EHGGQVP-- 402

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ i+r a rl++L+n lLd+srieag
CP000884_4 403 ----------AGQTQMIHRNALRLQKLVNALLDFSRIEAG 432

CP000884_1090: domain 1 of 1, from 229 to 295: score 68.2, E = 8.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f a+++HEL+TPLt+++ +el+l+ ++se ++
CP000884_1 229 QMEAFNADVAHELNTPLTTLISSCELALR---------KPRSEAEL- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l + l++++r+ ++ d+L ls+++ g
CP000884_1 266 ----------REVLASNLEDLRRMAGIVADMLFLSQADRG 295

CP000884_3812: domain 1 of 1, from 164 to 229: score 68.0, E = 9.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f+a lsH+LRTPL +I+++a +L + ++ + +
CP000884_3 164 INEMFMAVLSHDLRTPLQSIKAAATVLTR---------QPDPGKV-- 199

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e++l++++r++r+i+dlLd +ri++
CP000884_3 200 ----------ANMAERMLSSSQRMSRMIEDLLDVTRIRQA 229

CP000884_3063: domain 1 of 1, from 267 to 335: score 67.0, E = 1.8e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++an+sH+LRTPL+++ gy+e+Ll +d+ l++ +r
CP000884_3 267 ERRELIANVSHDLRTPLSSLHGYLETLLL-------KDAVLDATER- 305

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl ++l +++ +L + l +l+r+e g
CP000884_3 306 ----------RRYLGIALAQSQKVGELAQSLFELARLEYG 335

CP000884_0876: domain 1 of 1, from 255 to 321: score 66.9, E = 1.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +fla+++H+L+TPL+++r+ ael+++ + s e++
CP000884_0 255 TQKRFLADAAHQLKTPLAGLRMQAELAQR---------EGVSTEEL- 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l i r++ r + +n+lL l+r+e+
CP000884_0 292 ----------RQSLAQIARSSIRATHTVNQLLALARAESA 321

CP000884_5962: domain 1 of 1, from 234 to 299: score 64.4, E = 1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fl+++sH+LR+PL+a+ +++e+++ +++
CP000884_5 234 AKSRFLSAASHDLRQPLHALGLLVETARQ---------RNADGAL-- 269

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ ++ +a++l + ndlLdlsr+e+g
CP000884_5 270 ----------AGVLDDAQACAQSLGTMCNDLLDLSRLENG 299

CP000884_0218: domain 1 of 1, from 689 to 755: score 63.9, E = 1.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++ +a++ HELR PL++++gy+++Ll+ ++q+
CP000884_0 689 AKTRYVAGMTHELRSPLNSLLGYTQILLK-------------SPQV- 721

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
d+ +re l+t+++++++l++Li++ L+l+ ieag
CP000884_0 722 ------DGWVRETLSTMQHSGQHLRALIDESLELASIEAG 755

CP000884_0451: domain 1 of 1, from 256 to 322: score 61.6, E = 6e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTP+t +++ ++++l +++s+e+
CP000884_0 256 RLSHFSADIAHELRTPVTNLITQSHVALG---------QPRSAEE-- 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l + l+e +r++r+i d+L l++ e+
CP000884_0 292 ---------YREILYSNLEEFDRMSRMIGDMLFLAQTEND 322

CP000884_1708: domain 1 of 1, from 229 to 295: score 61.3, E = 7.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f a+++HEL+TPL++++ ael+l+ ++++++
CP000884_1 229 QMESFNADVAHELNTPLSTLISSAELALR---------KRRTSDEL- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++ l++++r+ ++i d+L ls ++ g
CP000884_1 266 ----------VDVLSSNLEDLHRMASIIADMLFLSNADRG 295

CP000884_4390: domain 1 of 1, from 284 to 350: score 60.1, E = 1.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a lsHELRTPL+ + g ++lL++ ++lse +
CP000884_4 284 TKDDFVAVLSHELRTPLSLLNGGTHLLKR---------ANLSEAML- 320

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ i++ ++ +r+i d+Ld+sr+ +g
CP000884_4 321 ----------KKGIDAIEKGVKAQSRIIADILDISRLTTG 350

CP000884_2507: domain 1 of 1, from 261 to 324: score 56.9, E = 1.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f++++sH+LRTPL+++++ ++ +++ ++ ++eq+
CP000884_2 261 DQKRFVRDASHQLRTPLAVLKAQLQSAQR---------GDVPAEQA- 297

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e i ++r rL n++L l++ e+
CP000884_2 298 -------------FEEIGATVDRATRLANQMLALAKVEQL 324

CP000884_3965: domain 1 of 1, from 606 to 676: score 56.9, E = 1.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++++++HEL++PLtaI+ y++ +l++l+k ++l+eeq+
CP000884_3 606 TMGEMASSVAHELNQPLTAISNYCSGMLTRLEK-----GTLTEEQM- 646

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +le+ ++a+r ++i +++ + + ++
CP000884_3 647 ----------KFALEKTAHQAQRAGQIILRIRSFVKRSEP 676

CP000884_5406: domain 1 of 1, from 270 to 335: score 56.7, E = 1.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +++l HEL+ P++aIrg+ elL+e +l++ +r
CP000884_5 270 YIEGYVRALTHELKSPVAAIRGAGELLQE----------DLPSADR- 305

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + + ++ +rl++L+++lL ls++e+
CP000884_5 306 ----------ELFARQVVDQCQRLQNLVDQLLRLSQLEQR 335

CP000884_1501: domain 1 of 1, from 345 to 411: score 55.7, E = 2.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++ a+++HE+R+PL+aI + lL e+l ++++ q
CP000884_1 345 SMGRMSAAVAHEIRNPLAAITQANALLAEDL--------AQDPAQ-- 381

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +++ + aerl r+++d+L ++r+++
CP000884_1 382 ----------QQLCRIVGQNAERLARIVEDVLNIARAQQH 411

CP000884_3944: domain 1 of 1, from 252 to 317: score 54.9, E = 4.8e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++a+++HELRTPL+a+ ++e+Ll+ + q
CP000884_3 252 RERNLIADAAHELRTPLAAMHVNVEALLR---------LGSEPRQ-- 287

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ +++lr+ +r +r++ +lL+l r e++
CP000884_3 288 ----------QELMDSLLRSNQRASRMVAQLLQLMRSETE 317

CP000884_2704: domain 1 of 1, from 249 to 314: score 54.4, E = 6.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f ++++HELRTPL+ Ir ae +l ++++ q+
CP000884_2 249 RERRFSRDVAHELRTPLAEIRISAESALI----------DADPTQI- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ ++++ r++r ++ lL l+r+e+g
CP000884_2 285 ----------QRALNATIQASSRMQRSVDTLLLLARLESG 314

CP000884_2132: domain 1 of 1, from 247 to 316: score 52.5, E = 2.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f+a+++HELRTP++aIr +ae+L + +l++ +
CP000884_2 247 RERSFIADAAHELRTPVAAIRVHAEALNN---------LPLPAGL-A 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++L l+ + ++ r +rL++++L l r++ag
CP000884_2 284 DRL-------GARLDALVGCSARASRLVDQMLALMRADAG 316

CP000884_1549: domain 1 of 1, from 145 to 215: score 52.2, E = 2.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HE ++PL+aI + +++++l +++++ ++
CP000884_1 145 SLGQLTASIAHEVNQPLAAIVTSGNACQRWL--------AQDPPNLA 183

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++le+il +a+r ++ i +++ ++r ea+
CP000884_1 184 KA--------GQALERILGDAQRASDVIARIRSMARGEAP 215

CP000884_0514: domain 1 of 1, from 546 to 618: score 52.0, E = 3.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e ++ ++HE+++PLt I++ ae + ++l ++l + +++
CP000884_0 546 AWGEVARRVAHEIKNPLTPIQLSAERMAMRLT------DKLQPAEQA 586

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ti +++ + rL+++++d++r+ a
CP000884_0 587 LL--------AKSVKTIVDQVGAMKRLVDEFRDYARLPAA 618

CP000884_1595: domain 1 of 1, from 238 to 303: score 51.5, E = 4.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+a+++HELR PL+a+++ + +L++ + + +
CP000884_1 238 AQQHFVADAAHELRSPLAALKLQLVALQR----------APDVAAH- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++++ ++r rL+++lL+l+r ea+
CP000884_1 274 ----------DEAVQRLSAGIDRATRLVEQLLTLARQEAQ 303

CP000884_1253: domain 1 of 1, from 431 to 498: score 51.1, E = 5.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTPL+ I++ a+ L ++l ++ ++++
CP000884_1 431 EQRDFVAMVSHELRTPLAIILTSAQQLARNL-------AAPPDKT-- 468

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i+++a+rll+L++d L r+ +
CP000884_1 469 ----------LARSRNIREAAQRLLALVDDCLADDRMADP 498

CP000884_4278: domain 1 of 1, from 398 to 466: score 49.0, E = 2.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +++HEL++PLta+r++a +++l + + e++
CP000884_4 398 VIGQLSTGVAHELNQPLTALRTLAGNSQRFL-------ERGDTETT- 436

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r le++ + a+r+ r+ +l+ ++r +g
CP000884_4 437 ----------RVNLERMAQLADRMGRITGQLRNFARKSSG 466

CP000884_3135: domain 1 of 1, from 310 to 373: score 48.6, E = 3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++la+++HELRTPL+++r+ +e+ ++ + l+ ++
CP000884_3 310 SRQRWLADVAHELRTPLSTMRAEVEAVQD---------GVLPMDD-- 345

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++r++ rl rL++d L s + +
CP000884_3 346 -----------RMALRLHRQIMRLIRLVSD-LRVSLDDPQ 373

CP000884_2913: domain 1 of 1, from 519 to 584: score 48.0, E = 4.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a++ H+L +PL+a r++++lL+ +l ++
CP000884_2 519 YKTRFVAAAVHDLLQPLNAARMFSSLLRS----------HLHDDAG- 554

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++i+ ++ ++++ lLd+sr+e+g
CP000884_2 555 ----------RHVADSIDGALAAQDAILGSLLDISRMESG 584

CP000884_0326: domain 1 of 1, from 197 to 259: score 47.8, E = 5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +lan+sHELR PLt Ir+ +e + + +++s+
CP000884_0 197 SHKSLLANASHELRSPLTRIRMGLEFMGD---------DPASARA-- 232

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
i+r + l++L++++L sr+e+
CP000884_0 233 -------------RAEIQRNISELDQLVDEILLASRLETY 259

CP000884_0121: domain 1 of 1, from 164 to 228: score 46.4, E = 1.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a++sHELRTPLt++++ ++++ +++ ++++ +
CP000884_0 164 ERRATAASISHELRTPLTVLQARLHAICDGV-------IAADDTE-- 201

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+t+l ++e+l rL+ dl +ls ++ag
CP000884_0 202 -------------LNTLLFQVEHLGRLVGDLHTLSMADAG 228

CP000884_0933: domain 1 of 1, from 237 to 306: score 45.8, E = 1.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++ ++HELRTPL++I + a +L + a ++++++ +
CP000884_0 237 RERSLANEVAHELRTPLASIALQARALGD------APAGAMDAPAQ- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l i r+a + + +n+lL l+r++
CP000884_0 277 ----------RQALAQIGRDALHAGHVLNQLLALARAGRA 306

CP000884_1142: domain 1 of 1, from 239 to 301: score 45.4, E = 2.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++an++HELRTPL++ + ++++l+ + +
CP000884_1 239 VERSMAANAAHELRTPLAVATLRLQTALD---------RGVDNTD-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++++erl++ + lL+lsr+ +g
CP000884_1 275 -------------VRAAYEALERLRQRTEKLLQLSRAASG 301

CP000884_5724: domain 1 of 1, from 134 to 198: score 45.4, E = 2.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + a+++HELRTP+t ++g ++ L ++++ +
CP000884_5 134 ERAFWSAAIAHELRTPVTILSGRLQGLSDGVF----------LPS-- 168

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l ++ ++e l rLi+dl+ l e+g
CP000884_5 169 ----------KDMLASLMTQVEGLTRLIDDLRLLGLQENG 198

CP000884_4313: domain 1 of 1, from 352 to 418: score 42.7, E = 1.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++ +++H++++ + aI+g++el+++ + + +
CP000884_4 352 ALGTMAGGIAHDFNNIVGAILGNVELAKA---------DCGGNAAA- 388

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ i+++++r ++L++++L++sr e +
CP000884_4 389 ----------IESLQEIEKAGRRARDLVRQILTFSRNEPP 418

CP000884_2947: domain 1 of 1, from 291 to 357: score 42.5, E = 1.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++f+ +++H++++ L a++ +elL++ +++++rl
CP000884_2 291 AIGRFTGGVAHDFNNLLMAVLSSLELLRK----------RMPPDERL 327

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++et+ r a+r +L ++++ ++r ++
CP000884_2 328 ----------RALVETATRGAQRGASLTQRMMAFARQQEL 357

CP000884_4222: domain 2 of 2, from 236 to 314: score 39.1, E = 1.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +++ +++HELRTPLtaI+++++++++ +l ++ +
CP000884_4 236 RERRWSDDAAHELRTPLTAIKTHVQVAQM----------ALAAPGM- 271

peLRl...edpeyreyletilreaerllrLindlLdlsrieag<-*
p++ l + + r+ l + + +e+l++ +++lL l+r+e+
CP000884_4 272 PAGLLaapPGSMARDSLAQAGEGVEHLQHTLEQLLLLARLEQH 314

CP000884_2745: domain 1 of 1, from 252 to 321: score 38.4, E = 2.3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a+++H+L TP+++Ir+++ +++ +++ +++ + +
CP000884_2 252 EQRRFIADAAHQLQTPMAGIRLLVGDMRR-----TQHADPQQPMD-- 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l +++ a r r++++lL ++r+e++
CP000884_2 292 ----------AEVLAHLDEVAARGARMVRQLLAYARAEEE 321

CP000884_1320: domain 1 of 1, from 234 to 313: score 37.1, E = 5.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a+++H+LRTPL+a+++ +e+ + +++ +e r
CP000884_1 234 GQRRFVADAAHQLRTPLAALQAQVEAWALSA-------QAAQAEAR- 272

peLR...l.edpeyreyletilreaerllrLindlLdlsrieag<-*
R++++ + +e ++++++r ++L ++lL lsr++a
CP000884_1 273 ---RkgtEaQVVLSVTQIEQLRDATRRTSQLARQLLALSRADAR 313

CP000884_2051: domain 1 of 1, from 244 to 308: score 37.0, E = 5.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ a+l+HE+R+PL ++r+ ae +l+ ++++ +++
CP000884_2 244 TLGRLSAGLAHEIRNPLGTMRMKAENALA---------APAPLREAR 281

peLRledpeyreyletilreaerllrLindlLdlsr<-*
+ +le +l ++ rl++L++ lL l++
CP000884_2 282 S---------QGALEAVLAQTARLEDLVSSLLALTQ 308

CP000884_4306: domain 1 of 1, from 391 to 458: score 36.4, E = 8.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++ HE+RTPLt + g+a L++ ++ +++ +
CP000884_4 391 EQRQFFNMINHEFRTPLTIVDGAATELQT--------FPTTDADSL- 428

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e + i+r+++rl L++ L r++ag
CP000884_4 429 ----------IEQASQIRRASRRLMTLVDTCLINDRLDAG 458

CP000884_3664: domain 1 of 1, from 601 to 669: score 35.5, E = 1.5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ L+a++g++elL++ l + + +
CP000884_3 601 AVGQLTGGLAHDFNNLLAAVMGNLELLQRML-------ARGQVDNL- 639

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ ++ +++r L ++lL +sr +
CP000884_3 640 ----------TRFIHGAQGAVRRAATLTQRLLAFSRRQIL 669

CP000884_2842: domain 1 of 1, from 254 to 313: score 35.4, E = 1.6e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +la++sH+LRTPL+ +r+ +e+ + ++
CP000884_2 254 DRAVMLAGISHDLRTPLARLRLETEM------------SVVDDVA-- 286

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e + ++ +l++ i+ +Ld++r ++
CP000884_2 287 -------------REHMVADIVQLDATIDKFLDYARPDHV 313

CP000884_1203: domain 1 of 1, from 294 to 364: score 34.3, E = 3.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++a+++HEL++PLta++ +++++++ l +e ++e
CP000884_1 294 TLGELAAGMAHELNQPLTAVLSNSQAARRLL-------AEDPPEM-- 331

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ r++ + ++a+r ++ + +l+ l
CP000884_1 332 DAA-------RQAMTQAAEQAKRASAVVGRLRRLVEQPGL 364

CP000884_5056: domain 1 of 1, from 178 to 244: score 33.0, E = 7.9e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s++ ++H+LR + ++ ++ L + ++++++ r
CP000884_5 178 QRSQLWEQVAHDLRSNVGVVANVTHGLGM---------QHAPAQSR- 214

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ ++r +++l++L++d+ +l+++ ag
CP000884_5 215 ----------EKLLRMLDRNVQSLRHLLDDVTELAKLHAG 244

CP000884_0746: domain 1 of 1, from 250 to 302: score 32.8, E = 8.9e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++efl++++HEL+TPL+ +r +el e + +s+e
CP000884_0 250 NQQEFLSMAAHELKTPLALMRVQIELEPE---------DRRSPEL-- 285

peLRledpeyreyletilreaerllrL<-*
+ ++ + r++++ll+L
CP000884_0 286 ----------LKDVDHMARQVQQLLHL 302

CP000884_5883: domain 1 of 1, from 44 to 117: score 30.6, E = 3.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e+l ++sH+LR PL ++ + l e l++ ++ s+++++
CP000884_5 44 AQQEWLHAVSHDLRAPLRHVLSFGPLVDE-----LLSQAAPSPQELQ 85

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ r +l+t++++a+r+ +++ lL lsr+
CP000884_5 86 EA--------RGFLQTMDQSARRMGGMLDGLLALSRAART 117

CP000884_5361: domain 1 of 1, from 459 to 526: score 28.4, E = 1.6e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++ HE+RTPL+++ +a l+ +++ + s +r
CP000884_5 459 EQRQFFNMVNHEFRTPLAVVDSAATEQLT-----FPSTDIDSQLER- 499

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
i+r+ +rl +L+++ L r++a+
CP000884_5 500 -------------AAQIRRACRRLTALVDNCLVSDRLDAP 526


Histogram of all scores:
score obs exp (one = represents 20 sequences)
----- --- ---
-14 7 0|=
-13 52 4|*==
-12 192 138|======*===
-11 541 715|============================ *
-10 934 1328|=============================================== *
-9 1176 1371|==========================================================*
-8 1025 1026|===================================================*
-7 813 647|================================*========
-6 540 372|==================*========
-5 299 204|==========*====
-4 194 109|=====*====
-3 95 57|==*==
-2 55 30|=*=
-1 19 15|*
0 16 8|*
1 10 4|*
2 6 2|*
3 2 1|*
4 1 0|=
5 0 0|
> 6 63 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 487.9923
P(chi-square) = 0

Total sequences searched: 6040

Whole sequence top hits:
tophits_s report:
Total hits: 56
Satisfying E cutoff: 56
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 57
Satisfying E cutoff: 57
Total memory: 44K


Acknowledgements:

This research is funded by:

Developed by: