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Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Pseudomonas putida GB-1  

Data for CP000926  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000926.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000926_1243 CDS_1399984-1397231 101.0 3.8e-28 1
CP000926_3718 CDS_4166378-4168309 93.0 7.1e-26 1
CP000926_4845 CDS_5443289-5446060 90.7 3.2e-25 1
CP000926_1441 CDS_1620224-1617867 89.1 8.9e-25 1
CP000926_2127 CDS_2387556-2391005 83.9 2.5e-23 1
CP000926_5333 CDS_5990497-5991804 83.4 3.5e-23 1
CP000926_2163 CDS_2427029-2429281 83.1 4.4e-23 1
CP000926_3704 CDS_4152502-4149848 73.1 3e-20 1
CP000926_1685 CDS_1926418-1925066 70.8 1.4e-19 1
CP000926_0147 CDS_152718-150952 70.4 1.7e-19 1
CP000926_0356 CDS_416334-417770 69.9 2.5e-19 1
CP000926_4362 CDS_4916232-4914853 66.9 1.7e-18 1
CP000926_0829 CDS_948299-946902 66.6 2e-18 1
CP000926_2510 CDS_2842711-2839439 65.4 4.5e-18 1
CP000926_5068 CDS_5698582-5699667 65.0 5.8e-18 1
CP000926_2969 CDS_3342385-3343566 64.7 7.1e-18 1
CP000926_0020 CDS_20820-22226 63.1 2.1e-17 1
CP000926_4803 CDS_5403144-5401156 62.7 2.6e-17 1
CP000926_3907 CDS_4378251-4377034 61.8 4.9e-17 1
CP000926_1283 CDS_1442334-1438855 61.3 6.4e-17 1
CP000926_4206 CDS_4735320-4733713 61.2 6.8e-17 1
CP000926_4342 CDS_4894543-4895925 60.7 1e-16 1
CP000926_2994 CDS_3361185-3365300 60.6 1.1e-16 1
CP000926_1629 CDS_1861648-1859258 59.7 1.9e-16 1
CP000926_3985 CDS_4461831-4463171 59.1 2.8e-16 1
CP000926_2556 CDS_2890231-2891496 59.0 3e-16 1
CP000926_4455 CDS_5019817-5018507 58.6 3.9e-16 1
CP000926_0044 CDS_46322-47740 58.4 4.4e-16 1
CP000926_2582 CDS_2917599-2918951 54.1 7.2e-15 1
CP000926_2241 CDS_2519536-2517353 54.0 7.6e-15 1
CP000926_0293 CDS_347598-346231 53.0 1.5e-14 1
CP000926_3096 CDS_3495428-3493764 51.8 3.3e-14 1
CP000926_3115 CDS_3516444-3514537 51.1 5.1e-14 1
CP000926_2964 CDS_3339900-3338758 50.1 9.6e-14 1
CP000926_3765 CDS_4220460-4219138 49.6 1.4e-13 1
CP000926_2130 CDS_2392389-2393615 49.4 1.6e-13 1
CP000926_0573 CDS_653286-651940 48.2 3.4e-13 1
CP000926_2502 CDS_2829637-2831097 45.5 1.9e-12 2
CP000926_1245 CDS_1400902-1402275 44.5 3.8e-12 1
CP000926_2488 CDS_2810733-2812856 43.6 6.9e-12 1
CP000926_1941 CDS_2199676-2197289 43.6 7.1e-12 1
CP000926_2503 CDS_2831395-2832888 42.8 1.2e-11 1
CP000926_4664 CDS_5242041-5245016 42.6 1.4e-11 1
CP000926_0286 CDS_338073-336259 41.1 3.5e-11 1
CP000926_0269 CDS_320193-321506 40.2 6.2e-11 1
CP000926_1959 CDS_2216534-2217889 39.8 8.4e-11 1
CP000926_4381 CDS_4936703-4938460 37.1 4.8e-10 1
CP000926_2489 CDS_2814479-2812863 36.0 9.8e-10 1
CP000926_2362 CDS_2664319-2662664 34.3 3e-09 1
CP000926_1006 CDS_1153464-1154918 33.9 3.7e-09 1
CP000926_4317 CDS_4860335-4862239 33.9 3.9e-09 1
CP000926_3525 CDS_3952506-3951346 33.1 6.4e-09 1
CP000926_4469 CDS_5032224-5034248 32.3 1.1e-08 1
CP000926_1943 CDS_2202413-2200167 32.1 1.2e-08 1
CP000926_4201 CDS_4730602-4729256 31.2 2.2e-08 1
CP000926_2361 CDS_2662600-2660534 30.9 2.7e-08 1
CP000926_2467 CDS_2780845-2782143 29.5 6.9e-08 1
CP000926_2354 CDS_2653479-2654885 28.2 1.6e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000926_1243 1/1 285 350 .. 1 87 [] 101.0 3.8e-28
CP000926_3718 1/1 264 329 .. 1 87 [] 93.0 7.1e-26
CP000926_4845 1/1 397 462 .. 1 87 [] 90.7 3.2e-25
CP000926_1441 1/1 305 370 .. 1 87 [] 89.1 8.9e-25
CP000926_2127 1/1 480 548 .. 1 87 [] 83.9 2.5e-23
CP000926_5333 1/1 205 272 .. 1 87 [] 83.4 3.5e-23
CP000926_2163 1/1 267 332 .. 1 87 [] 83.1 4.4e-23
CP000926_3704 1/1 651 719 .. 1 87 [] 73.1 3e-20
CP000926_1685 1/1 232 298 .. 1 87 [] 70.8 1.4e-19
CP000926_0147 1/1 368 436 .. 1 87 [] 70.4 1.7e-19
CP000926_0356 1/1 255 321 .. 1 87 [] 69.9 2.5e-19
CP000926_4362 1/1 244 309 .. 1 87 [] 66.9 1.7e-18
CP000926_0829 1/1 241 307 .. 1 87 [] 66.6 2e-18
CP000926_2510 1/1 598 664 .. 1 87 [] 65.4 4.5e-18
CP000926_5068 1/1 132 197 .. 1 87 [] 65.0 5.8e-18
CP000926_2969 1/1 170 235 .. 1 87 [] 64.7 7.1e-18
CP000926_0020 1/1 238 304 .. 1 87 [] 63.1 2.1e-17
CP000926_4803 1/1 418 483 .. 1 87 [] 62.7 2.6e-17
CP000926_3907 1/1 184 252 .. 1 87 [] 61.8 4.9e-17
CP000926_1283 1/1 796 863 .. 1 87 [] 61.3 6.4e-17
CP000926_4206 1/1 308 373 .. 1 87 [] 61.2 6.8e-17
CP000926_4342 1/1 240 306 .. 1 87 [] 60.7 1e-16
CP000926_2994 1/1 1002 1070 .. 1 87 [] 60.6 1.1e-16
CP000926_1629 1/1 710 770 .. 1 81 [. 59.7 1.9e-16
CP000926_3985 1/1 228 292 .. 1 87 [] 59.1 2.8e-16
CP000926_2556 1/1 201 263 .. 1 87 [] 59.0 3e-16
CP000926_4455 1/1 211 277 .. 1 87 [] 58.6 3.9e-16
CP000926_0044 1/1 241 307 .. 1 87 [] 58.4 4.4e-16
CP000926_2582 1/1 230 295 .. 1 87 [] 54.1 7.2e-15
CP000926_2241 1/1 361 427 .. 1 87 [] 54.0 7.6e-15
CP000926_0293 1/1 253 311 .. 1 87 [] 53.0 1.5e-14
CP000926_3096 1/1 195 260 .. 1 87 [] 51.8 3.3e-14
CP000926_3115 1/1 267 332 .. 1 87 [] 51.1 5.1e-14
CP000926_2964 1/1 150 216 .. 1 87 [] 50.1 9.6e-14
CP000926_3765 1/1 224 288 .. 1 87 [] 49.6 1.4e-13
CP000926_2130 1/1 168 241 .. 1 87 [] 49.4 1.6e-13
CP000926_0573 1/1 232 291 .. 1 87 [] 48.2 3.4e-13
CP000926_1245 1/1 233 292 .. 1 87 [] 44.5 3.8e-12
CP000926_2502 2/2 272 336 .. 1 87 [] 44.1 4.8e-12
CP000926_2488 1/1 337 405 .. 1 87 [] 43.6 6.9e-12
CP000926_1941 1/1 427 495 .. 1 87 [] 43.6 7.1e-12
CP000926_2503 1/1 272 336 .. 1 87 [] 42.8 1.2e-11
CP000926_4664 1/1 756 822 .. 1 87 [] 42.6 1.4e-11
CP000926_0286 1/1 370 438 .. 1 87 [] 41.1 3.5e-11
CP000926_0269 1/1 221 280 .. 1 87 [] 40.2 6.2e-11
CP000926_1959 1/1 246 304 .. 1 87 [] 39.8 8.4e-11
CP000926_4381 1/1 362 430 .. 1 87 [] 37.1 4.8e-10
CP000926_2489 1/1 171 239 .. 1 87 [] 36.0 9.8e-10
CP000926_2362 1/1 173 241 .. 1 87 [] 34.3 3e-09
CP000926_1006 1/1 282 325 .. 1 65 [. 33.9 3.7e-09
CP000926_4317 1/1 408 476 .. 1 87 [] 33.9 3.9e-09
CP000926_3525 1/1 153 218 .. 1 87 [] 33.1 6.4e-09
CP000926_4469 1/1 412 502 .. 1 87 [] 32.3 1.1e-08
CP000926_1943 1/1 525 593 .. 1 87 [] 32.1 1.2e-08
CP000926_4201 1/1 238 300 .. 1 87 [] 31.2 2.2e-08
CP000926_2361 1/1 315 383 .. 1 87 [] 30.9 2.7e-08
CP000926_2467 1/1 212 276 .. 1 87 [] 29.5 6.9e-08
CP000926_2354 1/1 241 314 .. 1 87 [] 28.2 1.6e-07

Alignments of top-scoring domains:
CP000926_1243: domain 1 of 1, from 285 to 350: score 101.0, E = 3.8e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTPL++I+g+++lL++ +e+++ q
CP000926_1 285 IKSEFLANMSHEIRTPLNGILGFTHLLQK---------SEMTPRQ-- 320

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ti+++a+ ll +in++Ld+s+ieag
CP000926_1 321 ----------LDYLSTIEKSADNLLGIINEILDFSKIEAG 350

CP000926_3718: domain 1 of 1, from 264 to 329: score 93.0, E = 7.1e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTP+++++g+++lL++ t+ls+eq
CP000926_3 264 AKSDFLAMMSHELRTPMNGVLGMLQLLET---------TPLSSEQ-- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+ ++ +++ +ll+ ind+Ld+srie
CP000926_3 300 ----------ADYTAVASESTGHLLKVINDILDFSRIERA 329

CP000926_4845: domain 1 of 1, from 397 to 462: score 90.7, E = 3.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak efla +sHE+RTP+++++g++elLl t+ls +q
CP000926_4 397 AKAEFLAKISHEIRTPMNGVLGMTELLLG---------TPLSVKQ-- 432

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ti+++++ ll Lin++Ld+s++e+
CP000926_4 433 ----------RDYVQTIHSAGNELLTLINEILDISKLESR 462

CP000926_1441: domain 1 of 1, from 305 to 370: score 89.1, E = 8.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ flan+sHE+RTPL++++g++ l+l+ +l++eq
CP000926_1 305 ARAAFLANMSHEIRTPLNGMLGMIALALD---------NPLPSEQ-- 340

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l +++++++ l +L+nd+Ldls+ +ag
CP000926_1 341 ----------RQQLAIAHDSGKVLVELLNDILDLSKFDAG 370

CP000926_2127: domain 1 of 1, from 480 to 548: score 83.9, E = 2.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++ + +a+lL e+++ ++ls+eq
CP000926_2 480 YKSEFLANMSHELRTPLNSSLILAKLLAENAE------GNLSDEQ-- 518

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ e+i+++++ ll+Lind+Ld+++ eag
CP000926_2 519 ----------VKFAESIYSAGNDLLNLINDILDIAKVEAG 548

CP000926_5333: domain 1 of 1, from 205 to 272: score 83.4, E = 3.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPLt+I gy+e+Ll+++ ++ ++
CP000926_5 205 MRKDFVANVSHELRTPLTVITGYLETLLDNV-------EDVNPRW-- 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ + +++ r++ L+ndlL l+++ea
CP000926_5 243 ----------SRALQQMSQQGSRMQTLLNDLLLLAKLEAT 272

CP000926_2163: domain 1 of 1, from 267 to 332: score 83.1, E = 4.4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL++I+g+aelL+ + l + +
CP000926_2 267 AKSRFLATMSHELRTPLNGILGMAELLRG---------GRLEAAD-- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +e +++++e ll+++n++L ++r+e+g
CP000926_2 303 ----------RQRVEALYKAGEGLLAILNEVLYFARLEEG 332

CP000926_3704: domain 1 of 1, from 651 to 719: score 73.1, E = 3e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +la++sH+LRTPLta+rg ++ Ll+ + ++ ++e+r
CP000926_3 651 LRSALLASVSHDLRTPLTAMRGSIDSLLALG-------EAIPAEDR- 689

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+le ++eaerl+r i++lLd++r+++g
CP000926_3 690 ----------RELLEGTRNEAERLDRYIQNLLDMTRLGHG 719

CP000926_1685: domain 1 of 1, from 232 to 298: score 70.8, E = 1.4e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTPL+ +++++++ l+ ++s e+
CP000926_1 232 RLSAFSADIAHELRTPLSNLLTHTQVTLT---------RPRSLEE-- 267

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l+ l+e++ + ++ind+L l+++++g
CP000926_1 268 ---------YREALHGNLEELQWMAQMINDMLFLAKADHG 298

CP000926_0147: domain 1 of 1, from 368 to 436: score 70.4, E = 1.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+sef+ +sHELRTP+t++ ++ lL+e++ + +++ r
CP000926_0 368 VRSEFVLRASHELRTPVTGMHMAFGLLRERV--------KFPPDARE 406

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++leti +e +rl +LindlL +sr ++g
CP000926_0 407 ----------NDLLETIGEEMQRLTQLINDLLNFSRYQSG 436

CP000926_0356: domain 1 of 1, from 255 to 321: score 69.9, E = 2.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +l HEL+ PL+aIrg++elL+ +++++eqr
CP000926_0 255 YVERYVHTLTHELKSPLAAIRGASELLQG---------DDMPAEQR- 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i+re+erl+++i++lL l+r e+
CP000926_0 292 ----------ARFAGNIERESERLQQMIERLLNLARVEQM 321

CP000926_4362: domain 1 of 1, from 244 to 309: score 66.9, E = 1.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a+++HELRTPL+a+++ +el l+ se+q
CP000926_4 244 RQAQFIADAAHELRTPLAALKARVELGLR-----------SSEPQ-- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+r+ le++ + ++rl +L n+lL l+r e+g
CP000926_4 278 --------EWRQTLESAAQGTDRLTHLANQLLSLARVENG 309

CP000926_0829: domain 1 of 1, from 241 to 307: score 66.6, E = 2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f a+++HELR PLt ++g ++++l+ +s+e+
CP000926_0 241 RLEAFNADVAHELRSPLTNLIGQTQVALT---------RGRSAEH-- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y e l++ l+e+erl+++ind+L l+ +++g
CP000926_0 277 ---------YFEVLQSNLEELERLRSIINDMLFLASADQG 307

CP000926_2510: domain 1 of 1, from 598 to 664: score 65.4, E = 4.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fla++sHE+RTP++a++g++e++l + ++
CP000926_2 598 TKSTFLATMSHEIRTPMNAVIGLLEMALV---------DSRGGRCD- 634

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+t++++a ll+Li d+Ld+srie+g
CP000926_2 635 ----------TQTLQTAHDSAIGLLELIGDILDISRIESG 664

CP000926_5068: domain 1 of 1, from 132 to 197: score 65.0, E = 5.8e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++l+HE+++PL +Irg+a+lL + el+ee +
CP000926_5 132 TTKMLVRGLAHEIKNPLGGIRGAAQLLAR----------ELPEEGL- 167

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y+++i++ea+rl++L++++L ++ +
CP000926_5 168 ----------RDYTNVIIEEADRLRNLVDRMLGSNKLPSL 197

CP000926_2969: domain 1 of 1, from 170 to 235: score 64.7, E = 7.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++a +sH+L++PLtaI++++elL + +e+ e +
CP000926_2 170 FAEQMIAIASHDLKNPLTAIKMASELLGR---------GERRERE-- 205

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ i +++er +r+i dlLdl+ + g
CP000926_2 206 ----------QKLLSNIVSSSERAQRMIADLLDLASVRIG 235

CP000926_0020: domain 1 of 1, from 238 to 304: score 63.1, E = 2.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTP++ +++++e+ l+ +++ +
CP000926_0 238 RLSNFSADIAHELRTPVSNLLTHTEVVLT---------KKRDLDA-- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++ l + l++++r++r+i+d+L l+++++g
CP000926_0 274 ---------YEDNLYSNLEDLKRMSRMIDDMLFLAKADNG 304

CP000926_4803: domain 1 of 1, from 418 to 483: score 62.7, E = 2.6e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla++ HELRTP+++++g +el+ + ++ +e
CP000926_4 418 LKDEFLASVTHELRTPMNGVIGSLELMHT---------LPMEAEM-- 453

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y +t+ +a+ + ++++ +L+ls ++ag
CP000926_4 454 ----------AQYHRTAAGSAQGMMDMVDAILTLSELQAG 483

CP000926_3907: domain 1 of 1, from 184 to 252: score 61.8, E = 4.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+l+H++RTPL+a ++ya+ L + +++ls+e+r
CP000926_3 184 SLGRMVASLAHQIRTPLSAAMLYASHLAD-------DEPALSAETR- 222

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ t+++ ++ l+++++d+L ++r e +
CP000926_3 223 ----------QRFAATLKERLHELEHQVRDMLVFARGELP 252

CP000926_1283: domain 1 of 1, from 796 to 863: score 61.3, E = 6.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+++ +L ++ + ++ee
CP000926_1 796 SKTRFLAAVSHDLMQPLNAARLFSAALSQQA-------EGMNEEA-- 833

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ +++++++ ++Li+dlLd+sr+e+g
CP000926_1 834 ----------QQLVQHMDSSLRSAEELISDLLDISRLENG 863

CP000926_4206: domain 1 of 1, from 308 to 373: score 61.2, E = 6.8e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e+++++sHELRTP++ +r+ +e+++ + +e+ r
CP000926_4 308 MQRELVRAVSHELRTPVARLRFGLEMIES----------ATTEQAR- 343

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l ++ +++ l++L++++L+++r+e+g
CP000926_4 344 ----------AKHLAGMDGDIQDLDKLVDEMLTYARLEQG 373

CP000926_4342: domain 1 of 1, from 240 to 306: score 60.7, E = 1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f +l+HELRTPL+ ++g +++ l+ e++
CP000926_4 240 QLSQFSDDLAHELRTPLSNLMGKTQVTLA---------RERDNAN-- 275

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre le ++e+ rl+r+ind+L l++ ++
CP000926_4 276 ---------YREVLEDSIEELTRLNRIINDMLFLAQVNQP 306

CP000926_2994: domain 1 of 1, from 1002 to 1070: score 60.6, E = 1.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef+a +sHEL+ PL+ I+++a++L++ ++ +
CP000926_2 1002 MKDEFFAVMSHELKHPLNLIQLNADILRR-----------IPSVTST 1037

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +++++i++++ + r+i+dlLd +ri++g
CP000926_2 1038 GMA-------SKAVNVIREAVTSQARIIDDLLDVARIRTG 1070

CP000926_1629: domain 1 of 1, from 710 to 770: score 59.7, E = 1.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP++a++g++el+ + +++++ +
CP000926_1 710 AKSTFLATISHEIRTPMNAVIGMLELAVK--------RADQGRVD-- 746

peLRledpeyreyletilreaerllrLindlLdl<-*
r +le ++++a+ ll Li d+Ld+
CP000926_1 747 ----------RSALELAHHSAKDLLGLIGDILDM 770

CP000926_3985: domain 1 of 1, from 228 to 292: score 59.1, E = 2.8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l+++sHELR PL+ +r ++ l+++ +++eqr
CP000926_3 228 SQRQLLRDVSHELRSPLARLRIALALAER-----------AGPEQR- 262

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++ re +rl++Li+++L l+r +a+
CP000926_3 263 ----------ETLWPRLTRECDRLEDLISEILALARVDAE 292

CP000926_2556: domain 1 of 1, from 201 to 263: score 59.0, E = 3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ +l ++sHELR PLt + +++ l++ ++r
CP000926_2 201 AQQNLLHDISHELRSPLTRMHAAIGLMRQ-------------QPDR- 233

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le+++re++r+++Li++lL+l+r++a
CP000926_2 234 ----------HDMLERVERESRRMDDLIEQLLTLARAQAR 263

CP000926_4455: domain 1 of 1, from 211 to 277: score 58.6, E = 3.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPL ++ + +elL e+ ++l++
CP000926_4 211 RERLFTSDVSHELRTPLMVLATSCELLMEN--------PNLDARA-- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +e++ r++e +++L+ +L l+r++
CP000926_4 248 ----------RSQVERVARATEEMRELVKTFLMLARAQRD 277

CP000926_0044: domain 1 of 1, from 241 to 307: score 58.4, E = 4.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f +l+HELR PL+ ++g a+++l+ e+s +
CP000926_0 241 QLSQFSDDLAHELRAPLSNLMGKAQVALT---------RERSLSE-- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre le+ +e++r++r+++d+L l++ ++
CP000926_0 277 ---------YREVLESCTEELDRMSRMVSDMLFLAQVSHP 307

CP000926_2582: domain 1 of 1, from 230 to 295: score 54.1, E = 7.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a+++HELRTPLta+++ +e L+ +++++
CP000926_2 230 SQKRFVADAAHELRTPLTALSLQVEGLEP---------EAMTARA-- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++ + r ++Li++lL l+ ++ g
CP000926_2 266 ----------QAQVAQLRLGIARSRKLIEQLLALASAQLG 295

CP000926_2241: domain 1 of 1, from 361 to 427: score 54.0, E = 7.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt Ir ++ L++ ++l+e+ r
CP000926_2 361 AIGQLTGGVAHDFNNLLTIIRSSLHFLQR---------PDLDEKRR- 397

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++t+ + ++r +L +lL ++r +a
CP000926_2 398 ----------ERYIKTMSDTVDRGAKLTGQLLAFARRQAL 427

CP000926_0293: domain 1 of 1, from 253 to 311: score 53.0, E = 1.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k fla++sH+LRTPLt +r+ +e L +
CP000926_0 253 DKAYFLAAVSHDLRTPLTRMRLRLERLPD------------------ 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +++++ + +++++i ++Ld+ r++++
CP000926_0 282 ----------DEHRQRLRQNITQMDDMIGQVLDYLRAGEQ 311

CP000926_3096: domain 1 of 1, from 195 to 260: score 51.8, E = 3.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++ la++sH+L +PL+a r+++++L+e +l+e +
CP000926_3 195 SKDKYLAAASHDLLQPLNAARLLISTLRE---------RPLPEAE-- 230

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++e+ ++++e ++L+ dlLd+sr+++
CP000926_3 231 ----------HVLVERTHQALEGAEDLLTDLLDISRLDQA 260

CP000926_3115: domain 1 of 1, from 267 to 332: score 51.1, E = 5.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+++++Lle + ++ +
CP000926_3 267 SKTKFLAAVSHDLLQPLNAARLFTSALLE----------RREPQNA- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + ++++ ++L+ l d+s+++ag
CP000926_3 303 ----------GHLVRNVSNSLQDVENLLGTLVDISKLDAG 332

CP000926_2964: domain 1 of 1, from 150 to 216: score 50.1, E = 9.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ l l H+LR PL a++++ +l+l+ ++ +e++
CP000926_2 150 TRKMVLGVLGHDLRSPLGAVLMAGDLILR---------QDGLDEKT- 186

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y + ++ +a+r++++++dlLdl+r g
CP000926_2 187 ----------RVYASQVHTSAKRCSHMVDDLLDLARCNLG 216

CP000926_3765: domain 1 of 1, from 224 to 288: score 49.6, E = 1.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++HELR PLtaI+++++++++ + ++
CP000926_3 224 RERRLTDDAAHELRSPLTAIKTHLQVARM----------TDGAVR-- 258

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le +++ ++r+ r +++lL l+r e
CP000926_3 259 ----------EQALEHAEQGTDRMHRTLEQLLMLARVEGS 288

CP000926_2130: domain 1 of 1, from 168 to 241: score 49.4, E = 1.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f++ +sHE RTPL+++++ ++l ++ l + + ++ s +++
CP000926_2 168 MRDDFMSIVSHEVRTPLNGLILETQLRKMHLAR--GNLAAFSGDKL- 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++e+ +r++++l rLi+d+Ld sri++g
CP000926_2 212 ----------QAMVERDERQINSLIRLIEDMLDVSRIRTG 241

CP000926_0573: domain 1 of 1, from 232 to 291: score 48.2, E = 3.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l++lsHELRTPL+ +r + + +l+++q+
CP000926_0 232 QQRLLLRTLSHELRTPLARLRIAHDS-------------DLPPPQL- 264

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++re+ +++L++d Ldl++++++
CP000926_0 265 -------------RERLDREVADMQKLLEDTLDLAWMDTE 291

CP000926_1245: domain 1 of 1, from 233 to 292: score 44.5, E = 3.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l++lsHE+RTPL+ +r +++ +
CP000926_1 233 MQQQLLRDLSHEMRTPLSRLRVACDGETD------------------ 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e++ re++ +++L++ L+l++ +a+
CP000926_1 262 ---------LQRLRERLTREVDCMQQLVEGTLQLAWQDAE 292

CP000926_2502: domain 2 of 2, from 272 to 336: score 44.1, E = 4.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e ++++H LR+PL++Ir ael+++ +e +
CP000926_2 272 ALGEVSSAVAHSLRNPLASIRSSAELAQA-----------FDEGPA- 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ i+++++r+++ i+++L+ r +
CP000926_2 307 ----------QRQVNDIINQVDRMSQWIRQMLQSLRPLND 336

CP000926_2488: domain 1 of 1, from 337 to 405: score 43.6, E = 6.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ ++ HE+++ L++I g +elL+++l ++ e +
CP000926_2 337 VVGQLAGGMGHEMNNLLSGIGGSLELLQRRL-------QDGRLERV- 375

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y+e+++++++r +L +lL +sr +
CP000926_2 376 ----------EAYVEVARDSVQRAMELTHRLLAFSRHQPL 405

CP000926_1941: domain 1 of 1, from 427 to 495: score 43.6, E = 7.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++a+++H++++ Lt+I++ a+ L+++l ++++ +++
CP000926_1 427 AVGQLTAGVAHDFNNLLTVILTGASFLERDL-------AKADLDKA- 465

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l i++++er +L ++lL +sr +
CP000926_1 466 ----------RTRLTHIREAGERGAKLTSQLLAFSRRQRL 495

CP000926_2503: domain 1 of 1, from 272 to 336: score 42.8, E = 1.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e+ ++++H LR+PL+ Ir ael++e +++
CP000926_2 272 ALGEMSSAVAHSLRNPLANIRSSAELAQE----------IANPAA-- 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + i+++++r++r ++dlL r +
CP000926_2 307 ----------QKNITDIISQVDRMSRWVRDLLVSLRPVSD 336

CP000926_4664: domain 1 of 1, from 756 to 822: score 42.6, E = 1.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+ +P+t+I +a+ L+e + e + e +
CP000926_4 756 SIGRLAAGVAHEIGNPITGIACLAQNLRE--------EREGDGEII- 793

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + il++++r +r+++ l+ ++ ++
CP000926_4 794 -----------ELSSQILDQTKRVSRIVQSLMSFAHAGGS 822

CP000926_0286: domain 1 of 1, from 370 to 438: score 41.1, E = 3.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + a++sHEL++PL+aIr yae ++ ld + ++e+
CP000926_0 370 VLGTMSASISHELNQPLAAIRSYAENAEILLD------HQRTEDA-- 408

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l+ i + + r+ ++i l+ ++r +
CP000926_0 409 ----------RGNLKLIGELTGRMASIIAHLRAFARRDRH 438

CP000926_0269: domain 1 of 1, from 221 to 280: score 40.2, E = 6.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +r+ ++lL +
CP000926_0 221 ERELMLAGVSHDLRTPLTRLRLSLSLLNSD----------------- 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + + r++e ++++++++L + r +
CP000926_0 251 ----------SDLSDDMVRDIEDMDAILDQFLAFIRDGRD 280

CP000926_1959: domain 1 of 1, from 246 to 304: score 39.8, E = 8.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++la++sH+LR PLt +r+ ae +++
CP000926_1 246 DRTQMLAAISHDLRAPLTRMRLRAEFIED------------------ 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++ ++++ ++++++ L + r +a
CP000926_1 275 ----------AQLQAKLFKDVDEMQAMVDAALVFFRDDAR 304

CP000926_4381: domain 1 of 1, from 362 to 430: score 37.1, E = 4.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++++ a+++HE+++PLt+ r+ +e+L+ ld + + +e
CP000926_4 362 ALGQMSAAMAHEINQPLTTQRMQLETLRLLLD------HGRHDEA-- 400

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++le +++ + r+ +L + l +++r
CP000926_4 401 ----------RQALEPLEQMLTRMAALTSHLKTFARNSPV 430

CP000926_2489: domain 1 of 1, from 171 to 239: score 36.0, E = 9.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g el++++l+ + +s+
CP000926_2 171 AIGQLAGGVAHDFNNLLTSIGGSFELIERRLY------QGRSDGL-- 209

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ ++++ r rL +lL +s ++
CP000926_2 210 ----------DGVLSMGREAVARAARLTHRLLAFSSRQSL 239

CP000926_2362: domain 1 of 1, from 173 to 241: score 34.3, E = 3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L +++g++el++ +l ++ + +++
CP000926_2 173 AVGQLTGGIAHDFNNLLGSLLGALELAEQRL------REQRHADT-- 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le ++ + r ++++lL +sr ++
CP000926_2 212 ----------ARMLELCRNTTIRAATQVQRLLAFSRQQTL 241

CP000926_1006: domain 1 of 1, from 282 to 325: score 33.9, E = 3.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s++++++sH+LRTP+t +r+ +elL++ + l ++
CP000926_1 282 ERSQLFSAISHDLRTPITRLRLRVELLED---------ERLQAKF-- 317

peLRledpeyreyletil<-*
+ l+ ++
CP000926_1 318 ----------SQDLDELE 325

CP000926_4317: domain 1 of 1, from 408 to 476: score 33.9, E = 3.9e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ +++HEL++PL+a+r+++ ++l + e++
CP000926_4 408 AIGQMSTSIAHELNQPLAALRTLSGNTVRFL-------ERGALETA- 446

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+t+ + ++r+ r+ l+ ++r +
CP000926_4 447 ----------SANLRTMNDLIDRMGRITASLRSFARRGDD 476

CP000926_3525: domain 1 of 1, from 153 to 218: score 33.1, E = 6.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +l+H++++ Lt I+ a l+l+ t +
CP000926_3 153 ALGQLTGGLAHDFNNMLTIIISSARLALA---------TQDPLRA-- 188

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ il++++r +L ++lL ++r +
CP000926_3 189 ----------QRMLQHILDAGQRGTELTQQLLSFARHRKL 218

CP000926_4469: domain 1 of 1, from 412 to 502: score 32.3, E = 1.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++a+++HE+++PL aI+ +++ ++++l +t+l+ q
CP000926_4 412 SVGGLAAGMAHEINNPLGAILHNVQNIRRRL------STDLPRNQ-- 450

peLRl................edpeyreyletilreaerllrLindlLdl
++ ++ + + + ++ +e+ ++l+ i +++ r +++ +L +
CP000926_4 451 ----EqaqelgidlatvnrylDSREVPQLLDGIAQAGARAAKIVTHMLSF 496

srieag<-*
sr +
CP000926_4 497 SRRSNR 502

CP000926_1943: domain 1 of 1, from 525 to 593: score 32.1, E = 1.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL I gy+elL e +++ +e
CP000926_1 525 ELEAFSYSVSHDLRAPLRHIAGYTELLGE-------IEGQDLSERG- 563

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ i ++a+ +L+++lL +s+++
CP000926_1 564 ----------KRFLQHIGEAAHFAGSLVDNLLNFSQMGRS 593

CP000926_4201: domain 1 of 1, from 238 to 300: score 31.2, E = 2.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++ l +l+H L+TPL++++g e L+ ++ +e
CP000926_4 238 RYRDSLDDLAHSLKTPLAVLQGVGESLQQRS-------GE------- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re +++++++er++++i+ L+ + ++
CP000926_4 271 ----------REQARVLQSQIERMSQQIDYQLQRASLRKS 300

CP000926_2361: domain 1 of 1, from 315 to 383: score 30.9, E = 2.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ +++H++++ L +I+g+ el++ +l ++ r
CP000926_2 315 AVGQLSGGIAHDFNNLLGGILGAQELMRQRL-----------DQSRF 350

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++L + +le +a+ ++L+ +lL +sr ++
CP000926_2 351 DAL-------EPLLELSSGSAQLASSLVHRLLAFSRQQTL 383

CP000926_2467: domain 1 of 1, from 212 to 276: score 29.5, E = 6.9e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e+l ++sHELRTPLt + + + lL + e ++
CP000926_2 212 QQRELLNAVSHELRTPLTRLDFGLVLLFD----------EVPPAS-- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l + ++ l++L+ +lL +sr+ +
CP000926_2 247 ----------RKRLLELVGHVRELDELVLELLSYSRLYNA 276

CP000926_2354: domain 1 of 1, from 241 to 314: score 28.2, E = 1.6e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++++++HE+++PL+a+ ya + +++l ++ + + + +r
CP000926_2 241 TLGELASGIAHEINQPLAAVVNYANASQRYL---QGLERDPQARERV 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + l++i ++a + + i++l+ + r +
CP000926_2 285 GQG----------LQRISEQATHAAEVIRRLRAFLRKGPR 314


Histogram of all scores:
score obs exp (one = represents 18 sequences)
----- --- ---
-14 13 0|=
-13 36 4|*=
-12 195 123|======*====
-11 446 641|========================= *
-10 799 1189|============================================= *
-9 1039 1228|==========================================================*
-8 1006 919|===================================================*====
-7 723 579|================================*========
-6 487 333|==================*=========
-5 242 182|==========*===
-4 161 97|=====*===
-3 81 51|==*==
-2 45 27|=*=
-1 26 14|*=
0 22 7|*=
1 10 3|*
2 8 2|*
3 3 1|*
4 1 0|=
5 1 0|=
6 1 0|=
7 1 0|=
8 0 0|
9 0 0|
> 10 63 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 498.7868
P(chi-square) = 0

Total sequences searched: 5409

Whole sequence top hits:
tophits_s report:
Total hits: 58
Satisfying E cutoff: 58
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 58
Satisfying E cutoff: 58
Total memory: 44K


Acknowledgements:

This research is funded by:

Developed by: