Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
132 projects found  

3 accessions found for Caulobacter sp. K31  

Data for CP000927  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000927.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000927_2536 CDS_2766059-2763963 97.3 3.8e-27 1
CP000927_0845 CDS_904702-907281 93.7 4.1e-26 1
CP000927_1230 CDS_1299695-1301434 92.9 6.9e-26 1
CP000927_3758 CDS_4086727-4084595 92.5 8.6e-26 1
CP000927_3420 CDS_3712006-3714540 91.8 1.4e-25 1
CP000927_2953 CDS_3221341-3219398 91.7 1.5e-25 1
CP000927_0715 CDS_777436-780084 89.3 7.3e-25 1
CP000927_0615 CDS_686313-684376 88.3 1.4e-24 1
CP000927_1255 CDS_1324148-1322085 87.3 2.6e-24 1
CP000927_2528 CDS_2755063-2753399 87.1 3e-24 1
CP000927_2779 CDS_3028749-3030527 86.5 4.4e-24 1
CP000927_0654 CDS_727609-729321 85.7 7.3e-24 1
CP000927_4453 CDS_4845369-4847252 85.7 7.7e-24 1
CP000927_0988 CDS_1056019-1053521 84.7 1.5e-23 1
CP000927_4707 CDS_5114041-5112197 84.6 1.6e-23 1
CP000927_3537 CDS_3826896-3832724 83.9 2.4e-23 1
CP000927_3732 CDS_4057280-4059454 79.8 3.5e-22 1
CP000927_4533 CDS_4928154-4926712 79.3 4.8e-22 1
CP000927_0804 CDS_866994-865009 79.1 5.7e-22 1
CP000927_1967 CDS_2123001-2124605 78.5 8.4e-22 1
CP000927_0190 CDS_210614-209019 77.6 1.5e-21 1
CP000927_0046 CDS_56597-59302 76.9 2.3e-21 1
CP000927_1306 CDS_1389239-1387518 76.7 2.7e-21 1
CP000927_3682 CDS_3986099-3987907 76.5 3.1e-21 1
CP000927_4442 CDS_4828671-4830494 74.2 1.4e-20 1
CP000927_3955 CDS_4298188-4296608 73.6 2e-20 1
CP000927_4816 CDS_5231050-5233362 71.6 7.7e-20 1
CP000927_1229 CDS_1299485-1298622 70.4 1.6e-19 1
CP000927_3515 CDS_3804406-3801899 69.6 2.8e-19 1
CP000927_4741 CDS_5145599-5143818 65.5 4.1e-18 1
CP000927_2684 CDS_2929895-2927202 64.6 7.2e-18 1
CP000927_4223 CDS_4609137-4606453 64.1 1e-17 1
CP000927_4611 CDS_5008666-5006987 61.1 7.2e-17 1
CP000927_4334 CDS_4727490-4728842 53.9 7.9e-15 1
CP000927_2594 CDS_2825708-2826838 50.4 7.6e-14 1
CP000927_3538 CDS_3832726-3834834 48.7 2.3e-13 1
CP000927_2413 CDS_2645665-2647089 46.9 7.5e-13 1
CP000927_2596 CDS_2828399-2830642 46.9 7.5e-13 1
CP000927_4289 CDS_4680208-4682628 46.8 7.9e-13 1
CP000927_2958 CDS_3225464-3223560 42.8 1.1e-11 1
CP000927_0626 CDS_700064-698559 42.5 1.3e-11 1
CP000927_3657 CDS_3963653-3961692 40.1 6.1e-11 1
CP000927_4633 CDS_5028351-5026951 36.7 5.9e-10 1
CP000927_2334 CDS_2544062-2542533 36.6 6e-10 1
CP000927_3287 CDS_3573516-3570748 33.9 3.6e-09 1
CP000927_3561 CDS_3856019-3857824 33.8 3.9e-09 1
CP000927_3276 CDS_3554349-3555788 32.9 7.1e-09 1
CP000927_1377 CDS_1469920-1472007 31.6 1.6e-08 1
CP000927_1578 CDS_1674570-1673086 26.9 3.5e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000927_2536 1/1 324 389 .. 1 87 [] 97.3 3.8e-27
CP000927_0845 1/1 465 530 .. 1 87 [] 93.7 4.1e-26
CP000927_1230 1/1 322 390 .. 1 87 [] 92.9 6.9e-26
CP000927_3758 1/1 320 385 .. 1 87 [] 92.5 8.6e-26
CP000927_3420 1/1 602 671 .. 1 87 [] 91.8 1.4e-25
CP000927_2953 1/1 275 340 .. 1 87 [] 91.7 1.5e-25
CP000927_0715 1/1 403 468 .. 1 87 [] 89.3 7.3e-25
CP000927_0615 1/1 263 328 .. 1 87 [] 88.3 1.4e-24
CP000927_1255 1/1 320 386 .. 1 87 [] 87.3 2.6e-24
CP000927_2528 1/1 317 382 .. 1 87 [] 87.1 3e-24
CP000927_2779 1/1 206 271 .. 1 87 [] 86.5 4.4e-24
CP000927_0654 1/1 199 264 .. 1 87 [] 85.7 7.3e-24
CP000927_4453 1/1 247 312 .. 1 87 [] 85.7 7.7e-24
CP000927_0988 1/1 459 525 .. 1 87 [] 84.7 1.5e-23
CP000927_4707 1/1 248 313 .. 1 87 [] 84.6 1.6e-23
CP000927_3537 1/1 1249 1317 .. 1 87 [] 83.9 2.4e-23
CP000927_3732 1/1 322 388 .. 1 87 [] 79.8 3.5e-22
CP000927_4533 1/1 205 272 .. 1 87 [] 79.3 4.8e-22
CP000927_0804 1/1 278 343 .. 1 87 [] 79.1 5.7e-22
CP000927_1967 1/1 164 229 .. 1 87 [] 78.5 8.4e-22
CP000927_0190 1/1 13 75 .. 4 87 .] 77.6 1.5e-21
CP000927_0046 1/1 527 592 .. 1 87 [] 76.9 2.3e-21
CP000927_1306 1/1 191 256 .. 1 87 [] 76.7 2.7e-21
CP000927_3682 1/1 222 287 .. 1 87 [] 76.5 3.1e-21
CP000927_4442 1/1 213 279 .. 1 87 [] 74.2 1.4e-20
CP000927_3955 1/1 314 382 .. 1 87 [] 73.6 2e-20
CP000927_4816 1/1 541 607 .. 1 87 [] 71.6 7.7e-20
CP000927_1229 1/1 49 118 .. 1 87 [] 70.4 1.6e-19
CP000927_3515 1/1 460 525 .. 1 87 [] 69.6 2.8e-19
CP000927_4741 1/1 223 288 .. 1 87 [] 65.5 4.1e-18
CP000927_2684 1/1 665 733 .. 1 87 [] 64.6 7.2e-18
CP000927_4223 1/1 662 730 .. 1 87 [] 64.1 1e-17
CP000927_4611 1/1 307 372 .. 1 87 [] 61.1 7.2e-17
CP000927_4334 1/1 246 304 .. 1 87 [] 53.9 7.9e-15
CP000927_2594 1/1 136 200 .. 1 87 [] 50.4 7.6e-14
CP000927_3538 1/1 311 377 .. 1 87 [] 48.7 2.3e-13
CP000927_2413 1/1 246 304 .. 1 87 [] 46.9 7.5e-13
CP000927_2596 1/1 506 577 .. 1 87 [] 46.9 7.5e-13
CP000927_4289 1/1 429 495 .. 1 87 [] 46.8 7.9e-13
CP000927_2958 1/1 406 477 .. 1 87 [] 42.8 1.1e-11
CP000927_0626 1/1 267 338 .. 1 87 [] 42.5 1.3e-11
CP000927_3657 1/1 281 347 .. 1 87 [] 40.1 6.1e-11
CP000927_4633 1/1 238 294 .. 1 78 [. 36.7 5.9e-10
CP000927_2334 1/1 282 353 .. 1 87 [] 36.6 6e-10
CP000927_3287 1/1 548 616 .. 1 87 [] 33.9 3.6e-09
CP000927_3561 1/1 217 283 .. 1 87 [] 33.8 3.9e-09
CP000927_3276 1/1 239 297 .. 1 87 [] 32.9 7.1e-09
CP000927_1377 1/1 312 378 .. 1 87 [] 31.6 1.6e-08
CP000927_1578 1/1 291 348 .. 1 87 [] 26.9 3.5e-07

Alignments of top-scoring domains:
CP000927_2536: domain 1 of 1, from 324 to 389: score 97.3, E = 3.8e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTPL++++g+a+++++ + l++++
CP000927_2 324 AKSQFLANMSHEIRTPLNGVLGMAQVMER---------SGLGSPH-- 359

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l++i++++e ll+++nd+Ldls+ieag
CP000927_2 360 ----------REHLKIIRDSGETLLAILNDVLDLSKIEAG 389

CP000927_0845: domain 1 of 1, from 465 to 530: score 93.7, E = 4.1e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla +sHELRTPL++++g+a++L++ ++l++ q
CP000927_0 465 AKSAFLAVMSHELRTPLNGMLGMAQALRT---------EDLDARQ-- 500

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re +e ++++++ ll L+nd+Ldls+ieag
CP000927_0 501 ----------REQVELMIDSGDTLLVLLNDILDLSKIEAG 530

CP000927_1230: domain 1 of 1, from 322 to 390: score 92.9, E = 6.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +flan+sHELRTPL+aI+g++++++++++ ++l++
CP000927_1 322 GRARFLANMSHELRTPLNAIMGFSDIMRARMF------GPLTDRY-- 360

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey e i++++++ll+Lind+Ld+s+iea+
CP000927_1 361 ----------GEYAELIHESGRHLLDLINDVLDMSKIEAE 390

CP000927_3758: domain 1 of 1, from 320 to 385: score 92.5, E = 8.6e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTPL++++g + +L t l++ q
CP000927_3 320 AKSDFLANMSHEIRTPLNGVIGVVAALGQ---------TGLTPAQ-- 355

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ i++++e l+rL++d+Ld s+ieag
CP000927_3 356 ----------REMVDLIQSSGETLERLVSDILDVSKIEAG 385

CP000927_3420: domain 1 of 1, from 602 to 671: score 91.8, E = 1.4e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL+aI g++e++ +e++ ++l+++
CP000927_3 602 AKSEFLANMSHELRTPLNAINGFSEIMMNEMF------GPLGDQR-- 640

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ y i++++++ll+Lind+Ld+s+ieag
CP000927_3 641 ---------YKGYSLDIHNSGQHLLALINDILDMSKIEAG 671

CP000927_2953: domain 1 of 1, from 275 to 340: score 91.7, E = 1.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHE+RTPL++++g+a++++ ++l++ q
CP000927_2 275 AKSEFLATMSHEIRTPLNGVLGMAQAMEL---------DPLPPVQ-- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l++i+++++ ll++++d+Ldls+ieag
CP000927_2 311 ----------RDRLSVIRESGQALLAILDDVLDLSKIEAG 340

CP000927_0715: domain 1 of 1, from 403 to 468: score 89.3, E = 7.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fla++sHE+RTP++a++g a+lL + t+l++eq
CP000927_0 403 TKSDFLASMSHEIRTPMNAVMGIADLLAK---------TALTPEQ-- 438

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y+++ +r+++ ll+Lind+Ldls+ ea
CP000927_0 439 ----------DKYVQIFRRSGDNLLNLINDILDLSKVEAS 468

CP000927_0615: domain 1 of 1, from 263 to 328: score 88.3, E = 1.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTPL++I + a++L + +el++
CP000927_0 263 AKSTFLANMSHEIRTPLNGIVAGADILAR---------SELTPRV-- 298

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++++i+ ++++l+rL++++Ldl rieag
CP000927_0 299 ----------RELVDIIQTSGKSLERLLSEVLDLVRIEAG 328

CP000927_1255: domain 1 of 1, from 320 to 386: score 87.3, E = 2.6e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHE+RTPL++++g+++lL e +++l+++
CP000927_1 320 AKTEFLATMSHEIRTPLNSMLGFSQLLVE--------RQDLPADA-- 356

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l i++++ ll +nd+Ld+sr eag
CP000927_1 357 ----------RRHLALIDSAGTALLTVVNDILDFSRVEAG 386

CP000927_2528: domain 1 of 1, from 317 to 382: score 87.1, E = 3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++flan+sHE+RTPL++++g+a++++ ++ls+ q
CP000927_2 317 AKTQFLANMSHEIRTPLNGVLGMAQIMES---------DALSDRQ-- 352

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l +i+++++ ll+L+n +Ld++r+e+g
CP000927_2 353 ----------RERLAVIEESGNALLALLNSILDMARLETG 382

CP000927_2779: domain 1 of 1, from 206 to 271: score 86.5, E = 4.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTPL++++g+++++++ + ls+ q
CP000927_2 206 AKTTFLATMSHEIRTPLNGVLGMLQVMQA---------DGLSDLQ-- 241

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re le++++++e l +++nd+Ldls+ieag
CP000927_2 242 ----------RERLEIVRKSGEGLTAILNDVLDLSKIEAG 271

CP000927_0654: domain 1 of 1, from 199 to 264: score 85.7, E = 7.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHELRTP+++++g+a++L t l++ q
CP000927_0 199 AKSAFLAMMSHELRTPMNGVLGMAHALGS---------TQLDARQ-- 234

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+eti ++++ l +++nd+Ldls+iea
CP000927_0 235 ----------ADYVETIVQSGDGLMAILNDILDLSKIEAR 264

CP000927_4453: domain 1 of 1, from 247 to 312: score 85.7, E = 7.7e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+++++++e++ + +els+ q
CP000927_4 247 LKSHFLANMSHEIRTPLNGVLAMTEVMAM---------GELSAAQ-- 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l++i+++++ ll+ +nd+Ldls+ieag
CP000927_4 283 ----------RERLSVIRESGDLLLSVLNDVLDLSKIEAG 312

CP000927_0988: domain 1 of 1, from 459 to 525: score 84.7, E = 1.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+eflan+sHELRTPLt+++g+a l + +++ls++
CP000927_0 459 VKGEFLANMSHELRTPLTSVLGFARLVDN--------EPDLSPDA-- 495

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++++++l+ ++ ll ind+Ld+s++eag
CP000927_0 496 ----------RRFISRVLSGGKALLTTINDILDFSKLEAG 525

CP000927_4707: domain 1 of 1, from 248 to 313: score 84.6, E = 1.6e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL+aI+g +lL + ++l++ q
CP000927_4 248 AKSQFLATVSHEMRTPLNAILGEGQLLAR---------EALTPSQ-- 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l++i+ +++ +++Li+d+Ld+s+ieag
CP000927_4 284 ----------RSRLQVIDTASRAMRHLIDDVLDISQIEAG 313

CP000927_3537: domain 1 of 1, from 1249 to 1317: score 83.9, E = 2.4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ ++++L e++ ++ls++q
CP000927_3 1249 YKSEFLANMSHELRTPLNSLLILSKMLSENAQ------GNLSDKQ-- 1287

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + i++++ ll Lind+Ldls+ie+g
CP000927_3 1288 ----------VEFSKNIHSAGTDLLGLINDILDLSKIESG 1317

CP000927_3732: domain 1 of 1, from 322 to 388: score 79.8, E = 3.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL++I+g+a l e d+ l +e
CP000927_3 322 AKSDFLATMSHEIRTPLNSILGFAALVGE--------DPGLAPEN-- 358

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l + +++++l +++ndlLd+++ eag
CP000927_3 359 ----------RRRLGLVVSAGRSLAEIVNDLLDFAKVEAG 388

CP000927_4533: domain 1 of 1, from 205 to 272: score 79.3, E = 4.8e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +flan+sHELRTPL++++g++e+L+ +++++ ++
CP000927_4 205 TRADFLANASHELRTPLASLSGFIETLRG---------HAKDDVGAR 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +++ +aer+ rLi+dl+ lsrie +
CP000927_4 243 ----------DKFLGIMQAQAERMARLIDDLMSLSRIELN 272

CP000927_0804: domain 1 of 1, from 278 to 343: score 79.1, E = 5.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +flan+sHE+RTP+++++g +lL++ ++ls++
CP000927_0 278 AKAQFLANMSHEIRTPMNGVLGVMHLLKR---------EKLSADG-- 313

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l +l ++ l++L+nd+ d+s+ieag
CP000927_0 314 ----------RQLLTEALGCGAMLSELLNDIIDFSKIEAG 343

CP000927_1967: domain 1 of 1, from 164 to 229: score 78.5, E = 8.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks la +sHE+RTPL++++g+++++ + el++ q
CP000927_1 164 AKSAYLAFMSHEIRTPLNGLLGMVQVMAA---------NELNDGQ-- 199

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l +++r+++ ll+ +nd+Ldls+ieag
CP000927_1 200 ----------QRRLGIVERSGRNLLSVLNDILDLSKIEAG 229

CP000927_0190: domain 1 of 1, from 13 to 75: score 77.6, E = 1.5e-21
*->eflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeL
e la+lsHE+RTPL++++g+a lL+ t l++eq
CP000927_0 13 EQLATLSHEFRTPLNGVLGMARLLEG---------TRLTAEQ----- 45

RledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+ +++++++ll+L+nd+Ld++r++a
CP000927_0 46 -------RAYVGALRESGDHLLSLVNDVLDFARLGAT 75

CP000927_0046: domain 1 of 1, from 527 to 592: score 76.9, E = 2.3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +flan+sHE+RTP+++++g +lL++ ++l+ +
CP000927_0 527 AKAQFLANMSHEIRTPMNGVLGVMHLLKR---------EKLPGDA-- 562

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l +l +++ l+ L++d+ d+srieag
CP000927_0 563 ----------DHLLGEALACGRMLSTLLDDVIDFSRIEAG 592

CP000927_1306: domain 1 of 1, from 191 to 256: score 76.7, E = 2.7e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a sHELRTP+++++g+a +L + ++l+e q
CP000927_1 191 AKSTFVAVTSHELRTPMNGLLGMAYALDR---------SNLNEAQ-- 226

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ +++++++l + +nd+Ldls+ieag
CP000927_1 227 ----------RRHVRLMIKSGDSLMQVLNDVLDLSKIEAG 256

CP000927_3682: domain 1 of 1, from 222 to 287: score 76.5, E = 3.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efl ++sHE+RTPL++++g+a+++++ ++ls+ q
CP000927_3 222 VKTEFLETMSHEIRTPLNGVLGMAQAMER---------DTLSARQ-- 257

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l i++++ ll+ in +Ld+srieag
CP000927_3 258 ----------RTRLAMIQDSGATLLDVINAVLDISRIEAG 287

CP000927_4442: domain 1 of 1, from 213 to 279: score 74.2, E = 1.4e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks++la +sHE+RTPL+a++g+a++L++ dt l++ q
CP000927_4 213 AKSDLLAVASHEIRTPLNAVMGFAHALRR--------DTFLTPTQ-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + +l+ + +l rL++ +Ldl++ eag
CP000927_4 250 ----------TELSQGVLDGGAQLTRLLDSVLDLAKVEAG 279

CP000927_3955: domain 1 of 1, from 314 to 382: score 73.6, E = 2e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHE++TPL++I g++elL + + +++++++r
CP000927_3 314 YLRDFAAAVSHEFKTPLAGITGAVELLDD-------HFDTMTPDER- 352

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l i ++ rl++L+ +l+dl+r++
CP000927_3 353 ----------RRFLGNISADSARLSHLVGRLMDLARADMA 382

CP000927_4816: domain 1 of 1, from 541 to 607: score 71.6, E = 7.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+s ELRTPLt+I+gy+elL++ + lse
CP000927_4 541 LKRDFVGNVSYELRTPLTTIIGYSELLER--------ADGLSERS-- 577

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + +++++a +l r i+d+Ld+++i+ag
CP000927_4 578 ----------RGHVASVRSAATQLARSIDDVLDMAQIDAG 607

CP000927_1229: domain 1 of 1, from 49 to 118: score 70.4, E = 1.6e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ fl+++sHELRTPL+a++g++e+L el+ ++l+++q
CP000927_1 49 QKRSFLRMVSHELRTPLNAVIGFSEILSCELY------GPLGAPQ-- 87

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ey +++++ llrL+n++ +++r+e
CP000927_1 88 ---------YKEYATLVHESGLKLLRLVNQIVEIARLEGH 118

CP000927_3515: domain 1 of 1, from 460 to 525: score 69.6, E = 2.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHELRTPL+++++ + L e e ++e r
CP000927_3 460 AKSVFLANMSHELRTPLNGVIAIGDRLAE----------ESDPERR- 495

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ + ++++ l++ + d+Ld s+ieag
CP000927_3 496 ----------RELAALVTSSGRLLEQVLGDILDVSKIEAG 525

CP000927_4741: domain 1 of 1, from 223 to 288: score 65.5, E = 4.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a++sHELRTP++aI++ a L ++ +++ ++ +
CP000927_4 223 AKSAFVAMISHELRTPISAILAGAARLHSDV-------PDAASKSH- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i +++ ++ L+ndlLdlsr++ag
CP000927_4 262 -------------AQLIADAGAMMRTLLNDLLDLSRLDAG 288

CP000927_2684: domain 1 of 1, from 665 to 733: score 64.6, E = 7.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +l ++sH+LRTPL++++g++ +L +++ +++ r
CP000927_2 665 FRSALLNSISHDLRTPLSTVLGASTTLIDYG-------KGMTAAVR- 703

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +i++eaerl+r + +lLd++r+e g
CP000927_2 704 ----------DDLLLSIREEAERLNRYVGNLLDMTRLEGG 733

CP000927_4223: domain 1 of 1, from 662 to 730: score 64.1, E = 1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +l ++sH+LRTPL++++g++++L e++ +++ + r
CP000927_4 662 FRSALLNSISHDLRTPLSTVLGASSTLTEYG-------DKMEPAVR- 700

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +i++eaerl+r + +lLd++r+e g
CP000927_4 701 ----------ADLMVSIREEAERLNRYVANLLDMTRLEGG 730

CP000927_4611: domain 1 of 1, from 307 to 372: score 61.1, E = 7.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++f+a+++HE+++PLt+Ir ++e+L ++
CP000927_4 307 AIERFAADVAHEIKNPLTSIRSAIETLDL---------VSDPAAR-- 342

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l ++++++ rl+rL+ d+ sr++a+
CP000927_4 343 ----------ARLLAILQQDVTRLDRLVTDISNASRLDAE 372

CP000927_4334: domain 1 of 1, from 246 to 304: score 53.9, E = 7.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +++ + l++
CP000927_4 246 QRTALLASVSHDLRTPLTRLKLEIALAEP------------------ 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
le + r++ ++++i++ L ++r e g
CP000927_4 275 ----------SPQLEAMARDLSEMEHMIDEYLAFARGEGG 304

CP000927_2594: domain 1 of 1, from 136 to 200: score 50.4, E = 7.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++l+HE+++PL++Irg+a+lL++ +s+ +
CP000927_2 136 SVVGLGRMLAHEIKNPLAGIRGAAQLLKT----------GASAAD-- 170

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + i +e++r++rL++++ +s g
CP000927_2 171 ----------QPLAQLIVDETDRIRRLVDRMEAFSDEVPG 200

CP000927_3538: domain 1 of 1, from 311 to 377: score 48.7, E = 2.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g++el+++ +e +
CP000927_3 311 AVGQLTGGVAHDFNNLLTVILGNIELIQR---------RSGDEHPL- 347

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++++aer +L ++lL +sr +
CP000927_3 348 ----------ARHVAAVRQAAERGGALTRQLLAFSRRQRL 377

CP000927_2413: domain 1 of 1, from 246 to 304: score 46.9, E = 7.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f+a+++HELRTPL+++r+ +e+L e ++ +
CP000927_2 246 LLKGFTADAAHELRTPLSVLRLRIEALPE------------NSGK-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +e+e + r++n++Ldl++++a
CP000927_2 279 --------------VRLAQEVEAMTRMVNQMLDLAQADAL 304

CP000927_2596: domain 1 of 1, from 506 to 577: score 46.9, E = 7.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ ++HE+++PLt I++ ae +++++ +d + + e+
CP000927_2 506 AWKDVARRIAHEIKNPLTPIQLSAERIRRKY----RKDITSDLET-- 546

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +eti+r++ + r+++++ ++r+ a+
CP000927_2 547 ---------FDRCTETIIRQVGDIGRMVDEFSAFARMPAP 577

CP000927_4289: domain 1 of 1, from 429 to 495: score 46.8, E = 7.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g++++L++ + ++ r
CP000927_4 429 AIGQLTGGVAHDFNNLLTVIIGALDVLQR---------NPDDAARR- 465

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l ++ +a+r +rL + lL ++r +
CP000927_4 466 ----------ERMLAAAQAAARRGERLTQHLLAFARRQPL 495

CP000927_2958: domain 1 of 1, from 406 to 477: score 42.8, E = 1.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++++l+HEL++P+ta+ y+e++++ l + ++++
CP000927_2 406 AMGTMASTLAHELNQPITAVANYVEAIRDLL-------AQPEPDDL- 444

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p++r++l + ++a r +++++l+d+ ++
CP000927_2 445 -------PMIRDALGEAASQAMRAGHIVRRLRDFVARGEV 477

CP000927_0626: domain 1 of 1, from 267 to 338: score 42.5, E = 1.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PL+aI ++ ++ ld ++e+q+
CP000927_0 267 AMGEMASTLAHELNQPLSAIANLLTGSRRLLD------RGRPEDQAK 307

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r++++++ +a r + i +++++ r +a
CP000927_0 308 ---------VRDAVDKASAQALRAGDVIHRMREFVRRGAT 338

CP000927_3657: domain 1 of 1, from 281 to 347: score 40.1, E = 6.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ Lta++g +el ++ l+e+ r
CP000927_3 281 AIGQLTGGLAHDFNNLLTAVLGSLELVRK----------RLPEDPR- 316

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ +++ a+r L +++L ++r ++
CP000927_3 317 ---------ISPLIDNAIHGAQRGAVLTQRMLAFARKQEL 347

CP000927_4633: domain 1 of 1, from 238 to 294: score 36.7, E = 5.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++a+++HEL TPL++I+ a + + ++++eq+
CP000927_4 238 ALGALAAAAAHELGTPLATISVVAREMVR----------NAPDEQT- 273

peLRledpeyreyletilreaerllrLindl<-*
re e ++ +a r+++++++l
CP000927_4 274 ----------REDAELMIGQAARCREILQRL 294

CP000927_2334: domain 1 of 1, from 282 to 353: score 36.6, E = 6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++++l+HE+++PLta+ y+e++++ +l gd+e + +
CP000927_2 282 AMGTMASTLAHEINQPLTAVANYLETIRD----LLIGDAEIDRSLL- 323

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++ + +e+ r ++++l+d+ +
CP000927_2 324 ----------REAVGEAASETLRAGFIVRRLRDFVARGDV 353

CP000927_3287: domain 1 of 1, from 548 to 616: score 33.9, E = 3.6e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ Lt+I+g ++++++ e
CP000927_3 548 AVGQLTGGLAHDFNNMLTGILGGIDMARR----------RIAEGR-- 582

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++l+ + ++++r +L +lL +sr ++
CP000927_3 583 ------VGDVDRFLDAAMQSGQRAAALTHRLLAFSRRQTL 616

CP000927_3561: domain 1 of 1, from 217 to 283: score 33.8, E = 3.9e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+ +a+lsHE+R+ Lt++ + ++ + + ++
CP000927_3 217 SKSDIVATLSHEIRNGLTGVTHVLAAAAG--------KGGRAAPS-- 253

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+ +l++a+ l + +n Ld + +e+g
CP000927_3 254 ----------REQLNAALDAAQDLVAVLNATLDSETAESG 283

CP000927_3276: domain 1 of 1, from 239 to 297: score 32.9, E = 7.1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++la+++H+LRT Lt + + ae + +
CP000927_3 239 ERTRMLAAIAHDLRTYLTRLTLRAEFIAD------------------ 267

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++ +++L++d L ++r +ag
CP000927_3 268 ----------DAQRAKAGSDLAEMSQLLDDTLLFARQDAG 297

CP000927_1377: domain 1 of 1, from 312 to 378: score 31.6, E = 1.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ LtaI++ ++ Ll +++ +++
CP000927_1 312 AIGQLAGGVAHDFNNLLTAIQLRLDELLH--------RHPVGDPS-- 348

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ i++ + r +L++ lL +sr ++
CP000927_1 349 ----------YEGLNEIRQTGVRAADLVRKLLAFSRKQTV 378

CP000927_1578: domain 1 of 1, from 291 to 348: score 26.9, E = 3.5e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++ +++H+LRTPLt +r+ +e+ +
CP000927_1 291 DRTAMIGAVAHDLRTPLTRLRFRIEAVPD------------------ 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ +++++++++i + + r +
CP000927_1 320 -----------DIRPKLASDIDQMEAMIAATMAFVRDTTR 348


Histogram of all scores:
score obs exp (one = represents 17 sequences)
----- --- ---
-14 11 0|=
-13 56 3|*===
-12 201 115|======*=====
-11 462 599|============================ *
-10 847 1112|================================================== *
-9 992 1149|==========================================================*
-8 877 860|==================================================*=
-7 667 542|===============================*========
-6 384 312|==================*====
-5 245 171|==========*====
-4 135 91|=====*==
-3 69 48|==*==
-2 19 25|=*
-1 21 13|*=
0 10 6|*
1 5 3|*
2 2 1|*
3 2 0|=
4 1 0|=
5 1 0|=
6 1 0|=
7 0 0|
8 0 0|
> 9 53 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 293.8566
P(chi-square) = 0

Total sequences searched: 5061

Whole sequence top hits:
tophits_s report:
Total hits: 49
Satisfying E cutoff: 49
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 49
Satisfying E cutoff: 49
Total memory: 40K


Acknowledgements:

This research is funded by:

Developed by: