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Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Alteromonas macleodii 'Deep ecotype'  

Data for CP001103  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001103.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001103_3807 CDS_4137301-4135430 92.9 5.4e-26 1
CP001103_0488 CDS_520884-517756 89.9 3.8e-25 1
CP001103_1169 CDS_1252473-1256528 88.9 7.3e-25 1
CP001103_1563 CDS_1696013-1693338 86.0 5.1e-24 1
CP001103_3140 CDS_3424294-3427173 84.7 1.2e-23 1
CP001103_3400 CDS_3693947-3696835 84.6 1.2e-23 1
CP001103_1739 CDS_1885532-1888867 82.8 3.9e-23 1
CP001103_2652 CDS_2906804-2909347 80.4 2e-22 1
CP001103_0893 CDS_952153-948941 80.2 2.1e-22 1
CP001103_2380 CDS_2603944-2600234 79.9 2.7e-22 1
CP001103_0570 CDS_604937-607696 78.9 5e-22 1
CP001103_0873 CDS_929220-925918 78.8 5.6e-22 1
CP001103_1267 CDS_1367934-1365826 76.9 1.8e-21 1
CP001103_3411 CDS_3711541-3710240 76.8 2.1e-21 1
CP001103_1617 CDS_1753974-1756328 75.5 4.9e-21 1
CP001103_0891 CDS_945651-948305 74.6 8.5e-21 1
CP001103_1221 CDS_1319588-1317489 70.9 9.3e-20 1
CP001103_3453 CDS_3755035-3752309 70.9 9.5e-20 1
CP001103_0534 CDS_569255-570616 68.8 3.8e-19 1
CP001103_1573 CDS_1706386-1705301 65.4 3.5e-18 1
CP001103_0312 CDS_343814-342408 61.9 3.3e-17 1
CP001103_3179 CDS_3463436-3465064 59.6 1.5e-16 1
CP001103_2868 CDS_3143756-3142614 57.4 6.2e-16 1
CP001103_1705 CDS_1846748-1848157 55.5 2.1e-15 1
CP001103_0715 CDS_757102-753659 54.0 5.9e-15 1
CP001103_2480 CDS_2722434-2720431 53.6 7.4e-15 1
CP001103_3918 CDS_4253950-4255284 51.7 2.6e-14 1
CP001103_3357 CDS_3643709-3644944 50.2 6.9e-14 1
CP001103_0931 CDS_988586-987210 48.6 2e-13 1
CP001103_3530 CDS_3835522-3837690 47.0 5.4e-13 1
CP001103_1269 CDS_1369900-1368389 39.5 7.6e-11 1
CP001103_3751 CDS_4070712-4069480 39.0 1e-10 1
CP001103_2232 CDS_2419428-2422448 37.0 3.9e-10 1
CP001103_0424 CDS_440399-444241 30.1 3.5e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001103_3807 1/1 240 305 .. 1 87 [] 92.9 5.4e-26
CP001103_0488 1/1 430 495 .. 1 87 [] 89.9 3.8e-25
CP001103_1169 1/1 827 892 .. 1 87 [] 88.9 7.3e-25
CP001103_1563 1/1 392 457 .. 1 87 [] 86.0 5.1e-24
CP001103_3140 1/1 576 641 .. 1 87 [] 84.7 1.2e-23
CP001103_3400 1/1 270 335 .. 1 87 [] 84.6 1.2e-23
CP001103_1739 1/1 534 599 .. 1 87 [] 82.8 3.9e-23
CP001103_2652 1/1 477 542 .. 1 87 [] 80.4 2e-22
CP001103_0893 1/1 433 498 .. 1 87 [] 80.2 2.1e-22
CP001103_2380 1/1 512 577 .. 1 87 [] 79.9 2.7e-22
CP001103_0570 1/1 553 618 .. 1 87 [] 78.9 5e-22
CP001103_0873 1/1 650 716 .. 1 87 [] 78.8 5.6e-22
CP001103_1267 1/1 145 210 .. 1 87 [] 76.9 1.8e-21
CP001103_3411 1/1 205 271 .. 1 87 [] 76.8 2.1e-21
CP001103_1617 1/1 285 350 .. 1 87 [] 75.5 4.9e-21
CP001103_0891 1/1 527 592 .. 1 87 [] 74.6 8.5e-21
CP001103_1221 1/1 207 270 .. 1 87 [] 70.9 9.3e-20
CP001103_3453 1/1 531 597 .. 1 87 [] 70.9 9.5e-20
CP001103_0534 1/1 239 301 .. 1 87 [] 68.8 3.8e-19
CP001103_1573 1/1 132 188 .. 1 79 [. 65.4 3.5e-18
CP001103_0312 1/1 249 315 .. 1 87 [] 61.9 3.3e-17
CP001103_3179 1/1 173 242 .. 1 87 [] 59.6 1.5e-16
CP001103_2868 1/1 153 219 .. 1 87 [] 57.4 6.2e-16
CP001103_1705 1/1 247 315 .. 1 87 [] 55.5 2.1e-15
CP001103_0715 1/1 784 849 .. 1 87 [] 54.0 5.9e-15
CP001103_2480 1/1 293 358 .. 1 87 [] 53.6 7.4e-15
CP001103_3918 1/1 229 289 .. 1 87 [] 51.7 2.6e-14
CP001103_3357 1/1 192 255 .. 1 87 [] 50.2 6.9e-14
CP001103_0931 1/1 234 296 .. 1 87 [] 48.6 2e-13
CP001103_3530 1/1 498 563 .. 1 87 [] 47.0 5.4e-13
CP001103_1269 1/1 254 322 .. 1 87 [] 39.5 7.6e-11
CP001103_3751 1/1 175 248 .. 1 87 [] 39.0 1e-10
CP001103_2232 1/1 756 821 .. 1 87 [] 37.0 3.9e-10
CP001103_0424 1/1 787 841 .. 1 78 [. 30.1 3.5e-08

Alignments of top-scoring domains:
CP001103_3807: domain 1 of 1, from 240 to 305: score 92.9, E = 5.4e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla +sHE+RTPL++I+g+a lLl+ t+l+e+q
CP001103_3 240 AKTDFLAVMSHEIRTPLNGIQGLATLLLD---------TPLTEKQ-- 275

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y + ++++a l ind+Ldls+ie+g
CP001103_3 276 ----------HQYASDLKSSASILATVINDVLDLSKIESG 305

CP001103_0488: domain 1 of 1, from 430 to 495: score 89.9, E = 3.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHE+RTPL+aI+g+++ L + + l+ +q
CP001103_0 430 VKSQFLANMSHEIRTPLNAILGFSKELNN---------ASLPTDQ-- 465

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++++ +a+ ll ++nd+Ld+s+ieag
CP001103_0 466 ----------QEQVRIVNTAADNLLTIVNDVLDFSKIEAG 495

CP001103_1169: domain 1 of 1, from 827 to 892: score 88.9, E = 7.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTP+++++g+++lL++ ++l+ eq
CP001103_1 827 LKSEFLANMSHEIRTPMNGVIGMLDLLKK---------SDLTVEQ-- 862

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++++ ++a +ll Lind+Ld+s+iea+
CP001103_1 863 ----------GQRVNIASSSASSLLVLINDILDFSKIEAN 892

CP001103_1563: domain 1 of 1, from 392 to 457: score 86.0, E = 5.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHE+RTP+++I+g++el++ +els+
CP001103_1 392 SKSIFLANMSHEIRTPMNGIIGLIELAQQ---------QELSPTV-- 427

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl+++ +++ l + ind+Ld+s+ieag
CP001103_1 428 ----------RGYLDKAAYSGQILISVINDILDFSKIEAG 457

CP001103_3140: domain 1 of 1, from 576 to 641: score 84.7, E = 1.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fla++sHE+RTP+++I+g ++lL +el+ eq
CP001103_3 576 LKSSFLASMSHEIRTPIHGISGVLQLLGG---------SELTGEQ-- 611

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ ++ +++ ll+++nd+Ld+s+ieag
CP001103_3 612 ----------KHYLSLAKFSIQGLLHIVNDILDFSKIEAG 641

CP001103_3400: domain 1 of 1, from 270 to 335: score 84.6, E = 1.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla++sHE+RTP++aI+g+++l+le +++ +qr
CP001103_3 270 AKTDFLATMSHEIRTPMNAIIGLTHLALE----------TQDNDQR- 305

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yle+++++++ ll+L n +Ld+s+ ea+
CP001103_3 306 ----------QQYLEKVQKSSNALLELMNSILDFSKVEAN 335

CP001103_1739: domain 1 of 1, from 534 to 599: score 82.8, E = 3.9e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ flan+sHE+RTP++aI+g+++l+l ++l +eq
CP001103_1 534 ARTAFLANMSHEIRTPMNAIIGFSDLMLG---------EALRDEQ-- 569

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l ti r+a++ll+L+nd+Ld ++++ g
CP001103_1 570 ----------KSHLTTINRSARSLLHLLNDILDSAKLDKG 599

CP001103_2652: domain 1 of 1, from 477 to 542: score 80.4, E = 2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksef++n+sHE+RTPL+aI+g+ ++ + + ++
CP001103_2 477 LKSEFISNISHEIRTPLNAIIGFGQTVDK---------RSSDLQT-- 512

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++++i ++e ll+LindlLd+s+ieag
CP001103_2 513 ----------KTLTRKIVTASEMLLQLINDLLDFSKIEAG 542

CP001103_0893: domain 1 of 1, from 433 to 498: score 80.2, E = 2.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHE+RTPL+aI+g+++l ++ ++ + eq
CP001103_0 433 AKSDFLARMSHEIRTPLNAIIGLTKLSQR---------AAEDKEQ-- 468

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l i+ +++ ll++ind+Ld+s+ieag
CP001103_0 469 ----------QTNLIQIEGASQTLLSIINDILDFSKIEAG 498

CP001103_2380: domain 1 of 1, from 512 to 577: score 79.9, E = 2.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks f++n+sHE+RTPL+++ g ++lL++ ++l+++
CP001103_2 512 VKSSFISNISHEMRTPLNGVVGSLSLLKR---------QPLNDKA-- 547

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ ++ + + l+ Lind+Ldls+ieag
CP001103_2 548 ----------EQLVSMMEISCNNLSVLINDVLDLSKIEAG 577

CP001103_0570: domain 1 of 1, from 553 to 618: score 78.9, E = 5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++flan+sHE+RTP+++I+g +el+l+ +el+e
CP001103_0 553 AKTQFLANMSHEIRTPMNGIIGSCELMLD---------SELPEHV-- 588

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++i r+a ll +++ +Ld+s+ie+g
CP001103_0 589 ----------AARAKVISRSAANLLMILDSILDYSKIESG 618

CP001103_0873: domain 1 of 1, from 650 to 716: score 78.8, E = 5.6e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ la+lsHELRTPL++++gy++lL +++ lse+q
CP001103_0 650 AKSRYLAGLSHELRTPLNVMLGYSQLLGKDV--------SLSEKQ-- 686

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +++r +e+l +Li+ lL++s+ieag
CP001103_0 687 ----------RDTMGIMRRNGEHLANLIEGLLEISKIEAG 716

CP001103_1267: domain 1 of 1, from 145 to 210: score 76.9, E = 1.8e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla+l HELRTPLt+I+gy+elL + +++++
CP001103_1 145 AKDKFLAHLGHELRTPLTSILGYTELLID---------DARNSAF-- 180

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++i++ +++ll+L+ndlLd+sri a+
CP001103_1 181 ----------QQELSIIHSNGKHLLSLLNDLLDMSRIMAE 210

CP001103_3411: domain 1 of 1, from 205 to 271: score 76.8, E = 2.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPLt+I gy+e+L +e s++ +
CP001103_3 205 MRKDFVANVSHELRTPLTVINGYLEILPV---------DEESDPFM- 241

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + + ++++r+++Li+dlL lsriea
CP001103_3 242 ----------HKAMKEMTSQTHRMQNLIEDLLVLSRIEAS 271

CP001103_1617: domain 1 of 1, from 285 to 350: score 75.5, E = 4.9e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a++sHELRTPL++I g++ +L++ tels+eq
CP001103_1 285 DKTRFIATISHELRTPLNGIVGLSRMLRD---------TELSDEQ-- 320

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ti+ +a l ++ nd+ dl +++
CP001103_1 321 ----------FSWVSTIYASAITLGNIFNDIIDLDKLDRD 350

CP001103_0891: domain 1 of 1, from 527 to 592: score 74.6, E = 8.5e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++efla+l+HELR+PL I+ a++L++ ++++r
CP001103_0 527 YRNEFLATLAHELRNPLGPIMSGASILET----------VDDDKTR- 562

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +i r+ae++++Lindl+d sri g
CP001103_0 563 ----------KRVTAIINRQAEYMSKLINDLMDVSRITRG 592

CP001103_1221: domain 1 of 1, from 207 to 270: score 70.9, E = 9.3e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+++sHELRTP++++ g++el+ + +e+
CP001103_1 207 AKSEFLSSMSHELRTPMNGLFGMIELAID-----------NPEKS-- 240

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl++++ ++++ll Lind+Ld s+ieag
CP001103_1 241 ----------SIYLKKAKTAGRQLLVLINDILDVSKIEAG 270

CP001103_3453: domain 1 of 1, from 531 to 597: score 70.9, E = 9.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla++sHELR PL++I g ++l+l+ + + + +
CP001103_3 531 AKDQFLASISHELRSPLNSIVGWTDLALM---------DVSNVDRM- 567

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +i+r+a +Lind+Ldlsri +g
CP001103_3 568 ----------TDALGVIKRAASTQAALINDILDLSRIISG 597

CP001103_0534: domain 1 of 1, from 239 to 301: score 68.8, E = 3.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ ++la++sHELR PL+ +++++ l+ ++ ++e+
CP001103_0 239 AQKRLLADVSHELRSPLARLQMALGLAHQ---------QNVDPET-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +++rea+r+++L+++lL+ls++eag
CP001103_0 275 -------------LARVEREADRMEALVSQLLTLSKAEAG 301

CP001103_1573: domain 1 of 1, from 132 to 188: score 65.4, E = 3.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++++l+HE+++PL +Irg+a+lL++ elsee+
CP001103_1 132 AARELVRGLAHEIKNPLGGIRGAAQLLEK----------ELSEEH-- 166

peLRledpeyreyletilreaerllrLindlL<-*
+e+++ i+++++rl++L+++lL
CP001103_1 167 ----------KEFTRMIIEQSDRLRNLVDRLL 188

CP001103_0312: domain 1 of 1, from 249 to 315: score 61.9, E = 3.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTP+t + + ++++l+ ++++e +
CP001103_0 249 QLSYFSADIAHELRTPVTNLTTQTQVILN---------QPRTESE-- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y ++l + l+e er+ ++++d+L l++ e+g
CP001103_0 285 ---------YVDILYSNLEEYERMTKMVSDMLLLAKTEHG 315

CP001103_3179: domain 1 of 1, from 173 to 242: score 59.6, E = 1.5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s+fl+++sHE+RTPL+aI +++ lL+ e+ + +l+e
CP001103_3 173 FRSDFLSYVSHEIRTPLNAINTFSRLLEGEA-----QKLKLPESF-- 212

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ + +++erll+++n +Ld+ +ieag
CP001103_3 213 ----------TTPLSHVTQSGERLLEIVNSVLDIKQIEAG 242

CP001103_2868: domain 1 of 1, from 153 to 219: score 57.4, E = 6.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+l+H++RTPL+a ++ya+ L + l+ e +
CP001103_2 153 SLGKMVASLAHQIRTPLSAAMLYASNLTR---------KGLGQEAQ- 189

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++ + ++ l++++nd+L +++ +++
CP001103_2 190 ----------TQFANKLTDRLKELESQVNDMLLFAKSGEE 219

CP001103_1705: domain 1 of 1, from 247 to 315: score 55.5, E = 2.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +l++++HEL+TPL++I+ ++lL e++ +el+ q
CP001103_1 247 IRTALLRHAAHELKTPLASIKEGCSLLSENV------VGELNKGQ-- 285

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+ + +++rl+ L++ lLd+ + ++
CP001103_1 286 ----------REVLSLLTASTQRLNTLVEKLLDYNLLLQQ 315

CP001103_0715: domain 1 of 1, from 784 to 849: score 54.0, E = 5.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla +sH+ +PL+a ++y+++L+e +el+e
CP001103_0 784 SKTRFLALASHDVLQPLNAAKLYVSALEE---------QELPESS-- 819

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++++ +++ + + Li lLd++r+++g
CP001103_0 820 ----------HAIIQKLGHSVTSSETLIGTLLDIARLDQG 849

CP001103_2480: domain 1 of 1, from 293 to 358: score 53.6, E = 7.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l+ +sHEL+TPL++I g++++++ ++++ +
CP001103_2 293 ERGMLLSRISHELKTPLNGITGMLQAIKF---------ENKDNVRI- 329

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++l++a+rll+Lind+Ld++ i +g
CP001103_2 330 -----------RKADIALHSADRLLSLINDVLDYTSIING 358

CP001103_3918: domain 1 of 1, from 229 to 289: score 51.7, E = 2.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++a++sH+LRTPLt Ir+++e+L e +q
CP001103_3 229 DRNIMTAGISHDLRTPLTRIRLASEMLPE--------------DQ-- 259

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i +++e ++++i+++ d++r +++
CP001103_3 260 ----------DWIKDGIVNDIEDMNAIIDQFIDYARYDTE 289

CP001103_3357: domain 1 of 1, from 192 to 255: score 50.2, E = 6.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f++n++HELRTPL++++ +++ + +el e+
CP001103_3 192 REQQFASNAAHELRTPLSVMKINIHNIANEL-----------GEK-- 225

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+t++ +++r+ + +n++L l+r +
CP001103_3 226 ----------GEALKTLKADTDRMIHAVNQFLLLTRTSPE 255

CP001103_0931: domain 1 of 1, from 234 to 296: score 48.6, E = 2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++++l ++sHELR PL+ +++ a l++ ++++ +
CP001103_0 234 AQQRLLHDVSHELRAPLARLQASAALIEQ----------NQPDNRH- 269

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i+++ +r+++Li+++L +s +e+
CP001103_0 270 -------------VKQIHNDCHRIDQLIQQILNFSTLENA 296

CP001103_3530: domain 1 of 1, from 498 to 563: score 47.0, E = 5.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +++ lsHELRTP+++++ +++L + +++q
CP001103_3 498 YLENMASRLSHELRTPIAVVKSSLDMLSH---------VNDTSQQ-- 533

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++e++++ ++rl+ ++n + + +r+e+
CP001103_3 534 ----------AVFVERAQSGVNRLSTILNSMSEATRLEQA 563

CP001103_1269: domain 1 of 1, from 254 to 322: score 39.5, E = 7.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L PL Ir++ L+ +++ + +e
CP001103_1 254 ELEDFAFVASHDLQEPLRKIRAFGNRLESGYN------DVIDERG-- 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl ++l++aer++ Li+dlL +sr +
CP001103_1 293 ----------KDYLARMLNAAERMSMLISDLLAFSRVSTR 322

CP001103_3751: domain 1 of 1, from 175 to 248: score 39.0, E = 1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a l H++RTPL++I+ ++ L + l +d+e + +
CP001103_3 175 LQEQYIAILGHDIRTPLSSIQIGISFLDD-----LIKDSEVASTVQV 216

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p +++++++++++r++rLi+d +d++ + g
CP001103_3 217 PV--------FKAVSRMKNSVQRMSRLIEDTMDFTHTRVG 248

CP001103_2232: domain 1 of 1, from 756 to 821: score 37.0, E = 3.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++ H+L +P +a ++a++L + ++++e
CP001103_2 756 SKTKFLAAAGHDLMQPFNAATLFASMLSK---------KTQGSEL-- 791

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e + ++++ ++L++ lLd+++++ag
CP001103_2 792 ----------ATLSEGVVNSLDNAQSLLSMLLDMTKLDAG 821

CP001103_0424: domain 1 of 1, from 787 to 841: score 30.1, E = 3.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f+ + HELRTP+ +I g +e + + t+++
CP001103_0 787 SKERFINEITHELRTPIQVINGSLEKISD---------TDMGT---- 820

peLRledpeyreyletilreaerllrLindl<-*
r+ l +++ +r ++Lin++
CP001103_0 821 ----------RKELVCVQDNMKRVEQLINQM 841


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-15 5 0|=
-14 42 0|===
-13 111 3|*=======
-12 259 93|======*============
-11 411 482|============================== *
-10 712 895|=================================================== *
-9 798 924|========================================================= *
-8 650 692|=============================================== *
-7 433 436|===============================*
-6 253 251|=================*=
-5 153 137|=========*=
-4 99 73|=====*==
-3 37 38|==*
-2 28 20|=*
-1 17 10|*=
0 8 5|*
1 3 2|*
2 2 1|*
3 3 0|=
4 0 0|
5 1 0|=
6 0 0|
7 0 0|
8 1 0|=
9 0 0|
10 1 0|=
11 0 0|
12 2 0|=
13 1 0|=
14 0 0|
15 1 0|=
16 2 0|=
17 1 0|=
18 0 0|
19 1 0|=
20 1 0|=
21 0 0|
> 22 36 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 382.1287
P(chi-square) = 0

Total sequences searched: 4072

Whole sequence top hits:
tophits_s report:
Total hits: 34
Satisfying E cutoff: 34
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 34
Satisfying E cutoff: 34
Total memory: 34K


Acknowledgements:

This research is funded by:

Developed by: