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Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Stenotrophomonas maltophilia R551-3  

Data for CP001111  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001111.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001111_1828 CDS_2056808-2059531 94.3 2.3e-26 1
CP001111_3035 CDS_3395059-3391532 94.0 2.7e-26 1
CP001111_0736 CDS_857412-854188 92.4 7.5e-26 1
CP001111_0156 CDS_194560-198159 91.0 1.8e-25 1
CP001111_3700 CDS_4176218-4178434 90.6 2.5e-25 1
CP001111_3036 CDS_3398702-3395157 89.6 4.8e-25 1
CP001111_0738 CDS_861532-858755 86.4 3.8e-24 1
CP001111_1736 CDS_1947872-1950985 84.5 1.3e-23 1
CP001111_0823 CDS_956994-955663 79.8 2.9e-22 1
CP001111_3174 CDS_3563928-3562561 74.7 8e-21 1
CP001111_0062 CDS_71106-73529 67.4 9.2e-19 1
CP001111_0471 CDS_550566-552035 66.8 1.3e-18 1
CP001111_0288 CDS_339587-336912 66.8 1.4e-18 1
CP001111_3159 CDS_3544450-3546228 66.2 2.1e-18 1
CP001111_3972 CDS_4479809-4476351 65.1 4.1e-18 1
CP001111_3833 CDS_4325619-4327010 62.1 3e-17 1
CP001111_1739 CDS_1952378-1953511 61.5 4.5e-17 1
CP001111_0447 CDS_527326-529314 59.3 1.8e-16 1
CP001111_2172 CDS_2435987-2437360 58.0 4.3e-16 1
CP001111_2165 CDS_2426446-2427813 57.3 6.5e-16 1
CP001111_2985 CDS_3332308-3331019 54.7 3.6e-15 1
CP001111_0653 CDS_773249-774520 54.7 3.6e-15 1
CP001111_3352 CDS_3778197-3776806 54.7 3.7e-15 1
CP001111_1205 CDS_1369044-1370504 54.6 3.9e-15 1
CP001111_3613 CDS_4077735-4076437 52.9 1.2e-14 1
CP001111_0122 CDS_162245-163306 52.1 2e-14 1
CP001111_3349 CDS_3771866-3774508 52.0 2.1e-14 1
CP001111_3137 CDS_3515476-3516765 47.5 3.9e-13 1
CP001111_2118 CDS_2375787-2376863 47.1 5.4e-13 1
CP001111_3429 CDS_3865314-3863497 46.3 9e-13 1
CP001111_1189 CDS_1349598-1348219 43.3 6.2e-12 1
CP001111_1790 CDS_2013283-2012207 41.4 2.2e-11 1
CP001111_2137 CDS_2398777-2399832 40.1 5.1e-11 1
CP001111_0619 CDS_733949-732657 38.4 1.6e-10 1
CP001111_2059 CDS_2309305-2312640 35.6 9.4e-10 1
CP001111_0472 CDS_553378-552032 34.6 1.8e-09 1
CP001111_1394 CDS_1582961-1584304 34.2 2.3e-09 1
CP001111_1735 CDS_1947719-1946556 32.9 5.6e-09 1
CP001111_1031 CDS_1178423-1180492 31.7 1.2e-08 1
CP001111_2462 CDS_2766805-2768154 31.4 1.5e-08 1
CP001111_3427 CDS_3863055-3861544 28.1 1.3e-07 1
CP001111_1300 CDS_1483658-1485067 27.9 1.4e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001111_1828 1/1 379 444 .. 1 87 [] 94.3 2.3e-26
CP001111_3035 1/1 809 874 .. 1 87 [] 94.0 2.7e-26
CP001111_0736 1/1 471 536 .. 1 87 [] 92.4 7.5e-26
CP001111_0156 1/1 693 758 .. 1 87 [] 91.0 1.8e-25
CP001111_3700 1/1 75 140 .. 1 87 [] 90.6 2.5e-25
CP001111_3036 1/1 813 878 .. 1 87 [] 89.6 4.8e-25
CP001111_0738 1/1 450 515 .. 1 87 [] 86.4 3.8e-24
CP001111_1736 1/1 364 432 .. 1 87 [] 84.5 1.3e-23
CP001111_0823 1/1 210 274 .. 1 87 [] 79.8 2.9e-22
CP001111_3174 1/1 243 309 .. 1 87 [] 74.7 8e-21
CP001111_0062 1/1 434 499 .. 1 87 [] 67.4 9.2e-19
CP001111_0471 1/1 264 332 .. 1 87 [] 66.8 1.3e-18
CP001111_0288 1/1 657 725 .. 1 87 [] 66.8 1.4e-18
CP001111_3159 1/1 370 436 .. 1 87 [] 66.2 2.1e-18
CP001111_3972 1/1 782 848 .. 1 87 [] 65.1 4.1e-18
CP001111_3833 1/1 241 305 .. 1 87 [] 62.1 3e-17
CP001111_1739 1/1 155 222 .. 1 87 [] 61.5 4.5e-17
CP001111_0447 1/1 276 342 .. 1 87 [] 59.3 1.8e-16
CP001111_2172 1/1 240 305 .. 1 87 [] 58.0 4.3e-16
CP001111_2165 1/1 236 302 .. 1 87 [] 57.3 6.5e-16
CP001111_2985 1/1 213 279 .. 1 87 [] 54.7 3.6e-15
CP001111_0653 1/1 213 279 .. 1 87 [] 54.7 3.6e-15
CP001111_3352 1/1 244 309 .. 1 87 [] 54.7 3.7e-15
CP001111_1205 1/1 258 323 .. 1 87 [] 54.6 3.9e-15
CP001111_3613 1/1 227 284 .. 1 87 [] 52.9 1.2e-14
CP001111_0122 1/1 122 181 .. 1 79 [. 52.1 2e-14
CP001111_3349 1/1 516 581 .. 1 87 [] 52.0 2.1e-14
CP001111_3137 1/1 208 273 .. 1 87 [] 47.5 3.9e-13
CP001111_2118 1/1 137 201 .. 1 87 [] 47.1 5.4e-13
CP001111_3429 1/1 366 434 .. 1 87 [] 46.3 9e-13
CP001111_1189 1/1 238 303 .. 1 87 [] 43.3 6.2e-12
CP001111_1790 1/1 138 202 .. 1 87 [] 41.4 2.2e-11
CP001111_2137 1/1 124 194 .. 1 87 [] 40.1 5.1e-11
CP001111_0619 1/1 219 285 .. 1 87 [] 38.4 1.6e-10
CP001111_2059 1/1 753 818 .. 1 87 [] 35.6 9.4e-10
CP001111_0472 1/1 227 281 .. 1 76 [. 34.6 1.8e-09
CP001111_1394 1/1 237 295 .. 1 87 [] 34.2 2.3e-09
CP001111_1735 1/1 153 220 .. 1 87 [] 32.9 5.6e-09
CP001111_1031 1/1 316 384 .. 1 87 [] 31.7 1.2e-08
CP001111_2462 1/1 238 295 .. 1 87 [] 31.4 1.5e-08
CP001111_3427 1/1 151 216 .. 1 87 [] 28.1 1.3e-07
CP001111_1300 1/1 254 312 .. 1 87 [] 27.9 1.4e-07

Alignments of top-scoring domains:
CP001111_1828: domain 1 of 1, from 379 to 444: score 94.3, E = 2.3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTPL+++ g++e+L + t l++eq
CP001111_1 379 AKSRFLANMSHEFRTPLNGLAGMTEVLAT---------TRLDDEQ-- 414

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+ti+ ++++ll+L++++Ld+s ieag
CP001111_1 415 ----------RECLNTIQASTRSLLALVEEVLDISAIEAG 444

CP001111_3035: domain 1 of 1, from 809 to 874: score 94.0, E = 2.7e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++flanl HE+RTP+t+++g++elLl+ ++l+++q
CP001111_3 809 AKTRFLANLGHEIRTPMTGVLGMSELLLA---------SPLDPQQ-- 844

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+++i++++e+ll+L+nd Ldl+rie+g
CP001111_3 845 ----------RGYTQSIRHAGEHLLHLVNDALDLARIESG 874

CP001111_0736: domain 1 of 1, from 471 to 536: score 92.4, E = 7.5e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL +++g++elL t+l++ q
CP001111_0 471 AKSQFLATMSHEIRTPLYGVLGTLELLGL---------TPLDARQ-- 506

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl ti+r++ l +Li+d+Ld s++eag
CP001111_0 507 ----------QHYLATIQRSSSTLMQLISDILDVSKAEAG 536

CP001111_0156: domain 1 of 1, from 693 to 758: score 91.0, E = 1.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTP+++++g++e+L ++l++eq
CP001111_0 693 AKSRFLATMSHEIRTPMSGVLGMLEVLAH---------SPLDAEQ-- 728

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +i+++a+ l+++++d+Ld+sr+eag
CP001111_0 729 ----------QRILGVIEDSAQMLRQILDDILDYSRLEAG 758

CP001111_3700: domain 1 of 1, from 75 to 140: score 90.6, E = 2.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHE+RTPL++I+ ++el+ + ++l+e+q
CP001111_3 75 AKGEFLATMSHEIRTPLNGILPMLELIAR---------GPLGEDQ-- 110

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l t+ ++++llr+++d+Ld+sr+ea+
CP001111_3 111 ----------RQMLATASASSQQLLRIVDDILDYSRLEAQ 140

CP001111_3036: domain 1 of 1, from 813 to 878: score 89.6, E = 4.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla+l HE RTP+t+++g++elLl+ t+l++ q
CP001111_3 813 AKSRFLATLGHEVRTPMTGVLGMSELLLA---------TPLDPVQ-- 848

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y +i++++ +llrL+nd Ldl+rieag
CP001111_3 849 ----------RSYAGSIQQAGSHLLRLVNDALDLARIEAG 878

CP001111_0738: domain 1 of 1, from 450 to 515: score 86.4, E = 3.8e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTPL +++g++elL t+l++ q
CP001111_0 450 AKSAFLATMSHEIRTPLYGVLGTLELLGH---------TTLDPRQ-- 485

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ti++++ ll+Li+d+Ld s+ie+g
CP001111_0 486 ----------SQYLRTIESSSSVLLQLISDVLDVSKIESG 515

CP001111_1736: domain 1 of 1, from 364 to 432: score 84.5, E = 1.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++ + +a+lL + +d++l+eeq
CP001111_1 364 YKSEFLANMSHELRTPLNSSLILAKLLAD------NKDGTLTEEQ-- 402

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y + il++ + ll+Lind+Ldlsrieag
CP001111_1 403 ----------VKYARAILSSNNDLLALINDILDLSRIEAG 432

CP001111_0823: domain 1 of 1, from 210 to 274: score 79.8, E = 2.9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHELRTPLt++ gy++++ ++ +
CP001111_0 210 VRRDFVANVSHELRTPLTVVHGYLDMMDP---------EDFPGTG-- 245

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+le ++++++r+ +L++dlL+lsr+e++
CP001111_0 246 -----------PMLEEMRKQSQRMAQLVEDLLTLSRLESQ 274

CP001111_3174: domain 1 of 1, from 243 to 309: score 74.7, E = 8e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +ef a++sHELRTPL++Irg++elLl+ ++ l+e+
CP001111_3 243 RDREFNADVSHELRTPLAVIRGATELLLT--------RPGLDEKV-- 279

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+r+ +++++Li lL lsr e g
CP001111_3 280 ----------LQRLQRIQRAEQQCSDLIGALLLLSRNERG 309

CP001111_0062: domain 1 of 1, from 434 to 499: score 67.4, E = 9.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTP+++++g++e L + ++l+ q
CP001111_0 434 AKTHFLATMSHEIRTPMSTLLGMLERLAA---------SDLDHRQ-- 469

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l ti ++a+ l+++++d+L r++
CP001111_0 470 ----------QQVLATIGDAAQMLRQILDDVLHSQRLQPA 499

CP001111_0471: domain 1 of 1, from 264 to 332: score 66.8, E = 1.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++an+sH+LRTPL+++ gy+e+L +d +ls+++r
CP001111_0 264 QRRELVANISHDLRTPLSSLHGYLETLAL-------KDVTLSPDER- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl ++l ++ rL + l +l+r+e+g
CP001111_0 303 ----------RRYLGIALAQSAKVGRLARALFELARLEHG 332

CP001111_0288: domain 1 of 1, from 657 to 725: score 66.8, E = 1.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +l+++sH+LR PL+a++g a+ L ++ ++++ +r
CP001111_0 657 LRSALLSSVSHDLRSPLAAMIGSADSLASYG-------AAMDTTDR- 695

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+til e+erl+r i++lLd++r++++
CP001111_0 696 ----------RALLDTILVEGERLDRYIQNLLDMTRLGHE 725

CP001111_3159: domain 1 of 1, from 370 to 436: score 66.2, E = 2.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f a+l+HE+R+PL+aI +++lL+e+ t +e +
CP001111_3 370 AMGRFSASLAHEIRNPLAAINYAVQLLEEG--------TGFNESD-- 406

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l++i+++ +r + +++ +L l+r e
CP001111_3 407 ----------RRLLQIIRQQCQRTNGIVESVLGLARRERA 436

CP001111_3972: domain 1 of 1, from 782 to 848: score 65.1, E = 4.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+ +PL+a r++a++L++ +++ s+eq
CP001111_3 782 SKTRFLAAISHDVLQPLNAARLFASALRD--------SDHVSDEQ-- 818

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e+++ +++ ++L++ lLd sr++ag
CP001111_3 819 ----------KHLAERVDASLRAAEELLDGLLDVSRLDAG 848

CP001111_3833: domain 1 of 1, from 241 to 305: score 62.1, E = 3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+a++sHELRTPL+++r+ +e++++ + ++ +
CP001111_3 241 NRRAFIADISHELRTPLAVVRAELEAIED---------GIRPLDR-- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +++e+++l +L++dl dls ++g
CP001111_3 277 -----------ANLGGLQSEIRQLGKLVDDLHDLSMTQSG 305

CP001111_1739: domain 1 of 1, from 155 to 222: score 61.5, E = 4.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++a l H+LRTPL+aI++ ++ L +l + ++
CP001111_1 155 LNETMAAVLTHDLRTPLSAILLCVDKLALDL-------PQGNAGA-- 192

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ ++ ++ r+ r++++lLd+sri++g
CP001111_1 193 ----------QQTLQYLEASTLRMARMVEQLLDFSRIRSG 222

CP001111_0447: domain 1 of 1, from 276 to 342: score 59.3, E = 1.8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+lsHELRTPLt+I+g +elLl + +
CP001111_0 276 LKDEFLATLSHELRTPLTTILGWSELLLQ---------RVDNTSPL- 312

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l +i ++a rLi+d+Ldls + g
CP001111_0 313 ----------YKGLGVIANSAGAQKRLISDMLDLSSMLLG 342

CP001111_2172: domain 1 of 1, from 240 to 305: score 58.0, E = 4.3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f++n++H+LRTPL+a++ +e l+ ++ + q
CP001111_2 240 AQRRFVSNAAHQLRTPLAAMQVELESSLR---------QHDPQAQ-- 275

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ l + rl++L+n+lL lsr e +
CP001111_2 276 ----------QLALSGTLAGLARLQHLVNQLLMLSRSEDP 305

CP001111_2165: domain 1 of 1, from 236 to 302: score 57.3, E = 6.5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef +l+HELRTP+t +++ +++ l+ +++s e
CP001111_2 236 RLTEFSGDLAHELRTPITNMLTQVQVVLA---------HPRSNEA-- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre l + +e+++l + + dlL l+++ea+
CP001111_2 272 ---------YRETLASCAEELQQLAQTVGDLLYLAQAEAP 302

CP001111_2985: domain 1 of 1, from 213 to 279: score 54.7, E = 3.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTP++++ g+ael+le ++ +e +
CP001111_2 213 RERVFISTASHELRTPIAVMTGAAELALE---------QPGLPERA- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++++lr a+ ++Li+ lL l+r
CP001111_2 250 ----------RQQIQRVLRTAQGVEQLIELLLVLARDPDR 279

CP001111_0653: domain 1 of 1, from 213 to 279: score 54.7, E = 3.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPLt+Ir +++++l d+ l +
CP001111_0 213 RERNFTRDASHELRTPLTVIRVASDMALG--------DDSLQPRL-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l++i+r+++ +++ i+ +L l+r
CP001111_0 250 ----------RRSLQRIQRAGRDMEAVIDAFLILAREADV 279

CP001111_3352: domain 1 of 1, from 244 to 309: score 54.7, E = 3.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+a ++H++RTPL+a+r+ a+l+l+ + ++e++
CP001111_3 244 TLRAFMAEAAHQMRTPLAALRAQAQLALD----------DDDPEDM- 279

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+ i+r a +++rL+n+lL + +
CP001111_3 280 ----------RRSLQAIERNATHMSRLLNQLLSDASVIHR 309

CP001111_1205: domain 1 of 1, from 258 to 323: score 54.6, E = 3.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +l HE++ PL+aIrg+aelL+e +l+e +r
CP001111_1 258 YVEQYVQSLTHEMKSPLAAIRGAAELLQE----------PLPEADR- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++i ++ erl + i+ lL l+ e+
CP001111_1 294 ----------VHFARSIVDQQERLTETIDKLLALAEVEQH 323

CP001111_3613: domain 1 of 1, from 227 to 284: score 52.9, E = 1.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++la+++H+LRTPLt++r+ ae ++++q
CP001111_3 227 DMTRMLAAVAHDLRTPLTGLRLRAEF--------------APPPQ-- 257

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++er++ +i+++Ld++r e +
CP001111_3 258 -------------AARMVADIERMDTMIEQVLDYARGELQ 284

CP001111_0122: domain 1 of 1, from 122 to 181: score 52.1, E = 2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s l +l+HELR+PL++++g+a+lL +++ + +++ +
CP001111_0 122 ALSAALKGLAHELRNPLAGLKGAAQLLARRA-------AQRDASE-- 159

peLRledpeyreyletilreaerllrLindlL<-*
re++e i +e+erl+ L+++lL
CP001111_0 160 ----------RELIELIGSEIERLNGLLDQLL 181

CP001111_3349: domain 1 of 1, from 516 to 581: score 52.0, E = 2.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a++ H+L +PL+a r+++++L+ +ls++ +
CP001111_3 516 YKTRFVASAVHDLLQPLNAARMFVSVLRG----------KLSDPAQ- 551

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + i+ ++ ++++n lLd++r+e+g
CP001111_3 552 ----------QQTSDHIDAALAAQDAILNSLLDIARLESG 581

CP001111_3137: domain 1 of 1, from 208 to 273: score 47.5, E = 3.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++ ++sHELRTP++ + + ++l+++ ++ ++
CP001111_3 208 RQRDLTHAISHELRTPIARVAFGLDLMRD---------SDDPARR-- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++ ++ l+ L+++lL ++r+e++
CP001111_3 244 ----------VRLAQGLHGDLAELNGLVSELLAYERLEHP 273

CP001111_2118: domain 1 of 1, from 137 to 201: score 47.1, E = 5.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + a+++HELRTP+t +rg ++ + e+++ e ++eq
CP001111_2 137 NRVFWNAAIAHELRTPMTILRGRLQGIAEGVF-------EPGPEQ-- 174

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++l ++e l r+i+dl+ s +e+g
CP001111_2 175 -------------FNSMLTQLEGLTRIIEDLRVVSLAESG 201

CP001111_3429: domain 1 of 1, from 366 to 434: score 46.3, E = 9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL + g+++ L + + +e+ +++
CP001111_3 366 ELEAFSYSVSHDLRAPLRHVAGFSDKLSR-------HLGEQADDKS- 404

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yle+i ++a+r+ +Li+dlL +sr++
CP001111_3 405 ----------RHYLEVISSSARRMAALIDDLLVYSRLGRV 434

CP001111_1189: domain 1 of 1, from 238 to 303: score 43.3, E = 6.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a+++H+LR PL+++ ++++ +l+ + +++++
CP001111_1 238 LQNRFIADAAHQLRSPLAGMALHVDQALA----------HGDPDTV- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l+ i+r +r r +lL lsr+++
CP001111_1 274 ----------REALQHIRRLNQRTARVSTQLLALSRAQTV 303

CP001111_1790: domain 1 of 1, from 138 to 202: score 41.4, E = 2.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + a+++HELRTP+t +rg ++ L e + +++
CP001111_1 138 ERAMWHAAIAHELRTPVTILRGRLQGLAE---------GVFQPDE-- 173

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++l ++e l+rLi+dl+ ls ++
CP001111_1 174 -----------SQFRSLLAQVEGLSRLIEDLRVLSLSDNA 202

CP001111_2137: domain 1 of 1, from 124 to 194: score 40.1, E = 5.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+e++ +++HE ++PL+aI ae+++++l ++ + +++
CP001111_2 124 TVGELTTSIAHEVNQPLAAIASSAEACQRWLA------QDPPNVDKA 164

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ + +il +a+r + i +++ l++ a+
CP001111_2 165 ----------RQTVARILADAHRAGDVIARIRGLTQGAAP 194

CP001111_0619: domain 1 of 1, from 219 to 285: score 38.4, E = 1.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f++++sHELRTPL++I+ +a Ll ++ ls+
CP001111_0 219 REHAFTRDASHELRTPLSVISSAAGQLLG--------EAGLSARG-- 255

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ i+ +a +l++ lL l+r e
CP001111_0 256 ----------QQHLQHIRLSALQLQQAMTALLALAREEPA 285

CP001111_2059: domain 1 of 1, from 753 to 818: score 35.6, E = 9.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fl ++ H+L +PL+a +++++++ + +e +
CP001111_2 753 AKTRFLTAVGHDLIQPLHAAQLLTDAMSQ----------HIESEFL- 788

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+ i+ ++++ ++L++ lLd+sr+eag
CP001111_2 789 ----------DSFLRQIRGALDSTDDLLSGLLDISRLEAG 818

CP001111_0472: domain 1 of 1, from 227 to 281: score 34.6, E = 1.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++HE RTPL+ +r+ + L++ t+l+e q
CP001111_0 227 SQRVLAQAVAHEVRTPLARMRFGLADLED---------TALDEIQ-- 262

peLRledpeyreyletilreaerllrLin<-*
r++l ++ +++rl++L +
CP001111_0 263 ----------RDALGGLRTDVDRLQHLTD 281

CP001111_1394: domain 1 of 1, from 237 to 295: score 34.2, E = 2.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++fla+++HELR P++++++ ++ L
CP001111_1 237 ARDKFLADAAHELRVPIAVVQARLSQLPQ------------------ 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + +l ++ rl + + lLdl r++ +
CP001111_1 266 ----------GELKSQLLTDVARLGNVAEHLLDLQRLDRN 295

CP001111_1735: domain 1 of 1, from 153 to 220: score 32.9, E = 5.6e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++lsHE+++ Lt+I +++lL ++ ++
CP001111_1 153 TVGRLSRGLSHEFNNLLTTIGNALDLLSLRV-------NGDDARA-- 190

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+ ++ +++r L ++lL +s ++
CP001111_1 191 ----------AELLDAAQTATDRGALLTRQLLAFSTGQTL 220

CP001111_1031: domain 1 of 1, from 316 to 384: score 31.7, E = 1.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+ ++++ + rl
CP001111_1 316 AIGQLTGGIAHDFNNMLTGILSALDIVRL----------------RL 346

peLR...ledpeyreyletilreaerllrLindlLdlsrieag<-*
++R ++l +++l+t+ +a+r +L ++lL +sr ++
CP001111_1 347 EMGRvddL-----ERFLDTATTSAQRAAALTQRLLAFSRRQSL 384

CP001111_2462: domain 1 of 1, from 238 to 295: score 31.4, E = 1.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a+++HELRTP++ +r ++++ +
CP001111_2 238 RQRRFIAAAAHELRTPIAILRVKVDAADD------------------ 266

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e+ rl L ++lLdl r+++
CP001111_2 267 -----------ATSRSLAVEVARLATLAEQLLDLHRMDED 295

CP001111_3427: domain 1 of 1, from 151 to 216: score 28.1, E = 1.3e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s ++a+lsH+LR+ L ++ + +lL++ +++q+
CP001111_3 151 SLSLLAAGLSHDLRNILQPLLIMPDLLKA----------RTDDPQL- 186

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++i ++++r ++ + +L + r
CP001111_3 187 ----------HHLADVIAECGRRGHEMAESMLSFVRGSRK 216

CP001111_1300: domain 1 of 1, from 254 to 312: score 27.9, E = 1.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++la++ H+L TPLt +r+ +e +
CP001111_1 254 ERTQMLAAITHDLQTPLTRLRLRLENVSD------------------ 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e+++ ++ +++L+++ L+l+r +
CP001111_1 283 ----------ETLRERLIGDLAAMQALVREGLELARSAES 312


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-14 6 0|=
-13 44 3|*===
-12 112 92|======*=
-11 356 478|========================== *
-10 640 888|============================================== *
-9 815 917|==========================================================*
-8 665 686|================================================*
-7 528 432|==============================*=======
-6 356 249|=================*========
-5 199 136|=========*=====
-4 120 73|=====*===
-3 67 38|==*==
-2 39 20|=*=
-1 21 10|*=
0 11 5|*
1 6 2|*
2 2 1|*
3 2 0|=
4 0 0|
5 0 0|
> 6 50 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 296.3030
P(chi-square) = 0

Total sequences searched: 4039

Whole sequence top hits:
tophits_s report:
Total hits: 42
Satisfying E cutoff: 42
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 42
Satisfying E cutoff: 42
Total memory: 37K


Acknowledgements:

This research is funded by:

Developed by: