Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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39 projects found  

7 accessions found for Cyanothece sp. PCC 7424  

Data for CP001291  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001291.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001291_1932 CDS_2223937-2228088 119.1 2.7e-33 2
CP001291_1813 CDS_2064140-2067997 101.6 2.4e-28 1
CP001291_4964 CDS_5652747-5649571 100.7 4.5e-28 1
CP001291_3921 CDS_4457131-4454090 96.7 5.9e-27 1
CP001291_1097 CDS_1225999-1227732 95.6 1.2e-26 1
CP001291_1061 CDS_1189790-1186584 95.0 1.8e-26 1
CP001291_3675 CDS_4191485-4185591 92.9 7.2e-26 1
CP001291_1391 CDS_1564801-1566015 92.4 9.8e-26 1
CP001291_2774 CDS_3161480-3158670 92.3 1.1e-25 1
CP001291_1938 CDS_2235794-2233818 92.0 1.3e-25 1
CP001291_4438 CDS_5026644-5029826 87.1 3.1e-24 1
CP001291_1977 CDS_2277005-2281555 84.2 2.1e-23 1
CP001291_0114 CDS_136245-130462 79.3 5.2e-22 1
CP001291_1931 CDS_2221927-2223828 77.2 2e-21 1
CP001291_3673 CDS_4184651-4183251 75.8 4.9e-21 1
CP001291_1270 CDS_1437155-1435818 73.7 1.9e-20 1
CP001291_0589 CDS_666274-668805 72.4 4.5e-20 1
CP001291_5109 CDS_5812121-5814394 72.4 4.6e-20 1
CP001291_3999 CDS_4545675-4544242 72.1 5.7e-20 1
CP001291_1091 CDS_1218795-1219916 70.3 1.8e-19 1
CP001291_4869 CDS_5550326-5547459 70.1 2.1e-19 1
CP001291_2771 CDS_3157355-3152919 69.5 3e-19 1
CP001291_3492 CDS_3981347-3983464 69.2 3.7e-19 1
CP001291_0037 CDS_45714-46877 67.2 1.4e-18 1
CP001291_3515 CDS_4023209-4024576 67.1 1.5e-18 1
CP001291_0674 CDS_761955-763214 65.6 3.8e-18 1
CP001291_0933 CDS_1054433-1055791 65.4 4.3e-18 1
CP001291_4180 CDS_4757537-4758925 62.9 2.3e-17 1
CP001291_1426 CDS_1605536-1603779 62.5 2.8e-17 1
CP001291_2777 CDS_3164470-3165564 61.8 4.7e-17 1
CP001291_4453 CDS_5046743-5047873 61.2 7e-17 1
CP001291_4896 CDS_5577192-5575909 60.6 9.9e-17 1
CP001291_0974 CDS_1100804-1100004 60.1 1.4e-16 1
CP001291_4517 CDS_5134419-5135750 59.3 2.4e-16 1
CP001291_1118 CDS_1250615-1249251 57.7 6.9e-16 1
CP001291_4332 CDS_4927838-4924035 57.5 7.8e-16 1
CP001291_5063 CDS_5762161-5763609 55.9 2.1e-15 1
CP001291_4989 CDS_5677237-5673479 54.4 5.6e-15 1
CP001291_4106 CDS_4664915-4666753 53.2 1.3e-14 1
CP001291_3672 CDS_4183189-4181501 52.0 2.8e-14 1
CP001291_4892 CDS_5571912-5573687 50.7 6.3e-14 1
CP001291_4956 CDS_5642470-5640383 50.7 6.5e-14 1
CP001291_4838 CDS_5509344-5507791 50.3 8.2e-14 1
CP001291_0491 CDS_554912-553791 49.5 1.4e-13 1
CP001291_3826 CDS_4359466-4360776 48.2 3.2e-13 1
CP001291_2299 CDS_2622458-2620176 48.1 3.6e-13 1
CP001291_0659 CDS_740746-743811 46.8 8.3e-13 1
CP001291_2203 CDS_2507812-2509236 46.8 8.4e-13 1
CP001291_0427 CDS_474551-476662 46.6 9.5e-13 1
CP001291_5010 CDS_5699454-5700749 46.1 1.3e-12 1
CP001291_2629 CDS_2977908-2976580 43.3 8.3e-12 1
CP001291_1389 CDS_1561271-1563766 42.4 1.4e-11 1
CP001291_0035 CDS_42943-45252 40.3 5.7e-11 1
CP001291_2631 CDS_2978927-2981548 38.8 1.5e-10 1
CP001291_4941 CDS_5622312-5621131 38.8 1.6e-10 1
CP001291_2214 CDS_2529833-2528715 33.0 6.5e-09 1
CP001291_4973 CDS_5659989-5661479 30.4 3.7e-08 1
CP001291_1392 CDS_1566022-1567107 28.4 1.4e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001291_1813 1/1 820 886 .. 1 87 [] 101.6 2.4e-28
CP001291_4964 1/1 601 667 .. 1 87 [] 100.7 4.5e-28
CP001291_3921 1/1 530 595 .. 1 87 [] 96.7 5.9e-27
CP001291_1097 1/1 320 387 .. 1 87 [] 95.6 1.2e-26
CP001291_1061 1/1 604 670 .. 1 87 [] 95.0 1.8e-26
CP001291_3675 1/1 1252 1320 .. 1 87 [] 92.9 7.2e-26
CP001291_1391 1/1 176 244 .. 1 87 [] 92.4 9.8e-26
CP001291_2774 1/1 272 337 .. 1 87 [] 92.3 1.1e-25
CP001291_1938 1/1 419 487 .. 1 87 [] 92.0 1.3e-25
CP001291_4438 1/1 814 882 .. 1 87 [] 87.1 3.1e-24
CP001291_1977 1/1 1283 1351 .. 1 87 [] 84.2 2.1e-23
CP001291_0114 1/1 1437 1502 .. 1 87 [] 79.3 5.2e-22
CP001291_1931 1/1 388 456 .. 1 87 [] 77.2 2e-21
CP001291_3673 1/1 247 314 .. 1 87 [] 75.8 4.9e-21
CP001291_1270 1/1 197 264 .. 1 87 [] 73.7 1.9e-20
CP001291_0589 1/1 339 407 .. 1 87 [] 72.4 4.5e-20
CP001291_5109 1/1 380 451 .. 1 87 [] 72.4 4.6e-20
CP001291_3999 1/1 255 322 .. 1 87 [] 72.1 5.7e-20
CP001291_1091 1/1 142 210 .. 1 87 [] 70.3 1.8e-19
CP001291_4869 1/1 580 646 .. 1 87 [] 70.1 2.1e-19
CP001291_2771 1/1 1105 1171 .. 1 87 [] 69.5 3e-19
CP001291_3492 1/1 445 512 .. 1 87 [] 69.2 3.7e-19
CP001291_0037 1/1 162 230 .. 1 87 [] 67.2 1.4e-18
CP001291_3515 1/1 199 263 .. 1 87 [] 67.1 1.5e-18
CP001291_0674 1/1 196 262 .. 1 87 [] 65.6 3.8e-18
CP001291_0933 1/1 220 285 .. 1 87 [] 65.4 4.3e-18
CP001291_4180 1/1 241 307 .. 1 87 [] 62.9 2.3e-17
CP001291_1426 1/1 214 281 .. 1 87 [] 62.5 2.8e-17
CP001291_1932 1/2 351 419 .. 1 87 [] 62.5 3e-17
CP001291_2777 1/1 144 208 .. 1 87 [] 61.8 4.7e-17
CP001291_4453 1/1 149 217 .. 1 87 [] 61.2 7e-17
CP001291_4896 1/1 199 266 .. 1 87 [] 60.6 9.9e-17
CP001291_0974 1/1 27 94 .. 1 87 [] 60.1 1.4e-16
CP001291_4517 1/1 212 279 .. 1 87 [] 59.3 2.4e-16
CP001291_1118 1/1 221 282 .. 1 81 [. 57.7 6.9e-16
CP001291_4332 1/1 1051 1119 .. 1 87 [] 57.5 7.8e-16
CP001291_1932 2/2 1165 1233 .. 1 87 [] 56.6 1.3e-15
CP001291_5063 1/1 256 321 .. 1 87 [] 55.9 2.1e-15
CP001291_4989 1/1 1030 1098 .. 1 87 [] 54.4 5.6e-15
CP001291_4106 1/1 382 455 .. 1 87 [] 53.2 1.3e-14
CP001291_3672 1/1 344 412 .. 1 87 [] 52.0 2.8e-14
CP001291_4892 1/1 372 440 .. 1 87 [] 50.7 6.3e-14
CP001291_4956 1/1 478 546 .. 1 87 [] 50.7 6.5e-14
CP001291_4838 1/1 244 306 .. 1 81 [. 50.3 8.2e-14
CP001291_0491 1/1 144 212 .. 1 87 [] 49.5 1.4e-13
CP001291_3826 1/1 203 278 .. 1 87 [] 48.2 3.2e-13
CP001291_2299 1/1 524 592 .. 1 87 [] 48.1 3.6e-13
CP001291_0659 1/1 652 719 .. 1 87 [] 46.8 8.3e-13
CP001291_2203 1/1 230 298 .. 1 87 [] 46.8 8.4e-13
CP001291_0427 1/1 335 398 .. 1 83 [. 46.6 9.5e-13
CP001291_5010 1/1 213 284 .. 1 87 [] 46.1 1.3e-12
CP001291_2629 1/1 181 247 .. 1 87 [] 43.3 8.3e-12
CP001291_1389 1/1 609 677 .. 1 87 [] 42.4 1.4e-11
CP001291_0035 1/1 529 597 .. 1 87 [] 40.3 5.7e-11
CP001291_2631 1/1 501 568 .. 1 87 [] 38.8 1.5e-10
CP001291_4941 1/1 164 236 .. 1 87 [] 38.8 1.6e-10
CP001291_2214 1/1 141 209 .. 1 87 [] 33.0 6.5e-09
CP001291_4973 1/1 274 317 .. 4 67 .. 30.4 3.7e-08
CP001291_1392 1/1 134 202 .. 1 87 [] 28.4 1.4e-07

Alignments of top-scoring domains:
CP001291_1813: domain 1 of 1, from 820 to 886: score 101.6, E = 2.4e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL+aI+g+++lL + d+ ls++q
CP001291_1 820 AKSEFLANMSHELRTPLNAILGFTQLLAR--------DSSLSDKQ-- 856

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+ +i r++e+ll+L+nd+L++s+ieag
CP001291_1 857 ----------HEYVGIIGRSGEHLLSLLNDVLEMSKIEAG 886

CP001291_4964: domain 1 of 1, from 601 to 667: score 100.7, E = 4.5e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f+an+sHELRTPL+aI+g+++l+ + +t+l++e+
CP001291_4 601 AKSRFIANMSHELRTPLNAILGFSQLMNR--------STTLPPEH-- 637

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +++i r++e+ll Lin++L+l++ieag
CP001291_4 638 ----------QENIQIINRSGEYLLTLINNILTLAKIEAG 667

CP001291_3921: domain 1 of 1, from 530 to 595: score 96.7, E = 5.9e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP++aI+g+++lL++ +e+q+
CP001291_3 530 AKSEFLANMSHEIRTPMNAILGFCDLLKD----------RITEPQT- 565

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y++ i +++ ll+Lind+Ldls+ieag
CP001291_3 566 ----------RGYVDLISASGKTLLELINDILDLSKIEAG 595

CP001291_1097: domain 1 of 1, from 320 to 387: score 95.6, E = 1.2e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksefla+ HELRTPL++I+g+++l+l+++ ++ seeq
CP001291_1 320 LKSEFLASTTHELRTPLNGIIGFLKLILDGM-------ADDSEEQ-- 357

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le ++++a +ll+Lind+Ldl++ieag
CP001291_1 358 ----------QEFLEEAHKSALHLLNLINDILDLAKIEAG 387

CP001291_1061: domain 1 of 1, from 604 to 670: score 95.0, E = 1.8e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHELRTPL+aI+g++++L ++++ l+ee+
CP001291_1 604 AKSEFLASMSHELRTPLNAILGFTQVLGRNSY--------LTEED-- 640

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i r++e+ll+Lind+L++s+ieag
CP001291_1 641 ----------KTNLDIISRSGEHLLDLINDILEMSKIEAG 670

CP001291_3675: domain 1 of 1, from 1252 to 1320: score 92.9, E = 7.2e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ +a+lL ++++ +l+++q
CP001291_3 1252 YKSEFLANMSHELRTPLNSLLILAKLLADNVE------NNLTPKQ-- 1290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey ti++++ ll Lind+Ldl++ie+g
CP001291_3 1291 ----------VEYAATIHSSGSDLLGLINDILDLAKIESG 1320

CP001291_1391: domain 1 of 1, from 176 to 244: score 92.4, E = 9.8e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fla++sHELRTP++aI+g++++Ll+++ ++l++ q
CP001291_1 176 LKSQFLATMSHELRTPINAIMGFSQMLLRRY------PEPLTPAQ-- 214

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++i + ++ ll L+nd+Ld+s+ieag
CP001291_1 215 ----------TDLVQRIFDNSKNLLTLLNDVLDFSKIEAG 244

CP001291_2774: domain 1 of 1, from 272 to 337: score 92.3, E = 1.1e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++ HELRTPL+a+ g++ lLl+ t+l+ +q
CP001291_2 272 AKSQFLAMVGHELRTPLNAVTGMTGLLLD---------TKLTNQQ-- 307

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++++i++++e ll +in++Ld+++iea+
CP001291_2 308 ----------REFINIIRNSGETLLTMINNILDFAKIEAN 337

CP001291_1938: domain 1 of 1, from 419 to 487: score 92.0, E = 1.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f++n+sHELRTPL I+ ++e+L e++ ++l++ +r
CP001291_1 419 AKSQFISNVSHELRTPLFNIKSFIETLTEFG-------EDLTDNER- 457

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+let+ +e++rl rL+nd+Ldlsr+e+
CP001291_1 458 ----------REFLETANHETDRLTRLVNDVLDLSRLESS 487

CP001291_4438: domain 1 of 1, from 814 to 882: score 87.1, E = 3.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f++ +sHELRTPLtaI g + lL ++++ ++++e+
CP001291_4 814 MKKDFISVVSHELRTPLTAIHGSLGLLAAGVY------DNKPEKG-- 852

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++++ +++rl rL+nd+Ldl r+e+g
CP001291_4 853 ----------KKMIHIAATQTDRLVRLVNDILDLGRLESG 882

CP001291_1977: domain 1 of 1, from 1283 to 1351: score 84.2, E = 2.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ +sHE+RTPLt+I+gyaelL++ ++++lse+++
CP001291_1 1283 LKTQFIDVVSHEFRTPLTSILGYAELLER-------HSDKLSEQKK- 1321

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl++i+ +++rl++Li+d+L +sr+e+g
CP001291_1 1322 ----------NNYLHKIRIAGQRLSDLIEDVLCISRAESG 1351

CP001291_0114: domain 1 of 1, from 1437 to 1502: score 79.3, E = 5.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP++aI+g+++lL +
CP001291_0 1437 AKSEFLANMSHEIRTPMNAILGFCDLLNH---------LVTDNRG-- 1472

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ i ++++ ll+Lind+Ldls+ieag
CP001291_0 1473 ----------QFYLSAIASAGKTLLALINDILDLSKIEAG 1502

CP001291_1931: domain 1 of 1, from 388 to 456: score 77.2, E = 2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHELRTPL++I+g+++lLle++ +e++ +
CP001291_1 388 AKTAFLASMSHELRTPLNGILGLSQLLLEDA-------QEAGYLD-- 425

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e l+ i +++ +ll Li+d+Ld+s+ieag
CP001291_1 426 ---------FIEDLQQINQSGLHLLGLIEDILDISKIEAG 456

CP001291_3673: domain 1 of 1, from 247 to 314: score 75.8, E = 4.9e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ flan+sHELRTP++ ++ ++e+L +++se+++
CP001291_3 247 ERRAFLANVSHELRTPVSNVKVTLEALSI---------GAASEPELC 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++t+++e++rl+rLi+dlLdl r+eag
CP001291_3 285 ----------DRFIQTAQNEINRLSRLIQDLLDLGRLEAG 314

CP001291_1270: domain 1 of 1, from 197 to 264: score 73.7, E = 1.9e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELR+P++ I++++e++l+ ++e+ + +
CP001291_1 197 SLKQFTADASHELRNPIAMIQTNVEMALA--------YPEAETQLQ- 234

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++i+r ++rl +L+ndlL l+r ++g
CP001291_1 235 ----------QRQLKVIERLTQRLGNLVNDLLFLARSDSG 264

CP001291_0589: domain 1 of 1, from 339 to 407: score 72.4, E = 4.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef+ +sHEL+ PLt+++g+++lL+e ++ +el+e q
CP001291_0 339 LKDEFFTCISHELKSPLTSVIGLSSLLKE------QKLGELNERQ-- 377

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+e i++++++l L+ndlLdl+r+e+
CP001291_0 378 ----------VHYTELIYHSGRQLMTLVNDLLDLTRLETR 407

CP001291_5109: domain 1 of 1, from 380 to 451: score 72.4, E = 4.6e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ksefl+n+sHEL TPLt ++g+a +Ll ++ ++ + ls+e++
CP001291_5 380 SKSEFLSNISHELLTPLTCVIGLAGTLLHWS----GEQSSLSPEKQ- 421

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+e+i+ ++ l +Lind+Ld+s + +g
CP001291_5 422 ----------KKYIESIQANGKKLMDLINDILDYSSLTSG 451

CP001291_3999: domain 1 of 1, from 255 to 322: score 72.1, E = 5.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++++sHELRTPLt ++gy++ l+++ ++l++ q
CP001291_3 255 HQRQLVSDVSHELRTPLTIVSGYLQSTLRRG-------SNLTPTQ-- 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+le++ ea+r +L++dlL l+r ++g
CP001291_3 293 ----------REALEIAGMEADRTIKLLQDLLNLARVDSG 322

CP001291_1091: domain 1 of 1, from 142 to 210: score 70.3, E = 1.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+f ++++HE+RTP+t+I+g a+lL+e + + +e+r+
CP001291_1 142 LKSRFWSMVAHEFRTPMTTILGSAQLLEE--------LHLQLPEERR 180

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
reyl+ i+++++++++L+nd+L r e+g
CP001291_1 181 ----------REYLSLIQQSIRSMENLLNDVLCVGRVESG 210

CP001291_4869: domain 1 of 1, from 580 to 646: score 70.1, E = 2.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla lsHELR PL+ I+g a+lL + ++l + ++
CP001291_4 580 IKDEFLAVLSHELRSPLNPILGWAKLLNT---------HTLEPATH- 616

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l++i+r a+ +Li+dlLd sri g
CP001291_4 617 ----------QKALSIIERNAQLQAELIEDLLDVSRILRG 646

CP001291_2771: domain 1 of 1, from 1105 to 1171: score 69.5, E = 3e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla lsHELR PL+ I+g a+lL+ + + +
CP001291_2 1105 IKDEFLAVLSHELRSPLNPILGWAQLLRS---------GSFDKANQ- 1141

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++le+i+r a+ +Li+dlLd sri g
CP001291_2 1142 ----------NKALEIIERNAKLQAQLIEDLLDVSRILRG 1171

CP001291_3492: domain 1 of 1, from 445 to 512: score 69.2, E = 3.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s ++a HELRTPL++I+ +e L + ++++s+e r
CP001291_3 445 TRSNLVAITGHELRTPLSTIQVCLESLAT--------EPDMSPELR- 482

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+t+l++aer++ L++d+L+ls++e+g
CP001291_3 483 ----------QVMLNTALQDAERMRTLVQDFLTLSQLESG 512

CP001291_0037: domain 1 of 1, from 162 to 230: score 67.2, E = 1.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef+++lsH++R+PL++I++ a lL++ + + l+ eq+
CP001291_0 162 LKTEFVSMLSHDFRNPLNTILLSAGLLEDSS-------DRLTKEQQ- 200

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++ i+ +++ +++L+ ++L + r+++g
CP001291_0 201 ----------LTYFQMIRTAIKDMDQLLTEVLIIGRADSG 230

CP001291_3515: domain 1 of 1, from 199 to 263: score 67.1, E = 1.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++l HELRTPLt+I+++ae+L++ l ++
CP001291_3 199 SRDRAFSDLTHELRTPLTSISLLAEALQK----------RLQNPE-- 233

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ +l+e+erl rL++d L++s++++
CP001291_3 234 ----------RRWVDQMLKEIERLMRLVQDWLEISQLQED 263

CP001291_0674: domain 1 of 1, from 196 to 262: score 65.6, E = 3.8e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELR+PL+aIr +a+ l ++ ++ q+
CP001291_0 196 QLQRFTADASHELRNPLAAIRNNAQFGLL---------EPIDPHQQ- 232

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ le i++ a+++ L+++lL l+r e
CP001291_0 233 ----------QTSLENIDQIAQSMGILVSNLLFLARNEGK 262

CP001291_0933: domain 1 of 1, from 220 to 285: score 65.4, E = 4.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+++++HELRTPL++++ ++e + ++ ee
CP001291_0 220 QMQQFTSDAAHELRTPLAVLQSTIEEMGL---------AKDLEEV-- 255

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le+++r+ +rl++L+ dlL +s+i+++
CP001291_0 256 ----------EQNLEIMKRQNRRLSSLVTDLLLISKIDQQ 285

CP001291_4180: domain 1 of 1, from 241 to 307: score 62.9, E = 2.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ ++sHELRTPLt+I+g + ++l + +++e+
CP001291_4 241 HQQRFTGDASHELRTPLTVIKGRIGVALS---------QLRTPED-- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+e l+ +++e++rl rL n lL l+r+e+
CP001291_4 277 ---------YQETLQALEQEVDRLIRLANSLLFLTRLEQK 307

CP001291_1426: domain 1 of 1, from 214 to 281: score 62.5, E = 2.8e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efl +lsHELRTPLtaI+g ++lL++ + + + +
CP001291_1 214 IKDEFLMMLSHELRTPLTAILGWSQLLKK---------GLITQKNK- 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++leti+r a+ ++L++dlLd sri a+
CP001291_1 251 ---------VDKALETIERNAKLESKLVDDLLDVSRILAN 281

CP001291_1932: domain 1 of 2, from 351 to 419: score 62.5, E = 3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f++n+sHELRTPLt I+g +e+Ll ++ ls +
CP001291_1 351 AKTVFFSNISHELRTPLTLILGPIEALLH------SDESSLSKGD-- 389

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l ++r + rl++L+n lL++sr+eag
CP001291_1 390 ----------RISLIMAQRNVLRLQKLVNTLLEFSRLEAG 419

CP001291_2777: domain 1 of 1, from 144 to 208: score 61.8, E = 4.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++++l HELRTPLt++rgy+e L + + + +
CP001291_2 144 RRRELISDLTHELRTPLTVVRGYLEQLAD---------DSIEPST-- 179

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ ++ +e++rl+rL dl +ls++eag
CP001291_2 180 -----------ELYLKLVKETRRLERLTHDLQELSKAEAG 208

CP001291_4453: domain 1 of 1, from 149 to 217: score 61.2, E = 7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+ ++ +sHE+R+PLt I++ a+lL+ ++ +++see++
CP001291_4 149 LKSQYISLASHEFRNPLTNIKAWAQLLQLYG-------HTWSEEKQ- 187

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le+i+ +ae++++L++d+ +l r +
CP001291_4 188 ----------QKSLERIQIAAEQMNQLLEDISTLGRTDID 217

CP001291_4896: domain 1 of 1, from 199 to 266: score 60.6, E = 9.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELR+PLtaI++ +e++l+ + + +++
CP001291_4 199 QLKQFTADASHELRNPLTAIQTSIEVMLN-------HPERVHPKD-- 236

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l + +++e+++rL +dlL l+r ++
CP001291_4 237 ----------MKKLVAVASATEQMSRLTQDLLFLARTKTP 266

CP001291_0974: domain 1 of 1, from 27 to 94: score 60.1, E = 1.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fla ++HELR P+++I+g+ +l+l++l e +ee+
CP001291_0 27 FKTGFLARIAHELRSPISSIMGLHQLILNDL-------CESPEEE-- 64

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++ + ++++ ll++++++ ++s+ie g
CP001291_0 65 ----------KESIQQAFESTKKLLKIVDEIITISKIEYG 94

CP001291_4517: domain 1 of 1, from 212 to 279: score 59.3, E = 2.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELR PLt+I++ +e++++ + + + +
CP001291_4 212 QLRQFTADASHELRSPLTVIKTSVEVMQT-------HPERIHPAD-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ il+++++++ L+++lL l+r e
CP001291_4 250 ----------VEKLKGILSATNQMSYLVENLLLLARTERF 279

CP001291_1118: domain 1 of 1, from 221 to 282: score 57.7, E = 6.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a+++HELRTPL+aIr+++e +l+ + lse++
CP001291_1 221 QMQQFTADAAHELRTPLAAIRATVESALM--------MPILSEKES- 258

peLRledpeyreyletilreaerllrLindlLdl<-*
r+ l+ti r++ rl++L+ dlL l
CP001291_1 259 ----------RDTLKTINRQTVRLSNLVADLLML 282

CP001291_4332: domain 1 of 1, from 1051 to 1119: score 57.5, E = 7.8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L+ PL aI ++e ++e+l+ + l++e
CP001291_4 1051 ELDQFAYVVSHDLKAPLRAIANLSEWIEEDLE------GQLPPEN-- 1089

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+ +++ ++r+++Lin +L++sr +
CP001291_4 1090 ----------QEQLQLLRQRVHRMENLINGVLEYSRVGRK 1119

CP001291_1932: domain 2 of 2, from 1165 to 1233: score 56.6, E = 1.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L+ PL aI +++ ++e+l ++ ++e
CP001291_1 1165 ELDQFTYIVSHDLKAPLRAIANLSQWIEEDL------SDIIPPES-- 1203

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +e +++ + r+++Lin+lLd++ri+
CP001291_1 1204 ----------QQQIELLRQRVYRMDQLINNLLDYARIGRS 1233

CP001291_5063: domain 1 of 1, from 256 to 321: score 55.9, E = 2.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHELR PL+aI+ +a++ l t+ ++
CP001291_5 256 QLQRFTANASHELRAPLAAILSNAQMGLL---------TPNQAQS-- 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r le++ + +++++ L+ndlL l+r e
CP001291_5 292 ----------RHRLEKVVELTKSMSVLVNDLLFLARYEGV 321

CP001291_4989: domain 1 of 1, from 1030 to 1098: score 54.4, E = 5.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+L PL I+ y +lL + + l+++
CP001291_4 1030 DLEQFAYIVSHDLQEPLGIISSYGQLLHR------HCQKQLDPKA-- 1068

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y++++l++++r++++i+dlL++sri++
CP001291_4 1069 ----------ETYIDRMLNSVKRMRQQIEDLLQYSRIGTR 1098

CP001291_4106: domain 1 of 1, from 382 to 455: score 53.2, E = 1.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fl ++sHELRTP+++I+++ae+L++ l+ ++++ l + r
CP001291_4 382 LKDNFLKTISHELRTPMSSILLAAETLEKLLE---QEESSLKDSPR- 424

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + l++ +++ ++ ++L+ndlL+l i+a
CP001291_4 425 ---------FNQVLDIFKESCQQQNKLVNDLLTLCYIDAD 455

CP001291_3672: domain 1 of 1, from 344 to 412: score 52.0, E = 2.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L+ PL aI ++ L e+l+ ++l+ee+
CP001291_3 344 ELDQFVYVASHDLKSPLRAIANISQWLAEDLE------DKLTEET-- 382

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ ++ + r+++Lin lL + r +
CP001291_3 383 ----------QHQLDLLQGRVLRMEKLINGLLYYYRVGRV 412

CP001291_4892: domain 1 of 1, from 372 to 440: score 50.7, E = 6.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f +sH+L PL ++ g++++Ll+ ++ ++l+e+
CP001291_4 372 ELEAFSYRVSHDLQAPLRVLDGFSQILLKTYE------SKLDEKG-- 410

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl++i+ +r+ +Li+ lL+ls i++
CP001291_4 411 ----------QYYLKRIRANCQRMGELIRSLLQLSHIGSS 440

CP001291_4956: domain 1 of 1, from 478 to 546: score 50.7, E = 6.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L+ PL aI ++e ++e+l +e+ ++++
CP001291_4 478 ELDQFAYVVSHDLKAPLRAIAQLSEWIEEDL-------GEQLPPDN- 516

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+ ++r + rl+ L+n lL++sr +
CP001291_4 517 ----------REQLNLLRRRVYRLEGLVNGLLEYSRVGRT 546

CP001291_4838: domain 1 of 1, from 244 to 306: score 50.3, E = 8.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k ++l l ELR PLt+++g+a+++l +++ + l+++q
CP001291_4 244 IKLKLLKQLTQELRAPLTSVIGMASVILGGVF------GSLTSKQ-- 282

peLRledpeyreyletilreaerllrLindlLdl<-*
+eyl++i++++++l++L++++L l
CP001291_4 283 ----------KEYLDIIYNSGQQLNSLVDEILRL 306

CP001291_0491: domain 1 of 1, from 144 to 212: score 49.5, E = 1.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f++ l H+LRTPL a ++ l++++l+ +els+e
CP001291_0 144 MREDFVSRLTHDLRTPLVAADRMLILMQDGLF------GELSPEM-- 182

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l t+ r+ + ll+L+n++L+ r ea
CP001291_0 183 ----------KEALVTMARSNRNLLELVNNMLEVYRYEAD 212

CP001291_3826: domain 1 of 1, from 203 to 278: score 48.2, E = 3.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELRTP+++I+ +a++ l ++++ + e +
CP001291_3 203 QLKRFTADASHELRTPISGILSTAQVGLL-------ISEDNNQESSQ 242

peLR.ledpeyreyletilreaerllrLindlLdlsrieag<-*
L +l + l+ i + a++++ L+n+lL l+r e +
CP001291_3 243 SLLFqL-----QSHLKDIAQIAQSMRTLVNNLLFLARNEGQ 278

CP001291_2299: domain 1 of 1, from 524 to 592: score 48.1, E = 3.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ +sH+L+ PL +I ya +le++ +e+ e ++
CP001291_2 524 DLDAFAYIASHDLKEPLRGIHNYANFILEDY-------GEQLEREA- 562

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l++i r ++r+++L++ lL +sr +
CP001291_2 563 ----------VEQLQSITRLTQRMDHLLDSLLHFSRVGRT 592

CP001291_0659: domain 1 of 1, from 652 to 719: score 46.8, E = 8.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++++++H+L++ L I++ a+lL+ ++ ++l+e++
CP001291_0 652 SIGTLASGIAHDLNNILQPILFIAHLLRQKF-------PHLDEQT-- 689

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l ++++++r +L++++L ++ e+g
CP001291_0 690 ----------RERLALLEDSSKRGTSLVRQILSFACGEEG 719

CP001291_2203: domain 1 of 1, from 230 to 298: score 46.8, E = 8.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+e + +sHE TPL+++++++e+L+e++ + ls++ +
CP001291_2 230 LKDEIITVISHEAGTPLATMKLAIEMLQERQ-------DQLSPDSQ- 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++++e +rl++Li + +l ++ +
CP001291_2 269 ----------KRYWGILKQEWQRLQDLIGSIKTLQQLKSS 298

CP001291_0427: domain 1 of 1, from 335 to 398: score 46.6, E = 9.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +++++sH+L++ Lt I+g+a+lL ++l + +eq+
CP001291_0 335 IIGSLASGISHDLNNILTPILGMAQLLPRKL--------PHADEQI- 372

peLRledpeyreyletilreaerllrLindlLdlsr<-*
++++++i+ a+r +L++++L++sr
CP001291_0 373 ----------QQMFKIIEINAQRGASLLRQILTFSR 398

CP001291_5010: domain 1 of 1, from 213 to 284: score 46.1, E = 1.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f+ ++sH+LR PL I g++ +L++el l+ ++
CP001291_5 213 EIDTFFYSVSHDLRAPLRHINGFLNALRKEL-------NQLNNVEL- 251

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yle+i+++++ +++Li+ lL+lsr+e
CP001291_5 252 -------SKVNHYLEIIDESSQKMSQLIDGLLTLSRLERR 284

CP001291_2629: domain 1 of 1, from 181 to 247: score 43.3, E = 8.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ l nl H+LR+PLta+r++ +lLl+ l++e+
CP001291_2 181 HQRDQLDNLLHQLRNPLTALRTFGKLLLK---------RFLPDEKD- 217

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ i+re++r+++L++++ + s i +
CP001291_2 218 ----------QNVIKGIIRESDRIQDLLRQFEQQSDILPQ 247

CP001291_1389: domain 1 of 1, from 609 to 677: score 42.4, E = 1.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L+ PL aI ++ L+e+l +++l+e++
CP001291_1 609 ELDQFAYVASHDLKAPLRAIANLSVWLEEDL------RDKLDEDT-- 647

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r e ++ ++r+++Lin lL++sr +
CP001291_1 648 ----------RYQMELLRGRVHRMEALINGLLQYSRVGRL 677

CP001291_0035: domain 1 of 1, from 529 to 597: score 40.3, E = 5.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ +sH+L PL+ + y++lL+ ++ +++l+e+
CP001291_0 529 ELKKFAYVASHDLQEPLNQVANYVQLLEFRY------RENLDEDA-- 567

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ + + + ++ Li+d+L +s+ + +
CP001291_0 568 ----------QEFIQFAVDGVSLMQTLIDDVLAYSKVDMQ 597

CP001291_2631: domain 1 of 1, from 501 to 568: score 38.8, E = 1.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++++++H++++ Lt I+g+++lL + + +e +
CP001291_2 501 SLGRLASGIAHDFNNILTPILGASQLLPV--------LSSQKDESI- 538

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +i+ a+r +Li +lL ++r +
CP001291_2 539 ----------QKLLTSIETNAKRGTELIKQLLSFARGIEV 568

CP001291_4941: domain 1 of 1, from 164 to 236: score 38.8, E = 1.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++ la+l+H+LR PLta + ++e+L+ ++++ r+
CP001291_4 164 FKDQVLAMLAHDLRSPLTAASIAVETLEL--------ANNQPDSPRI 202

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
L +++ + +++ + ++rLi d+L+ s+ +
CP001291_4 203 VQLK------EQLYQQTRKQFRIMNRLITDILQASKSINA 236

CP001291_2214: domain 1 of 1, from 141 to 209: score 33.0, E = 6.5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f++++ H++R L+ I++ +lL+++l t +e ++
CP001291_2 141 LRARFFSTMCHQFRSFLNIISFSNSLLRRYL-------TSDTETKK- 179

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl+ i+ ++e+++ L++ l l + e +
CP001291_2 180 ----------LPYLDNIQTAVEQISTLLDKLIFLGKTEVN 209

CP001291_4973: domain 1 of 1, from 274 to 317: score 30.4, E = 3.7e-08
*->eflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeL
e+l +l HE+RTPLt+Ir+++ lL + +++l +e
CP001291_4 274 ELLQALTHEIRTPLTTIRTMTRLLMK--------RAKLAPEM----- 307

Rledpeyreyletilre<-*
+ le+i++e
CP001291_4 308 -------LKCLEVIDQE 317

CP001291_1392: domain 1 of 1, from 134 to 202: score 28.4, E = 1.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f++ l H+LRTPL a ++ l++ +++ ++ +++
CP001291_1 134 QRENFVSCLTHDLRTPLLAANRMLNLIQQGVF------GDVNDQM-- 172

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i+++ + ll ++n lL+ e+g
CP001291_1 173 ----------DNAVVNIIKSNDNLLTMLNTLLEVHCYEEG 202


Histogram of all scores:
score obs exp (one = represents 16 sequences)
----- --- ---
-15 7 0|=
-14 33 0|===
-13 115 3|*=======
-12 278 119|=======*==========
-11 561 619|==================================== *
-10 878 1149|======================================================= *
-9 923 1187|==========================================================*
-8 815 888|=================================================== *
-7 610 560|==================================*====
-6 375 322|====================*===
-5 214 176|==========*===
-4 139 94|=====*===
-3 76 49|===*=
-2 62 26|=*==
-1 32 13|*=
0 21 7|*=
1 12 3|*
2 5 1|*
3 3 1|*
4 0 0|
5 3 0|=
6 1 0|=
> 7 64 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 500.1018
P(chi-square) = 0

Total sequences searched: 5227

Whole sequence top hits:
tophits_s report:
Total hits: 58
Satisfying E cutoff: 58
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 59
Satisfying E cutoff: 59
Total memory: 44K


Acknowledgements:

This research is funded by:

Developed by: