Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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14 projects found  

1 accessions found for Chloroflexus aggregans DSM 9485  

Data for CP001337  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001337.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001337_0969 CDS_1241890-1244133 101.4 2e-28 1
CP001337_3155 CDS_3941115-3938473 93.0 4.8e-26 1
CP001337_0945 CDS_1214818-1212641 92.0 9e-26 1
CP001337_3636 CDS_4572562-4575303 91.7 1.1e-25 1
CP001337_0101 CDS_146715-144424 90.6 2.2e-25 1
CP001337_2541 CDS_3216357-3218984 90.2 2.9e-25 1
CP001337_3047 CDS_3815917-3819975 88.9 6.7e-25 1
CP001337_0808 CDS_1043131-1046754 87.3 2e-24 1
CP001337_0482 CDS_612743-614407 86.9 2.6e-24 1
CP001337_0012 CDS_21300-12949 86.0 4.5e-24 2
CP001337_2136 CDS_2701378-2703048 85.0 8.6e-24 1
CP001337_2598 CDS_3285146-3286786 82.7 4e-23 1
CP001337_1653 CDS_2082008-2084740 82.1 5.7e-23 1
CP001337_0436 CDS_554211-552739 80.9 1.3e-22 1
CP001337_1944 CDS_2466539-2464281 79.2 3.9e-22 1
CP001337_1948 CDS_2472199-2469794 78.7 5.5e-22 1
CP001337_2656 CDS_3368120-3369910 74.0 1.1e-20 1
CP001337_0533 CDS_664864-666447 74.0 1.2e-20 1
CP001337_2542 CDS_3218981-3220159 73.9 1.2e-20 1
CP001337_0807 CDS_1041692-1043077 73.6 1.5e-20 1
CP001337_2119 CDS_2684039-2682591 71.4 6.1e-20 1
CP001337_1056 CDS_1357901-1356609 70.6 1.1e-19 1
CP001337_1989 CDS_2518097-2514492 70.5 1.1e-19 1
CP001337_0384 CDS_486829-485480 69.5 2.2e-19 1
CP001337_1138 CDS_1456539-1457603 67.8 6.7e-19 1
CP001337_0630 CDS_799301-796467 66.8 1.2e-18 1
CP001337_0239 CDS_305790-306965 65.9 2.3e-18 1
CP001337_1723 CDS_2179181-2177049 64.6 5.1e-18 1
CP001337_2623 CDS_3323591-3322182 63.0 1.5e-17 1
CP001337_0933 CDS_1197039-1196083 61.0 5.4e-17 1
CP001337_1626 CDS_2048355-2050535 60.8 6.2e-17 1
CP001337_3171 CDS_3957596-3959026 59.1 1.9e-16 1
CP001337_3387 CDS_4268365-4266956 59.0 2e-16 1
CP001337_0473 CDS_602136-599956 52.5 1.4e-14 1
CP001337_0590 CDS_750132-746608 49.8 8.3e-14 1
CP001337_3198 CDS_4000407-4001477 49.8 8.5e-14 1
CP001337_2590 CDS_3278930-3276930 49.1 1.3e-13 1
CP001337_0541 CDS_677301-676051 47.9 2.9e-13 1
CP001337_2146 CDS_2716266-2714839 46.7 6.3e-13 1
CP001337_2450 CDS_3084682-3087066 46.2 8.4e-13 1
CP001337_0381 CDS_480032-482413 45.9 1e-12 1
CP001337_3100 CDS_3879899-3878835 42.3 1.1e-11 1
CP001337_1096 CDS_1406671-1408602 33.9 2.7e-09 1
CP001337_0827 CDS_1072200-1071046 32.7 5.7e-09 1
CP001337_0242 CDS_313857-311245 31.8 1.1e-08 1
CP001337_3150 CDS_3931288-3933870 30.8 2.1e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001337_0969 1/1 282 348 .. 1 87 [] 101.4 2e-28
CP001337_3155 1/1 635 703 .. 1 87 [] 93.0 4.8e-26
CP001337_0945 1/1 481 548 .. 1 87 [] 92.0 9e-26
CP001337_3636 1/1 421 486 .. 1 87 [] 91.7 1.1e-25
CP001337_0101 1/1 526 594 .. 1 87 [] 90.6 2.2e-25
CP001337_2541 1/1 627 695 .. 1 87 [] 90.2 2.9e-25
CP001337_3047 1/1 851 919 .. 1 87 [] 88.9 6.7e-25
CP001337_0808 1/1 717 785 .. 1 87 [] 87.3 2e-24
CP001337_0482 1/1 307 373 .. 1 87 [] 86.9 2.6e-24
CP001337_0012 2/2 2545 2613 .. 1 87 [] 85.9 5e-24
CP001337_2136 1/1 173 241 .. 1 87 [] 85.0 8.6e-24
CP001337_2598 1/1 315 383 .. 1 87 [] 82.7 4e-23
CP001337_1653 1/1 395 463 .. 1 87 [] 82.1 5.7e-23
CP001337_0436 1/1 261 328 .. 1 87 [] 80.9 1.3e-22
CP001337_1944 1/1 508 576 .. 1 87 [] 79.2 3.9e-22
CP001337_1948 1/1 430 496 .. 1 87 [] 78.7 5.5e-22
CP001337_2656 1/1 360 428 .. 1 87 [] 74.0 1.1e-20
CP001337_0533 1/1 305 370 .. 1 87 [] 74.0 1.2e-20
CP001337_2542 1/1 169 237 .. 1 87 [] 73.9 1.2e-20
CP001337_0807 1/1 249 317 .. 1 87 [] 73.6 1.5e-20
CP001337_2119 1/1 244 316 .. 1 87 [] 71.4 6.1e-20
CP001337_1056 1/1 190 255 .. 1 87 [] 70.6 1.1e-19
CP001337_1989 1/1 595 666 .. 1 87 [] 70.5 1.1e-19
CP001337_0384 1/1 228 292 .. 1 87 [] 69.5 2.2e-19
CP001337_1138 1/1 128 192 .. 1 87 [] 67.8 6.7e-19
CP001337_0630 1/1 461 536 .. 1 87 [] 66.8 1.2e-18
CP001337_0239 1/1 152 216 .. 1 87 [] 65.9 2.3e-18
CP001337_1723 1/1 472 542 .. 1 87 [] 64.6 5.1e-18
CP001337_2623 1/1 226 290 .. 1 87 [] 63.0 1.5e-17
CP001337_0933 1/1 76 146 .. 1 87 [] 61.0 5.4e-17
CP001337_1626 1/1 495 564 .. 1 87 [] 60.8 6.2e-17
CP001337_3171 1/1 254 321 .. 1 87 [] 59.1 1.9e-16
CP001337_3387 1/1 249 315 .. 1 87 [] 59.0 2e-16
CP001337_0473 1/1 477 545 .. 1 87 [] 52.5 1.4e-14
CP001337_0590 1/1 928 996 .. 1 87 [] 49.8 8.3e-14
CP001337_3198 1/1 122 186 .. 1 87 [] 49.8 8.5e-14
CP001337_2590 1/1 429 495 .. 1 87 [] 49.1 1.3e-13
CP001337_0541 1/1 184 252 .. 1 87 [] 47.9 2.9e-13
CP001337_2146 1/1 246 312 .. 1 87 [] 46.7 6.3e-13
CP001337_2450 1/1 431 496 .. 1 87 [] 46.2 8.4e-13
CP001337_0381 1/1 422 488 .. 1 87 [] 45.9 1e-12
CP001337_3100 1/1 124 192 .. 1 87 [] 42.3 1.1e-11
CP001337_1096 1/1 275 341 .. 1 87 [] 33.9 2.7e-09
CP001337_0827 1/1 159 235 .. 1 87 [] 32.7 5.7e-09
CP001337_0242 1/1 491 557 .. 1 87 [] 31.8 1.1e-08
CP001337_3150 1/1 484 550 .. 1 87 [] 30.8 2.1e-08

Alignments of top-scoring domains:
CP001337_0969: domain 1 of 1, from 282 to 348: score 101.4, E = 2e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHELRTPL+a++g+a+lL + d +l++ q
CP001337_0 282 AKSAFLANVSHELRTPLHAVLGFAQLLAN--------DNNLTPTQ-- 318

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl +i r++e+llrLin++Ldl++ieag
CP001337_0 319 ----------QEYLAIINRSGEHLLRLINEVLDLAKIEAG 348

CP001337_3155: domain 1 of 1, from 635 to 703: score 93.0, E = 4.8e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef+ ++sHELRTP+taI+g+++lL + +g + l++ q
CP001337_3 635 MKNEFIGTMSHELRTPMTAIKGFTQLLAM------GGLGQLNDTQ-- 673

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ti++ +er+ +Lind+L++++ie+g
CP001337_3 674 ----------REFVNTIYNNTERMINLINDVLEITKIESG 703

CP001337_0945: domain 1 of 1, from 481 to 548: score 92.0, E = 9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef+ +sHELRTPLt+I+gy+e+Ll+ +++l++e +
CP001337_0 481 LKDEFIGIVSHELRTPLTSILGYTEILLN--------RQDLDSESQ- 518

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l t+ +ea+rl +++ dlLd sr+eag
CP001337_0 519 ----------REFLLTVSNEADRLHKMVKDLLDVSRLEAG 548

CP001337_3636: domain 1 of 1, from 421 to 486: score 91.7, E = 1.1e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ fla++sHE+RTPL+a+++ +e+Ll+ + l++eq
CP001337_3 421 ARTSFLAAISHEMRTPLNAVIASTEVLLR---------GGLTDEQ-- 456

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++eti+ +e+ll Lin++Ldls++eag
CP001337_3 457 ----------RDFVETIRIGSESLLTLINNVLDLSKLEAG 486

CP001337_0101: domain 1 of 1, from 526 to 594: score 90.6, E = 2.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fla++sHELRTPLt+I+gy+++L++ ++ +els+e
CP001337_0 526 LKTTFLATVSHELRTPLTSIIGYTDVLRR------GILGELSPEV-- 564

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l +++++ l r+ind+L++srieag
CP001337_0 565 ----------QETLGYMRQASLNLMRQINDILEFSRIEAG 594

CP001337_2541: domain 1 of 1, from 627 to 695: score 90.2, E = 2.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+fla++sHELRTPL+aI+g++ +Ll++ + ++l++ q
CP001337_2 627 RKSDFLASISHELRTPLNAIIGFSTVLLDDTE------QPLTPTQ-- 665

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re +++i r ++ ll+Lin+lLdl+rieag
CP001337_2 666 ----------REDVQSINRNGRFLLHLINELLDLARIEAG 695

CP001337_3047: domain 1 of 1, from 851 to 919: score 88.9, E = 6.7e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+eflan+sHELRTPL++I++++e Lleel +++l+e q
CP001337_3 851 VKDEFLANMSHELRTPLNTILTLSESLLEEL------RGPLNERQ-- 889

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++ i+ ++++ll Lind+Ld ++ieag
CP001337_3 890 ----------RASIQLIETSGRHLLTLINDVLDVAKIEAG 919

CP001337_0808: domain 1 of 1, from 717 to 785: score 87.3, E = 2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef+a +sHELRTPLt+Irg + l+ ++ +el++
CP001337_0 717 MKNEFVAVVSHELRTPLTSIRGSLGLIAGGVA------GELPPRA-- 755

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++++l+ +erl rLind+Ld+++ie+g
CP001337_0 756 ----------AAMIDIALKNSERLVRLINDILDIEKIESG 785

CP001337_0482: domain 1 of 1, from 307 to 373: score 86.9, E = 2.6e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHELRTPL+aI+gya+lL ++ ++ +
CP001337_0 307 AKSAFLATMSHELRTPLNAILGYAQLLHI---------QKVVPDSH- 343

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yle+il ++++ll+Li+++Ld++rie+g
CP001337_0 344 ----------QPYLERILTSGRHLLSLISNVLDFARIEQG 373

CP001337_0012: domain 2 of 2, from 2545 to 2613: score 85.9, E = 5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f++++sHELRTPLtaI+gy+++Ll + +l+++q
CP001337_0 2545 EKRQFISDVSHELRTPLTAIKGYVDVLLL------TASLNLTPDQ-- 2583

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl++i++ ++rl++Li+d+L++sr ++
CP001337_0 2584 ----------LSYLNIIKNNTNRLRALIEDILEFSRPDSK 2613

CP001337_2136: domain 1 of 1, from 173 to 241: score 85.0, E = 8.6e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla++sHE RTPLtaI+g++++L+++l ++lseeq
CP001337_2 173 LKDEFLASMSHEVRTPLTAILGLVDVLRAQL------VGPLSEEQ-- 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i++ +++ll+Lind Ld+++ieag
CP001337_2 212 ----------MGAINGIKQGGQHLLALINDYLDIAKIEAG 241

CP001337_2598: domain 1 of 1, from 315 to 383: score 82.7, E = 4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f++ +sHELRTP++ I+g+ae++l+ d+ + eq
CP001337_2 315 RQNTFISVISHELRTPVSIIKGFAETMLR-------PDGQFTVEQ-- 352

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l++i +ea+rl r+i+dlLd sri ag
CP001337_2 353 ---------YREALQVIGEEADRLARQIQDLLDVSRIAAG 383

CP001337_1653: domain 1 of 1, from 395 to 463: score 82.1, E = 5.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHELRTPLtaI+gy++lL+ + ++ e++
CP001337_1 395 AKSTFLATMSHELRTPLTAIIGYSQLLEQLV-------DKGIYETV- 433

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++i+ ++++ll Lind+Ld+s+ieag
CP001337_1 434 ----------AHDVRRIRAAGNHLLTLINDILDISKIEAG 463

CP001337_0436: domain 1 of 1, from 261 to 328: score 80.9, E = 1.3e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHELRTPLt+++g++e+L++ ++ +++ +
CP001337_0 261 TQQRFVADVSHELRTPLTVMQGNLEVLER---------GASTDPAL- 297

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++e++ ++re+ rl r++ndlL l++ e++
CP001337_0 298 ---------VKEMVGDMRRETARLIRMVNDLLLLAQSETN 328

CP001337_1944: domain 1 of 1, from 508 to 576: score 79.2, E = 3.9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+ ++sHELRTPLt+Irg+a+lLl++l ++l+eeq
CP001337_1 508 AKTNFIGTISHELRTPLTVIRGNADLLLRGLA------GPLDEEQ-- 546

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++e+i+ a+ + +Li+++ +++ +++g
CP001337_1 547 ----------KSFVESIRLHANNMTNLISNVITIANLDSG 576

CP001337_1948: domain 1 of 1, from 430 to 496: score 78.7, E = 5.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++a+++HEL++PLt+++gya+lLl+ +l+e++
CP001337_1 430 ALGQLVAGVAHELNNPLTSVSGYAQLLLR--------KRALDEDT-- 466

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r le i+++a+r r++++lL ++r +
CP001337_1 467 ----------RSDLEQIHQQADRAGRIVRNLLMFAREHKP 496

CP001337_2656: domain 1 of 1, from 360 to 428: score 74.0, E = 1.1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHELRTPLtaI+gy+e+++++l + ++ ++
CP001337_2 360 AKSTFLAMMSHELRTPLTAILGYSEVIRDDL-------QIRGQNDL- 398

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+++ ++++ll+Lind+L+l+r+ea+
CP001337_2 399 ----------IADLDRVVLAGRHLLNLINDILELARLEAN 428

CP001337_0533: domain 1 of 1, from 305 to 370: score 74.0, E = 1.2e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f++++sHELR PLt Ir+ ae++l+ +++e+q
CP001337_0 305 RQLRFISSASHELRAPLTLIRASAEVALR---------NAKDEDQ-- 340

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l +l+e+++++rL++dlL+lsr+++g
CP001337_0 341 ----------RELLTDVLSESDHMRRLVDDLLTLSRLDSG 370

CP001337_2542: domain 1 of 1, from 169 to 237: score 73.9, E = 1.2e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla+lsHELRTPLt+++gy+el +++ ++l+++q
CP001337_2 169 MKDQFLATLSHELRTPLTSLLGYLELFDRGM------LGPLNPQQ-- 207

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++++++r++e l r++n+lL + ++
CP001337_2 208 ----------EEAIRVMRRSGEILARQLNNLLYFQEVRSR 237

CP001337_0807: domain 1 of 1, from 249 to 317: score 73.6, E = 1.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ ++ +++H+LR+P++ I++++ +L++ ++s+e+r
CP001337_0 249 LKNNLFGMVAHDLRNPVAIIQMMTAILRN-------PNLPRSPEER- 287

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ i+r++e++l L+ndlLdls+ie+g
CP001337_0 288 ----------QRLLDDIYRQTEHMLLLLNDLLDLSQIENG 317

CP001337_2119: domain 1 of 1, from 244 to 316: score 71.4, E = 6.1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks f+a++sHELRTPL+ I+g++ ++ e + + ++ ++
CP001337_2 244 SKSNFMATMSHELRTPLNIIIGFSTAMIE-------HPEMYGDVKI- 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
d + + + i+r++++ll Lind+Ldl++ieag
CP001337_2 283 ------DEQVLQDIAEIRRSGQHLLGLINDILDLAKIEAG 316

CP001337_1056: domain 1 of 1, from 190 to 255: score 70.6, E = 1.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++an+sHELRTPL+++++++e+L+ ++ ++
CP001337_1 190 ARRDLVANVSHELRTPLASLKLLVETLQS---------APPPDIA-- 225

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le + +e++ +L+++l +lsr+e+g
CP001337_1 226 ----------ARMLEQMAQEIDAVTQLVDELHELSRLESG 255

CP001337_1989: domain 1 of 1, from 595 to 666: score 70.5, E = 1.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fl+++sHEL TPL+ I g++ lLl+e a++++ + +
CP001337_1 595 LKSRFLSMVSHELQTPLNLIVGMSGLLLREI----AQSGDPLPSSI- 636

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l++i+ +a++l rLi+d+Ldl+ +ag
CP001337_1 637 ----------RDDLRRIYASARHLGRLISDVLDLASSDAG 666

CP001337_0384: domain 1 of 1, from 228 to 292: score 69.5, E = 2.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HELRTPLt+I+g++ ++l++++ +ls e+
CP001337_0 228 QRRQMIADIAHELRTPLTVIQGNLRAILDDVY-------PLSREE-- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +i++++ l+rL++dl++ls +++g
CP001337_0 266 -------------VGKIYEATVGLRRLVDDLRELSLADTG 292

CP001337_1138: domain 1 of 1, from 128 to 192: score 67.8, E = 6.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++ n++HELRTPL++I gy+e L + + l++e
CP001337_1 128 RRVTMIGNVAHELRTPLAGIEGYLEGLID---------GVLPAEA-- 163

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +++e++rl rL++dl +lsr eag
CP001337_1 164 -----------DTFLEMKHEVRRLHRLVDDLQTLSRVEAG 192

CP001337_0630: domain 1 of 1, from 461 to 536: score 66.8, E = 1.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldk..v.lagdtelsee
k+ef++ +sHELRTPL++I+g ++l l + ++++++l +++ ++
CP001337_0 461 LKDEFISIVSHELRTPLSSIQGSLQLVLGDDERgkTgL---GDRLPP 504

qrlpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
q+ r +l++ l+ ++rl rL+nd+Ld +ie+g
CP001337_0 505 QV-----------RTMLQISLNNTQRLIRLVNDILDVNKIEQG 536

CP001337_0239: domain 1 of 1, from 152 to 216: score 65.9, E = 2.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +la++ HELRTPL++I gy e L +++ +++ +
CP001337_0 152 RRLALLADVTHELRTPLATIGGYMEGLVDGV-------VSANPAT-- 189

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ilre++rl+rLi+dl lsr eag
CP001337_0 190 -------------FNLILRETRRLQRLIEDLELLSRVEAG 216

CP001337_1723: domain 1 of 1, from 472 to 542: score 64.6, E = 5.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a +sHELR+PL++++g+++lL +e++k ++l+e q
CP001337_1 472 QRRDFMAKVSHELRNPLHTLQGFLKLLINESNK----VGNLNERQ-- 512

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+ ++++++ l + i dl +l r+e g
CP001337_1 513 ----------TEALQEVENSVNTLKKRIVDLIELNRLERG 542

CP001337_2623: domain 1 of 1, from 226 to 290: score 63.0, E = 1.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HELRTPL+ I+g +e ++++++ e+++eq
CP001337_2 226 QRRQLTADIAHELRTPLSIIKGRLEGIQDGVY-------EADDEQ-- 263

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +l e+ l+rLindl l+ ++ag
CP001337_2 264 -------------IEALLAEVALLERLINDLHLLALADAG 290

CP001337_0933: domain 1 of 1, from 76 to 146: score 61.0, E = 5.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHEL PL +I+gy+elLle++ + +++ +q+
CP001337_0 76 AKSAFLAHVSHELHSPLMTILGYSELLLEDV-----QNGTAQTDQT- 116

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i++++++ll+Li+++ l+r+e g
CP001337_0 117 ----------ITWLQRIYDSGKQLLELIDNMIVLARLEVG 146

CP001337_1626: domain 1 of 1, from 495 to 564: score 60.8, E = 6.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla ++HELR PL+a+r ya+lLl+ + e ++ +
CP001337_1 495 AKDEFLAVAAHELRSPLAAVRSYADLLLR-----REQQREGDARD-- 534

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l ++ +++ ++lrL+++lLd sr++ag
CP001337_1 535 ----------LHGLTILTQQVSHMLRLVDNLLDVSRLDAG 564

CP001337_3171: domain 1 of 1, from 254 to 321: score 59.1, E = 1.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+a+++HE+RTPLta+r +e+Ll+ ++++++q++
CP001337_3 254 AQQRFIADAAHEMRTPLTALRSGLEVLLR---------GAQDDPQTA 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++++ ++ rl ++lLd +r e+g
CP001337_3 292 ----------FRLIQSMHCDVVRLCGVSEQLLDRARYESG 321

CP001337_3387: domain 1 of 1, from 249 to 315: score 59.0, E = 2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a++sHELRTP++a+ + + + +e ++s +
CP001337_3 249 RERQFTADASHELRTPVAAMEAIITVTRE---------RPRSVTE-- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y ++l+ +l +++rl++Li+dlL+l+r e+
CP001337_3 285 ---------YTQALDDLLVQTRRLRSLIDDLLQLTRSETR 315

CP001337_0473: domain 1 of 1, from 477 to 545: score 52.5, E = 1.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ + +l H+LR PLtaI+ + + +++l ++ s++q
CP001337_0 477 LREDYTGMLIHDLRAPLTAIMNGIMMVQRGLG------GPISPQQ-- 515

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+++++ ++ +l++in lLd+s++e+g
CP001337_0 516 ----------QEMLNIAYQGSQAMLEMINTLLDISKMEQG 545

CP001337_0590: domain 1 of 1, from 928 to 996: score 49.8, E = 8.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++ +l H+LR+PLt+I ++ e L el ++l e +
CP001337_0 928 LRDDLAHMLIHDLRQPLTTITLAFERLIHEL-------GDLFTERQ- 966

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++++ +++++rll+L+n +Ld+ rie+g
CP001337_0 967 ----------QQAVQIGQNSTKRLLNLVNTMLDIGRIESG 996

CP001337_3198: domain 1 of 1, from 122 to 186: score 49.8, E = 8.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++ +++HELRTPL++I gy+e l+++ e++e++
CP001337_3 122 RRVALIGDVAHELRTPLATIAGYVEGVLDGV-------VEADEDT-- 159

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+e++rl rL dl +lsr ea
CP001337_3 160 -------------WVLVLDEVNRLHRLAGDLQELSRVEAK 186

CP001337_2590: domain 1 of 1, from 429 to 495: score 49.1, E = 1.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ a+++HE+++PL a++ ++ lL++ ++l++e r
CP001337_2 429 AIGRLSASMAHEINNPLQALSNTIRLLRN---------PDLPSERR- 465

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl ++ e++ l + ++++Ldlsr +
CP001337_2 466 ----------DLYLAKAALELDGLIHRVQRILDLSRPNLE 495

CP001337_0541: domain 1 of 1, from 184 to 252: score 47.9, E = 2.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f ++sH+L+ PL +I+g+a ++ +l + + +
CP001337_0 184 TLEQFSYTVSHDLKSPLITIKGFAGYIQQDL-------RAGKLDRI- 222

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+ +a+r+ +L++dlL l++++ +
CP001337_0 223 ----------PDDLQRIIAAADRMHQLLEDLLHLAQAGRQ 252

CP001337_2146: domain 1 of 1, from 246 to 312: score 46.7, E = 6.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e+ a+++HE+++PL a r + l + +l + +++q
CP001337_2 246 AVGELSASVAHEINNPLYAARNSLYLVEQDL--------PPDAPQ-- 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l ++++e+ r+ r+i +++d+ r g
CP001337_2 283 ----------RTFLTIAQQELSRIARIITRMRDFYRPSRG 312

CP001337_2450: domain 1 of 1, from 431 to 496: score 46.2, E = 8.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a+++HE+++ L++++gya+l l+ + + e +
CP001337_2 431 AVGTFAASIAHEFNNLLSGMLGYAQLGLT----------DDDVEMK- 466

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+++l+ +r +++ lL+++r +
CP001337_2 467 ----------NEALKVVLDTCKRGRSITGSLLTFARRRDS 496

CP001337_0381: domain 1 of 1, from 422 to 488: score 45.9, E = 1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g +el+ + s+ +
CP001337_0 422 AIGQLAGGIAHDFNNILTVITGSVELAML---------EIDSDHAI- 458

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
le i+++a r +L+++lL+++r + g
CP001337_0 459 ----------YPELEAIRQSAARAGELVRQLLTFARRQPG 488

CP001337_3100: domain 1 of 1, from 124 to 192: score 42.3, E = 1.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ ++sH+L+ PL aI gy+++Ll + + l+++
CP001337_3 124 ELEEFTYAVSHDLKAPLRAIDGYSQILLH------FHIQRLDADG-- 162

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ i+ ++ ++ +Li+dlL+++ ie
CP001337_3 163 ----------QQCLHNIRTAVTQMYQLIDDLLTYTHIERK 192

CP001337_1096: domain 1 of 1, from 275 to 341: score 33.9, E = 2.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++++++H+L++ L I+g+ael + ++ ++
CP001337_1 275 AIGALTSGIAHDLNNLLVPIIGFAELGML---------QLSPSSEL- 311

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i+ ++ r +L +++L +sr +
CP001337_1 312 ----------YTDFDQIRAAGIRATALTRQILAFSRRQRL 341

CP001337_0827: domain 1 of 1, from 159 to 235: score 32.7, E = 5.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HE++TPL + ++ L e rl
CP001337_0 159 SLGQLVAGVAHEINTPLGYVANNLAFLAE----------------RL 189

peLR......ledpeyreyletilreaerllrLindlLdlsrieag<-*
p+LR ++++l + + ++++ + +er+ ++++ l+ ++r ++
CP001337_0 190 PALRaaptdeLGWRDVTDAIRESQTGIERIAAIVRALRVFARPDED 235

CP001337_0242: domain 1 of 1, from 491 to 557: score 31.8, E = 1.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ Lt+I+g+++l+l + + ++
CP001337_0 491 SLGLLAGGIAHDFNNLLTGIMGHTSLALL---------DLHPNHEL- 527

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l i+++a+r +L ++lL ++ ++
CP001337_0 528 ----------QPHLVAIDQAAQRAAELCSQLLAYAGRGQR 557

CP001337_3150: domain 1 of 1, from 484 to 550: score 30.8, E = 2.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++ +++H++++ Lt+I g+a L++ +++ +
CP001337_3 484 SLAIMAGGIAHDFNNLLTVIEGNANFLKN--------AITATHPV-- 520

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ +l ++++ L+++lL ++ ++
CP001337_3 521 ----------DQYLQNLLTATQQAGGLVEQLLRFAVADPL 550


Histogram of all scores:
score obs exp (one = represents 13 sequences)
----- --- ---
-14 11 0|=
-13 40 2|*===
-12 133 85|======*====
-11 330 442|========================== *
-10 541 820|========================================== *
-9 713 847|======================================================= *
-8 639 634|================================================*=
-7 493 399|==============================*=======
-6 301 230|=================*======
-5 208 126|=========*======
-4 109 67|=====*===
-3 71 35|==*===
-2 34 18|=*=
-1 24 9|*=
0 11 5|*
1 9 2|*
2 2 1|*
3 3 0|=
4 3 0|=
5 0 0|
6 0 0|
7 1 0|=
> 8 54 -|=====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 368.6743
P(chi-square) = 0

Total sequences searched: 3730

Whole sequence top hits:
tophits_s report:
Total hits: 46
Satisfying E cutoff: 46
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 46
Satisfying E cutoff: 46
Total memory: 39K


Acknowledgements:

This research is funded by:

Developed by: