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Thermotogae
Classification of phyla is from NCBI page
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132 projects found  

8 accessions found for Methylobacterium nodulans ORS 2060  

Data for CP001349  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001349.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001349_3637 CDS_3895761-3897974 94.1 4.5e-26 1
CP001349_5268 CDS_5578691-5581039 94.0 4.8e-26 1
CP001349_4400 CDS_4645907-4641855 92.8 1.1e-25 1
CP001349_4389 CDS_4633616-4630914 92.5 1.3e-25 1
CP001349_4998 CDS_5265706-5268615 92.0 1.8e-25 1
CP001349_0138 CDS_156242-159271 91.9 1.9e-25 1
CP001349_4630 CDS_4903632-4905173 91.8 2e-25 1
CP001349_5211 CDS_5507791-5509932 91.5 2.5e-25 1
CP001349_2916 CDS_3115014-3117923 87.2 4.1e-24 1
CP001349_0692 CDS_783298-785115 85.7 1.1e-23 1
CP001349_0998 CDS_1116435-1117751 81.5 1.7e-22 1
CP001349_6088 CDS_6452074-6457593 79.5 6.3e-22 2
CP001349_5769 CDS_6098863-6097283 78.8 1e-21 1
CP001349_1565 CDS_1716836-1718452 74.8 1.3e-20 1
CP001349_3114 CDS_3346308-3343366 69.8 3.5e-19 1
CP001349_1543 CDS_1688869-1691361 68.9 6.3e-19 1
CP001349_0190 CDS_217982-220705 67.2 1.9e-18 1
CP001349_5226 CDS_5525762-5527579 66.3 3.4e-18 1
CP001349_2666 CDS_2841220-2842650 64.2 1.4e-17 1
CP001349_0418 CDS_481767-478936 58.3 6.4e-16 1
CP001349_3491 CDS_3728092-3725258 58.3 6.4e-16 1
CP001349_4019 CDS_4257376-4258734 57.3 1.2e-15 1
CP001349_2454 CDS_2612865-2610436 57.0 1.5e-15 1
CP001349_2253 CDS_2429395-2430864 53.4 1.6e-14 1
CP001349_4354 CDS_4596045-4592527 53.3 1.6e-14 1
CP001349_2919 CDS_3119460-3121418 50.7 9e-14 1
CP001349_5786 CDS_6117641-6115410 50.6 9.4e-14 1
CP001349_5272 CDS_5587691-5586246 50.0 1.4e-13 1
CP001349_6255 CDS_6624597-6625700 49.7 1.7e-13 1
CP001349_5926 CDS_6274231-6272210 48.9 3e-13 1
CP001349_3069 CDS_3304695-3306686 48.3 4.4e-13 1
CP001349_1202 CDS_1330695-1328941 48.1 5.1e-13 1
CP001349_5967 CDS_6325301-6328300 45.8 2.3e-12 1
CP001349_2981 CDS_3195165-3196538 45.1 3.6e-12 1
CP001349_6259 CDS_6628836-6631097 44.9 4e-12 1
CP001349_3365 CDS_3624775-3626763 44.8 4.3e-12 1
CP001349_1622 CDS_1775045-1777150 44.7 4.6e-12 1
CP001349_5322 CDS_5643237-5640565 44.3 6e-12 1
CP001349_6331 CDS_6712425-6710443 42.9 1.4e-11 1
CP001349_2499 CDS_2676238-2673938 42.5 1.9e-11 1
CP001349_2049 CDS_2220656-2222230 41.3 4.1e-11 1
CP001349_1320 CDS_1462615-1461251 40.2 8.6e-11 1
CP001349_5619 CDS_5944594-5943443 39.0 1.8e-10 1
CP001349_0125 CDS_141449-139557 38.7 2.3e-10 1
CP001349_0750 CDS_841438-843882 38.5 2.6e-10 1
CP001349_6089 CDS_6457590-6459689 37.8 4.2e-10 1
CP001349_0057 CDS_64286-65671 37.7 4.4e-10 1
CP001349_5968 CDS_6328620-6330299 37.4 5.2e-10 1
CP001349_6960 CDS_7367437-7368855 36.7 8.3e-10 1
CP001349_5248 CDS_5552653-5554578 34.6 3.2e-09 1
CP001349_3597 CDS_3853384-3850949 32.6 1.2e-08 1
CP001349_1773 CDS_1937124-1935745 30.9 3.7e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001349_3637 1/1 246 311 .. 1 87 [] 94.1 4.5e-26
CP001349_5268 1/1 524 593 .. 1 87 [] 94.0 4.8e-26
CP001349_4400 1/1 858 924 .. 1 87 [] 92.8 1.1e-25
CP001349_4389 1/1 513 579 .. 1 87 [] 92.5 1.3e-25
CP001349_4998 1/1 737 806 .. 1 87 [] 92.0 1.8e-25
CP001349_0138 1/1 521 587 .. 1 87 [] 91.9 1.9e-25
CP001349_4630 1/1 261 330 .. 1 87 [] 91.8 2e-25
CP001349_5211 1/1 202 267 .. 1 87 [] 91.5 2.5e-25
CP001349_2916 1/1 586 652 .. 1 87 [] 87.2 4.1e-24
CP001349_0692 1/1 347 416 .. 1 87 [] 85.7 1.1e-23
CP001349_0998 1/1 192 259 .. 1 87 [] 81.5 1.7e-22
CP001349_6088 1/2 1158 1226 .. 1 87 [] 79.4 6.6e-22
CP001349_5769 1/1 298 364 .. 1 87 [] 78.8 1e-21
CP001349_1565 1/1 151 217 .. 1 87 [] 74.8 1.3e-20
CP001349_3114 1/1 483 548 .. 1 87 [] 69.8 3.5e-19
CP001349_1543 1/1 597 665 .. 1 87 [] 68.9 6.3e-19
CP001349_0190 1/1 672 740 .. 1 87 [] 67.2 1.9e-18
CP001349_5226 1/1 366 431 .. 1 87 [] 66.3 3.4e-18
CP001349_2666 1/1 242 309 .. 1 87 [] 64.2 1.4e-17
CP001349_0418 1/1 569 635 .. 1 87 [] 58.3 6.4e-16
CP001349_3491 1/1 574 640 .. 1 87 [] 58.3 6.4e-16
CP001349_4019 1/1 93 158 .. 1 87 [] 57.3 1.2e-15
CP001349_2454 1/1 586 654 .. 1 87 [] 57.0 1.5e-15
CP001349_2253 1/1 274 339 .. 1 87 [] 53.4 1.6e-14
CP001349_4354 1/1 808 872 .. 1 87 [] 53.3 1.6e-14
CP001349_2919 1/1 290 355 .. 1 87 [] 50.7 9e-14
CP001349_5786 1/1 364 431 .. 1 87 [] 50.6 9.4e-14
CP001349_5272 1/1 248 314 .. 1 87 [] 50.0 1.4e-13
CP001349_6255 1/1 128 192 .. 1 87 [] 49.7 1.7e-13
CP001349_5926 1/1 297 362 .. 1 87 [] 48.9 3e-13
CP001349_3069 1/1 438 505 .. 1 87 [] 48.3 4.4e-13
CP001349_1202 1/1 352 422 .. 1 87 [] 48.1 5.1e-13
CP001349_5967 1/1 625 693 .. 1 87 [] 45.8 2.3e-12
CP001349_2981 1/1 232 297 .. 1 87 [] 45.1 3.6e-12
CP001349_6259 1/1 509 580 .. 1 87 [] 44.9 4e-12
CP001349_3365 1/1 281 345 .. 1 87 [] 44.8 4.3e-12
CP001349_1622 1/1 335 402 .. 1 87 [] 44.7 4.6e-12
CP001349_5322 1/1 489 555 .. 1 87 [] 44.3 6e-12
CP001349_6331 1/1 284 350 .. 1 87 [] 42.9 1.4e-11
CP001349_2499 1/1 394 460 .. 1 87 [] 42.5 1.9e-11
CP001349_2049 1/1 293 364 .. 1 87 [] 41.3 4.1e-11
CP001349_1320 1/1 234 292 .. 1 87 [] 40.2 8.6e-11
CP001349_5619 1/1 139 207 .. 1 87 [] 39.0 1.8e-10
CP001349_0125 1/1 406 474 .. 1 87 [] 38.7 2.3e-10
CP001349_0750 1/1 444 512 .. 1 87 [] 38.5 2.6e-10
CP001349_6089 1/1 337 404 .. 1 87 [] 37.8 4.2e-10
CP001349_0057 1/1 240 297 .. 1 79 [. 37.7 4.4e-10
CP001349_5968 1/1 164 230 .. 1 87 [] 37.4 5.2e-10
CP001349_6960 1/1 269 327 .. 1 87 [] 36.7 8.3e-10
CP001349_5248 1/1 276 342 .. 1 87 [] 34.6 3.2e-09
CP001349_3597 1/1 466 532 .. 1 87 [] 32.6 1.2e-08
CP001349_1773 1/1 209 277 .. 1 87 [] 30.9 3.7e-08

Alignments of top-scoring domains:
CP001349_3637: domain 1 of 1, from 246 to 311: score 94.1, E = 4.5e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla++sHE+RTPL++I+gy+++Ll+ ++l +eq
CP001349_3 246 AKTDFLASMSHEIRTPLNGIIGYTDVLLD---------QDLKPEQ-- 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++le+i+ ++ ll +nd+Ld+s+ieag
CP001349_3 282 ----------RRLLERIQFAGAALLTVVNDILDFSKIEAG 311

CP001349_5268: domain 1 of 1, from 524 to 593: score 94.0, E = 4.8e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+kseflan+sHELRTPL+aI+g+ae++++e++ + l++e+
CP001349_5 524 SKSEFLANMSHELRTPLNAILGFAEVMQDEVF------GQLGSEK-- 562

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yrey + i++++++ll+ i+d+Ld+sriea
CP001349_5 563 ---------YREYCRDIRSSGHYLLSVIDDILDMSRIEAR 593

CP001349_4400: domain 1 of 1, from 858 to 924: score 92.8, E = 1.1e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla +sHE+RTPL++I+gy++lLle d++l+e q
CP001349_4 858 AKTDFLALMSHEIRTPLNGILGYTDLLLE--------DATLGEGQ-- 894

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ e+i++++ ll ++nd+Ld+s+ieag
CP001349_4 895 ----------RRQAERIQSAGAALLTIVNDILDFSKIEAG 924

CP001349_4389: domain 1 of 1, from 513 to 579: score 92.5, E = 1.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHE+RTPLt+++gya+lL + ++l +e+
CP001349_4 513 AKSEFLATMSHEIRTPLTGVLGYADLLTA--------QSDLAPEH-- 549

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++ +i++++e ll +++d+Ld+s+ieag
CP001349_4 550 ----------RRLVGRIRSAGEALLTIVDDVLDFSKIEAG 579

CP001349_4998: domain 1 of 1, from 737 to 806: score 92.0, E = 1.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+fla++sHE+RTPL+aI+g++e++ ee++ ++ + e
CP001349_4 737 QKSDFLATISHEIRTPLNAILGFTEVMMEEQF------GPIGNER-- 775

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr+yl+ i+ ++e+ +L+ dlLdl++ieag
CP001349_4 776 ---------YRDYLRDIRTSGEHVVSLVTDLLDLAKIEAG 806

CP001349_0138: domain 1 of 1, from 521 to 587: score 91.9, E = 1.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla++sHE+RTPL++++gy+elLl+ d++l+e q
CP001349_0 521 AKTDFLASMSHEIRTPLSSVIGYTELLLD--------DPDLTEGQ-- 557

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++i++++ ll ++d+Ld+s+ieag
CP001349_0 558 ----------RLQASRIRSAGSALLTVVDDILDFSKIEAG 587

CP001349_4630: domain 1 of 1, from 261 to 330: score 91.8, E = 2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL+aI+g++e++++e++ ++ ++
CP001349_4 261 AKSRFLATMSHELRTPLNAILGFSEVMKNEVF------GPHASPS-- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ey i++++ +ll+Lin++Ldlsrieag
CP001349_4 300 ---------YQEYSTDIHDSGMHLLNLINEILDLSRIEAG 330

CP001349_5211: domain 1 of 1, from 202 to 267: score 91.5, E = 2.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL++I+g+a+l l+ t+ls+eq
CP001349_5 202 AKSRFLATVSHEFRTPLNGILGMADLVLD---------TPLSPEQ-- 237

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y++ ++ ++e ll+Li+ +Ld+s+ieag
CP001349_5 238 ----------ETYIRAVKTSGEALLSLIDGILDFSKIEAG 267

CP001349_2916: domain 1 of 1, from 586 to 652: score 87.2, E = 4.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k eflan+sHELRTPLt+++g +lL dt ls+ q
CP001349_2 586 VKAEFLANMSHELRTPLTGMLGVHDLLAG--------DTSLSAAQ-- 622

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++ +++++++ll+++nd+Ld+s+ieag
CP001349_2 623 ----------RHLIGLAQEAGRSLLAIVNDILDFSKIEAG 652

CP001349_0692: domain 1 of 1, from 347 to 416: score 85.7, E = 1.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fla +sHELRTPL+aI+g++e+L +e+ +l+ e +
CP001349_0 347 VKSRFLAVVSHELRTPLNAIIGFSEMLSAEAG------LTLPVERQ- 386

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey +i++++++ll+ +n lLdl+ri++g
CP001349_0 387 ----------REYAVIIQSSGRHLLEVVNALLDLTRIQSG 416

CP001349_0998: domain 1 of 1, from 192 to 259: score 81.5, E = 1.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPL++++g++e+L+ ++++++ ++
CP001349_0 192 MRVDFVANASHELRTPLASLLGFIETLQG---------PARNDPAAR 229

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +++++a r+ rLi+dlL lsrie
CP001349_0 230 ----------DRFLAIMREQALRMTRLIDDLLSLSRIELR 259

CP001349_6088: domain 1 of 2, from 1158 to 1226: score 79.4, E = 6.6e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++I+ + + L e d++lse q
CP001349_6 1158 YKSEFLANMSHELRTPLNSILILGQQLSE------NPDGNLSERQ-- 1196

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ +ti+ ++ ll+Li+d+Ldls+ie+g
CP001349_6 1197 ----------VEFARTIHGAGTDLLNLISDILDLSKIESG 1226

CP001349_5769: domain 1 of 1, from 298 to 364: score 78.8, E = 1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTPLt+I+g ++l+ + ++ ++e
CP001349_5 298 SRRRFFADVSHELRTPLTVILGECDLAAR---------SPDTPES-- 333

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r + ti++ a rl r + d+L ++r e+g
CP001349_5 334 ---------FRPVIATIRKRALRLHRRVGDMLRIARSESG 364

CP001349_1565: domain 1 of 1, from 151 to 217: score 74.8, E = 1.3e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla +sHE+R PL++I+gy++lLl ++++++e+
CP001349_1 151 AKSAFLARVSHEIRSPLNSILGYTDLLLG--------EANRTAEE-- 187

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l +i+ ++ +ll+ ++d+ d+sri ag
CP001349_1 188 ----------RRKLTIIQVSGSSLLAVVDDIVDFSRITAG 217

CP001349_3114: domain 1 of 1, from 483 to 548: score 69.8, E = 3.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla +sHE+RTPLt+++g+ +lL +el +eq
CP001349_3 483 AKTEFLAVMSHEIRTPLTGMIGMMDLLSS---------AELKPEQ-- 518

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ ++r++ llr ++ +L + r+e+
CP001349_3 519 ----------ARWLDGARRSSAALLRVLDSILSYGRAETS 548

CP001349_1543: domain 1 of 1, from 597 to 665: score 68.9, E = 6.3e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ef+ ++s ELR PLt I+g++elL +e ++l+ q
CP001349_1 597 LRDEFVHHVSYELRSPLTNIIGFTELLGDET------VGALNTRQ-- 635

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey + i r++ ll +ind+Ldl+ i+ag
CP001349_1 636 ----------REYADHIMRSSAALLVIINDILDLASIDAG 665

CP001349_0190: domain 1 of 1, from 672 to 740: score 67.2, E = 1.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +l ++sH+LRTPL++++g+a +L++ d++l +e +
CP001349_0 672 LRQALLTSMSHDLRTPLASVLGAATTLRD-------LDEALAPEAK- 710

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l ti+ e+erl+r i +lLd++r+eag
CP001349_0 711 ----------RDLLATIIAESERLNRFIANLLDMTRLEAG 740

CP001349_5226: domain 1 of 1, from 366 to 431: score 66.3, E = 3.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a++sHEL++PLt++r ++e+L ++++e r
CP001349_5 366 AIENFAADVSHELKNPLTSLRSAVETLPL----------AKTDESR- 401

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++i+++++rl+rLi+d+ d sr++a+
CP001349_5 402 ----------GRLMQVIQHDVKRLDRLISDIADASRLDAE 431

CP001349_2666: domain 1 of 1, from 242 to 309: score 64.2, E = 1.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+a++sH++RTPL+++r++++l+++++ ++s+e
CP001349_2 242 AMRRFTADASHQMRTPLAVLRTHLDLARRYG-------VAASSEG-- 279

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+ i+ +aerl++L+++l l+r+++
CP001349_2 280 ----------RAALDDIEGAAERLEHLLSQLIALARADEA 309

CP001349_0418: domain 1 of 1, from 569 to 635: score 58.3, E = 6.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt Ir ++ L++ ++l+ee r
CP001349_0 569 AVGQLTGGVAHDFNNLLTIIRSSVDFLRR---------PDLPEERR- 605

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+ + + ++r +L +lL ++r +a
CP001349_0 606 ----------RRYLDAVSDTVDRAAKLTGQLLAFARRQAL 635

CP001349_3491: domain 1 of 1, from 574 to 640: score 58.3, E = 6.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt Ir ++ L++ ++l+ee r
CP001349_3 574 AVGQLTGGVAHDFNNLLTIIRSSVDFLRR---------PDLPEERR- 610

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+ + + ++r +L +lL ++r +a
CP001349_3 611 ----------RRYLDAVSDTVDRAAKLTGQLLAFARRQAL 640

CP001349_4019: domain 1 of 1, from 93 to 158: score 57.3, E = 1.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fl ++sH+L +PL+a r+ +++L + + ++e
CP001349_4 93 SKTRFLTAASHDLLQPLNAARLSLSALGD---------MPVGAEA-- 128

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ ++r ++ +++Li lLd+s+++ag
CP001349_4 129 ----------QAIVGQVERGLQTIEDLIKTLLDISKLDAG 158

CP001349_2454: domain 1 of 1, from 586 to 654: score 57.0, E = 1.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL a++++a++Ll+++ +e+ e+
CP001349_2 586 ELDAFSYTVSHDLRAPLRAVQTLASILLDDF-------GERLGETG- 624

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y e+i +a+r+++L++ lL++sr+
CP001349_2 625 ----------RQYAERIVGAAQRMDDLVQGLLQYSRLART 654

CP001349_2253: domain 1 of 1, from 274 to 339: score 53.4, E = 1.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++++++HE+R+PL+a+r+ ae +l+ + +
CP001349_2 274 AVGRMASGVAHEIRNPLAAMRLKAENALA---------SRDPIRS-- 309

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l ++l++++r++rL++dlL l + + +
CP001349_2 310 ----------RAALTVVLEQIDRMDRLLRDLLSLIQPRPP 339

CP001349_4354: domain 1 of 1, from 808 to 872: score 53.3, E = 1.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH++ +PL+a r+ya +L e ++s +
CP001349_4 808 SKTRFLAAASHDILQPLNAARLYAAALVE---------RDRSGDP-- 843

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e ++ +++ ++++ lLd+sr+++g
CP001349_4 844 -----------SLAENVDASLDAVEEILTTLLDISRLDTG 872

CP001349_2919: domain 1 of 1, from 290 to 355: score 50.7, E = 9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ +la+++HEL++PL+ +++ a lL++++ ++l+ + r
CP001349_2 290 AMGSLLAGVAHELNNPLAILIAQATLLRDKA-------PTLDVQRR- 328

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+i+ +aer r++ + ++r e +
CP001349_2 329 -------------AERIHAAAERSGRIVKSFVAMARQEPP 355

CP001349_5786: domain 1 of 1, from 364 to 431: score 50.6, E = 9.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ Lt+++g +e+L++++ ++ ++ q
CP001349_5 364 AVGRLTGGLAHDFNNLLTVVLGSLEILQRRM-------GPVDARQ-- 401

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ ++ a+r +L ++lL ++r +
CP001349_5 402 ----------QRLIDNAIGGARRAAALTQRLLAFARRQPL 431

CP001349_5272: domain 1 of 1, from 248 to 314: score 50.0, E = 1.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e n++H+L+TPLt +r a+ +l+ t ++e++
CP001349_5 248 GLREVSDNIAHDLKTPLTRLRNKADEALR---------TGHDAETL- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +le ++e++ l r n lL ++r+eag
CP001349_5 285 ----------RAALEANIEESDNLIRVFNALLMIARLEAG 314

CP001349_6255: domain 1 of 1, from 128 to 192: score 49.7, E = 1.7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + a+l+HE+++PL++Irg+a+lL+ + e++
CP001349_6 128 SMVALGAMLAHEIKNPLAGIRGAAQLLEQ----------SAAEDD-- 162

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++ i +ea+r+ rL++++ + +
CP001349_6 163 ----------RLLTRLICDEADRIVRLVERMELFGDERPV 192

CP001349_5926: domain 1 of 1, from 297 to 362: score 48.9, E = 3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g++e+L++ + + + q
CP001349_5 297 AVGQLTGGIAHDFNNLLTVILGNLEMLEA---------QIREPRQ-- 332

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++ +++ ae+ +L ++lL + r +
CP001349_5 333 ----------LELVKEARETAEHGAQLTERLLAFGRRQPL 362

CP001349_3069: domain 1 of 1, from 438 to 505: score 48.3, E = 4.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +e +a+++HE+++P+++I+g++e+++e +l++ +
CP001349_3 438 SIGEITAGVAHEINNPIAVIQGNLEVARE----------ALGSAAN- 473

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++ ++ i+++++r + ++ +lL+++r e+
CP001349_3 474 --------EVKTEFDLIDQQVHRVNMIVTRLLQFARPEEY 505

CP001349_1202: domain 1 of 1, from 352 to 422: score 48.1, E = 5.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+e l +++H+L++PL++I+g ae+L + l g +++ e +
CP001349_1 352 LKTEILGTVAHDLKNPLAVILGRAEMLGD-----LIGTLPQPVEAM- 392

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + i+++a+rl +i+ l + +a
CP001349_1 393 ----------RAQVGHIRDSARRLTGMIESLIADAMNDAL 422

CP001349_5967: domain 1 of 1, from 625 to 693: score 45.8, E = 2.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ Lt+I+g +elL++++ + l++ +
CP001349_5 625 AVGQLTGGLAHDFNNLLTGISGSLELLQTRMA-----QGRLTDLD-- 664

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y++ ++ +++r +L +lL +sr ++
CP001349_5 665 -----------RYINAAQGASKRAAALTHRLLAFSRRQTL 693

CP001349_2981: domain 1 of 1, from 232 to 297: score 45.1, E = 3.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+an +HELRTP++a ++ ++ L + el +++r
CP001349_2 232 AERSFTANSAHELRTPIAAALAQTQRLCA----------ELQDQER- 267

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e + i+ +++rl+rL + lL+l+++e g
CP001349_2 268 ----------LERARAIEGALRRLSRLSEKLLQLAKAEGG 297

CP001349_6259: domain 1 of 1, from 509 to 580: score 44.9, E = 4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ ++HE+++PLt I++ ae +++++ g +++++
CP001349_6 509 AWADVARRIAHEIKNPLTPIQLSAERIRRKY-----GKVITTDKEV- 549

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + ti r+++ + r+++++ ++r+ +
CP001349_6 550 ---------FEQCTATIVRQVDDIKRMVDEFSSFARMPKP 580

CP001349_3365: domain 1 of 1, from 281 to 345: score 44.8, E = 4.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ + a+++H++++ Lt+++g+++lL++ ++ee r
CP001349_3 281 ALGGLSAGIAHDFNNLLTVVLGNLDLLRR-----------APEERR- 315

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ + +++e+ ++L ++lL + r ++
CP001349_3 316 ----------ARLIDNAMQAVEQGRKLTQQLLAFGRSQTL 345

CP001349_1622: domain 1 of 1, from 335 to 402: score 44.7, E = 4.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L++I g +e+L+++l + + +
CP001349_1 335 AVGQLTGGIAHDFNNLLAVITGSLEVLQRRL-------ARGDTDV-- 372

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +l+ a+r +L +lL ++r +
CP001349_1 373 ----------GRFIDGALDGADRAAKLTHRLLAFARQQPL 402

CP001349_5322: domain 1 of 1, from 489 to 555: score 44.3, E = 6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ L aI+gy++lLl+ ++++ + +
CP001349_5 489 MVGQLAGGIAHDFNNVLQAIIGYSDLLLA---------SHRPVDPA- 525

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i++ a+r +L+++lL +sr ++
CP001349_5 526 ----------FQDIMQIKQNANRAASLVRQLLAFSRRQTL 555

CP001349_6331: domain 1 of 1, from 284 to 350: score 42.9, E = 1.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L++++g+++l+++ l+++ +l
CP001349_6 284 AIGQLTGGVAHDFNNLLAVVLGNLSLARK----------RLPPDRKL 320

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++e +++aer L ++L ++r ++
CP001349_6 321 ----------KQLIENSIQAAERGATLTKRMLAFARRQEL 350

CP001349_2499: domain 1 of 1, from 394 to 460: score 42.5, E = 1.9e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L+++++ +++L++ l+++ +l
CP001349_2 394 AVGQLTGGVAHDFNNLLSVVLASLDVLKK----------RLPDDPKL 430

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+ ++++++r +L +++L ++r ++
CP001349_2 431 ----------RRLLDNAEQATQRGAALTQRMLAFARRQHL 460

CP001349_2049: domain 1 of 1, from 293 to 364: score 41.3, E = 4.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HE+++PLtaI y++ +++ l+++ +e +l
CP001349_2 293 ALGEMASTLAHEINQPLTAIASYLKGCRR-----LLQRMQGPEVPLL 334

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ + ++a r + i+ l+++ ++
CP001349_2 335 ----------ADAVGQAADQALRAGQVIRHLREFVARGES 364

CP001349_1320: domain 1 of 1, from 234 to 292: score 40.2, E = 8.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +la++sH+LRTP+t +r+ ae L++
CP001349_1 234 DRTHMLAAISHDLRTPITRLRLRAEFLED------------------ 262

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + lr+++++++L++ L + r +
CP001349_1 263 ----------EALRAQFLRDLDQMNALVEAALSFVRDGRT 292

CP001349_5619: domain 1 of 1, from 139 to 207: score 39.0, E = 1.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++HE+++ L + gy++ L+++l +e ++ +
CP001349_5 139 ALGQLTNGVAHEFNNLLQILVGYVDGLKRRL-------SEHPDAFV- 177

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l ++ ++aer + L + lL +sr +
CP001349_5 178 ----------QRALTRATDAAERASTLTRHLLAFSRKHRP 207

CP001349_0125: domain 1 of 1, from 406 to 474: score 38.7, E = 2.3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+a+++HE+++PL+aIr ya+ + +++ + e+
CP001349_0 406 ALGQFAASMAHEINQPLAAIRSYADNAAI------LIRRGRIEDA-- 444

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e ++ i r +er+ L ++l ++r +g
CP001349_0 445 ----------SENFSAIGRLTERIAGLTRQLKGFARRASG 474

CP001349_0750: domain 1 of 1, from 444 to 512: score 38.5, E = 2.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g ++l+++ r+
CP001349_0 444 AVGQLTGGIAHDFNNLLTGIVGSLDLMQT----------------RI 474

peLR...ledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+R+++l +y + +a+r +L +lL +sr +
CP001349_0 475 GEGRtenL-----TRYAGLAMASAQRAAALTHRLLAFSRRQPL 512

CP001349_6089: domain 1 of 1, from 337 to 404: score 37.8, E = 4.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++H++++ L a++g +elL ++l +++++
CP001349_6 337 TIGQLTGGVAHDFNNLLMAVLGSLELLGKRL-------DPKDDLA-- 374

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +++ a+r +L ++lL ++r ++
CP001349_6 375 ----------LRLVDNAIQGARRGAALTQRLLAFARRQEL 404

CP001349_0057: domain 1 of 1, from 240 to 297: score 37.7, E = 4.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a+++H++RTPL+a+ + ++lL + e +e r
CP001349_0 240 IMRRFIADAAHQIRTPLAALGAQVDLLSA----------EGDEARR- 275

peLRledpeyreyletilreaerllrLindlL<-*
re + ++++ + l rL n+lL
CP001349_0 276 ----------REQVIRVQERTAELGRLTNQLL 297

CP001349_5968: domain 1 of 1, from 164 to 230: score 37.4, E = 5.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++a+l+H++++ L++I g +e L + ++
CP001349_5 164 AIGQLTAGLAHDFNNLLHVITGSLERLAA---------KRHDDRA-- 199

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++y + +aer +L +lL ++r +
CP001349_5 200 ---------FERYMAAATAAAERGAKLTHQLLAFARRGRL 230

CP001349_6960: domain 1 of 1, from 269 to 327: score 36.7, E = 8.3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l ++sH+LRT Lt r+ + l+
CP001349_6 269 QRTTMLNGVSHDLRTILTRFRLSLALIGQ------------------ 297

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + r++e ++r+++ L ++r ++g
CP001349_6 298 ----------GPEIDDLTRDVEEMSRMLEAYLAFARGDSG 327

CP001349_5248: domain 1 of 1, from 276 to 342: score 34.6, E = 3.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++ +++H++++ LtaI+g +el+l +++ +
CP001349_5 276 ALGTLAGGVAHDFNNLLTAIMGSLELALP---------KVAGDARL- 312

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++a+r +L +lL +sr ++
CP001349_5 313 ----------SRLMTNAAQAAQRGAALTKRLLSFSRQREL 342

CP001349_3597: domain 1 of 1, from 466 to 532: score 32.6, E = 1.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ + ++ H+++ Lt+I++ + +L++ ++ e ++
CP001349_3 466 VLRRVTDGIVHDINDILTVILASLGTLKR---------RNQLEGEL- 502

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++t+l a r ++L + +L++ r e +
CP001349_3 503 ----------ARFVDTALAGALRGRALTRSMLTFVRSEDE 532

CP001349_1773: domain 1 of 1, from 209 to 277: score 30.9, E = 3.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+++HEL TPL++I + L + +l++ +
CP001349_1 209 QLDGLAAAAAHELGTPLATITVVVNELDR----------ALGPTAT- 244

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p ++e l+ +++++er++ +++ l l ++g
CP001349_1 245 -------PAVAEDLKLLREQVERCRGILSKLTSLDDDQSG 277


Histogram of all scores:
score obs exp (one = represents 24 sequences)
----- --- ---
-15 4 0|=
-14 35 0|==
-13 121 5|*=====
-12 387 168|======*==========
-11 793 871|================================== *
-10 1210 1617|=================================================== *
-9 1410 1670|==========================================================*
-8 1163 1250|================================================= *
-7 876 788|================================*====
-6 579 453|==================*======
-5 334 248|==========*===
-4 170 133|=====*==
-3 95 70|==*=
-2 47 36|=*
-1 30 19|*=
0 17 10|*
1 11 5|*
2 9 2|*
3 1 1|*
4 0 0|
5 4 0|=
> 6 60 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 2969.9443
P(chi-square) = 0

Total sequences searched: 7356

Whole sequence top hits:
tophits_s report:
Total hits: 52
Satisfying E cutoff: 52
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 52
Satisfying E cutoff: 52
Total memory: 42K


Acknowledgements:

This research is funded by:

Developed by: