Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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14 projects found  

1 accessions found for Chloroflexus sp. Y-400-fl  

Data for CP001364  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001364.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001364_3235 CDS_4115631-4118489 97.4 2.9e-27 1
CP001364_3790 CDS_4817399-4819063 93.7 3.4e-26 1
CP001364_0485 CDS_588574-591210 93.2 4.7e-26 1
CP001364_3214 CDS_4092500-4090320 90.8 2.2e-25 1
CP001364_2210 CDS_2862580-2859950 90.3 3e-25 1
CP001364_0196 CDS_241587-243875 89.6 4.7e-25 1
CP001364_0420 CDS_510465-506422 88.8 8.4e-25 1
CP001364_1333 CDS_1735306-1736919 88.4 1e-24 1
CP001364_4012 CDS_5072382-5076011 88.3 1.1e-24 1
CP001364_0853 CDS_1103302-1101503 84.3 1.5e-23 1
CP001364_2176 CDS_2817135-2818706 84.1 1.8e-23 1
CP001364_3287 CDS_4180587-4183334 82.7 4.5e-23 1
CP001364_2801 CDS_3532713-3541061 81.6 9.2e-23 1
CP001364_3663 CDS_4664555-4665511 81.5 9.6e-23 1
CP001364_4108 CDS_5207288-5205822 80.7 1.6e-22 1
CP001364_3723 CDS_4733816-4735324 80.5 1.8e-22 1
CP001364_2917 CDS_3681258-3684020 79.6 3.2e-22 1
CP001364_2983 CDS_3761025-3763898 78.4 7.2e-22 1
CP001364_1877 CDS_2422065-2424818 78.4 7.4e-22 1
CP001364_1479 CDS_1907490-1909745 77.0 1.8e-21 1
CP001364_2209 CDS_2859953-2858763 74.5 9.4e-21 1
CP001364_3356 CDS_4270431-4267867 73.6 1.6e-20 1
CP001364_1359 CDS_1768213-1766774 71.0 9.3e-20 1
CP001364_4073 CDS_5155398-5156756 68.2 5.5e-19 1
CP001364_3578 CDS_4554499-4555686 67.6 8.3e-19 1
CP001364_3034 CDS_3825709-3826986 66.6 1.6e-18 1
CP001364_0927 CDS_1209463-1208063 62.5 2.3e-17 1
CP001364_2571 CDS_3263428-3261977 61.8 3.7e-17 1
CP001364_1257 CDS_1641440-1643668 58.0 4.3e-16 1
CP001364_2568 CDS_3260009-3258870 56.2 1.4e-15 1
CP001364_0553 CDS_670460-671530 55.7 1.9e-15 1
CP001364_2992 CDS_3773341-3776865 49.0 1.6e-13 1
CP001364_1939 CDS_2514908-2512752 47.1 5.4e-13 1
CP001364_1023 CDS_1331554-1333002 47.0 5.8e-13 1
CP001364_3527 CDS_4486830-4483699 46.7 6.9e-13 2
CP001364_1883 CDS_2437561-2438820 46.6 7.4e-13 1
CP001364_1537 CDS_1989680-1992070 46.2 9.4e-13 1
CP001364_3734 CDS_4750488-4748371 44.9 2.3e-12 1
CP001364_2168 CDS_2811570-2809570 44.0 4e-12 1
CP001364_1220 CDS_1583914-1586154 39.7 6.8e-11 1
CP001364_2245 CDS_2905199-2902104 35.4 1.1e-09 1
CP001364_3694 CDS_4693679-4696297 31.3 1.6e-08 1
CP001364_0245 CDS_301672-299744 29.2 6.4e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001364_3235 1/1 488 554 .. 1 87 [] 97.4 2.9e-27
CP001364_3790 1/1 307 373 .. 1 87 [] 93.7 3.4e-26
CP001364_0485 1/1 633 701 .. 1 87 [] 93.2 4.7e-26
CP001364_3214 1/1 482 549 .. 1 87 [] 90.8 2.2e-25
CP001364_2210 1/1 628 696 .. 1 87 [] 90.3 3e-25
CP001364_0196 1/1 525 593 .. 1 87 [] 89.6 4.7e-25
CP001364_0420 1/1 848 916 .. 1 87 [] 88.8 8.4e-25
CP001364_1333 1/1 156 224 .. 1 87 [] 88.4 1e-24
CP001364_4012 1/1 716 784 .. 1 87 [] 88.3 1.1e-24
CP001364_0853 1/1 360 428 .. 1 87 [] 84.3 1.5e-23
CP001364_2176 1/1 292 360 .. 1 87 [] 84.1 1.8e-23
CP001364_3287 1/1 417 482 .. 1 87 [] 82.7 4.5e-23
CP001364_2801 1/1 2544 2612 .. 1 87 [] 81.6 9.2e-23
CP001364_3663 1/1 65 135 .. 1 87 [] 81.5 9.6e-23
CP001364_4108 1/1 252 319 .. 1 87 [] 80.7 1.6e-22
CP001364_3723 1/1 279 344 .. 1 87 [] 80.5 1.8e-22
CP001364_2917 1/1 688 756 .. 1 87 [] 79.6 3.2e-22
CP001364_2983 1/1 474 549 .. 1 87 [] 78.4 7.2e-22
CP001364_1877 1/1 395 463 .. 1 87 [] 78.4 7.4e-22
CP001364_1479 1/1 507 575 .. 1 87 [] 77.0 1.8e-21
CP001364_2209 1/1 169 237 .. 1 87 [] 74.5 9.4e-21
CP001364_3356 1/1 613 681 .. 1 87 [] 73.6 1.6e-20
CP001364_1359 1/1 244 316 .. 1 87 [] 71.0 9.3e-20
CP001364_4073 1/1 223 287 .. 1 87 [] 68.2 5.5e-19
CP001364_3578 1/1 153 217 .. 1 87 [] 67.6 8.3e-19
CP001364_3034 1/1 185 250 .. 1 87 [] 66.6 1.6e-18
CP001364_0927 1/1 226 290 .. 1 87 [] 62.5 2.3e-17
CP001364_2571 1/1 254 321 .. 1 87 [] 61.8 3.7e-17
CP001364_1257 1/1 495 564 .. 1 87 [] 58.0 4.3e-16
CP001364_2568 1/1 153 217 .. 1 87 [] 56.2 1.4e-15
CP001364_0553 1/1 126 194 .. 1 87 [] 55.7 1.9e-15
CP001364_2992 1/1 923 991 .. 1 87 [] 49.0 1.6e-13
CP001364_1939 1/1 472 542 .. 1 87 [] 47.1 5.4e-13
CP001364_1023 1/1 258 324 .. 1 87 [] 47.0 5.8e-13
CP001364_1883 1/1 195 261 .. 1 87 [] 46.6 7.4e-13
CP001364_1537 1/1 431 496 .. 1 87 [] 46.2 9.4e-13
CP001364_3527 1/2 670 736 .. 1 87 [] 46.1 1e-12
CP001364_3734 1/1 471 539 .. 1 87 [] 44.9 2.3e-12
CP001364_2168 1/1 429 495 .. 1 87 [] 44.0 4e-12
CP001364_1220 1/1 274 340 .. 1 87 [] 39.7 6.8e-11
CP001364_2245 1/1 671 737 .. 1 87 [] 35.4 1.1e-09
CP001364_3694 1/1 492 558 .. 1 87 [] 31.3 1.6e-08
CP001364_0245 1/1 275 341 .. 1 87 [] 29.2 6.4e-08

Alignments of top-scoring domains:
CP001364_3235: domain 1 of 1, from 488 to 554: score 97.4, E = 2.9e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHELRTPL+a++g+a+l+ + d++l++ q
CP001364_3 488 AKSAFLANVSHELRTPLHAVLGFAQLMSR--------DDNLTATQ-- 524

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl +i r +e+ll+Lin++Ldl++ie+g
CP001364_3 525 ----------HEYLAIINRNSEHLLHLINEVLDLAKIESG 554

CP001364_3790: domain 1 of 1, from 307 to 373: score 93.7, E = 3.4e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHELRTPL+aI+gya+lL + + se++
CP001364_3 307 AKSAFLATMSHELRTPLNAILGYAQLLHL--------SNAVSEPH-- 343

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yle+il+++++ll Li+d+Ld++rie+g
CP001364_3 344 ----------ADYLERILSSGRHLLTLISDVLDFARIEQG 373

CP001364_0485: domain 1 of 1, from 633 to 701: score 93.2, E = 4.7e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef+ ++sHELRTP+taI+g+++lL + +g + l++ q
CP001364_0 633 MKNEFIGTMSHELRTPMTAIKGFTQLLAM------GGLGQLNDTQ-- 671

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ti++ +er+ +Lind+L++++ie+g
CP001364_0 672 ----------REFVNTIYSNTERMINLINDVLEITKIESG 701

CP001364_3214: domain 1 of 1, from 482 to 549: score 90.8, E = 2.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef+ +sHELRTPLt+I+gy+e+Ll+ +++l+ e +
CP001364_3 482 LKDEFIGIVSHELRTPLTSILGYTEILLN--------RQDLDYESQ- 519

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l+t+ +eaerl +++ dlLd sr+eag
CP001364_3 520 ----------REFLQTVSNEAERLFKMVKDLLDVSRLEAG 549

CP001364_2210: domain 1 of 1, from 628 to 696: score 90.3, E = 3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+fla++sHELRTPL+aI+g++ +Ll++ d ++l++ q
CP001364_2 628 RKSDFLASISHELRTPLNAIIGFSTVLLDDTD------QPLTPTQ-- 666

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re +++i r ++ ll+Lin+lLdl+rieag
CP001364_2 667 ----------REDIQSINRNGRFLLHLINELLDLARIEAG 696

CP001364_0196: domain 1 of 1, from 525 to 593: score 89.6, E = 4.7e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fla++sHELRTPLt+I+gy+++L++++ +els+e
CP001364_0 525 LKTGFLATVSHELRTPLTTIIGYTDMLRRGV------LGELSPEV-- 563

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+ +++++ l rLi+d+L++sr+eag
CP001364_0 564 ----------QETLHYMRQASLNLMRLISDILEFSRMEAG 593

CP001364_0420: domain 1 of 1, from 848 to 916: score 88.8, E = 8.4e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+eflan+sHELRTPL++I++++e Lleel+ ++l ++q
CP001364_0 848 TKDEFLANMSHELRTPLNSILALSESLLEELY------GPLRDQQ-- 886

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ i+ ++++ll+Lind+Ldl++iea+
CP001364_0 887 ----------QKAIRAIEASGRHLLALINDVLDLAKIEAN 916

CP001364_1333: domain 1 of 1, from 156 to 224: score 88.4, E = 1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla++sHE+RTPLtaI+g+++lL+++l ++ls+eq
CP001364_1 156 IKDEFLASMSHEIRTPLTAILGMVDLLRAQL------VGPLSDEQ-- 194

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i++ +++ll+Lind Ld+++ eag
CP001364_1 195 ----------MGAIDGIKKGSQHLLSLINDYLDIAKVEAG 224

CP001364_4012: domain 1 of 1, from 716 to 784: score 88.3, E = 1.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef+a +sHELRTPLt+Irg + lL ++ +el++
CP001364_4 716 MKNEFVAVVSHELRTPLTSIRGSLGLLAGGV------VGELPPRA-- 754

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++++l+ +erl rLind+Ld+++ie+g
CP001364_4 755 ----------ASMIDIALKNSERLIRLINDILDIEKIESG 784

CP001364_0853: domain 1 of 1, from 360 to 428: score 84.3, E = 1.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fl+++sHELRTPLtaI+gy+e L+e+l +++ +
CP001364_0 360 AKSAFLSMMSHELRTPLTAILGYSEFLREDL-------LNRDLHSL- 398

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i+ ++++ll Lind+Ld++r+ea+
CP001364_0 399 ----------TSDLDRIITAGRHLLTLINDILDYARLEAN 428

CP001364_2176: domain 1 of 1, from 292 to 360: score 84.1, E = 1.8e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f++ +sHELRTP++ I+g+ae++l+ d+ + eq
CP001364_2 292 RQNTFISVISHELRTPVSIIKGFAETMLR-------PDGQFTVEQ-- 329

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l++i +ea+rl r+i+dlLd sri ag
CP001364_2 330 ---------YREALQVISEEADRLARQIQDLLDVSRIAAG 360

CP001364_3287: domain 1 of 1, from 417 to 482: score 82.7, E = 4.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ fl+++sHE+RTPL+a+++ aelLl+ ++l++ q
CP001364_3 417 AQAAFLSAISHEMRTPLNAVIASAELLLT---------DTLTPSQ-- 452

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++eti+ +e ll+L+n++Ldls+ieag
CP001364_3 453 ----------RSLIETIRIGGEALLALVNNVLDLSKIEAG 482

CP001364_2801: domain 1 of 1, from 2544 to 2612: score 81.6, E = 9.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f++++sHELRTPLtaI+gy+++Ll + +l+++q+
CP001364_2 2544 EKRQFISDVSHELRTPLTAIKGYVDVLLL------TASLNLTPDQI- 2583

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl +i++ ++rl++Li+d+L++sr ++
CP001364_2 2584 -----------NYLTIIKNNTNRLRALIEDILEFSRPDSK 2612

CP001364_3663: domain 1 of 1, from 65 to 135: score 81.5, E = 9.6e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fl n+sHELRTPL++I+gy+elL e + l+e +
CP001364_3 65 TKSAFLTNISHELRTPLNTIIGYSELLHE---------DVLDERLAV 102

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e re le+i+ +a++ll+Lind+ +l+r+eag
CP001364_3 103 DEV-------RERLERIQAAARQLLSLINDIIELARLEAG 135

CP001364_4108: domain 1 of 1, from 252 to 319: score 80.7, E = 1.6e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHELRTPLta++g++e+L + ++++++ +l
CP001364_4 252 TQQRFVADVSHELRTPLTAMQGNLEILDR---------GTCPDPALL 289

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e + ++re+ rl r++ndlL l++ e+
CP001364_4 290 ----------KEVIGDMRRETARLIRMVNDLLLLAQSETH 319

CP001364_3723: domain 1 of 1, from 279 to 344: score 80.5, E = 1.8e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELR PLt Ir+ ae++l+ ++ +++q
CP001364_3 279 RQTRFIASASHELRAPLTLIRASAEVALR---------HADDPDQ-- 314

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l+ +l+e+++++rL++dlL+lsr+++g
CP001364_3 315 ----------RELLSDVLSESDHMRRLVDDLLTLSRLDSG 344

CP001364_2917: domain 1 of 1, from 688 to 756: score 79.6, E = 3.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++f+a++sHELRTPLt +rgy+el+l+++ ++l++eq
CP001364_2 688 AKTDFIATISHELRTPLTIVRGYLELILRQSA------SALDAEQ-- 726

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++le ++++a ++ +L+n+ + ++ag
CP001364_2 727 ----------RDMLEEVRQSAIQMTHLVNNAIMVANLDAG 756

CP001364_2983: domain 1 of 1, from 474 to 549: score 78.4, E = 7.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
+k+ef++++sHELRTPL++ +g+++lLl ++++ +++ ++s+ +
CP001364_2 474 MKNEFVSMVSHELRTPLASTQGALQLLLGDSERGkSGLIRDMSSVE- 519

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+++l ++rllrL+nd+Ld+++ie g
CP001364_2 520 -----------RDLLQRALTNTNRLLRLVNDVLDIAKIERG 549

CP001364_1877: domain 1 of 1, from 395 to 463: score 78.4, E = 7.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHELRTPLtaI+gy++lL+ + ++ +++
CP001364_1 395 AKSTFLATMSHELRTPLTAIIGYSQLLEQLV-------SKGIYDTV- 433

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +i+ ++ +ll+Lind+Ld+s+ieag
CP001364_1 434 ----------AHDVGRIRAAGTHLLALINDILDISKIEAG 463

CP001364_1479: domain 1 of 1, from 507 to 575: score 77.0, E = 1.8e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+ ++sHELRTPLt+Irg+a+lL ++l ++l +eq
CP001364_1 507 AKTNFIGTISHELRTPLTVIRGNADLLARGLA------GPLEDEQ-- 545

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++e i+ +a+ + +Li+++ +++ +++g
CP001364_1 546 ----------KSFVEAIRLQANNMTNLISNVITIANLDSG 575

CP001364_2209: domain 1 of 1, from 169 to 237: score 74.5, E = 9.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla+lsHELRTPLt+++gy+el +++ ++l+++q
CP001364_2 169 MKDQFLATLSHELRTPLTSLLGYLELFDRGM------LGPLTPQQ-- 207

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++++++r++e l r++n+lL + ++
CP001364_2 208 ----------EEAVRVMRRSSEVLARQLNNLLYFQEVRSR 237

CP001364_3356: domain 1 of 1, from 613 to 681: score 73.6, E = 1.6e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fla++sH+LR PLtaIr+ +e Lle++ ++ s+ ++
CP001364_3 613 LKSTFLAGVSHDLRSPLTAIRASVEDLLERQ-------HHVSPGEH- 651

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+ i re+ rl+r +++lLdlsrieag
CP001364_3 652 ----------RALLSNIARETARLSRFVDQLLDLSRIEAG 681

CP001364_1359: domain 1 of 1, from 244 to 316: score 71.0, E = 9.3e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks f+a++sHELRTPL+ I+g++ ++le + + ++ +
CP001364_1 244 SKSNFMATMSHELRTPLNIIIGFSTAMLE-------HPEMYGDVRI- 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
d + + + i+r++++ll Lind+Ldl++ eag
CP001364_1 283 ------DEQVLQDIAEIRRSGQHLLGLINDILDLAKVEAG 316

CP001364_4073: domain 1 of 1, from 223 to 287: score 68.2, E = 5.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a+++H+LRTPLt+I gy+e+L++ +el++ ++
CP001364_4 223 LRRRMTADIAHDLRTPLTVIAGYLEALRD---------AELPATPAR 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ e++ llrL++dl +ls ++ag
CP001364_4 261 -------------FAAMHTETQTLLRLVEDLHTLSLADAG 287

CP001364_3578: domain 1 of 1, from 153 to 217: score 67.6, E = 8.3e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +la++ HELRTPL++I gy e Ll+++ +++ +
CP001364_3 153 RRLALLADVTHELRTPLATIGGYMEGLLDGV-------VSANPAT-- 190

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ilre++rl+rLi+dl lsr eag
CP001364_3 191 -------------FNLILRETRRLQRLIEDLELLSRVEAG 217

CP001364_3034: domain 1 of 1, from 185 to 250: score 66.6, E = 1.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++an+sHELRTPL+++++++e+ + ++ ++
CP001364_3 185 ARRDLVANVSHELRTPLASLKLLVETVQS---------APPPDIA-- 220

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++le + +e++ +L+++l +lsr+e+g
CP001364_3 221 ----------SRMLEQMAQEIDAVTQLVDELHELSRLESG 250

CP001364_0927: domain 1 of 1, from 226 to 290: score 62.5, E = 2.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HELRTPL+ I+g +e ++++++ e+++eq
CP001364_0 226 QRRQLTADIAHELRTPLSIIKGRLEGIQDGVY-------EADAEQ-- 263

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +l e+ l+rLindl l+ ++ag
CP001364_0 264 -------------IEALLTEVALLERLINDLHLLALADAG 290

CP001364_2571: domain 1 of 1, from 254 to 321: score 61.8, E = 3.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+a+++HE+RTPLta+r +e+Ll+ ++++++q++
CP001364_2 254 AQRRFIADAAHEMRTPLTALRSGLEVLLR---------GAQDDPQTA 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++++r++ rl + ++lLd +r e+g
CP001364_2 292 ----------FRLIQSMHRDVVRLCNVSEQLLDKARYESG 321

CP001364_1257: domain 1 of 1, from 495 to 564: score 58.0, E = 4.3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla ++HELR PL+a+r ya+lLl+ + e + +
CP001364_1 495 AKDEFLAVAAHELRSPLAAVRSYADLLLR-----REQQREGDHRD-- 534

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l ++ +++ ++lrL+++lLd sr++ag
CP001364_1 535 ----------LHGLTILSQQVAHMLRLVDNLLDVSRLDAG 564

CP001364_2568: domain 1 of 1, from 153 to 217: score 56.2, E = 1.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++ +++HELRTPL++I gy+e +l+++ e +e +
CP001364_2 153 RRVALIGDVAHELRTPLATIAGYVEGILDGV-------VETDEAT-- 190

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+e++rl+rL +dl +lsr e+
CP001364_2 191 -------------WALVLDEVNRLRRLTDDLQQLSRVESR 217

CP001364_0553: domain 1 of 1, from 126 to 194: score 55.7, E = 1.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+a++sH+L+ PL +I gy++lLl+ + + l+e+
CP001364_0 126 ELETFTATISHDLKAPLRVIDGYSQLLLR------FHIQRLDEDG-- 164

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++i+ ++ ++++Li+dlL+++ e
CP001364_0 165 ----------QQCLHSIRTAVAQMNQLIDDLLEYTHVERK 194

CP001364_2992: domain 1 of 1, from 923 to 991: score 49.0, E = 1.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++++ H+L++PL+aI+++ e L++el ++l e +
CP001364_2 923 LREDLIRMVIHDLKNPLAAIKLAFERLENEL-------GDLFTERQ- 961

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + ++ ++rl +L++ +Ld+ r+e+g
CP001364_2 962 ----------QQAMMIGQNNTNRLINLVRAMLDIGRLESG 991

CP001364_1939: domain 1 of 1, from 472 to 542: score 47.1, E = 5.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ l+HELR+PL+++ g++++ l+e+dk ++l+e q
CP001364_1 472 QRREFIGKLAHELRNPLNVLNGNLDIVLKESDK----VGTLTEAQ-- 512

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l ++++ +rl + i++l ++ r ++
CP001364_1 513 ----------RYFLGEVKDSYKRLWKRIEELIEINRNGTS 542

CP001364_1023: domain 1 of 1, from 258 to 324: score 47.0, E = 5.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++a+++HE+++PL a r + l + +l + +++q
CP001364_1 258 AVGELAASVAHEINNPLYAARNSLYLVEQDL--------PPDAPQ-- 294

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l ++++e+ r+ r+i +++d+ r g
CP001364_1 295 ----------RTFLTIAQQELGRIARIITRMRDFYRPSRG 324

CP001364_1883: domain 1 of 1, from 195 to 261: score 46.6, E = 7.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++++ H++R PL++++ +++L++ + ++ r
CP001364_1 195 NHEDQTRMVVHDMRAPLHTLLISLKALER---------QGFDAGAR- 231

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le++++++++ll Li+ +Ld +r+e+
CP001364_1 232 ----------QELLEVARESSNYLLGLIDTVLDTARLETS 261

CP001364_1537: domain 1 of 1, from 431 to 496: score 46.2, E = 9.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a+++HE+++ L++++gya+l l+ + + e +
CP001364_1 431 AVGTFAASIAHEFNNLLSGMLGYAQLGLA----------DDDVEMK- 466

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+++l+ +r +++ lL+++r +
CP001364_1 467 ----------NEALKVVLDTCKRGRSITGSLLTFARRRDS 496

CP001364_3527: domain 1 of 2, from 670 to 736: score 46.1, E = 1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g++el+ + +++ +
CP001364_3 670 AIGQLAGGIAHDFNNILTVITGNVELAML---------EIAPDHPI- 706

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
le++++++ r ++L+++lL+++r + g
CP001364_3 707 ----------YPELESVRQSTARASELVRQLLTFARRQPG 736

CP001364_3734: domain 1 of 1, from 471 to 539: score 44.9, E = 2.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L+ PL +I+g+a ++++l ++ e +
CP001364_3 471 ELEQFTYTVSHDLKSPLITIKGFAGYIERDL-------AAGRLERI- 509

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++i+ +a+r+ +L++dlL lsr++ +
CP001364_3 510 ----------PADIQRIKVAADRMYQLLEDLLNLSRAGRQ 539

CP001364_2168: domain 1 of 1, from 429 to 495: score 44.0, E = 4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++HE+++PL a++ +++lL+ ++ls+e r
CP001364_2 429 AIGRLATAMAHEINNPLQALSSTVHLLQH---------SDLSPERR- 465

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl ++ e++ l + ++++Ld+sr
CP001364_2 466 ----------DLYLTKAAAELDGLIQRVQRILDISRPNLD 495

CP001364_1220: domain 1 of 1, from 274 to 340: score 39.7, E = 6.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s fl l H++R+PL++I++++elL+e +l ++
CP001364_1 274 ERSTFLVRLDHDIRQPLNTIIALSELLRE----------ALATQT-- 308

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e +++i+r++++l + n lLd ++ie g
CP001364_1 309 --------MFAEDIDKIRRAGRHLVNRFNLLLDSAKIEIG 340

CP001364_2245: domain 1 of 1, from 671 to 737: score 35.4, E = 1.1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++ +l+H++++ L I+g+++l l + +++e +
CP001364_2 671 ALGLLTGGLAHDFNNLLGIIIGNLDLSLS---------DWQGDEAT- 707

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++++++l++a r +L lL +r +
CP001364_2 708 ----------RQAIDSALQAALRGAELTKSLLAVARRQPL 737

CP001364_3694: domain 1 of 1, from 492 to 558: score 31.3, E = 1.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ Lt+I+g+++l+l +l++ +
CP001364_3 492 SLGLLAGGIAHDFNNLLTGIMGHTSLALI----------DLPPNH-- 526

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e + l i+++a+r +L +lL ++ ++
CP001364_3 527 --------ELQPHLAAIDQAAQRAAELCHQLLVYAGRGQR 558

CP001364_0245: domain 1 of 1, from 275 to 341: score 29.2, E = 6.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++++++H+L++ L I+g+ae+ + ++ +
CP001364_0 275 AIGALTSGIAHDLNNLLVPIIGFAEMGML---------EVTPDNPL- 311

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i+ ++ r +L +++L++sr +
CP001364_0 312 ----------YSDFDQIRAAGIRATALTRRILTFSRQQRM 341


Histogram of all scores:
score obs exp (one = represents 13 sequences)
----- --- ---
-15 1 0|=
-14 19 0|==
-13 86 3|*======
-12 175 95|=======*======
-11 332 493|========================== *
-10 626 914|================================================= *
-9 739 944|========================================================= *
-8 742 707|======================================================*===
-7 520 445|==================================*=====
-6 375 256|===================*=========
-5 213 140|==========*======
-4 109 75|=====*===
-3 71 39|==*===
-2 40 20|=*==
-1 22 10|*=
0 17 5|*=
1 9 2|*
2 8 1|*
3 3 0|=
4 0 0|
5 1 0|=
6 0 0|
7 1 0|=
> 8 50 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 452.5441
P(chi-square) = 0

Total sequences searched: 4159

Whole sequence top hits:
tophits_s report:
Total hits: 43
Satisfying E cutoff: 43
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 43
Satisfying E cutoff: 43
Total memory: 38K


Acknowledgements:

This research is funded by:

Developed by: