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Classification of phyla is from NCBI page
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132 projects found  

5 accessions found for Methylobacterium extorquens AM1  

Data for CP001510  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001510.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001510_1584 CDS_1783967-1787344 95.3 1.4e-26 1
CP001510_4507 CDS_4978364-4976268 95.2 1.5e-26 1
CP001510_3481 CDS_3889539-3886795 93.6 4.3e-26 1
CP001510_4266 CDS_4732423-4734834 92.2 1.1e-25 1
CP001510_1502 CDS_1697027-1702840 89.4 6.5e-25 1
CP001510_0639 CDS_711360-709819 88.2 1.5e-24 1
CP001510_0337 CDS_378918-381278 86.3 4.9e-24 1
CP001510_2662 CDS_3001651-3002943 80.6 2e-22 1
CP001510_0493 CDS_547998-546058 75.6 5.4e-21 1
CP001510_1624 CDS_1827911-1826274 74.1 1.4e-20 1
CP001510_3348 CDS_3745471-3748686 71.4 8.5e-20 1
CP001510_0943 CDS_1059373-1057523 68.5 5.6e-19 1
CP001510_4511 CDS_4984280-4981737 67.2 1.3e-18 1
CP001510_0123 CDS_138164-140881 65.6 3.7e-18 1
CP001510_2385 CDS_2711684-2713000 57.3 8e-16 1
CP001510_4154 CDS_4605595-4603781 56.6 1.3e-15 1
CP001510_4099 CDS_4545513-4543186 56.5 1.4e-15 1
CP001510_1090 CDS_1261752-1260436 55.8 2.2e-15 1
CP001510_2795 CDS_3155887-3157020 53.0 1.4e-14 1
CP001510_3824 CDS_4231620-4233029 52.4 2.1e-14 1
CP001510_1669 CDS_1873327-1874670 49.9 1e-13 1
CP001510_1702 CDS_1917637-1916102 48.3 3e-13 1
CP001510_1028 CDS_1175374-1172480 48.0 3.7e-13 1
CP001510_3116 CDS_3488148-3489749 46.1 1.2e-12 1
CP001510_0965 CDS_1088191-1086311 46.1 1.2e-12 1
CP001510_0211 CDS_241818-240388 46.0 1.3e-12 1
CP001510_0017 CDS_21390-19345 45.9 1.4e-12 1
CP001510_2798 CDS_3160363-3162732 44.6 3.2e-12 1
CP001510_3478 CDS_3884193-3882646 43.4 7e-12 1
CP001510_2514 CDS_2851880-2849169 42.8 1e-11 1
CP001510_3547 CDS_3948287-3946737 42.3 1.5e-11 1
CP001510_4309 CDS_4773620-4776880 41.0 3.4e-11 1
CP001510_3041 CDS_3403031-3404908 38.6 1.6e-10 1
CP001510_2335 CDS_2662126-2664657 38.0 2.5e-10 1
CP001510_1477 CDS_1672135-1670831 37.6 3.2e-10 1
CP001510_2819 CDS_3187099-3188967 36.9 5e-10 1
CP001510_1432 CDS_1615188-1616813 35.5 1.3e-09 1
CP001510_0390 CDS_444715-446109 35.0 1.7e-09 1
CP001510_2496 CDS_2830797-2829391 33.1 5.9e-09 1
CP001510_1930 CDS_2193721-2195541 30.5 3.2e-08 1
CP001510_2818 CDS_3185369-3187102 28.6 1.1e-07 1
CP001510_4215 CDS_4673990-4675243 27.5 2.3e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001510_1584 1/1 589 655 .. 1 87 [] 95.3 1.4e-26
CP001510_4507 1/1 180 245 .. 1 87 [] 95.2 1.5e-26
CP001510_3481 1/1 272 337 .. 1 87 [] 93.6 4.3e-26
CP001510_4266 1/1 287 355 .. 1 87 [] 92.2 1.1e-25
CP001510_1502 1/1 1247 1315 .. 1 87 [] 89.4 6.5e-25
CP001510_0639 1/1 257 326 .. 1 87 [] 88.2 1.5e-24
CP001510_0337 1/1 524 593 .. 1 87 [] 86.3 4.9e-24
CP001510_2662 1/1 184 251 .. 1 87 [] 80.6 2e-22
CP001510_0493 1/1 350 419 .. 1 87 [] 75.6 5.4e-21
CP001510_1624 1/1 298 368 .. 1 87 [] 74.1 1.4e-20
CP001510_3348 1/1 607 673 .. 1 87 [] 71.4 8.5e-20
CP001510_0943 1/1 366 431 .. 1 87 [] 68.5 5.6e-19
CP001510_4511 1/1 611 679 .. 1 87 [] 67.2 1.3e-18
CP001510_0123 1/1 672 740 .. 1 87 [] 65.6 3.7e-18
CP001510_2385 1/1 226 291 .. 1 87 [] 57.3 8e-16
CP001510_4154 1/1 225 291 .. 1 87 [] 56.6 1.3e-15
CP001510_4099 1/1 401 467 .. 1 87 [] 56.5 1.4e-15
CP001510_1090 1/1 226 291 .. 1 87 [] 55.8 2.2e-15
CP001510_2795 1/1 139 203 .. 1 87 [] 53.0 1.4e-14
CP001510_3824 1/1 243 301 .. 1 87 [] 52.4 2.1e-14
CP001510_1669 1/1 89 154 .. 1 87 [] 49.9 1e-13
CP001510_1702 1/1 281 352 .. 1 87 [] 48.3 3e-13
CP001510_1028 1/1 802 868 .. 1 87 [] 48.0 3.7e-13
CP001510_3116 1/1 162 232 .. 1 87 [] 46.1 1.2e-12
CP001510_0965 1/1 382 450 .. 1 87 [] 46.1 1.2e-12
CP001510_0211 1/1 250 316 .. 1 87 [] 46.0 1.3e-12
CP001510_0017 1/1 303 369 .. 1 87 [] 45.9 1.4e-12
CP001510_2798 1/1 508 579 .. 1 87 [] 44.6 3.2e-12
CP001510_3478 1/1 289 360 .. 1 87 [] 43.4 7e-12
CP001510_2514 1/1 489 555 .. 1 87 [] 42.8 1e-11
CP001510_3547 1/1 286 357 .. 1 87 [] 42.3 1.5e-11
CP001510_4309 1/1 713 781 .. 1 87 [] 41.0 3.4e-11
CP001510_3041 1/1 387 455 .. 1 87 [] 38.6 1.6e-10
CP001510_2335 1/1 617 686 .. 1 87 [] 38.0 2.5e-10
CP001510_1477 1/1 66 132 .. 1 87 [] 37.6 3.2e-10
CP001510_2819 1/1 261 327 .. 1 87 [] 36.9 5e-10
CP001510_1432 1/1 163 233 .. 1 87 [] 35.5 1.3e-09
CP001510_0390 1/1 209 277 .. 1 87 [] 35.0 1.7e-09
CP001510_2496 1/1 265 323 .. 1 87 [] 33.1 5.9e-09
CP001510_1930 1/1 367 444 .. 1 87 [] 30.5 3.2e-08
CP001510_2818 1/1 348 426 .. 1 87 [] 28.6 1.1e-07
CP001510_4215 1/1 171 237 .. 1 87 [] 27.5 2.3e-07

Alignments of top-scoring domains:
CP001510_1584: domain 1 of 1, from 589 to 655: score 95.3, E = 1.4e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHE+RTPL++I+gya+lLl+ + + ++e+
CP001510_1 589 AKSEFLAAMSHEIRTPLNGILGYADLLLD--------RRDHDPED-- 625

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le i+ ++e+ll +nd+Ld s+ieag
CP001510_1 626 ----------QRRLELIRVSGESLLTVVNDVLDVSKIEAG 655

CP001510_4507: domain 1 of 1, from 180 to 245: score 95.2, E = 1.5e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL++I+g+a+lLl+ t l++eq
CP001510_4 180 AKSRFLATVSHELRTPLNGILGMADLLLD---------TRLDPEQ-- 215

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+e + +++ ll L++ +Ld+srieag
CP001510_4 216 ----------RTYVEAFRTSGKALLGLVDGILDFSRIEAG 245

CP001510_3481: domain 1 of 1, from 272 to 337: score 93.6, E = 4.3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP+++++ +aelL ++l++ q
CP001510_3 272 AKSVFLATMSHEIRTPMNGMLVMAELLAS---------ADLPPRQ-- 307

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++i r++++ll++ind+Ld+++ eag
CP001510_3 308 ----------QRYAKVIARSGQSLLAIINDILDFAKVEAG 337

CP001510_4266: domain 1 of 1, from 287 to 355: score 92.2, E = 1.1e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHELRTPL+a++gy+e+L eel ++l+ ++
CP001510_4 287 AKSQFLANMSHELRTPLSAVIGYSEMLGEEL-------EDLGQAEL- 325

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i+++a++ll Lind+Ld+s+ieag
CP001510_4 326 ----------LPDLRKIESSARHLLGLINDVLDISKIEAG 355

CP001510_1502: domain 1 of 1, from 1247 to 1315: score 89.4, E = 6.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHELRTPL++++ +++lL e +d++l+++q
CP001510_1 1247 YKSQFLANMSHELRTPLNSLLILSKLLSE------NRDGNLTDKQ-- 1285

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ +ti ++ ll+Lind+Ldls+ie+g
CP001510_1 1286 ----------REFAKTINAAGTDLLSLINDILDLSKIESG 1315

CP001510_0639: domain 1 of 1, from 257 to 326: score 88.2, E = 1.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL+aI+g++e++++e++ ++ ++
CP001510_0 257 AKSRFLATMSHELRTPLNAILGFSEVMKNEVF------GAHVAPA-- 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yrey i++++ +ll+Lin++Ldlsrieag
CP001510_0 296 ---------YREYATDIHDSGMHLLNLINEILDLSRIEAG 326

CP001510_0337: domain 1 of 1, from 524 to 593: score 86.3, E = 4.9e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL+aI+g+ael++ e++ + l+++
CP001510_0 524 AKSEFLANMSHELRTPLNAIMGFAELMESEVY------GSLGSPR-- 562

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++y + i++++ +ll+ i+d+L +sriea
CP001510_0 563 ---------YADYCRDIQQSGTYLLSVIDDILHMSRIEAK 593

CP001510_2662: domain 1 of 1, from 184 to 251: score 80.6, E = 2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPL+a++g++e+L+ +++++ +++
CP001510_2 184 MRVDFVANASHELRTPLAALLGFIETLQG---------PARDDAHAR 221

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +++ +a+r+ Li+dlL lsrie
CP001510_2 222 ----------EQFLGIMRTQAQRMTGLIDDLLSLSRIELH 251

CP001510_0493: domain 1 of 1, from 350 to 419: score 75.6, E = 5.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fla++sHELRTPL+aI+g++++L e+ ls+e
CP001510_0 350 VKTHFLATVSHELRTPLNAIIGFSDVLGGEGA------VSLSPERS- 389

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey +i +++++ll+ +n lLd+sri+ g
CP001510_0 390 ----------REYAGIIAQSGRHLLDVVNTLLDISRIRGG 419

CP001510_1624: domain 1 of 1, from 298 to 368: score 74.1, E = 1.4e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTPLt+I+g ++l+++ ++e+ + +
CP001510_1 298 SRRRFFADVSHELRTPLTVILGECDLAQR--------SAERAAGRMV 336

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ti++ a+rl r ++dlL +r e+g
CP001510_1 337 DY--------GPVFTTIRKRAQRLKRRVEDLLRVARSESG 368

CP001510_3348: domain 1 of 1, from 607 to 673: score 71.4, E = 8.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ + ++sHELRTPL+a++gya+lL+ d+ +e+
CP001510_3 607 AKSRYVVGISHELRTPLNAVLGYAQLLEG--------DPSIPEPR-- 643

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++i+r+a++l+ Li+ lLd+sr+eag
CP001510_3 644 ----------RNGIRVIRRSAQHLSGLIDGLLDISRMEAG 673

CP001510_0943: domain 1 of 1, from 366 to 431: score 68.5, E = 5.6e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a++sHEL++PLt++r ++e+L ++++e r
CP001510_0 366 AIESFAADVSHELKNPLTSLRSAVETLPL----------AKTDESR- 401

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++i+++++rl+rLi+d+ d sr++a+
CP001510_0 402 ----------GRLMQIIQHDVKRLDRLISDISDASRLDAE 431

CP001510_4511: domain 1 of 1, from 611 to 679: score 67.2, E = 1.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ ++s ELR PLt I+g+++lL +e ++l+e q
CP001510_4 611 LRDTFVHHVSYELRSPLTNIIGFTQLLGDET------VGALNERQ-- 649

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey e i r++ ll +ind+Ldl+ i+ag
CP001510_4 650 ----------REYSEHIMRSSAALLVIINDILDLASIDAG 679

CP001510_0123: domain 1 of 1, from 672 to 740: score 65.6, E = 3.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +l ++sH+LRTPL++++g+a++L++ l+ ++l+ e +
CP001510_0 672 LARALLTSISHDLRTPLASVLGAASTLRD-LE------GALPVESK- 710

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l ti++e+erl+r i +lLd++r+eag
CP001510_0 711 ----------AELLTTIIEESERLNRFIVNLLDMTRLEAG 740

CP001510_2385: domain 1 of 1, from 226 to 291: score 57.3, E = 8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+e +a ++HELRTPL+++++ a+++ + + ++
CP001510_2 226 HEREVTAFAAHELRTPLAGLKTQAQVAMA---------ARDPDVA-- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l il +++r rL+++lLd +r++a+
CP001510_2 262 ----------KAALGQILAAVDRTTRLVRQLLDAARLDAE 291

CP001510_4154: domain 1 of 1, from 225 to 291: score 56.6, E = 1.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+ ++lL++ ++l ee r
CP001510_4 225 AVGQLTGGVAHDFNNLLTVIKSSTDLLKR---------PDLAEERR- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ i + + r +L +lL ++r +a
CP001510_4 262 ----------RRYVDAISDTVARAAKLTGQLLAFARRQAL 291

CP001510_4099: domain 1 of 1, from 401 to 467: score 56.5, E = 1.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt Ir +e L++ ++l +e +
CP001510_4 401 AVGQLTGGVAHDFNNLLTIIRSSVEFLRR---------PDLAPERK- 437

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+ + + ++r +L +lL ++r +a
CP001510_4 438 ----------RRYLDAVSDTVDRAAKLTGQLLAFARRQAL 467

CP001510_1090: domain 1 of 1, from 226 to 291: score 55.8, E = 2.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+e +a ++HELRTPL++++ a+++ + ++ ++
CP001510_1 226 HEREVTAFAAHELRTPLAGLKVQAQVAMA---------ATDPDVA-- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ il +++r rL+++lLd +r++a
CP001510_1 262 ----------KAALRQILAAVDRTTRLVRQLLDAARLDAA 291

CP001510_2795: domain 1 of 1, from 139 to 203: score 53.0, E = 1.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + a+l+HE+++PL++Irg+a+lL+ e +ee+
CP001510_2 139 SMVALGAMLAHEIKNPLAGIRGAAQLLEQ----------ESDEED-- 173

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++ i +e++r+ r+++++ + +
CP001510_2 174 ----------RLLTRLICDESDRIVRIVERMELFGDERPV 203

CP001510_3824: domain 1 of 1, from 243 to 301: score 52.4, E = 2.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++la++sH+LRTP+t +r+ ae +++
CP001510_3 243 DRTQMLAAISHDLRTPITRLRLRAEFIED------------------ 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e lr++++++ L++ L + r ++g
CP001510_3 272 ----------ERAREMTLRDLDQMNGLVESALSYVRDGQG 301

CP001510_1669: domain 1 of 1, from 89 to 154: score 49.9, E = 1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+ +++L + + + e
CP001510_1 89 SKTRFLAAASHDLLQPLNAARLSLSALTD---------LAPGLEA-- 124

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + ++r +e +++Li l d+s+++ag
CP001510_1 125 ----------QGIARQVERGLETIEDLIKALIDISKLDAG 154

CP001510_1702: domain 1 of 1, from 281 to 352: score 48.3, E = 3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PLtaI y++ +++ e+se++++
CP001510_1 281 AMGEMASTLAHELNQPLTAITNYLKGCRR--------LLERSEDEHA 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p re+++ + ++a r ++i++l+++ ++
CP001510_1 320 PTI-------REAVNHAADQAIRAGQIIRRLREFVSRGES 352

CP001510_1028: domain 1 of 1, from 802 to 868: score 48.0, E = 3.7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++H++++ Lt I+g +++L++ l+ e
CP001510_1 802 AMGQLTGGVAHDFNNLLTPIIGSLDMLQR---------KQLGNERE- 838

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ + ++aer L+++lL ++r +
CP001510_1 839 ----------QRLIAGAMQSAERAKTLVQRLLAFARRQPL 868

CP001510_3116: domain 1 of 1, from 162 to 232: score 46.1, E = 1.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L +I+gya+ L ++ld +++++ +
CP001510_3 162 AIGRLTGGIAHDFNNLLQVILGYADSLATNLD-----RPDADRGRM- 202

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i+++aer + L ++lL ++r +
CP001510_3 203 ----------GRAVGNIREAAERASTLTQQLLSFARKQRL 232

CP001510_0965: domain 1 of 1, from 382 to 450: score 46.1, E = 1.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a++ HEL++PL+a+rg+a+ + ++l ++ + +e
CP001510_0 382 TLGQMAAGITHELNQPLAAMRGLADNASAFL------RQGREAEA-- 420

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l +i + ++rl ++ +l+ +sr
CP001510_0 421 ----------AANLTRIVSLVDRLGKITGQLRSFSRRSGT 450

CP001510_0211: domain 1 of 1, from 250 to 316: score 46.0, E = 1.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e n++H+L+TPLt +r a+ +l+ t+ ++e +
CP001510_0 250 GMREVSDNIAHDLKTPLTRLRNRADEALR---------TAETPEAL- 286

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + e ++++++ l r n lL+++r+eag
CP001510_0 287 ----------RTAMEGVIEDSDGLIRVFNALLTIARLEAG 316

CP001510_0017: domain 1 of 1, from 303 to 369: score 45.9, E = 1.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g ++++l+ ++++++
CP001510_0 303 AIGQLTGGVAHDFNNLLTVIVGGLDMMLR--------RPDQPDRV-- 339

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e + +a+r ++L ++lL +sr +
CP001510_0 340 ----------KRLAEAAMGAARRGEQLTQQLLAFSRRQML 369

CP001510_2798: domain 1 of 1, from 508 to 579: score 44.6, E = 3.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ ++HE+++PLt I++ ae +++++ g +++++
CP001510_2 508 AWADVARRIAHEIKNPLTPIQLSAERIRRKY-----GKVITTDKDV- 548

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + ti r+++ + r+++++ ++r+ +
CP001510_2 549 ---------FEQCTATIVRQVDEIKRMVDEFSSFARMPKP 579

CP001510_3478: domain 1 of 1, from 289 to 360: score 43.4, E = 7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++ +l+HEL++PL aI y+ +++ l ++ ++e+++
CP001510_3 289 AMGEMATTLAHELNQPLGAITNYTNGCRRLL-------AHPDPETIA 328

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +e l+++ ++a r +++i +l+++ ++
CP001510_3 329 RA--------QEVLDKAAEQALRARQIIARLREFVARGET 360

CP001510_2514: domain 1 of 1, from 489 to 555: score 42.8, E = 1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++H++++ L aI+gy++lLl+ ++++ +++
CP001510_2 489 TVGQLAGGIAHDFNNVLQAIIGYSDLLLA---------SHRPTDHA- 525

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i++ a+r +L+++lL +sr ++
CP001510_2 526 ----------FQDIMQIKQNANRAASLVRQLLAFSRRQTL 555

CP001510_3547: domain 1 of 1, from 286 to 357: score 42.3, E = 1.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PL aI y++ +++ l ++ ++e ++
CP001510_3 286 AMGEMASTLAHELNQPLGAIANYTKGCRRLL-------ANPGPEAIA 325

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e l++ ++a r ++i++l+++ ++
CP001510_3 326 KS--------MEVLDKTAEQALRAGQIIRQLREFVMRGET 357

CP001510_4309: domain 1 of 1, from 713 to 781: score 41.0, E = 3.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ Lt+I g +elL+++l ++ r+
CP001510_4 713 AVGQLTGGLAHDFNNLLTGITGSLELLQTRL-----------AQGRI 748

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +y++ ++ +a+r +L +lL +sr ++
CP001510_4 749 TEI-------DRYVNAAQGAAKRAAALTHRLLAFSRRQTL 781

CP001510_3041: domain 1 of 1, from 387 to 455: score 38.6, E = 1.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+a+++HE+++PL+aIr ya+ + e++
CP001510_3 387 ALGQFAASMAHEINQPLAAIRSYADNTAILV-------RRGRVEDA- 425

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++ i r +er+ L ++l ++r +g
CP001510_3 426 ----------AENVSAIGRLTERIGTLTRQLKGFARRASG 455

CP001510_2335: domain 1 of 1, from 617 to 686: score 38.0, E = 2.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k la +s E+R L+aI+g+++++l + + + +++e +
CP001510_2 617 WKANALARVSREIRPSLNAILGLTDMMLSDRF------DRADAERL- 656

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ ++ ++ r+ +Li+dlLdl+ i+ag
CP001510_2 657 ----------EAYLREVRLSGGRIAALIDDLLDLAEIQAG 686

CP001510_1477: domain 1 of 1, from 66 to 132: score 37.6, E = 3.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g+++++ + + +++ +
CP001510_1 66 AIGQLTGGVAHDFNNLLTVIVGNLDMIVR---------KPDDAKRV- 102

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++ +a+r + + lL +sr +
CP001510_1 103 ----------ERLAASAMTAAKRGAEVTEKLLSFSRRQVL 132

CP001510_2819: domain 1 of 1, from 261 to 327: score 36.9, E = 5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++ +++H++++ LtaI+g +el ++ + +
CP001510_2 261 ALGTLAGGIAHDFNNLLTAILGSLELVGP---------KIADQPRV- 297

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ + +a+r ++L +lL +sr
CP001510_2 298 ----------KRLVDNATGAAQRGSALTKRLLSFSRSNDA 327

CP001510_1432: domain 1 of 1, from 163 to 233: score 35.5, E = 1.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++ +++H++++ L +++g+ e++l+ l+ ++l+ +
CP001510_1 163 SLGQLTGGIAHDFNNLLQVVSGHNEVMLA-----LLDHPTLDVSRM- 203

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ e ++ +++r +L +lL +sr +
CP001510_1 204 ----------RRAGEAVRAATDRAAKLTHQLLAFSRKQRL 233

CP001510_0390: domain 1 of 1, from 209 to 277: score 35.0, E = 1.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+++HEL TPL +I++ a+ L ++l ++ ++ +
CP001510_0 209 QLDGLAAAAAHELGTPLGTIMLVAKELDRQL-------GPTASPAI- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+ ++++++r++ +++ l + ++
CP001510_0 248 ----------AEDLSLLRDQVDRCRGILSKLTSMGEENEE 277

CP001510_2496: domain 1 of 1, from 265 to 323: score 33.1, E = 5.9e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l ++sH+LRT +t ++ + l +
CP001510_2 265 QRTAMLNGVSHDLRTIITRFKLSLALVEQ------------------ 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++r+++ ++r+++ L ++r ++
CP001510_2 294 ----------TPEVEDLQRDVDEMSRMLEGYLAFARGDSA 323

CP001510_1930: domain 1 of 1, from 367 to 444: score 30.5, E = 3.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
k+e l +++H+L++PL++I+g +e+L + + + +++s ++
CP001510_1 367 LKTEILGTIAHDLKNPLSVILGRSEMLTD----LiGLDQGDASGAEK 409

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ +e i+ +a rl ++i+ l+ + +a
CP001510_1 410 AQAA------MLTQVEHIRASATRLIDMIDSLMADALNDAL 444

CP001510_2818: domain 1 of 1, from 348 to 426: score 28.6, E = 1.1e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++a+++HE+++PL+ I+++ + ++ l ++l++++ +
CP001510_2 348 SLGELVAGIAHEINNPLAFILAHQGTVERLL-------GDLPPPD-A 386

peLR.....ledpeyreyletilreaerllrLindlLdlsrieag<-*
pe+ + + r+ + +++ + r+++L+ +l+ +sr+++g
CP001510_2 387 PEGQralmkA-----RDRVGSMRLGLTRIQDLVLNLRKFSRLDEG 426

CP001510_4215: domain 1 of 1, from 171 to 237: score 27.5, E = 2.3e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L++++++++ +++l +e+s+ ++
CP001510_4 171 AIGQLTGGVAHDFNNLLNVVLLNLDRVERGL-------PEASPLRTR 210

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ + + aer + lL ++r +
CP001510_4 211 -------------LRDAVKGAERAATMTHKLLAFARRQPL 237


Histogram of all scores:
score obs exp (one = represents 16 sequences)
----- --- ---
-17 1 0|=
-16 0 0|
-15 4 0|=
-14 22 0|==
-13 91 3|*=====
-12 265 113|=======*=========
-11 436 589|============================ *
-10 843 1092|===================================================== *
-9 939 1128|==========================================================*
-8 845 845|====================================================*
-7 629 532|=================================*======
-6 366 306|===================*===
-5 202 168|==========*==
-4 130 89|=====*===
-3 58 47|==*=
-2 35 24|=*=
-1 21 13|*=
0 17 6|*=
1 6 3|*
2 2 1|*
3 3 0|=
4 1 0|=
5 0 0|
6 1 0|=
> 7 53 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 410.8188
P(chi-square) = 0

Total sequences searched: 4970

Whole sequence top hits:
tophits_s report:
Total hits: 42
Satisfying E cutoff: 42
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 42
Satisfying E cutoff: 42
Total memory: 37K


Acknowledgements:

This research is funded by:

Developed by: