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Thermotogae
Classification of phyla is from NCBI page
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41 projects found  

1 accessions found for Dyadobacter fermentans DSM 18053  

Data for CP001619  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001619.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001619_1436 CDS_1743210-1739854 106.0 1.5e-29 2
CP001619_0836 CDS_1015210-1020825 93.0 7.3e-26 1
CP001619_5676 CDS_6918705-6922319 93.0 7.4e-26 1
CP001619_0258 CDS_290615-294478 92.9 7.8e-26 1
CP001619_5233 CDS_6413375-6415507 91.9 1.4e-25 1
CP001619_3263 CDS_4070678-4072681 90.7 3.3e-25 1
CP001619_2470 CDS_3109497-3111854 89.7 6.3e-25 1
CP001619_1108 CDS_1348195-1346252 85.5 9.9e-24 1
CP001619_0169 CDS_199437-196831 82.4 7.4e-23 1
CP001619_1111 CDS_1353040-1349612 82.2 8.3e-23 1
CP001619_0389 CDS_450917-447315 82.1 9.1e-23 1
CP001619_3176 CDS_3969074-3971638 78.9 7.2e-22 1
CP001619_5488 CDS_6695261-6698917 74.5 1.3e-20 1
CP001619_0378 CDS_435713-437446 74.0 1.8e-20 1
CP001619_2195 CDS_2761467-2758213 72.0 6.5e-20 1
CP001619_5237 CDS_6420245-6418980 66.0 3.2e-18 1
CP001619_1577 CDS_1942366-1946466 65.1 5.9e-18 1
CP001619_3338 CDS_4159208-4160293 64.6 8.1e-18 1
CP001619_2703 CDS_3416268-3414898 63.8 1.3e-17 1
CP001619_1722 CDS_2148933-2144899 62.2 3.9e-17 1
CP001619_0551 CDS_631777-627794 59.3 2.6e-16 1
CP001619_1545 CDS_1891867-1887731 59.2 2.7e-16 1
CP001619_1574 CDS_1935856-1938570 55.9 2.4e-15 1
CP001619_0272 CDS_312194-313564 55.6 2.9e-15 1
CP001619_4024 CDS_4943322-4945160 54.5 6e-15 1
CP001619_2264 CDS_2864801-2868697 54.1 7.9e-15 1
CP001619_2690 CDS_3400571-3399141 51.0 5.8e-14 1
CP001619_1776 CDS_2227132-2228484 50.8 6.6e-14 1
CP001619_3097 CDS_3862564-3861341 49.7 1.4e-13 1
CP001619_0799 CDS_964611-968618 48.9 2.3e-13 2
CP001619_2686 CDS_3391953-3393320 48.8 2.4e-13 1
CP001619_0448 CDS_517237-515855 48.4 3.2e-13 1
CP001619_3500 CDS_4358529-4359779 48.2 3.5e-13 1
CP001619_0390 CDS_452526-450931 45.8 1.7e-12 1
CP001619_0291 CDS_334036-331637 45.6 1.9e-12 1
CP001619_5271 CDS_6467175-6468566 45.1 2.6e-12 1
CP001619_1462 CDS_1776652-1772438 44.9 3e-12 1
CP001619_1896 CDS_2377998-2381834 44.3 4.5e-12 1
CP001619_0335 CDS_388790-390496 43.5 7.6e-12 1
CP001619_0342 CDS_400337-398973 42.4 1.5e-11 1
CP001619_5355 CDS_6559236-6560603 41.6 2.7e-11 1
CP001619_0779 CDS_933359-929223 40.9 4.2e-11 1
CP001619_1716 CDS_2137541-2135889 40.2 6.8e-11 1
CP001619_0528 CDS_603448-599474 39.7 9.3e-11 1
CP001619_5101 CDS_6240701-6239826 39.3 1.2e-10 1
CP001619_5520 CDS_6733265-6734470 38.6 1.9e-10 1
CP001619_3261 CDS_4068836-4070173 38.1 2.6e-10 1
CP001619_1503 CDS_1831195-1829264 37.6 3.7e-10 1
CP001619_2457 CDS_3091339-3088943 36.2 9e-10 1
CP001619_2337 CDS_2951749-2952840 32.9 7.8e-09 1
CP001619_1576 CDS_1942143-1940011 28.1 1.8e-07 1
CP001619_1065 CDS_1288783-1287554 27.3 3.1e-07 1
CP001619_0879 CDS_1058071-1059546 27.1 3.4e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001619_0836 1/1 1487 1552 .. 1 87 [] 93.0 7.3e-26
CP001619_5676 1/1 691 756 .. 1 87 [] 93.0 7.4e-26
CP001619_0258 1/1 773 838 .. 1 87 [] 92.9 7.8e-26
CP001619_5233 1/1 332 397 .. 1 87 [] 91.9 1.4e-25
CP001619_3263 1/1 286 351 .. 1 87 [] 90.7 3.3e-25
CP001619_2470 1/1 414 479 .. 1 87 [] 89.7 6.3e-25
CP001619_1108 1/1 269 334 .. 1 87 [] 85.5 9.9e-24
CP001619_0169 1/1 368 433 .. 1 87 [] 82.4 7.4e-23
CP001619_1111 1/1 487 555 .. 1 87 [] 82.2 8.3e-23
CP001619_0389 1/1 527 595 .. 1 87 [] 82.1 9.1e-23
CP001619_3176 1/1 355 418 .. 1 87 [] 78.9 7.2e-22
CP001619_5488 1/1 856 922 .. 1 87 [] 74.5 1.3e-20
CP001619_0378 1/1 354 422 .. 1 87 [] 74.0 1.8e-20
CP001619_2195 1/1 722 788 .. 1 87 [] 72.0 6.5e-20
CP001619_1436 1/2 348 416 .. 1 87 [] 66.5 2.4e-18
CP001619_5237 1/1 193 261 .. 1 87 [] 66.0 3.2e-18
CP001619_1577 1/1 815 879 .. 1 87 [] 65.1 5.9e-18
CP001619_3338 1/1 119 186 .. 1 87 [] 64.6 8.1e-18
CP001619_2703 1/1 233 299 .. 1 87 [] 63.8 1.3e-17
CP001619_1722 1/1 846 912 .. 1 87 [] 62.2 3.9e-17
CP001619_0551 1/1 825 891 .. 1 87 [] 59.3 2.6e-16
CP001619_1545 1/1 863 929 .. 1 87 [] 59.2 2.7e-16
CP001619_1574 1/1 396 462 .. 1 87 [] 55.9 2.4e-15
CP001619_0272 1/1 228 294 .. 1 87 [] 55.6 2.9e-15
CP001619_4024 1/1 377 449 .. 1 87 [] 54.5 6e-15
CP001619_2264 1/1 801 866 .. 1 87 [] 54.1 7.9e-15
CP001619_2690 1/1 262 327 .. 1 87 [] 51.0 5.8e-14
CP001619_1776 1/1 231 297 .. 1 87 [] 50.8 6.6e-14
CP001619_3097 1/1 199 265 .. 1 87 [] 49.7 1.4e-13
CP001619_2686 1/1 232 298 .. 1 87 [] 48.8 2.4e-13
CP001619_0448 1/1 237 303 .. 1 87 [] 48.4 3.2e-13
CP001619_3500 1/1 196 264 .. 1 87 [] 48.2 3.5e-13
CP001619_0799 1/2 818 884 .. 1 87 [] 47.5 5.6e-13
CP001619_0390 1/1 289 356 .. 1 87 [] 45.8 1.7e-12
CP001619_0291 1/1 564 632 .. 1 87 [] 45.6 1.9e-12
CP001619_5271 1/1 243 311 .. 1 87 [] 45.1 2.6e-12
CP001619_1462 1/1 862 927 .. 1 87 [] 44.9 3e-12
CP001619_1896 1/1 763 829 .. 1 87 [] 44.3 4.5e-12
CP001619_0335 1/1 325 392 .. 1 87 [] 43.5 7.6e-12
CP001619_0342 1/1 222 288 .. 1 87 [] 42.4 1.5e-11
CP001619_5355 1/1 173 239 .. 1 87 [] 41.6 2.7e-11
CP001619_0779 1/1 852 917 .. 1 87 [] 40.9 4.2e-11
CP001619_1716 1/1 317 384 .. 1 87 [] 40.2 6.8e-11
CP001619_0528 1/1 807 873 .. 1 87 [] 39.7 9.3e-11
CP001619_1436 2/2 889 955 .. 1 87 [] 39.5 1e-10
CP001619_5101 1/1 65 130 .. 1 87 [] 39.3 1.2e-10
CP001619_5520 1/1 176 242 .. 1 87 [] 38.6 1.9e-10
CP001619_3261 1/1 222 290 .. 1 87 [] 38.1 2.6e-10
CP001619_1503 1/1 423 491 .. 1 87 [] 37.6 3.7e-10
CP001619_2457 1/1 564 632 .. 1 87 [] 36.2 9e-10
CP001619_2337 1/1 143 208 .. 1 87 [] 32.9 7.8e-09
CP001619_1576 1/1 492 553 .. 1 82 [. 28.1 1.8e-07
CP001619_1065 1/1 175 243 .. 1 87 [] 27.3 3.1e-07
CP001619_0879 1/1 256 324 .. 1 87 [] 27.1 3.4e-07

Alignments of top-scoring domains:
CP001619_0836: domain 1 of 1, from 1487 to 1552: score 93.0, E = 7.3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+an+sHE+RTP+taI+g++el+ + t+l+e+q
CP001619_0 1487 FKEQFFANMSHEIRTPMTAILGMSELIFD---------TPLNEKQ-- 1522

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey + i+ ++e ll++ind+Ld+s+ieag
CP001619_0 1523 ----------LEYARGIRYSSENLLAIINDVLDYSKIEAG 1552

CP001619_5676: domain 1 of 1, from 691 to 756: score 93.0, E = 7.4e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ flan+sHE+RTP+++++g+++lL e t+l+ eq
CP001619_5 691 VKEGFLANMSHEIRTPMNGVIGMIDLLGE---------TPLNTEQ-- 726

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+ ti+r++e ll+++nd+Ldls+ieag
CP001619_5 727 ----------KDYVLTIKRSSETLLNILNDILDLSKIEAG 756

CP001619_0258: domain 1 of 1, from 773 to 838: score 92.9, E = 7.8e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTPL+++ g+++lL + t+l+e q
CP001619_0 773 LKSEFLANMSHEIRTPLNGVVGFTDLLMK---------TNLDETQ-- 808

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y + + ++a++l ++ind+Ld+s+ieag
CP001619_0 809 ----------QQYMSMVFQSANSLMDIINDILDFSKIEAG 838

CP001619_5233: domain 1 of 1, from 332 to 397: score 91.9, E = 1.4e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+efla + HE+RTPL+aI+g+++l+ + + l+ ++
CP001619_5 332 QKGEFLAQVTHEIRTPLNAIIGFSQLMDT---------QRLDGQE-- 367

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++ i+++++ ll L+ndlLd+s++e+g
CP001619_5 368 ----------KESVDAIQSSSRILLTLVNDLLDFSKLESG 397

CP001619_3263: domain 1 of 1, from 286 to 351: score 90.7, E = 3.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fl+++sHE+RTP++aI+g+++lLl + + ++
CP001619_3 286 IKSDFLSTMSHEIRTPMNAIIGFTDLLLS---------SGFTGQE-- 321

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ti+ +a+ ll ++nd+Ld+s+ieag
CP001619_3 322 ----------QQYLNTIKYSADNLLVILNDILDFSKIEAG 351

CP001619_2470: domain 1 of 1, from 414 to 479: score 89.7, E = 6.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fl+++sHE+RTP++a++g+++lLl ++ +eq
CP001619_2 414 AKSQFLSTMSHEIRTPMNAVIGFTHLLLQ---------QDPKPEQ-- 449

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
eyl++++ +ae ll Lind+Ld+s+ieag
CP001619_2 450 ----------MEYLNILKFSAENLLVLINDILDFSKIEAG 479

CP001619_1108: domain 1 of 1, from 269 to 334: score 85.5, E = 9.9e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ flan+sHE+RTPL++I+g+ lL + telse q
CP001619_1 269 TKESFLANMSHEIRTPLNGIIGLGNLLAA---------TELSEAQ-- 304

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ +++++ +ll+++nd+Ld+s+i++g
CP001619_1 305 ----------AELVDMLRQSSGSLLNILNDILDISKIDEG 334

CP001619_0169: domain 1 of 1, from 368 to 433: score 82.4, E = 7.4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fl+n+sHE+RTPL+aI+g++ lL + + +
CP001619_0 368 VKDIFLSNVSHEIRTPLNAIIGFTNLLMG---------EVTDQKS-- 403

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+ i+ +++ ll+Lind+Ld+s+ieag
CP001619_0 404 ----------QEYVGYIQYAGKNLLELINDILDFSKIEAG 433

CP001619_1111: domain 1 of 1, from 487 to 555: score 82.2, E = 8.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++I+ ++ +L e + + l+ee+
CP001619_1 487 FKSEFLANMSHELRTPLNSILILSRILGE------NKGARLNEEE-- 525

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++i+++++ ll Lind+Ldl++ eag
CP001619_1 526 ----------QRYASVIYNSGNDLLTLINDILDLAKVEAG 555

CP001619_0389: domain 1 of 1, from 527 to 595: score 82.1, E = 9.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++I++++ lL e d +l++eq+
CP001619_0 527 YKSEFLANMSHELRTPLNSILLLSRLLAE------NDDKNLTSEQI- 566

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey +i+++++ ll Li+++Ldls+ieag
CP001619_0 567 -----------EYATVIQSSGNGLLGLIDEILDLSKIEAG 595

CP001619_3176: domain 1 of 1, from 355 to 418: score 78.9, E = 7.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++flan+sHE+RTPL +I+gyae+L++ e+ r
CP001619_3 355 AKQRFLANMSHEIRTPLQSIIGYAEALKN------------EEKPR- 388

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ let+++++e+ll L+n++Ld+sri +
CP001619_3 389 ----------KQDLETLHSASEHLLYLVNEVLDYSRIISD 418

CP001619_5488: domain 1 of 1, from 856 to 922: score 74.5, E = 1.3e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+efla+l+HELR+PL+ +r +++++++ t ++e +
CP001619_5 856 RKDEFLAMLAHELRNPLAPVRNTLQIMKM---------TSGDDERV- 892

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + r++++l rL++dlLd sri g
CP001619_5 893 ----------NASVAMMNRQVDHLVRLVDDLLDVSRISRG 922

CP001619_0378: domain 1 of 1, from 354 to 422: score 74.0, E = 1.8e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+an+sHEL+TP+++I+ +++lL++ + +e +eeq
CP001619_0 354 AKTNFIANVSHELKTPISSIKITLDLLRN------ERVGETNEEQ-- 392

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++++i+++a+rll++ +lL +++ e+g
CP001619_0 393 ----------RGLIDSIREDADRLLKITGELLNITQVESG 422

CP001619_2195: domain 1 of 1, from 722 to 788: score 72.0, E = 6.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+efla+l+HELR+PL+++r ++lL+ t +++ q+
CP001619_2 722 RKDEFLAMLAHELRNPLATVRNGISLLKV---------TRQNDAQM- 758

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ ++r+a +l r+i+dlLd sr +g
CP001619_2 759 ----------SDVVDMMDRQATHLVRMIDDLLDVSRVTQG 788

CP001619_1436: domain 1 of 2, from 348 to 416: score 66.5, E = 2.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+ n+sHE+RTPL ++g +e Ll+ + +e+se +
CP001619_1 348 AKTLFFTNISHEFRTPLMLMLGPLEELLR------LNAPEWSEAE-- 386

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +e+ +r a rll+L+n lLd+sr+e g
CP001619_1 387 ----------KAKVEVTHRNALRLLKLVNTLLDFSRMEGG 416

CP001619_5237: domain 1 of 1, from 193 to 261: score 66.0, E = 3.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+f+ +sHE+RTPL++I+ a+l+ +++ + +ee+r
CP001619_5 193 MKSQFVTIASHEFRTPLATILSSASLIGRYA-------RTEDEEKR- 231

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++i++ + l +++nd+L + ++e+g
CP001619_5 232 ----------QKHVQRIKSTVTNLTEILNDFLSIGKLEEG 261

CP001619_1577: domain 1 of 1, from 815 to 879: score 65.1, E = 5.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+f+an+sHE+RTPLt I++ +e l+ ++s+e
CP001619_1 815 IKSRFFANISHEFRTPLTLILAPLEEELN----------KKSPEA-- 849

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l ++r a+rll+L+n+lL ls++eag
CP001619_1 850 ----------QDKLLMMKRYANRLLELVNQLLSLSKLEAG 879

CP001619_3338: domain 1 of 1, from 119 to 186: score 64.6, E = 8.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++efla++sHE++TP+ a +g++++Ll+ ++++++ ++
CP001619_3 119 FRREFLADVSHEFKTPIFAAQGFIHTLLD---------GAMDDDNVR 156

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+++ + +++l+ L+ dlL ls++e+g
CP001619_3 157 ----------ERFLRKAANNLDSLDVLVKDLLVLSQMETG 186

CP001619_2703: domain 1 of 1, from 233 to 299: score 63.8, E = 1.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ f++++sHELRTPL+ I+ ael l+ e+s+ +
CP001619_2 233 AQKNFVSHASHELRTPLALIMSEAELSLM---------KERSPAE-- 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+++l+ i +ea+ +++L+n+lL+l+r e+
CP001619_2 269 ---------YQDALKGIWSEAKEMNELVNRLLELARTEEK 299

CP001619_1722: domain 1 of 1, from 846 to 912: score 62.2, E = 3.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f++n+ HE+RTPLt I+ ++ Ll +++ s +
CP001619_1 846 LKDRFFSNITHEFRTPLTLIISPLQKLLS--------EGAVSGPI-- 882

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+ i++ +++ll L+n++Ld+s++ g
CP001619_1 883 ----------RQTLRGIEKNSRQLLGLVNEFLDFSKLNDG 912

CP001619_0551: domain 1 of 1, from 825 to 891: score 59.3, E = 2.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +f+ n++HE+RTPLt I++ ++ Ll+ + + ++e++
CP001619_0 825 AKIDFFTNVAHEIRTPLTLIKMPLDKLLA--------SRKSDPETI- 862

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ i++ + rl +L n+lLd+ ++ea+
CP001619_0 863 -----------ESLNMIDKNTSRLIDLTNQLLDFRKAEAN 891

CP001619_1545: domain 1 of 1, from 863 to 929: score 59.2, E = 2.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ n+sHE+RTPLt +++ +e Ll+ + + ++
CP001619_1 863 MKIRFFTNVSHEFRTPLTLMLTPLENLLT---------NIRADNTV- 899

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ ++r a+rll+L+ ++Ld+ ++e +
CP001619_1 900 ----------HRQLSLVHRNARRLLNLVTQMLDFKKLEVE 929

CP001619_1574: domain 1 of 1, from 396 to 462: score 55.9, E = 2.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ n+sHE+RTPLt I+g +e Ll+ ++ ++ +
CP001619_1 396 SKFRFFTNISHEFRTPLTLILGPVEELLR---------QKNESPAV- 432

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+ +++ a rll L+n+l+d+ +ie+g
CP001619_1 433 ----------RKNLSLVQKNATRLLWLVNQLMDFRKIESG 462

CP001619_0272: domain 1 of 1, from 228 to 294: score 55.6, E = 2.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f++n+sHE+RTPLt+++g ael + +e +
CP001619_0 228 MQNNFVSNASHEFRTPLTVVSGEAELGMS---------MPGLPESV- 264

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e + i++e+e l++L n +L l++ +
CP001619_0 265 ----------KESFLNIYKEVEKLEHLTNSMLSLAQTGFD 294

CP001619_4024: domain 1 of 1, from 377 to 449: score 54.5, E = 6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+ HE++TP+++I ++ae+++e ++ +++
CP001619_4 377 IKNDFINNMTHEFKTPISTIALAAEMAQE---------NSATLMDNP 414

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +Rl +yl +i++e +rl ++ +L+++ ++ g
CP001619_4 415 KGARL-----DRYLGIIREENRRLGTHVEKVLQMALLDKG 449

CP001619_2264: domain 1 of 1, from 801 to 866: score 54.1, E = 7.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+ H++RTPLt I+ + L +++ ++ +e ++
CP001619_2 801 LKERFFTNVTHDFRTPLTLILSPLAPLIRKYA------GTEDEGKM- 840

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+i+r a++ll+Lin+lLd+s+++a
CP001619_2 841 --------------LSIQRNAQQLLALINQLLDFSKLDAK 866

CP001619_2690: domain 1 of 1, from 262 to 327: score 51.0, E = 5.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++l+HE R+PLt + + ae L++ el +e++
CP001619_2 262 VTGRLVRMLAHEVRNPLTNVNLSAEQLEM----------ELADEDQ- 297

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y+++i+r r+++Li +lL+ s e
CP001619_2 298 ----------KFYTQIIKRNCTRINDLITQLLQPSTSEDI 327

CP001619_1776: domain 1 of 1, from 231 to 297: score 50.8, E = 6.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f++++sHEL+ PL+aI g++e+Ll+ +++++
CP001619_1 231 IQKNFISHASHELKSPLAAIVGNLEVLLN---------KQRTAQE-- 266

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ + +l++aerl++++++lL l+ ++++
CP001619_1 267 ---------YESVSRNVLNDAERLEKILQNLLLLAGLGQP 297

CP001619_3097: domain 1 of 1, from 199 to 265: score 49.7, E = 1.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ n+sHE+ TPL+ I + +e +++l+e +
CP001619_3 199 SLREFTENASHEIQTPLALINARVEQFIQ--------SGDLGENH-- 235

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e i+++a+r++rL + lL l++ie++
CP001619_3 236 ----------TYWIEEIYHAARRMSRLNQGLLLLAKIENQ 265

CP001619_2686: domain 1 of 1, from 232 to 298: score 48.8, E = 2.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f++++sHELRTPL+a++ ++l ++ + ++e
CP001619_2 232 QQKSFVSHASHELRTPLAALKSEIQLGQR--------FNKNNPEI-- 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e + + +++erl ++ n+lL l+r ++
CP001619_2 269 ----------EEVFANLFSDTERLISITNNLLFLARSYEN 298

CP001619_0448: domain 1 of 1, from 237 to 303: score 48.4, E = 3.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+an+sHEL++PLt I+ +e+ e+++ +
CP001619_0 237 MQKIFVANVSHELKNPLTKIKSQLEVSML---------KERNPYE-- 272

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ ++++l++++ l +L n lL+l++ +
CP001619_0 273 ---------YQMTIRSVLEDIQELGQLSNTLLELAKVSED 303

CP001619_3500: domain 1 of 1, from 196 to 264: score 48.2, E = 3.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ n+ HEL TP+++Ir +a++L + d ++r
CP001619_3 196 VQRDFVNNMTHELQTPISTIRIAADVLNT--------DNIVAQPTRH 234

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++++++e+ rl+ +++ +L ++++e +
CP001619_3 235 ----------KRYVQIVQDEILRLQGQVEMVLSMAKAERN 264

CP001619_0799: domain 1 of 2, from 818 to 884: score 47.5, E = 5.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+sHELRTP++ I+ ++ + ++ ++l++e
CP001619_0 818 TKEQFFTNISHELRTPISLILPPIHQIMKN--------GKLNAEN-- 854

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +++ ++rllr +n++Ld+ ++++
CP001619_0 855 ----------FKLISLAEKNSHRLLRVVNQVLDFKKMQSD 884

CP001619_0390: domain 1 of 1, from 289 to 356: score 45.8, E = 1.7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L+ PL I+++++l+++++ + ++e +
CP001619_0 289 ELQQFAWVVSHDLKEPLRKIQTFSHLIKDKY-------LTGNDEAI- 327

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl++ ++++ r++rLi+dlLd+sr+
CP001619_0 328 -----------SYLNRSISSSARMSRLISDLLDYSRLSVT 356

CP001619_0291: domain 1 of 1, from 564 to 632: score 45.6, E = 1.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ ++sH++ PL I+ + + Ll + +++l++
CP001619_0 564 NLQQFAYAASHDMQEPLRKIQSFGSRLLSTY------SDKLDDNG-- 602

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l++i+++++r++++i+dlL +sr+ +
CP001619_0 603 ----------KYMLNRIQDASKRMSAMIDDLLAYSRLTTR 632

CP001619_5271: domain 1 of 1, from 243 to 311: score 45.1, E = 2.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+ HEL+TP+++++++++++l ++ + +++ ++
CP001619_5 243 IKNDFINNMTHELKTPIATVSAAVDAMLHFG-------ALKDPRKA- 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl++ ++ ++rl++L++ +L l+ e +
CP001619_5 282 ----------EEYLHVSQNNLQRLSDLVEKVLNLAVDEKQ 311

CP001619_1462: domain 1 of 1, from 862 to 927: score 44.9, E = 3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k f+ n+sHE+RTPLt I+ + + ++ + +
CP001619_1 862 RKFSFFTNVSHEFRTPLTLIINPIREMMQ---------AAGADAT-- 897

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++i+r a+rll+L+++lL + +++++
CP001619_1 898 ----------SPSMHIIYRNAKRLLSLVDQLLLFRKADQQ 927

CP001619_1896: domain 1 of 1, from 763 to 829: score 44.3, E = 4.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +f+ n+sHE+RT L+ I++ +e + +++ + +
CP001619_1 763 IKLDFFTNVSHEIRTHLSLISAPLEKAFQ---------HAKEGKSN- 799

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ +++ ++rll L+n+lLd+ +i++g
CP001619_1 800 ----------ESFLNYAKSNSDRLLLLVNELLDFRKIQSG 829

CP001619_0335: domain 1 of 1, from 325 to 392: score 43.5, E = 7.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ +sH+L P+ + ++a+lL+ l +e +e q
CP001619_0 325 ELAQFAYIASHDLQEPIRKVATFAQLLEGAL-------GETTERQ-- 362

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl++i++++ r+ Li+d+L++s++
CP001619_0 363 ----------RNYLDKIKNASARMMLLIRDVLTFSQLSRD 392

CP001619_0342: domain 1 of 1, from 222 to 288: score 42.4, E = 1.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+++++ ++H+LR PL++I+ ++elL ++l eeq+
CP001619_0 222 EKNKLMSIVAHDLRSPLASIQNFLELLTQ---------HDLEEEQK- 258

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +l++++ ++++ lLd s+ +
CP001619_0 259 ----------IDIENDLLNSTKNTMAMLSKLLDWSKSQLH 288

CP001619_5355: domain 1 of 1, from 173 to 239: score 41.6, E = 2.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ l+ sH+LR L + + +a+lL+ ++lse +r
CP001619_5 173 ERGDILRKSSHDLRGSLGVASSAAHLLQL---------DHLSESDR- 209

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ + r + + ++n+lLdlsr+e+g
CP001619_5 210 ----------NKYLQMLTRNLGNVQTMLNELLDLSRLESG 239

CP001619_0779: domain 1 of 1, from 852 to 917: score 40.9, E = 4.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +fl nlsHE+RTP++ I++ ++ l+ ++ e
CP001619_0 852 LKIKFLTNLSHEFRTPIALILAPIDSVLT---------KTRETEL-- 887

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i+r a+rll+L++ lLd+ ++++
CP001619_0 888 ----------HAPVVAIKRNAKRLLNLVDHLLDFKNMQQQ 917

CP001619_1716: domain 1 of 1, from 317 to 384: score 40.2, E = 6.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ ++ H+L PL Ir ++ lL ++ ++++ +
CP001619_1 317 NLEQFAYAAGHDLQEPLRKIRQFSALLTS------HIPGAAGNDA-- 355

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y+e+i +a r++ LindlL++s i +g
CP001619_1 356 -----------RYIERINAAAGRMSTLINDLLEFSNITTG 384

CP001619_0528: domain 1 of 1, from 807 to 873: score 39.7, E = 9.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +f+ n+sHE+RT L+ I++ + + ++ + +++
CP001619_0 807 VKLDFFTNVSHEIRTHLSLISAPMQKAFQ---------HAYDGKTV- 843

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl ++++++rll L+n+lLd+ +i++g
CP001619_0 844 ----------EHYLGFAKNSSDRLLLLVNELLDFRKIQSG 873

CP001619_1436: domain 2 of 2, from 889 to 955: score 39.5, E = 1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f +sH+L PL I+++++l+++ + +++
CP001619_1 889 ELESFNYVASHDLQEPLRKIQTFIHLIER---------NDFDSDLS- 925

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y+++i+ +++r+ +Li+ +L +sr+ ++
CP001619_1 926 ----------KGYFKKIYLASQRMGELIQSVLSYSRLSEN 955

CP001619_5101: domain 1 of 1, from 65 to 130: score 39.3, E = 1.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e+l+++sH+LR + +I +++lL + + ++ +
CP001619_5 65 ERGELLRSASHDLRGQVGVIASATQLLGM----------AGNATDS- 100

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i+r + ++ +L ++lLd++r+e+g
CP001619_5 101 ----------NVLIQMIQRNIGQMTHLMSNLLDYARLESG 130

CP001619_5520: domain 1 of 1, from 176 to 242: score 38.6, E = 1.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l+ sH+LR +a++g+a lL + s+++r
CP001619_5 176 QRTHLLRESSHDLRGSFSALQGAAALLDM---------MVDSDDER- 212

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +le+++r + ++ L+ +l+dl+r+eag
CP001619_5 213 ----------KHILEILRRNLSNCRVLVTQLMDLARLEAG 242

CP001619_3261: domain 1 of 1, from 222 to 290: score 38.1, E = 2.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L+ PL aI ++e ++e+ +++ e ++
CP001619_3 222 ELDQFAYVVSHDLKAPLRAINNLSEWIEEDI-------ADMLEGET- 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ ++ ++r+++Lin +L +sr++
CP001619_3 261 ----------KDQFRLLRGRVHRMENLINGILSYSRAGRM 290

CP001619_1503: domain 1 of 1, from 423 to 491: score 37.6, E = 3.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a +sH+L+ P+ ++r +++l+ + + + ++ + +
CP001619_1 423 ELEQFTAIVSHDLKEPVRTVRSFLHLMDR-------HVDQQNYDNL- 461

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + + + +a+r+ +Li++lL +s+i
CP001619_1 462 ----------RLSIGKGILAAQRMHDLIDNLLHYSQISKV 491

CP001619_2457: domain 1 of 1, from 564 to 632: score 36.2, E = 9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ +sH+L PL I+++a +le + ++lse
CP001619_2 564 ELAQFAYVASHDLQEPLRKIQTFATRILE------TENDNLSERG-- 602

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+ +++ ++ r+++Li dlL +sr+
CP001619_2 603 ----------KDYFVRMQASSTRMQQLIVDLLAFSRANVA 632

CP001619_2337: domain 1 of 1, from 143 to 208: score 32.9, E = 7.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+LR PL +++g + l+l e + + +
CP001619_2 143 ELDKFVYSASHDLRAPLMSVLGIVNLALL----------EEDVKSQ- 178

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
eyle i+++++ l+ i ++ d+ + g
CP001619_2 179 ----------NEYLELIRQSVKKLDTFIINIIDYYKNARG 208

CP001619_1576: domain 1 of 1, from 492 to 553: score 28.1, E = 1.8e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ +l+ ++H+LR+P++a+ +++L d+ +eeq
CP001619_1 492 EKESLLRIVAHDLRNPIAAMVSGSDMLFW--------DQVPTEEQ-- 528

peLRledpeyreyletilreaerllrLindlLdls<-*
+ +++ i+++++ Li ++L+ s
CP001619_1 529 ----------AMIIDAIQQSGQLAFGLIGQILQSS 553

CP001619_1065: domain 1 of 1, from 175 to 243: score 27.3, E = 3.1e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++ ++H++R PL +I g+a++++++++ +++ +e
CP001619_1 175 EARQTQKKVAHDIRGPLGGIVGLAQIIRDQGE------ENRMDEV-- 213

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++ i+++++++l+L +++L+ + a
CP001619_1 214 ----------LEFINLIHKSGNSILDLAEEILESHKDKAK 243

CP001619_0879: domain 1 of 1, from 256 to 324: score 27.1, E = 3.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L PL I ++ lL + ++++ls++
CP001619_0 256 ELQDFAYVASHDLQEPLRKITALGTLLVN------RHSHALSPDG-- 294

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++ +++r++ Li+dlL ls+ +
CP001619_0 295 ----------TNLVIRMQAASNRMNILIEDLLHLSQVSSV 324


Histogram of all scores:
score obs exp (one = represents 20 sequences)
----- --- ---
-15 1 0|=
-14 17 0|=
-13 69 4|*===
-12 256 130|======*======
-11 573 677|============================= *
-10 1042 1257|===================================================== *
-9 1158 1298|==========================================================*
-8 954 972|================================================*
-7 684 612|==============================*====
-6 383 352|=================*==
-5 237 193|=========*==
-4 126 103|=====*=
-3 64 54|==*=
-2 41 28|=*=
-1 22 14|*=
0 8 7|*
1 6 4|*
2 3 2|*
3 2 1|*
4 2 0|=
5 1 0|=
6 1 0|=
7 1 0|=
8 0 0|
9 0 0|
10 1 0|=
11 3 0|=
12 1 0|=
13 1 0|=
14 1 0|=
15 0 0|
16 0 0|
17 1 0|=
18 0 0|
19 3 0|=
20 0 0|
21 1 0|=
22 1 0|=
23 1 0|=
24 1 0|=
25 0 0|
26 0 0|
27 2 0|=
> 28 51 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 224.5836
P(chi-square) = 5.03e-311

Total sequences searched: 5719

Whole sequence top hits:
tophits_s report:
Total hits: 53
Satisfying E cutoff: 53
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 54
Satisfying E cutoff: 54
Total memory: 42K


Acknowledgements:

This research is funded by:

Developed by: