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Thermotogae
Classification of phyla is from NCBI page
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132 projects found  

6 accessions found for Rhizobium leguminosarum bv. trifolii WSM1325  

Data for CP001622  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001622.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001622_1061 CDS_1056845-1054536 98.6 1.5e-27 1
CP001622_3101 CDS_3157906-3154511 96.1 7.7e-27 1
CP001622_2279 CDS_2319825-2321360 93.6 3.9e-26 1
CP001622_0993 CDS_993812-995323 85.8 6.3e-24 1
CP001622_0050 CDS_53606-51324 85.4 8.5e-24 1
CP001622_0176 CDS_174871-176094 81.0 1.5e-22 1
CP001622_3255 CDS_3322985-3326371 77.5 1.4e-21 1
CP001622_4218 CDS_4399816-4397231 72.3 4.1e-20 1
CP001622_0412 CDS_432634-428804 70.8 1.2e-19 1
CP001622_4223 CDS_4404652-4402862 68.3 5.8e-19 1
CP001622_0611 CDS_655511-654372 65.2 4.5e-18 1
CP001622_1457 CDS_1462354-1460819 58.5 3.4e-16 1
CP001622_1784 CDS_1802310-1803464 54.7 4.2e-15 1
CP001622_2926 CDS_2975331-2977199 52.6 1.6e-14 1
CP001622_0315 CDS_327532-325391 52.0 2.4e-14 1
CP001622_0754 CDS_789176-787746 49.5 1.2e-13 1
CP001622_2618 CDS_2657634-2655874 48.6 2.3e-13 1
CP001622_1540 CDS_1542891-1548359 48.4 2.4e-13 1
CP001622_1789 CDS_1807627-1809897 47.2 5.4e-13 1
CP001622_0313 CDS_324974-323379 45.6 1.6e-12 1
CP001622_0251 CDS_266007-262483 44.2 3.8e-12 1
CP001622_1058 CDS_1049170-1050579 43.6 5.9e-12 1
CP001622_4246 CDS_4424940-4423612 41.8 1.9e-11 1
CP001622_3575 CDS_3680310-3681692 41.4 2.4e-11 1
CP001622_0319 CDS_330476-329760 40.7 3.8e-11 1
CP001622_2231 CDS_2273697-2271532 35.9 8.6e-10 1
CP001622_2474 CDS_2521618-2520266 35.7 1e-09 1
CP001622_3395 CDS_3495284-3493482 33.0 5.8e-09 1
CP001622_2238 CDS_2280679-2279357 32.5 8e-09 1
CP001622_2956 CDS_3008960-3007584 31.0 2.1e-08 1
CP001622_1270 CDS_1267816-1269537 30.8 2.4e-08 1
CP001622_1521 CDS_1523511-1525850 28.7 9.7e-08 1
CP001622_3661 CDS_3784965-3783589 27.8 1.8e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001622_1061 1/1 543 612 .. 1 87 [] 98.6 1.5e-27
CP001622_3101 1/1 596 661 .. 1 87 [] 96.1 7.7e-27
CP001622_2279 1/1 261 330 .. 1 87 [] 93.6 3.9e-26
CP001622_0993 1/1 231 300 .. 1 87 [] 85.8 6.3e-24
CP001622_0050 1/1 243 308 .. 1 87 [] 85.4 8.5e-24
CP001622_0176 1/1 185 252 .. 1 87 [] 81.0 1.5e-22
CP001622_3255 1/1 676 742 .. 1 87 [] 77.5 1.4e-21
CP001622_4218 1/1 629 697 .. 1 87 [] 72.3 4.1e-20
CP001622_0412 1/1 1043 1112 .. 1 87 [] 70.8 1.2e-19
CP001622_4223 1/1 358 423 .. 1 87 [] 68.3 5.8e-19
CP001622_0611 1/1 162 227 .. 1 87 [] 65.2 4.5e-18
CP001622_1457 1/1 278 346 .. 1 87 [] 58.5 3.4e-16
CP001622_1784 1/1 141 205 .. 1 87 [] 54.7 4.2e-15
CP001622_2926 1/1 405 473 .. 1 87 [] 52.6 1.6e-14
CP001622_0315 1/1 477 545 .. 1 87 [] 52.0 2.4e-14
CP001622_0754 1/1 242 308 .. 1 87 [] 49.5 1.2e-13
CP001622_2618 1/1 355 423 .. 1 87 [] 48.6 2.3e-13
CP001622_1540 1/1 1598 1668 .. 1 87 [] 48.4 2.4e-13
CP001622_1789 1/1 507 579 .. 1 87 [] 47.2 5.4e-13
CP001622_0313 1/1 139 205 .. 1 87 [] 45.6 1.6e-12
CP001622_0251 1/1 808 873 .. 1 87 [] 44.2 3.8e-12
CP001622_1058 1/1 240 305 .. 1 87 [] 43.6 5.9e-12
CP001622_4246 1/1 218 284 .. 1 87 [] 41.8 1.9e-11
CP001622_3575 1/1 238 303 .. 1 87 [] 41.4 2.4e-11
CP001622_0319 1/1 20 88 .. 1 87 [] 40.7 3.8e-11
CP001622_2231 1/1 325 391 .. 1 87 [] 35.9 8.6e-10
CP001622_2474 1/1 243 301 .. 1 87 [] 35.7 1e-09
CP001622_3395 1/1 372 440 .. 1 87 [] 33.0 5.8e-09
CP001622_2238 1/1 235 293 .. 1 87 [] 32.5 8e-09
CP001622_2956 1/1 255 313 .. 1 87 [] 31.0 2.1e-08
CP001622_1270 1/1 192 260 .. 1 87 [] 30.8 2.4e-08
CP001622_1521 1/1 549 619 .. 1 87 [] 28.7 9.7e-08
CP001622_3661 1/1 233 291 .. 1 87 [] 27.8 1.8e-07

Alignments of top-scoring domains:
CP001622_1061: domain 1 of 1, from 543 to 612: score 98.6, E = 1.5e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL+aI+g++e+L+++++ ++l++ +
CP001622_1 543 AKSEFLANMSHELRTPLNAILGFSEILQNQMF------GPLGSLK-- 581

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y ey + i++++++ll+ ind+Ld+s+ieag
CP001622_1 582 ---------YDEYARDIHDSGKHLLNVINDILDMSKIEAG 612

CP001622_3101: domain 1 of 1, from 596 to 661: score 96.1, E = 7.7e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP+++++g+aelL + t+l+ q
CP001622_3 596 AKSEFLANMSHEIRTPMNGVLGMAELLAK---------TNLDTRQ-- 631

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++++i ++++ ll +ind+Ld+s+i+ag
CP001622_3 632 ----------KTFVDIIVKSGNALLTIINDILDFSKIDAG 661

CP001622_2279: domain 1 of 1, from 261 to 330: score 93.6, E = 3.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL+aI+g++e++ +e+ ++l ++
CP001622_2 261 AKSRFLASMSHELRTPLNAILGFSEVMSAEVM------GPLANPT-- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ey i+r++++ll+Lin++Ldlsrieag
CP001622_2 300 ---------YKEYAGDIHRSGQHLLDLINEILDLSRIEAG 330

CP001622_0993: domain 1 of 1, from 231 to 300: score 85.8, E = 6.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL+aI+g++++L e++ ++ + +
CP001622_0 231 AKSRFLAAVSHELRTPLNAILGFSDILIGEYF------GKFENDRQ- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey+ +++++ +ll+ +n +Ld+s+ieag
CP001622_0 271 ----------REYVGLVRESGAHLLSVVNTMLDMSKIEAG 300

CP001622_0050: domain 1 of 1, from 243 to 308: score 85.4, E = 8.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks++la++sHE RTPL++I+g+++l+ e t l+ eq
CP001622_0 243 AKSRLLATVSHEVRTPLSGILGMTHLIAE---------TRLTQEQ-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl i+++++ l +L++dlLd+s ie g
CP001622_0 279 ----------QNYLANIRQSGHALTQLVEDLLDFSTIEVG 308

CP001622_0176: domain 1 of 1, from 185 to 252: score 81.0, E = 1.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f+an+sHELRTPL+++rg++e+++ +++++ +++
CP001622_0 185 MRSDFVANASHELRTPLASLRGFIETIQG---------PAKNDLKAQ 222

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+++l++a r++rL++dlL lsr+e
CP001622_0 223 ----------TRFLNIMLDQATRMSRLVDDLLSLSRLELK 252

CP001622_3255: domain 1 of 1, from 676 to 742: score 77.5, E = 1.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ + +lsHELRTPL+a++gya++L++ d++ +++
CP001622_3 676 AKSRYVVGLSHELRTPLNAVLGYAQILER--------DETIPAPR-- 712

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++i+r+ae+l+ Li+ lLd+s+ieag
CP001622_3 713 ----------QSSIKVIRRSAEHLSGLIDGLLDISKIEAG 742

CP001622_4218: domain 1 of 1, from 629 to 697: score 72.3, E = 4.1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ ++s ELR PLt I+g+++lL++ +g ++l+e q
CP001622_4 629 LKNDFVQHVSYELRSPLTNIIGFTDLLRT------PGVGPLTERQ-- 667

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey++ i ++ ll L+nd+Ldl+ +ag
CP001622_4 668 ----------AEYIDHISTSSSVLLTLVNDILDLATVDAG 697

CP001622_0412: domain 1 of 1, from 1043 to 1112: score 70.8, E = 1.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++fla +sHE+RTPL+aI+g+++++ + ++ + +
CP001622_0 1043 HKTDFLARVSHEIRTPLNAIIGFSDMMAG------ERFGPIGHPR-- 1081

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y ey + i r++++ l+++ndlLd+s+ieag
CP001622_0 1082 ---------YIEYANDIGRSGRHVLDIVNDLLDISKIEAG 1112

CP001622_4223: domain 1 of 1, from 358 to 423: score 68.3, E = 5.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f+a++sHEL++PLt++r ++e+L ++ ++ +
CP001622_4 358 SIESFAADVSHELKNPLTSLRSAVETLPL---------AKSDDSK-- 393

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++i+++++rl+rLi+d+ d sr++a+
CP001622_4 394 ----------KRLMDVIQHDVRRLDRLISDISDASRLDAE 423

CP001622_0611: domain 1 of 1, from 162 to 227: score 65.2, E = 4.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ef+a l H+LR+PL++I ++a +L++ +++++ +
CP001622_0 162 LREEFIAVLGHDLRNPLASIAAAARMLRK---------EKQTDRAI- 198

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ ++ ++ r+++Li+++Ld++r + g
CP001622_0 199 -----------KVLDLMQGSVVRMSALIDNVLDFARGRLG 227

CP001622_1457: domain 1 of 1, from 278 to 346: score 58.5, E = 3.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHE+RTPL+ I ++a+ Ll+ ++++ +e +
CP001622_1 278 LQRQFVAMASHEFRTPLAIIDAAAQRLLR-------KRGAVEPEFL- 316

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ i+ ++ r+ +L + +L r+++g
CP001622_1 317 ----------SDKVDQIRASVTRIVDLMESILSAGRLDTG 346

CP001622_1784: domain 1 of 1, from 141 to 205: score 54.7, E = 4.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++++l+HE+++PL++Irg+a+lL+ +++++
CP001622_1 141 SVTGLASMLAHEIKNPLSGIRGAAQLLEQ----------SADDDD-- 175

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++ i +e++r+ +L++++ +s +
CP001622_1 176 ----------RALTRLICDETDRIVSLVDRMEVFSDERPV 205

CP001622_2926: domain 1 of 1, from 405 to 473: score 52.6, E = 1.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a+++HE+++P+++Ir+ya+ ++++ld ++++
CP001622_2 405 ILGQVAAGVAHEINQPVATIRAYADNARTFLD------RGQTAPA-- 443

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e le+i +er+ ++ ++l +++r + g
CP001622_2 444 ----------GENLESIAALTERIGSITEELKTFARKGRG 473

CP001622_0315: domain 1 of 1, from 477 to 545: score 52.0, E = 2.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ef+ +sH+L+ PL ++ ++ Lle+++ ++l+++
CP001622_0 477 DLDEFAYIASHDLKEPLRGLHNHSRFLLEDYE------DKLDADG-- 515

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+++ r ++r+++L+n+lL +sr++ +
CP001622_0 516 ----------VRRLNRLVRLSQRMEKLVNELLYFSRLGRQ 545

CP001622_0754: domain 1 of 1, from 242 to 308: score 49.5, E = 1.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ a+++H+L+TPL+ +r++++++ + ++ ++
CP001622_0 242 SMRQVSADIAHDLKTPLNRLRLTLDAAVA---------GNDQQADV- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+ +++e++r+++ + lL +s+ieag
CP001622_0 279 ----------SALLDEARHESDRINATFEALLRISQIEAG 308

CP001622_2618: domain 1 of 1, from 355 to 423: score 48.6, E = 2.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHE+RTPL+ I ++a+ L + + t+ s + +
CP001622_2 355 LQRQFVAMASHEFRTPLAIIDAAAQRLCR-------STTNVSGDYV- 393

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +i++++ r+ +L + +L r+e+g
CP001622_2 394 ----------HEKAGVIRSAVVRMVDLMESILASGRLETG 423

CP001622_1540: domain 1 of 1, from 1598 to 1668: score 48.4, E = 2.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++a+++HE ++PL aI ++a ++l++l +d+ l+ ++
CP001622_1 1598 ALGELTASIAHEVNQPLMAIVTNAATCLRWL-----SDDLLDVREA- 1638

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ e+i+r+++r + i ++ ++r
CP001622_1 1639 ----------REAAERIIRDGHRAGDVITSIRAMARKSPL 1668

CP001622_1789: domain 1 of 1, from 507 to 579: score 47.2, E = 5.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ ++ ++HE+++PLt I++ ae +++++ ++ + ++ ++
CP001622_1 507 AWGDVARRIAHEIKNPLTPIQLSAERIQRRY----GKQIDPDDRTV- 548

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++ti+r++ + r+++++ ++r+ +
CP001622_1 549 ---------FDQCTDTIIRQVGDIGRMVDEFSAFARMPKP 579

CP001622_0313: domain 1 of 1, from 139 to 205: score 45.6, E = 1.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+++++H+L+ PL +I+ ++ +L +++l++e+
CP001622_0 139 SLEIFTRAMAHDLKEPLRTIKSFTRILHG--------SAALPAED-- 175

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l+ +l++a+++++Li + ++++ea
CP001622_0 176 ----------RELLDYVLSAADHMEDLIVKVSGFTKLEAS 205

CP001622_0251: domain 1 of 1, from 808 to 873: score 44.2, E = 3.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a++ H++ +PL+a r+y+++L e + +e
CP001622_0 808 GKTRFFAAAGHDILQPLNAARLYSSALVE---------RMAQSEN-- 843

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i++++e+ + ++ +Ld+sr+++g
CP001622_0 844 ----------SLIVRNIDSALESVETILGAVLDISRLDTG 873

CP001622_1058: domain 1 of 1, from 240 to 305: score 43.6, E = 5.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ n++H+L+TPLt +r a +l+ ++ e+r
CP001622_1 240 GLRQVSDNIAHDLKTPLTRLRNKAADALD----------IADGETR- 275

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +le i++e+++l r n lL +sr eag
CP001622_1 276 ----------RTALEGIISESDQLIRTFNALLMISRVEAG 305

CP001622_4246: domain 1 of 1, from 218 to 284: score 41.8, E = 1.9e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+++HEL TPL++I+ a+ +++ el +++r
CP001622_4 218 QLDGLAAAAAHELGTPLATISVVAKEMER----------ELKDDDR- 253

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+re + +++++er+++++++l +ls ++
CP001622_4 254 ---------FREDVMLLRSQSERCRDILRRLTTLSSEGEA 284

CP001622_3575: domain 1 of 1, from 238 to 303: score 41.4, E = 2.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+ n+sH+LRTPL+ Ir+ + l + + s +++
CP001622_3 238 ALRHFTGNASHQLRTPLAIIRTQLALSAR----------AGSLDEA- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + ++++ + +r+i +lL +++i+a
CP001622_3 274 ----------QAAALKGDQAVAHAERIIAQLLLMAKIDAA 303

CP001622_0319: domain 1 of 1, from 20 to 88: score 40.7, E = 3.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +fla++sH+L PL I +yaelLl++l+ ++l+ eq
CP001622_0 20 RIKRFLATASHDLQSPLRHIAMYAELLLDDLE------ETLDGEQ-- 58

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ i + a+ +rL l+ l+ +
CP001622_0 59 ----------LQSLRMIMEKAQTAQRLTKALMSLAAGTPQ 88

CP001622_2231: domain 1 of 1, from 325 to 391: score 35.9, E = 8.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L +++g++elL + + ++ ++
CP001622_2 325 AIGQLTGGVAHDFNNLLMVVLGNLELLGK---------HVGGDAKA- 361

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +++ a+r +L ++lL ++r +
CP001622_2 362 ----------TRLVDGAIQGARRGAALTQRLLAFARQQDL 391

CP001622_2474: domain 1 of 1, from 243 to 301: score 35.7, E = 1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++fl +++HELRTP++ +++ ++ + +
CP001622_2 243 KRQRFLLDAAHELRTPIAIMQTRIDGMPD------------------ 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++l+++ rl + ++lLd++r ++
CP001622_2 272 ----------GRERQRLLDDVARLGQAAEQLLDFERNDQA 301

CP001622_3395: domain 1 of 1, from 372 to 440: score 33.0, E = 5.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ a+lsHE+++PL+a ++y++ + ++d ++ee
CP001622_3 372 GLGQMSAALSHEFNQPLAAAKTYTDSASV------LIDRGRTEEA-- 410

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +++i ++r+ ++ + l+ ++r ++
CP001622_3 411 ----------RDNIRRIGGLIDRMAAISRHLRNFARKPNE 440

CP001622_2238: domain 1 of 1, from 235 to 293: score 32.5, E = 8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + la++sH+L TP+t +r+ a+++++
CP001622_2 235 ERVQILAAISHDLQTPITRMRLRADMAED------------------ 263

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +++ ++rL++d ++r +g
CP001622_2 264 ----------SPDKDKLVHDLGEIQRLVQDGIAYARSAHG 293

CP001622_2956: domain 1 of 1, from 255 to 313: score 31.0, E = 2.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l+++sH+LRT Lt ++ + l+ +
CP001622_2 255 QRTAMLSGVSHDLRTILTRFKLQLALAGD------------------ 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ + ++++ ++ +++ + ++r e +
CP001622_2 284 ----------NPDLHGLNDDVNDMQTMLEAYMAFARGEVE 313

CP001622_1270: domain 1 of 1, from 192 to 260: score 30.8, E = 2.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++H++++ L+ I+g+++l+++ + + se+ rl
CP001622_1 192 TIGQLTGGVAHDFNNMLAIIIGNLDLAQR--------RLTGSEDPRL 230

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p+ ++ +++ a+r L +lL +sr +
CP001622_1 231 PYS----------IQNARDGAQRAAVLTARLLAFSRQQPL 260

CP001622_1521: domain 1 of 1, from 549 to 619: score 28.7, E = 9.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ + +++HE+++PL aI ++a ++l +ld+ +e +l
CP001622_1 549 AMGAVTVSIAHEMNQPLMAIVTNAATCLSWLDR---------PEPVL 586

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ + + e+i ++++r + + +++ ++r +
CP001622_1 587 DEA-------KVAAERIVKDGKRAGDVLLNVRNMARNSRP 619

CP001622_3661: domain 1 of 1, from 233 to 291: score 27.8, E = 1.8e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++l+++ H+LRTPLt +r+ ae e
CP001622_3 233 DRTRMLSGVGHDLRTPLTRLRMRAERSGE------------------ 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ +l ++ l+ +i++ L + + +
CP001622_3 262 ----------PELRGLMLADIATLSFMIDECLAYFKDAST 291


Histogram of all scores:
score obs exp (one = represents 16 sequences)
----- --- ---
-15 2 0|=
-14 16 0|=
-13 67 3|*====
-12 201 104|======*======
-11 458 541|============================= *
-10 779 1003|================================================= *
-9 935 1036|==========================================================*
-8 795 776|================================================*=
-7 527 489|==============================*==
-6 332 281|=================*===
-5 193 154|=========*===
-4 95 82|=====*
-3 61 43|==*=
-2 23 22|=*
-1 21 11|*=
0 13 6|*
1 5 3|*
2 2 1|*
3 1 0|=
> 4 39 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 207.5942
P(chi-square) = 8.8e-38

Total sequences searched: 4565

Whole sequence top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 34K


Acknowledgements:

This research is funded by:

Developed by: