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Thermotogae
Classification of phyla is from NCBI page
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106 projects found  

1 accessions found for Actinosynnema mirum DSM 43827  

Data for CP001630  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001630.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001630_2336 CDS_2628647-2632948 101.1 4.3e-28 1
CP001630_4939 CDS_6067224-6071663 87.2 3.8e-24 1
CP001630_1697 CDS_1887908-1886424 81.6 1.5e-22 1
CP001630_2278 CDS_2570450-2568801 80.9 2.4e-22 1
CP001630_2332 CDS_2624204-2622036 75.3 9.1e-21 1
CP001630_2177 CDS_2445030-2443831 74.0 2.2e-20 1
CP001630_3847 CDS_4637853-4633741 71.6 9.9e-20 1
CP001630_0371 CDS_415284-413875 70.9 1.7e-19 1
CP001630_4786 CDS_5885573-5887120 69.0 5.6e-19 1
CP001630_4018 CDS_4868119-4866773 68.0 1.1e-18 1
CP001630_3649 CDS_4399127-4397277 67.7 1.3e-18 1
CP001630_1504 CDS_1685125-1686156 66.9 2.1e-18 1
CP001630_6040 CDS_7276424-7277455 65.3 6.1e-18 1
CP001630_6139 CDS_7401775-7399370 65.1 7.1e-18 1
CP001630_0832 CDS_927977-929347 64.8 8.6e-18 1
CP001630_3162 CDS_3763521-3760957 63.2 2.4e-17 1
CP001630_0742 CDS_832971-834254 61.9 5.8e-17 1
CP001630_6573 CDS_7884337-7883153 61.3 8.5e-17 1
CP001630_1423 CDS_1598710-1597325 60.0 2e-16 1
CP001630_2431 CDS_2734048-2735841 59.9 2.1e-16 1
CP001630_1929 CDS_2164726-2167434 58.7 4.6e-16 1
CP001630_0602 CDS_675410-676840 58.2 6.2e-16 1
CP001630_3950 CDS_4780200-4778416 53.1 1.7e-14 1
CP001630_5313 CDS_6498240-6499610 50.6 9.1e-14 1
CP001630_3926 CDS_4742888-4744243 49.0 2.5e-13 1
CP001630_2850 CDS_3340812-3342527 48.8 2.9e-13 1
CP001630_4882 CDS_5993160-5994656 47.9 5.4e-13 1
CP001630_4383 CDS_5355729-5354581 47.2 8.3e-13 1
CP001630_2858 CDS_3360892-3358541 41.7 3e-11 1
CP001630_4229 CDS_5122531-5123862 40.6 6.3e-11 1
CP001630_5537 CDS_6727599-6726232 39.9 9.5e-11 1
CP001630_2592 CDS_2964263-2962674 38.8 1.9e-10 1
CP001630_2121 CDS_2375988-2374618 36.7 8e-10 1
CP001630_2346 CDS_2640465-2642477 35.7 1.5e-09 1
CP001630_4855 CDS_5965722-5964442 28.2 2.1e-07 1
CP001630_6208 CDS_7473409-7474683 27.4 3.5e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001630_2336 1/1 706 771 .. 1 87 [] 101.1 4.3e-28
CP001630_4939 1/1 1087 1155 .. 1 87 [] 87.2 3.8e-24
CP001630_1697 1/1 273 340 .. 1 87 [] 81.6 1.5e-22
CP001630_2278 1/1 325 391 .. 1 87 [] 80.9 2.4e-22
CP001630_2332 1/1 491 558 .. 1 87 [] 75.3 9.1e-21
CP001630_2177 1/1 171 239 .. 1 87 [] 74.0 2.2e-20
CP001630_3847 1/1 327 391 .. 1 87 [] 71.6 9.9e-20
CP001630_0371 1/1 247 314 .. 1 87 [] 70.9 1.7e-19
CP001630_4786 1/1 270 333 .. 1 87 [] 69.0 5.6e-19
CP001630_4018 1/1 229 294 .. 1 87 [] 68.0 1.1e-18
CP001630_3649 1/1 225 293 .. 1 87 [] 67.7 1.3e-18
CP001630_1504 1/1 121 188 .. 1 87 [] 66.9 2.1e-18
CP001630_6040 1/1 124 188 .. 1 87 [] 65.3 6.1e-18
CP001630_6139 1/1 297 364 .. 1 87 [] 65.1 7.1e-18
CP001630_0832 1/1 204 269 .. 1 87 [] 64.8 8.6e-18
CP001630_3162 1/1 612 680 .. 1 87 [] 63.2 2.4e-17
CP001630_0742 1/1 211 276 .. 1 87 [] 61.9 5.8e-17
CP001630_6573 1/1 145 211 .. 1 87 [] 61.3 8.5e-17
CP001630_1423 1/1 244 308 .. 1 87 [] 60.0 2e-16
CP001630_2431 1/1 364 428 .. 1 87 [] 59.9 2.1e-16
CP001630_1929 1/1 646 714 .. 1 87 [] 58.7 4.6e-16
CP001630_0602 1/1 235 307 .. 1 87 [] 58.2 6.2e-16
CP001630_3950 1/1 370 434 .. 1 87 [] 53.1 1.7e-14
CP001630_5313 1/1 241 306 .. 1 87 [] 50.6 9.1e-14
CP001630_3926 1/1 234 301 .. 1 87 [] 49.0 2.5e-13
CP001630_2850 1/1 258 322 .. 1 87 [] 48.8 2.9e-13
CP001630_4882 1/1 272 340 .. 1 87 [] 47.9 5.4e-13
CP001630_4383 1/1 139 203 .. 1 87 [] 47.2 8.3e-13
CP001630_2858 1/1 552 620 .. 1 87 [] 41.7 3e-11
CP001630_4229 1/1 180 249 .. 1 87 [] 40.6 6.3e-11
CP001630_5537 1/1 239 304 .. 1 87 [] 39.9 9.5e-11
CP001630_2592 1/1 258 329 .. 1 87 [] 38.8 1.9e-10
CP001630_2121 1/1 233 297 .. 1 87 [] 36.7 8e-10
CP001630_2346 1/1 441 513 .. 1 87 [] 35.7 1.5e-09
CP001630_4855 1/1 217 268 .. 1 73 [. 28.2 2.1e-07
CP001630_6208 1/1 201 265 .. 1 87 [] 27.4 3.5e-07

Alignments of top-scoring domains:
CP001630_2336: domain 1 of 1, from 706 to 771: score 101.1, E = 4.3e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks f+an+sHE+RTPL++++g++elLl+ t+l+ q
CP001630_2 706 MKSAFVANMSHEIRTPLNGVIGLTELLLD---------TDLDCRQ-- 741

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y +t++++a+ ll+ ind+Ld+s+ieag
CP001630_2 742 ----------RDYAQTLQNSADALLAVINDILDFSKIEAG 771

CP001630_4939: domain 1 of 1, from 1087 to 1155: score 87.2, E = 3.8e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksef+an+sHELRTPL++++ +a+lL ++ld ++l+++q
CP001630_4 1087 YKSEFMANMSHELRTPLNSLLILAKLLTDNLD------GNLNPKQ-- 1125

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ +ti++++ ll+Li+d+Ldl++ e+g
CP001630_4 1126 ----------VEFARTIHSSGTDLLQLIDDILDLTKVESG 1155

CP001630_1697: domain 1 of 1, from 273 to 340: score 81.6, E = 1.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a++sHELRTPL+aIrgyael ++ +++ s+e
CP001630_1 273 RVRQFVADASHELRTPLAAIRGYAELTRR-------SREVVSPEI-- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++++ea r+ +L++dlL l+r++ag
CP001630_1 311 ----------AHAMGRVESEAVRMTSLVEDLLLLARLDAG 340

CP001630_2278: domain 1 of 1, from 325 to 391: score 80.9, E = 2.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a++sHELRTPLta++++ae++ ++l++e+
CP001630_2 325 VKGRFVATVSHELRTPLTAVLAFAEMMPG--------AGPLNAEH-- 361

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
le+i+r + rl rL++dlL lsr+e+
CP001630_2 362 ----------LAHLEVIRRNTARLVRLVDDLLLLSRLESH 391

CP001630_2332: domain 1 of 1, from 491 to 558: score 75.3, E = 9.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ef++++sHELRTPLt++ a lL+e ++e s +
CP001630_2 491 LRTEFVSSMSHELRTPLTVVASSAALLKE--------ESEDSGGVH- 528

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + i+r a rll+ ++dl dl+r+e g
CP001630_2 529 ----------GQLADAIERNASRLLSVVEDLVDLARLEGG 558

CP001630_2177: domain 1 of 1, from 171 to 239: score 74.0, E = 2.2e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a +sHELRTPLt++ g +elL ++ +e+ ++
CP001630_2 171 VKRDFTALVSHELRTPLTSVHGSLELLAS------GRFGEMQAQA-- 209

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e++ + ++rl rL nd+Ldlsr ++g
CP001630_2 210 ----------SRLVEIAVKNTDRLVRLANDVLDLSRVQSG 239

CP001630_3847: domain 1 of 1, from 327 to 391: score 71.6, E = 9.9e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+an+sHE+RTPLt I g ++ L++ +++ +
CP001630_3 327 AKTAFFANISHEFRTPLTLITGPLQELRA----------RAGPGE-- 361

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l++++r a rl rL+ lLd+srieag
CP001630_3 362 ----------RAELDVVHRNALRLGRLVTALLDFSRIEAG 391

CP001630_0371: domain 1 of 1, from 247 to 314: score 70.9, E = 1.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTPLt+Irgya+l + ++ +e+r
CP001630_0 247 RLRRFIADASHELRTPLTSIRGYADLFRY--------AAANAPEER- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ le+++ ea r++ L+++lL l+r+++
CP001630_0 285 ----------EAHLEKLRAEAARMSVLLEELLLLARLDSA 314

CP001630_4786: domain 1 of 1, from 270 to 333: score 69.0, E = 5.6e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++fl ++ HELRTP+t ++g++elL e ++ +r
CP001630_4 270 TQRRFLDDAGHELRTPITIVSGHLELLGE------------DPVER- 303

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ l+e++r++r++ndlL l+++e++
CP001630_4 304 ----------AEAVRLCLDELDRMNRMVNDLLLLAKAEQP 333

CP001630_4018: domain 1 of 1, from 229 to 294: score 68.0, E = 1.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++f+a++sH+LR PLta+r+ ++ + ls+e r+
CP001630_4 229 AKRDFVADVSHQLRSPLTALRLGLDNVHD-----------LSDEPRA 264

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l+ ++ e+ r++rL+ndlL l+r++a+
CP001630_4 265 ----------REALDGAIAEVVRMSRLVNDLLALARAQAE 294

CP001630_3649: domain 1 of 1, from 225 to 293: score 67.7, E = 1.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f +++sHELR P++++ g++ lL + +g+++l+eeq
CP001630_3 225 ARTRFWSTISHELRSPVNSVVGLTRLLAA------PGSDPLTEEQ-- 263

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ + + +++e ll+L+n+l+d +++e+g
CP001630_3 264 ----------RRQVTLVNQAGETLLALVNELMDTAKAESG 293

CP001630_1504: domain 1 of 1, from 121 to 188: score 66.9, E = 2.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHELRTPL++Ir+ +++ l d+++++e++
CP001630_1 121 SQRRFVANASHELRTPLSVIRTELDVTLS--------DPDADAEEL- 158

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ ++++++ r ++L++ lL l+r +
CP001630_1 159 ----------RRMAGVVRSAGLRAEQLVSALLLLARTDGI 188

CP001630_6040: domain 1 of 1, from 124 to 188: score 65.3, E = 6.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++an+sHELRTP+ta+++ +e +++ + +++ ++
CP001630_6 124 RRRELIANVSHELRTPITALQAVLENVVDGV-------EQADATTM- 162

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+t+l ++erl rL+ +lLdlsri+ag
CP001630_6 163 --------------RTALAQTERLGRLVAELLDLSRIDAG 188

CP001630_6139: domain 1 of 1, from 297 to 364: score 65.1, E = 7.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f++++sHELRTPLt++r++a++L + +++ ++
CP001630_6 297 LQRRFTSDVSHELRTPLTTVRMAADVLHA-------SREQFPAGL-- 334

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +e + +e++r ++L+ dlL++sr++ag
CP001630_6 335 ----------ARSTELLVDELDRFESLLGDLLEISRLDAG 364

CP001630_0832: domain 1 of 1, from 204 to 269: score 64.8, E = 8.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f+a+++HELRTP++++++ ae+L s+e+r
CP001630_0 204 RTKRFVADAAHELRTPIAGVQAVAEALVQ----------SSSAEER- 239

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + rea+r rL++dlL+l+ri+ag
CP001630_0 240 ----------EQFNLLLVREARRAGRLVDDLLQLARIDAG 269

CP001630_3162: domain 1 of 1, from 612 to 680: score 63.2, E = 2.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ l+++ H+LRTPLt+I++++ L++ +lsee++
CP001630_3 612 LRTAILSAVGHDLRTPLTSIKAAIGSLRD-------PALALSEEDT- 650

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+le ++ +a+rl Li++lLd sr+ +g
CP001630_3 651 ----------GELLEAVEVSADRLAGLIDNLLDSSRLATG 680

CP001630_0742: domain 1 of 1, from 211 to 276: score 61.9, E = 5.8e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +++HELR P+t++r+ ae++ + ++ ++
CP001630_0 211 RLRRFTGDAAHELRSPVTSVRAQAEVAVA---------HPDPDFS-- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e le++ +e++r+++L++ lL l+r+++g
CP001630_0 247 ----------LEVLESVVEESQRMSALVDALLILARADSG 276

CP001630_6573: domain 1 of 1, from 145 to 211: score 61.3, E = 8.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHEL+TP+ a+ ++ae+ l+ ++ + e++
CP001630_6 145 TRRDFVANVSHELKTPVGALALLAEAVLD---------AADDREEV- 181

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ +i +ea rl +L+ +l lsr++
CP001630_6 182 ----------RRFSAKIMQEATRLGALVTELIALSRLQGA 211

CP001630_1423: domain 1 of 1, from 244 to 308: score 60.0, E = 2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+a++sH+LR+PLta+++ ++ L++ + +ee
CP001630_1 244 AQRAFVADASHQLRNPLTALKLRLSNLED----------AVTEEG-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l ea+rl+r+++++L ++r+e+
CP001630_1 279 ----------RPHQAAALAEANRLNRILDEMLAMARAESS 308

CP001630_2431: domain 1 of 1, from 364 to 428: score 59.9, E = 2.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++++sHELRTPLta+ ++ lL + + ++ e
CP001630_2 364 LKTEFISTISHELRTPLTALTSLTPLLVA---------DRRDGER-- 399

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e ++r ++r+ L++ lL l++ e+
CP001630_2 400 -----------QVAEAVERNVNRMAGLVETLLLLAKVESH 428

CP001630_1929: domain 1 of 1, from 646 to 714: score 58.7, E = 4.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +l+++ H+LRTPLt+I++ + L++ + ls+e++
CP001630_1 646 LRTALLSAVGHDLRTPLTSIKASVGSLRD-------VELSLSAEDT- 684

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le ++ +a+rl L+++lLd sr+ +g
CP001630_1 685 ----------AELLEAVELSADRLTGLVDNLLDSSRLATG 714

CP001630_0602: domain 1 of 1, from 235 to 307: score 58.2, E = 6.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
++++++a++ HELRTPLt++r+++elLl+ + +g+++ls+e++
CP001630_0 235 RQRRLVADAGHELRTPLTSMRTNLELLLA----SeRPGSPTLSDEDK 277

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ + ++ +++ l Li dl +l+r +a+
CP001630_0 278 -----------AEINDDVRAQLDELTTLIGDLVELAREDAP 307

CP001630_3950: domain 1 of 1, from 370 to 434: score 53.1, E = 1.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +++ +HELRTPL+ Irg +e++++++ t++++e
CP001630_3 370 LRKAAVSDTAHELRTPLSNIRGWLEAAEDGV-------TDRDPEL-- 407

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ea l+++++dl dl+ ++ag
CP001630_3 408 -------------IALLLKEALALQHIVDDLQDLAVADAG 434

CP001630_5313: domain 1 of 1, from 241 to 306: score 50.6, E = 9.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a++sHELR P++a+r+ +e+++ ++ +++
CP001630_5 241 ENRRFAADASHELRSPIAALRAELEIARS---------HPENADW-- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +l +++r+++L dlL l+r+++
CP001630_5 277 ----------PSVVEGALADTDRIQALTTDLLLLTRLDHT 306

CP001630_3926: domain 1 of 1, from 234 to 301: score 49.0, E = 2.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f+ ++sHELR PLt++ +a +L++++ +el+
CP001630_3 234 RDARFAGDVSHELRSPLTTMVNAAAVLRRRG-------AELDGTA-- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l + +e++r r++ dlL++sr +
CP001630_3 272 ----------GKALALLTSEVDRFARMVVDLLEISRSAEH 301

CP001630_2850: domain 1 of 1, from 258 to 322: score 48.8, E = 2.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++ +sH+LRTP++++r+++e +l+ ++e ++
CP001630_2 258 RERSFTSRASHQLRTPVAGLRLHLESALD-----------APEADL- 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+t ++a+rl+r i+dlL l+r+
CP001630_2 293 ----------RPALRTGVEAADRLERTIDDLLALTRATPA 322

CP001630_4882: domain 1 of 1, from 272 to 340: score 47.9, E = 5.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L PL + +++lL++++ ++ l++
CP001630_4 272 ELEQFAYVASHDLQEPLRKVASFCQLLERRY------SGQLDARG-- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++ + + a+r++ LindlL +sr +
CP001630_4 311 ----------EQYIQFAVDGAKRMQVLINDLLAFSRVGRI 340

CP001630_4383: domain 1 of 1, from 139 to 203: score 47.2, E = 8.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHELRTPL+ +++++++ + d++++ ++
CP001630_4 139 EQRRFAANASHELRTPLAITQALLDVAHD--------DPAWDRGEA- 176

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +++ + +r +L + lL l+r ++g
CP001630_4 177 -------------LARLRTANRRAIDLTEALLLLARGDSG 203

CP001630_2858: domain 1 of 1, from 552 to 620: score 41.7, E = 3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ ++HE++ PL +I+ +a + e++ +e+ +e +
CP001630_2 552 DLDTFTHVAAHEMKEPLRGISNAAAFIGEDA-------GEALDEVT- 590

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l ti+ a+r+++Lin lL ++++++
CP001630_2 591 ----------VRRLGTIQALAHRMDELINSLLHFAQLGQA 620

CP001630_4229: domain 1 of 1, from 180 to 249: score 40.6, E = 6.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++ HELRTP++ r+ a+lL ++++ + l++e+
CP001630_4 180 RQRRFVADAGHELRTPIARARLRAQLLARRAE-----AEGLPAEH-- 219

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l+++ + l + ++dlL + + ++
CP001630_4 220 ----------RAGLDRLVGTIGGLGDVVDDLLRSALLTEQ 249

CP001630_5537: domain 1 of 1, from 239 to 304: score 39.9, E = 9.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f++++sH+LR+PL+++r++++ L+ + ++
CP001630_5 239 RQRAFVSDASHQLRNPLASLRLAVDDLEH---------HVSDDAG-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ +++ +eae + r ++ lL +r+++
CP001630_5 275 ----------REAQRIAVDEAEEMGRVLDTLLAATRLDSA 304

CP001630_2592: domain 1 of 1, from 258 to 329: score 38.8, E = 1.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ ++ HELRTPLt++r+++elLl +e s ++
CP001630_2 258 AQRRLVEDAGHELRTPLTSLRANVELLLH---------AENSGRALP 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ R r++l ++ ++ l +L+ +l +l++ + +
CP001630_2 296 EADR------RRLLADLEAQSVELTALVAELVELAKQDRE 329

CP001630_2121: domain 1 of 1, from 233 to 297: score 36.7, E = 8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++a+ sH LR+P++a+r+ +++L + ++
CP001630_2 233 RQRELIADTSHSLRNPMAALRLRLDALAP----------NIRPKA-- 267

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +l ea+rl++++n lL l+ +e+
CP001630_2 268 ----------ERTYTAALTEADRLESMLNALLALASAESR 297

CP001630_2346: domain 1 of 1, from 441 to 513: score 35.7, E = 1.5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ +++H+L TPLt+ g ++l ++ + ++
CP001630_2 441 ELANFAGSVAHDLLTPLTTAHGWTDLTASLI-------EDHPTHPAA 480

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
peL ++++++ r+ r++ Li dlL ++ ++
CP001630_2 481 PEL-------TDAIDRVARANTRMSTLITDLLAYTTARDA 513

CP001630_4855: domain 1 of 1, from 217 to 268: score 28.2, E = 2.1e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +e la+lsH LRTPLta+r+ +e+L ++
CP001630_4 217 SEREILADLSHRLRTPLTALRLDSETLGP---------DPGANRV-- 252

peLRledpeyreyletilreaerllr<-*
r++++ ++re++ l r
CP001630_4 253 ----------RQAVHALEREVNELIR 268

CP001630_6208: domain 1 of 1, from 201 to 265: score 27.4, E = 3.5e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +e++ ++sH+LR Lta+++ +e+L e + +e+
CP001630_6 201 RERELVGDVSHQLRSRLTALQLRLEALAE----------HPEPET-- 235

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +l++aerl + +n+lL +r+
CP001630_6 236 ----------AGEARAALEQAERLTEVLNELLAAARAARA 265


Histogram of all scores:
score obs exp (one = represents 23 sequences)
----- --- ---
-16 1 0|=
-15 1 0|=
-14 26 0|==
-13 84 5|*===
-12 305 158|======*=======
-11 662 819|============================= *
-10 1168 1520|=================================================== *
-9 1322 1570|==========================================================*
-8 1196 1175|===================================================*
-7 898 741|================================*=======
-6 519 426|==================*====
-5 323 233|==========*====
-4 168 125|=====*==
-3 98 66|==*==
-2 47 34|=*=
-1 30 18|*=
0 12 9|*
1 7 4|*
2 7 2|*
3 1 1|*
4 1 0|=
> 5 40 -|==


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 1615.3947
P(chi-square) = 0

Total sequences searched: 6916

Whole sequence top hits:
tophits_s report:
Total hits: 36
Satisfying E cutoff: 36
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 36
Satisfying E cutoff: 36
Total memory: 35K


Acknowledgements:

This research is funded by:

Developed by: