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Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
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Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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41 projects found  

1 accessions found for Pedobacter heparinus DSM 2366  

Data for CP001681  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001681.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001681_1932 CDS_2252836-2249297 96.5 5.5e-27 1
CP001681_0581 CDS_706659-705073 93.6 3.7e-26 1
CP001681_3441 CDS_4136428-4134308 89.8 4.3e-25 1
CP001681_1217 CDS_1447253-1444890 82.6 4.8e-23 1
CP001681_3507 CDS_4215758-4217728 81.4 1.1e-22 1
CP001681_0583 CDS_710999-707514 80.5 1.8e-22 1
CP001681_4213 CDS_5126548-5122958 80.4 2e-22 1
CP001681_2512 CDS_2946061-2944430 78.7 6.2e-22 1
CP001681_3717 CDS_4495970-4493493 78.2 8.6e-22 1
CP001681_4214 CDS_5127684-5126560 75.9 3.9e-21 1
CP001681_2481 CDS_2904800-2903040 74.4 1e-20 1
CP001681_0192 CDS_223938-222913 69.1 3.2e-19 1
CP001681_0787 CDS_938368-939558 68.9 3.5e-19 1
CP001681_3338 CDS_4006029-4003888 68.6 4.4e-19 1
CP001681_3823 CDS_4629924-4627531 67.0 1.3e-18 1
CP001681_3878 CDS_4709724-4705711 66.4 1.9e-18 1
CP001681_0872 CDS_1031214-1032794 65.9 2.6e-18 1
CP001681_3151 CDS_3787864-3789981 63.7 1.1e-17 1
CP001681_1793 CDS_2110490-2108001 62.2 2.9e-17 1
CP001681_2701 CDS_3219269-3215202 58.1 4.3e-16 1
CP001681_1686 CDS_2011667-2014594 58.0 4.4e-16 1
CP001681_2092 CDS_2440641-2439439 57.9 4.7e-16 1
CP001681_2471 CDS_2893149-2891965 57.6 5.8e-16 1
CP001681_0471 CDS_562926-565085 57.4 6.7e-16 1
CP001681_1306 CDS_1571653-1567541 55.4 2.5e-15 1
CP001681_0779 CDS_919384-923508 55.3 2.6e-15 1
CP001681_1333 CDS_1603519-1602161 53.7 7.2e-15 1
CP001681_2850 CDS_3425448-3426566 53.2 1e-14 1
CP001681_2314 CDS_2724256-2723204 51.4 3.4e-14 1
CP001681_2623 CDS_3096094-3092003 51.2 3.9e-14 1
CP001681_2797 CDS_3355459-3351335 50.7 5.3e-14 1
CP001681_0202 CDS_233558-235402 48.9 1.7e-13 1
CP001681_3414 CDS_4099645-4098809 48.8 1.9e-13 1
CP001681_1176 CDS_1403745-1402435 47.7 3.8e-13 1
CP001681_3637 CDS_4384780-4383401 46.4 8.7e-13 1
CP001681_0503 CDS_611621-607617 45.5 1.5e-12 1
CP001681_2805 CDS_3371892-3367870 43.8 4.8e-12 1
CP001681_3973 CDS_4847918-4843794 43.2 7.1e-12 1
CP001681_0364 CDS_433149-434816 40.5 4.2e-11 1
CP001681_2517 CDS_2954480-2953227 40.0 5.8e-11 1
CP001681_0758 CDS_889644-891536 38.3 1.7e-10 1
CP001681_1459 CDS_1745651-1744329 37.7 2.5e-10 1
CP001681_2433 CDS_2849876-2851192 33.9 3e-09 1
CP001681_2529 CDS_2969479-2968283 33.6 3.8e-09 1
CP001681_1322 CDS_1587067-1588305 30.6 2.6e-08 1
CP001681_1510 CDS_1806503-1807804 30.4 3e-08 1
CP001681_4112 CDS_5022572-5018880 28.0 1.4e-07 1
CP001681_1583 CDS_1891491-1889509 27.2 2.4e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001681_1932 1/1 549 614 .. 1 87 [] 96.5 5.5e-27
CP001681_0581 1/1 158 223 .. 1 87 [] 93.6 3.7e-26
CP001681_3441 1/1 336 401 .. 1 87 [] 89.8 4.3e-25
CP001681_1217 1/1 417 482 .. 1 87 [] 82.6 4.8e-23
CP001681_3507 1/1 281 345 .. 1 87 [] 81.4 1.1e-22
CP001681_0583 1/1 488 556 .. 1 87 [] 80.5 1.8e-22
CP001681_4213 1/1 528 594 .. 1 87 [] 80.4 2e-22
CP001681_2512 1/1 167 231 .. 1 87 [] 78.7 6.2e-22
CP001681_3717 1/1 345 408 .. 1 87 [] 78.2 8.6e-22
CP001681_4214 1/1 147 215 .. 1 87 [] 75.9 3.9e-21
CP001681_2481 1/1 359 427 .. 1 87 [] 74.4 1e-20
CP001681_0192 1/1 115 182 .. 1 87 [] 69.1 3.2e-19
CP001681_0787 1/1 174 239 .. 1 87 [] 68.9 3.5e-19
CP001681_3338 1/1 482 550 .. 1 87 [] 68.6 4.4e-19
CP001681_3823 1/1 429 494 .. 1 87 [] 67.0 1.3e-18
CP001681_3878 1/1 1113 1182 .. 1 87 [] 66.4 1.9e-18
CP001681_0872 1/1 142 207 .. 1 87 [] 65.9 2.6e-18
CP001681_3151 1/1 342 407 .. 1 87 [] 63.7 1.1e-17
CP001681_1793 1/1 609 676 .. 1 87 [] 62.2 2.9e-17
CP001681_2701 1/1 834 900 .. 1 87 [] 58.1 4.3e-16
CP001681_1686 1/1 748 817 .. 1 87 [] 58.0 4.4e-16
CP001681_2092 1/1 175 242 .. 1 87 [] 57.9 4.7e-16
CP001681_2471 1/1 173 241 .. 1 87 [] 57.6 5.8e-16
CP001681_0471 1/1 340 405 .. 1 87 [] 57.4 6.7e-16
CP001681_1306 1/1 839 905 .. 1 87 [] 55.4 2.5e-15
CP001681_0779 1/1 854 920 .. 1 87 [] 55.3 2.6e-15
CP001681_1333 1/1 230 296 .. 1 87 [] 53.7 7.2e-15
CP001681_2850 1/1 147 215 .. 1 87 [] 53.2 1e-14
CP001681_2314 1/1 132 200 .. 1 87 [] 51.4 3.4e-14
CP001681_2623 1/1 830 896 .. 1 87 [] 51.2 3.9e-14
CP001681_2797 1/1 854 920 .. 1 87 [] 50.7 5.3e-14
CP001681_0202 1/1 384 452 .. 1 87 [] 48.9 1.7e-13
CP001681_3414 1/1 58 124 .. 1 87 [] 48.8 1.9e-13
CP001681_1176 1/1 219 285 .. 1 87 [] 47.7 3.8e-13
CP001681_3637 1/1 229 295 .. 1 87 [] 46.4 8.7e-13
CP001681_0503 1/1 826 892 .. 1 87 [] 45.5 1.5e-12
CP001681_2805 1/1 817 882 .. 1 87 [] 43.8 4.8e-12
CP001681_3973 1/1 841 911 .. 1 87 [] 43.2 7.1e-12
CP001681_0364 1/1 333 400 .. 1 87 [] 40.5 4.2e-11
CP001681_2517 1/1 211 277 .. 1 87 [] 40.0 5.8e-11
CP001681_0758 1/1 411 475 .. 1 87 [] 38.3 1.7e-10
CP001681_1459 1/1 220 284 .. 1 87 [] 37.7 2.5e-10
CP001681_2433 1/1 218 284 .. 1 87 [] 33.9 3e-09
CP001681_2529 1/1 173 239 .. 1 87 [] 33.6 3.8e-09
CP001681_1322 1/1 206 271 .. 1 87 [] 30.6 2.6e-08
CP001681_1510 1/1 202 268 .. 1 87 [] 30.4 3e-08
CP001681_4112 1/1 1012 1083 .. 1 87 [] 28.0 1.4e-07
CP001681_1583 1/1 433 499 .. 1 87 [] 27.2 2.4e-07

Alignments of top-scoring domains:
CP001681_1932: domain 1 of 1, from 549 to 614: score 96.5, E = 5.5e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTPL++I+g+++lL + t l+e q
CP001681_1 549 AKSEFLANMSHEIRTPLNGIIGFTDLLIK---------TQLNETQ-- 584

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+++ ++++ ll+ ind+Ld+s+ieag
CP001681_1 585 ----------QQYLSIVTQSGNALLNTINDILDFSKIEAG 614

CP001681_0581: domain 1 of 1, from 158 to 223: score 93.6, E = 3.7e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ flan+sHE+RTP+++I+g a+lL++ tel++eq
CP001681_0 158 IKDNFLANMSHEIRTPINGIIGIAQLLKK---------TELTDEQ-- 193

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ ++ ++++ll ind+Ldls+ie+g
CP001681_0 194 ----------REMVNLLEISSNSLLGVINDVLDLSKIESG 223

CP001681_3441: domain 1 of 1, from 336 to 401: score 89.8, E = 4.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+flan+sHE+RTPL+++ g++e L + ls+eq
CP001681_3 336 SKSRFLANMSHEIRTPLNSVVGFSEQLSQ---------GILSPEQ-- 371

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ i++++e ll+L+n++Ld+s+ e g
CP001681_3 372 ----------KDQVDAIRNSSEMLLSLVNEILDFSKYEVG 401

CP001681_1217: domain 1 of 1, from 417 to 482: score 82.6, E = 4.8e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+++sHE+RTPL+a++g+++lLl+ + + e++
CP001681_1 417 AKSEFLSTMSHEIRTPLNAVIGMSHLLLK----------NGPREDQ- 452

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+++l +a+ ll+++nd+Ld+ +ieag
CP001681_1 453 ----------KEQLDVMLFSANNLLSIVNDILDYNKIEAG 482

CP001681_3507: domain 1 of 1, from 281 to 345: score 81.4, E = 1.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fl+ +sHE+RTPL++I+g a lL+ + + +q
CP001681_3 281 AKTDFLSVMSHEIRTPLNGIIGIANLLKL----------KHTMDQ-- 315

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+++++ +a++ll+Lind+Ldl++ie+
CP001681_3 316 ----------EEYVRSLIFSADHLLQLINDILDLTKIESD 345

CP001681_0583: domain 1 of 1, from 488 to 556: score 80.5, E = 1.8e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++I+ +a +L+e + ++l+e+q+
CP001681_0 488 YKSEFLANMSHELRTPLNSILILARILKE------NRPENLNEDQI- 527

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y +i++++ ll Lind+Ldls+ie+g
CP001681_0 528 -----------KYAGVIHNAGTDLLTLINDILDLSKIESG 556

CP001681_4213: domain 1 of 1, from 528 to 594: score 80.4, E = 2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++I+++++l+ e+ el+ e +
CP001681_4 528 YKSEFLANMSHELRTPLNSILLLSKLMSEN--------KELDKEYI- 565

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey e+i+++++ ll Li+++Ldls+ieag
CP001681_4 566 -----------EYAEVIQSSGQGLLGLIDEILDLSKIEAG 594

CP001681_2512: domain 1 of 1, from 167 to 231: score 78.7, E = 6.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fl+ +sHE+RTPL++I+g a lL+ + + +q
CP001681_2 167 TKSDFLSVMSHEIRTPLNGIIGIANLLKL----------NHTMDQ-- 201

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+ ++ +a++l +Lind+Ldl+++e++
CP001681_2 202 ----------KEYIGNLIFSADHLMQLINDILDLTKMENE 231

CP001681_3717: domain 1 of 1, from 345 to 408: score 78.2, E = 8.6e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fl+n+sHE+RTPL +I+gy+el++ ++ +q
CP001681_3 345 AKQRFLSNMSHEIRTPLQSIIGYSELIRQ---------QK--NPQ-- 378

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ i++++e+ll+++n++Ld+ ri +g
CP001681_3 379 ----------RKDIDAIYHSSEHLLQIVNEVLDYNRIISG 408

CP001681_4214: domain 1 of 1, from 147 to 215: score 75.9, E = 3.9e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++ +sHEL+TPLt+++gy++lL + + ++ + +++
CP001681_4 147 KKDEFISIASHELKTPLTSVKGYVQLLGRSV-------DKGDIPTV- 185

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l +++ ++e l++Li dlLd+s+ie+g
CP001681_4 186 ----------KKHLAKAQVQLEKLNELIADLLDISKIESG 215

CP001681_2481: domain 1 of 1, from 359 to 427: score 74.4, E = 1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+a++sHEL+TP+++I++ ++l+ + + + +++eq
CP001681_2 359 AKTNFIATVSHELKTPISSIKMSLKLMDD------ERVGVMNPEQ-- 397

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ i+++ rll++ ++lLdl++ e+g
CP001681_2 398 ----------KELVQHIREDCGRLLKITSELLDLAQVETG 427

CP001681_0192: domain 1 of 1, from 115 to 182: score 69.1, E = 3.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++efl+n+sHE++TPL aI+gy+e+L++ l+e+
CP001681_0 115 FRREFLSNVSHEFKTPLFAIQGYIETLQD----------CLTEDP-- 149

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++l+++++ +erl+ Li dl +s++e+g
CP001681_0 150 -------EMAAKFLDKAEKNVERLSYLITDLDSISKLETG 182

CP001681_0787: domain 1 of 1, from 174 to 239: score 68.9, E = 3.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a l H+LR+P+ a++ +a+lLl+ +l++
CP001681_0 174 LREQFIAILGHDLRNPVGAVSNAAQLLLR---------MPLDDRM-- 209

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ +i++++ r+ Li+++Ld++r + g
CP001681_0 210 ----------RRLAGIIQDSSLRIKGLIENILDFARGRLG 239

CP001681_3338: domain 1 of 1, from 482 to 550: score 68.6, E = 4.4e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f+a++sHE++TPLt++++ +++L++++ +e + +
CP001681_3 482 RKNDFIAMVSHEIKTPLTSMSAILQMLQRKF-------AESEDVLV- 520

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+++ +++ ++++i+ +L +sr+e+g
CP001681_3 521 ----------SQLLDRANLQVKKMNKMISGFLNISRLESG 550

CP001681_3823: domain 1 of 1, from 429 to 494: score 67.0, E = 1.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fl+ +sHE+RTPL+a++g+++lL e + + q+
CP001681_3 429 AKEMFLSVMSHEIRTPLNAVIGMTHLLIE---------NDPRASQI- 465

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l++++ ++e ll++ind+Ld++++e+g
CP001681_3 466 -----------EDLNILKFSGENLLNIINDILDFTKMETG 494

CP001681_3878: domain 1 of 1, from 1113 to 1182: score 66.4, E = 1.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++ +sHEL+TP+t+I+g+++l ++ +a ++++ +
CP001681_3 1113 KKDEFMSIASHELKTPITSIKGFLQLTKR-----AAAKGTADRDM-- 1152

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++++ r++e l L+ndlLd s+i+ag
CP001681_3 1153 ----------LIYIDKANRQLENLTFLVNDLLDVSKIQAG 1182

CP001681_0872: domain 1 of 1, from 142 to 207: score 65.9, E = 2.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fl n+sHE+RTP++aI+g+a L+e + ++ +q
CP001681_0 142 VKQYFLVNMSHEIRTPMNAILGFARHLQE---------SLKDKDQ-- 177

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e ++ i++++++ll +nd+Ld++ ie+g
CP001681_0 178 ----------MESIKMIIKSGDHLLVTLNDILDFANIETG 207

CP001681_3151: domain 1 of 1, from 342 to 407: score 63.7, E = 1.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k ++l n+sHE+R+PLtaI+g++ + + t+lse q
CP001681_3 342 QKMDLLLNMSHEIRNPLTAIKGFLYIFGK---------TNLSERQ-- 377

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+le+i+++++ llr +nd Ld ++e+
CP001681_3 378 ----------TEMLESIKSSSDMLLRTLNDTLDAGKMENS 407

CP001681_1793: domain 1 of 1, from 609 to 676: score 62.2, E = 2.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f++ +sHEL+TP+t++++ ++lL++ ++++ +l
CP001681_1 609 QKDDFISIASHELKTPITSLKASLQLLER---------MKANPTPML 646

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e r+ e + L++dlL +ri +g
CP001681_1 647 ----------SRLIEQSNRSMEKVSVLVDDLLNVTRINEG 676

CP001681_2701: domain 1 of 1, from 834 to 900: score 58.1, E = 4.3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ n+sHE+RTPLt I g +e L + dt+ s+
CP001681_2 834 MKMDFFTNVSHEIRTPLTLIVGPLERLIN--------DTKESPGL-- 870

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l t+++ a rl rL+n+l+d+ + eag
CP001681_2 871 ----------NRRLLTVKKNAGRLTRLVNELMDFRKEEAG 900

CP001681_1686: domain 1 of 1, from 748 to 817: score 58.0, E = 4.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f+a +sHEL+TPLt+++gy++l++ ++d + +
CP001681_1 748 RKNDFIAIVSHELKTPLTSLKGYLQLMRGRFD------SSAAHSF-- 786

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e+ l ++e + +L+ +Ld +r+e+
CP001681_1 787 ---------FSTVSEKSLAQVEKMHSLVKGFLDVARLESA 817

CP001681_2092: domain 1 of 1, from 175 to 242: score 57.9, E = 4.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++ +sHE++TP+t+I++ya++L++ ++e+s +
CP001681_2 175 KKNEFISIASHEIKTPITVIKAYAQMLKM-------MRSECSNKA-- 212

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++++ +++ l+ L n+l+d s+ e+g
CP001681_2 213 ----------NEIIDRLNGQTNKLSYLANQLMDVSKVENG 242

CP001681_2471: domain 1 of 1, from 173 to 241: score 57.6, E = 5.8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+f++++sHE+RTPL+++++ ++l+++++ ++ + + +
CP001681_2 173 MKSRFVSMASHEFRTPLSSVQLSSSLIEKYA-------QPFNNKNI- 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +i++++ l ++nd+L l+r+eag
CP001681_2 212 ----------IKHVGKIKNAVGNLTTILNDFLSLERLEAG 241

CP001681_0471: domain 1 of 1, from 340 to 405: score 57.4, E = 6.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k ++l +sHE+R+PL+aI+g++ + + t+ls eq
CP001681_0 340 QKMDLLNRMSHEIRNPLNAIKGFLYVFSR---------TNLSKEQ-- 375

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++i+ +++ ll+ ++d Ld s++e+
CP001681_0 376 ----------TTMIDSIKLSSDMLLQTLDDTLDASKMENS 405

CP001681_1306: domain 1 of 1, from 839 to 905: score 55.4, E = 2.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k f+ n+sHE++TPLt I++ ++ Ll e + +
CP001681_1 839 RKLSFFTNISHEIKTPLTLILAPIDKLLG--------LNEGNNKI-- 875

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l ++r +erllrLin+lLd+ + e+g
CP001681_1 876 ----------QNQLMLMQRNGERLLRLINQLLDFRKFESG 905

CP001681_0779: domain 1 of 1, from 854 to 920: score 55.3, E = 2.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ +sHE+RTPLt I + +e L ++ +++
CP001681_0 854 MKLDFFTRISHEIRTPLTLIFAPLEKLIQ---------LTKENDTV- 890

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l i+r ++rllrLi++lLd+ +ie+g
CP001681_0 891 ----------NQQLLGIKRNTDRLLRLISELLDFRKIESG 920

CP001681_1333: domain 1 of 1, from 230 to 296: score 53.7, E = 7.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+an+sHELRTP+t ++ ael l +e+ ++
CP001681_1 230 LQRTFVANASHELRTPITRMIISAELSLS---------QEREKQD-- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr++l+++l++ae ++ +i l l++ + +
CP001681_1 266 ---------YRKALSSVLEDAEKMEGIITGLVNLAQTDLE 296

CP001681_2850: domain 1 of 1, from 147 to 215: score 53.2, E = 1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f+ ++sHEL+TPLta+++y++lL +++ +++++ +
CP001681_2 147 RRSKFIGMVSHELKTPLTALKAYIQLLNKWAK------QKRDSFSI- 186

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l++++++++ + +in +L +s +e+g
CP001681_2 187 -----------GALSKLEKQVKKMTTMINGFLNFSGAESG 215

CP001681_2314: domain 1 of 1, from 132 to 200: score 51.4, E = 3.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L PL +++ ++el ++e+ + ++
CP001681_2 132 ELEQFVYIASHDLQEPLLTVKNFVELFKDEYK------DVFDDNA-- 170

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ i+r++er+++Li lLd+sr++ +
CP001681_2 171 ----------KLYLQFIDRSTERMRNLIKGLLDYSRLGGQ 200

CP001681_2623: domain 1 of 1, from 830 to 896: score 51.2, E = 3.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +++ ++sH++RTPLt I+g +e + + ++ +
CP001681_2 830 LRLKLFTDVSHDFRTPLTLIIGPLEKMIG---------KNGGDHYI- 866

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ e++l+ a+ ll+Lin++Ld+ + e+g
CP001681_2 867 ----------RKQHEVMLKNARMLLQLINQILDIRKVESG 896

CP001681_2797: domain 1 of 1, from 854 to 920: score 50.7, E = 5.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ n+sHE+RTPLt I++ +e + + + +++ +
CP001681_2 854 MKMDFFTNVSHEFRTPLTLILAPLEEIMN---------KPVTDKSL- 890

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ e +l a+rl +L+++l ++ + e g
CP001681_2 891 ----------RRHHELMLLNAKRLYHLVDQLFEFKKTELG 920

CP001681_0202: domain 1 of 1, from 384 to 452: score 48.9, E = 1.7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f+ n+ HE++TP+++I+ ++e+L++ + ++ r
CP001681_0 384 MKTDFINNMTHEFKTPVATIMIASEALKD--------PEIVADKSR- 421

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ +i++e rl + i+++L ++r+e
CP001681_0 422 ---------ISRLAGIIYDENVRLGNHIERVLSIARLEKK 452

CP001681_3414: domain 1 of 1, from 58 to 124: score 48.8, E = 1.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ fl ++ HEL+ PL+aI++ ++++ + +l+ +
CP001681_3 58 QQQNFLLSVTHELKSPLAAIKLSIQTIIK---------RDLDKARQ- 94

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+ l+++erl++L++++L ++ie+
CP001681_3 95 ----------TSLLSNSLKDIERLDDLVENMLLATKIENR 124

CP001681_1176: domain 1 of 1, from 219 to 285: score 47.7, E = 3.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ef+an+sHEL TP++++ + +e Ll+ +eq+
CP001681_1 219 TEKEFIANVSHELLTPISVLNTRLENLLN-------------DEQLT 252

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + l l+ ++rl ++in lL +s+ e++
CP001681_1 253 QEG-------ENKLFASLKTLNRLKAIINSLLLISKVENN 285

CP001681_3637: domain 1 of 1, from 229 to 295: score 46.4, E = 8.7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f++n+sHEL+TPLt I + +el l+ s+e+
CP001681_3 229 TQNNFVSNASHELKTPLTIITAETELVLA--------QKGISPET-- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +til a+ l ++i lL l++ +
CP001681_3 266 ----------EASAKTILYHADKLGHIITSLLGLAQSGFD 295

CP001681_0503: domain 1 of 1, from 826 to 892: score 45.5, E = 1.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak ef+ ++ HE++TPLt I+g +e + ++ +q+
CP001681_0 826 AKIEFFTYVTHEIKTPLTLIKGPLEEVMR---------HAEALPQV- 862

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l t+++ ++rl +L ++lL + + e +
CP001681_0 863 ----------KENLTTMEKNTNRLIELTDQLLGFRKTEIE 892

CP001681_2805: domain 1 of 1, from 817 to 882: score 43.8, E = 4.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +f+ n+sHELRTPLt I++ +e L + +l ++
CP001681_2 817 VKMDFFTNVSHELRTPLTLILAPLEELIK---------IPLADKV-- 852

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ + a+rl +L+++l ++ + e g
CP001681_2 853 ----------SKKLNLMSVNAKRLYSLVDQLFEFRKTEMG 882

CP001681_3973: domain 1 of 1, from 841 to 911: score 43.2, E = 7.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ n++HE+ TPLt I+g +e l+ +++se +
CP001681_3 841 QRLNFFTNIAHEIQTPLTMIMGSVEHYLR---------SKKSELLKN 878

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +++++++ + rl L+++lL++ ++eag
CP001681_3 879 KEN-------NYFISIVHQHTARLTYLVQQLLEFRKAEAG 911

CP001681_0364: domain 1 of 1, from 333 to 400: score 40.5, E = 4.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f+ nl HE++TP+++I+ + ++ ++l++ ++
CP001681_0 333 LQYDFVNNLTHEFKTPVSVIKIAGNNIKS--------AAALTDREL- 370

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y +++++ea+ l+ L n lL +++ie+
CP001681_0 371 ----------KMYGKILDEEADKLNGLMNKLLAFTQIENK 400

CP001681_2517: domain 1 of 1, from 211 to 277: score 40.0, E = 5.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ n+sHE+ TPL++I +++L ++ ++ q
CP001681_2 211 ELKTFTDNASHEMMTPLAVINSKLDTLIQ--------TGAFTDRQ-- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e ++ + rl+rL + lL l++ie++
CP001681_2 248 ----------GQLIEDVYLGVSRLSRLNQSLLLLAKIENN 277

CP001681_0758: domain 1 of 1, from 411 to 475: score 38.3, E = 1.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+++++ + H+LR+P+ +I ++ ++ e +els e++
CP001681_0 411 IKDQLFSIIGHDLRNPVGGITQLLAVMDE---------QELSLEEL- 447

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ ++++++ l+++n l l + ea+
CP001681_0 448 ----------HQMISAMRKQGDVALEILNAL--LNWGEAQ 475

CP001681_1459: domain 1 of 1, from 220 to 284: score 37.7, E = 2.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+kse l ++H+LR+PL+ I +++ + le+ ++ ++ ++
CP001681_1 220 QKSEILGFVAHDLRNPLNNIEALTRIVLEDN-------PDFGSTEM- 258

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ il+++++ ++i+dlL++++
CP001681_1 259 --------------QLILSSTRQAKSIIDDLLEIAQHNKT 284

CP001681_2433: domain 1 of 1, from 218 to 284: score 33.9, E = 3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ef+an+sHEL TP++ ++ e L d+ l+ee
CP001681_2 218 KEREFTANASHELMTPISILQNKMENLIG--------DEQLNEEA-- 254

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + ++rl ++ + lL +srie++
CP001681_2 255 ----------VVKIADMMKTLDRLKKISRSLLLISRIENE 284

CP001681_2529: domain 1 of 1, from 173 to 239: score 33.6, E = 3.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ l + +H+L++PLt+I a+l+++ + ++e +
CP001681_2 173 RQQQILNTTAHDLKNPLTTIPVRADLIKM---------KKNNPEMV- 209

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i+ ++ + r+i++lL+ +e+
CP001681_2 210 ----------DTMCDQIKVASLNMVRIIDELLQSGSMESD 239

CP001681_1322: domain 1 of 1, from 206 to 271: score 30.6, E = 2.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ ef+ n+sHE+ TPL+ +++ +e + +l++ +
CP001681_1 206 ALKEFTENASHEIQTPLSILKASLESMSQ---------IALDANLI- 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ ++ ++ rl++ lL l+++e++
CP001681_1 243 -----------KPLNDAKLAVTRLSKVNKGLLLLAKLENN 271

CP001681_1510: domain 1 of 1, from 202 to 268: score 30.4, E = 3e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+++l+ l+H+L+ PL++I+gy+elL e +l e +r
CP001681_1 202 TKNKLLSILAHDLKEPLASIQGYLELLTE---------YKLEEAER- 238

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +l+ ++ ++ ++L ++ + +
CP001681_1 239 ----------LNMEKQLLSRTKDTAYILANVLSWTKGQME 268

CP001681_4112: domain 1 of 1, from 1012 to 1083: score 28.0, E = 1.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++ ++HE+++PLt +++ ++lL++ + + + +
CP001681_4 1012 AWREMAKQVAHEIKNPLTPLKLGVQLLEK---------SWKEQDPN- 1048

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++++ ++ ++++++l+ + +++ ++++
CP001681_4 1049 -----FEKKFERFNKSFIEQIDSLSTIASEFSNFAKMPDT 1083

CP001681_1583: domain 1 of 1, from 433 to 499: score 27.2, E = 2.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+++++ ++H+LR P +++ +l + + ls +++
CP001681_1 433 VKNKLFSIIAHDLRSPFNSLVSIFSLKDM---------DLLSLDEL- 469

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ +++++ + + +n+lL ++ +
CP001681_1 470 ----------KMLLNENKKSIDTIHNTLNNLLYWAKSQMD 499


Histogram of all scores:
score obs exp (one = represents 15 sequences)
----- --- ---
-15 4 0|=
-14 15 0|=
-13 48 3|*===
-12 206 97|======*=======
-11 472 504|================================ *
-10 774 935|==================================================== *
-9 857 965|==========================================================*
-8 724 722|================================================*
-7 472 455|==============================*=
-6 277 262|=================*=
-5 160 143|=========*=
-4 94 76|=====*=
-3 41 40|==*
-2 23 21|=*
-1 10 11|*
0 7 5|*
1 5 3|*
2 3 1|*
> 3 60 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 171.3277
P(chi-square) = 2.554e-30

Total sequences searched: 4252

Whole sequence top hits:
tophits_s report:
Total hits: 48
Satisfying E cutoff: 48
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 48
Satisfying E cutoff: 48
Total memory: 40K


Acknowledgements:

This research is funded by:

Developed by: