Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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39 projects found  

5 accessions found for Cyanothece sp. PCC 8802  

Data for CP001701  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001701.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001701_1453 CDS_1556693-1553685 101.3 2.5e-28 1
CP001701_0814 CDS_857522-860056 100.7 3.5e-28 1
CP001701_1253 CDS_1321745-1318473 100.5 4.2e-28 1
CP001701_2866 CDS_3027521-3025479 96.5 5.5e-27 1
CP001701_1547 CDS_1649955-1648627 94.2 2.6e-26 1
CP001701_1127 CDS_1196695-1193114 94.1 2.6e-26 1
CP001701_1325 CDS_1402902-1407737 91.8 1.2e-25 1
CP001701_1444 CDS_1541018-1543795 91.5 1.5e-25 1
CP001701_2133 CDS_2239845-2242382 91.4 1.6e-25 1
CP001701_2050 CDS_2144319-2142589 88.2 1.2e-24 1
CP001701_2694 CDS_2840748-2838457 84.8 1.2e-23 1
CP001701_1669 CDS_1779088-1775129 83.4 2.8e-23 1
CP001701_3235 CDS_3446910-3448790 78.0 9.5e-22 1
CP001701_3567 CDS_3813969-3815342 76.7 2.4e-21 1
CP001701_4224 CDS_4555840-4551296 73.8 1.5e-20 1
CP001701_4110 CDS_4435315-4437870 73.8 1.5e-20 1
CP001701_2545 CDS_2680619-2679378 70.9 1e-19 1
CP001701_0479 CDS_493427-491352 70.4 1.4e-19 1
CP001701_2047 CDS_2137973-2140546 69.2 3.1e-19 1
CP001701_4076 CDS_4404572-4405882 69.1 3.2e-19 1
CP001701_0474 CDS_486422-487516 66.5 1.8e-18 1
CP001701_2382 CDS_2510937-2509573 66.3 2e-18 1
CP001701_2482 CDS_2618497-2620020 65.5 3.4e-18 1
CP001701_1463 CDS_1563304-1564473 64.4 7.2e-18 1
CP001701_1388 CDS_1477153-1475861 60.2 1.1e-16 1
CP001701_3324 CDS_3542228-3541407 51.6 3e-14 1
CP001701_1874 CDS_1975386-1974313 51.4 3.3e-14 1
CP001701_3971 CDS_4280362-4282644 44.9 2.4e-12 1
CP001701_1282 CDS_1355457-1354282 42.3 1.3e-11 1
CP001701_0952 CDS_1013880-1015421 41.8 1.8e-11 1
CP001701_3953 CDS_4259592-4261007 41.2 2.7e-11 1
CP001701_2548 CDS_2685699-2682487 38.7 1.4e-10 1
CP001701_2942 CDS_3103563-3104867 34.4 2.2e-09 1
CP001701_4227 CDS_4559026-4562526 34.3 2.4e-09 1
CP001701_1288 CDS_1360915-1362297 30.6 2.7e-08 1
CP001701_1452 CDS_1553698-1552574 30.0 3.9e-08 1
CP001701_3620 CDS_3902881-3901379 29.8 4.5e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001701_1453 1/1 529 595 .. 1 87 [] 101.3 2.5e-28
CP001701_0814 1/1 378 444 .. 1 87 [] 100.7 3.5e-28
CP001701_1253 1/1 593 659 .. 1 87 [] 100.5 4.2e-28
CP001701_2866 1/1 419 487 .. 1 87 [] 96.5 5.5e-27
CP001701_1547 1/1 213 281 .. 1 87 [] 94.2 2.6e-26
CP001701_1127 1/1 697 762 .. 1 87 [] 94.1 2.6e-26
CP001701_1325 1/1 1157 1223 .. 1 87 [] 91.8 1.2e-25
CP001701_1444 1/1 261 326 .. 1 87 [] 91.5 1.5e-25
CP001701_2133 1/1 362 427 .. 1 87 [] 91.4 1.6e-25
CP001701_2050 1/1 332 399 .. 1 87 [] 88.2 1.2e-24
CP001701_2694 1/1 385 456 .. 1 87 [] 84.8 1.2e-23
CP001701_1669 1/1 1075 1157 .. 1 87 [] 83.4 2.8e-23
CP001701_3235 1/1 393 460 .. 1 87 [] 78.0 9.5e-22
CP001701_3567 1/1 207 274 .. 1 87 [] 76.7 2.4e-21
CP001701_4224 1/1 351 419 .. 1 87 [] 73.8 1.5e-20
CP001701_4110 1/1 351 419 .. 1 87 [] 73.8 1.5e-20
CP001701_2545 1/1 180 244 .. 1 87 [] 70.9 1e-19
CP001701_0479 1/1 435 502 .. 1 87 [] 70.4 1.4e-19
CP001701_2047 1/1 395 461 .. 1 87 [] 69.2 3.1e-19
CP001701_4076 1/1 210 277 .. 1 87 [] 69.1 3.2e-19
CP001701_0474 1/1 144 208 .. 1 87 [] 66.5 1.8e-18
CP001701_2382 1/1 223 290 .. 1 87 [] 66.3 2e-18
CP001701_2482 1/1 284 347 .. 1 87 [] 65.5 3.4e-18
CP001701_1463 1/1 162 230 .. 1 87 [] 64.4 7.2e-18
CP001701_1388 1/1 199 266 .. 1 87 [] 60.2 1.1e-16
CP001701_3324 1/1 27 94 .. 1 87 [] 51.6 3e-14
CP001701_1874 1/1 131 199 .. 1 87 [] 51.4 3.3e-14
CP001701_3971 1/1 529 597 .. 1 87 [] 44.9 2.4e-12
CP001701_1282 1/1 162 234 .. 1 87 [] 42.3 1.3e-11
CP001701_0952 1/1 239 297 .. 1 77 [. 41.8 1.8e-11
CP001701_3953 1/1 246 312 .. 1 87 [] 41.2 2.7e-11
CP001701_2548 1/1 700 767 .. 1 87 [] 38.7 1.4e-10
CP001701_2942 1/1 181 236 .. 1 76 [. 34.4 2.2e-09
CP001701_4227 1/1 939 1010 .. 1 87 [] 34.3 2.4e-09
CP001701_1288 1/1 220 286 .. 1 87 [] 30.6 2.7e-08
CP001701_1452 1/1 148 216 .. 1 87 [] 30.0 3.9e-08
CP001701_3620 1/1 276 318 .. 5 67 .. 29.8 4.5e-08

Alignments of top-scoring domains:
CP001701_1453: domain 1 of 1, from 529 to 595: score 101.3, E = 2.5e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHELRTPL+aI+g+++++ + d+ ls++q
CP001701_1 529 AKSQFLAKMSHELRTPLNAILGFTQMMNR--------DSSLSSQQ-- 565

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl +i r++e+ll+Lind+L++srieag
CP001701_1 566 ----------QEYLGIINRSGEHLLSLINDVLEMSRIEAG 595

CP001701_0814: domain 1 of 1, from 378 to 444: score 100.7, E = 3.5e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL+aI+g+++lL d++l+eeq
CP001701_0 378 AKSQFLAHMSHELRTPLNAILGFSQLLNH--------DSTLNEEQ-- 414

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+++i r++e+ll+Li+d+Ld+++ieag
CP001701_0 415 ----------QEYIDIINRSGEHLLALIQDILDMAKIEAG 444

CP001701_1253: domain 1 of 1, from 593 to 659: score 100.5, E = 4.2e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHELRTPL+aI+g+++++++ d +l++e+
CP001701_1 593 AKSEFLASMSHELRTPLNAILGFTQVMRR--------DRTLNPEH-- 629

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++i r++e+ll+Lind+L++s+ieag
CP001701_1 630 ----------QQNLSIISRSGEHLLELINDILEMSKIEAG 659

CP001701_2866: domain 1 of 1, from 419 to 487: score 96.5, E = 5.5e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f++n+sHELRTPL I+ ++e+L e++ ++l+ee+r
CP001701_2 419 AKSQFISNVSHELRTPLFNIKSFIETLSEFG-------EDLTEEER- 457

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+let+ +e++rl rL+nd+Ldlsr+e+
CP001701_2 458 ----------KEFLETANHETDRLTRLVNDVLDLSRLESS 487

CP001701_1547: domain 1 of 1, from 213 to 281: score 94.2, E = 2.6e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+ l+++ HELRTPLt+I+g+a++L+eel+ ++l+e+q
CP001701_1 213 NKSDYLSHINHELRTPLTGILGFAKMLREELY------GPLNEKQ-- 251

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++ i ++e+ll+L+nd+Ldls+iea+
CP001701_1 252 ----------KQYINGIAVSGEHLLALVNDFLDLSKIEAE 281

CP001701_1127: domain 1 of 1, from 697 to 762: score 94.1, E = 2.6e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP++aI+g++elL+ ++
CP001701_1 697 AKSEFLANMSHEIRTPMNAILGFCELLQG---------IIDDPRS-- 732

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl++i ++++ ll+Lind+Ldls+i++g
CP001701_1 733 ----------RSYLNSIASSGKILLALINDILDLSKIDSG 762

CP001701_1325: domain 1 of 1, from 1157 to 1223: score 91.8, E = 1.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHELRTPL+aI+g+++lL + dt ls+ +
CP001701_1 1157 SKSIFLANMSHELRTPLNAILGFTQLLGR--------DTSLSAYH-- 1193

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l++i r++e+ll Li+d+Ldls+ie+g
CP001701_1 1194 ----------QERLQIINRSGEHLLGLIDDILDLSKIETG 1223

CP001701_1444: domain 1 of 1, from 261 to 326: score 91.5, E = 1.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ef+a++ HE+RTPL+a+ g++ lLl+ t+l+++q
CP001701_1 261 AKNEFMAMIGHEIRTPLNAVTGMTGLLLD---------TPLNPQQ-- 296

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++++i++++e ll +in++Ld+s+iea+
CP001701_1 297 ----------EEFVNIIRSSGENLLTMINNILDFSKIEAQ 326

CP001701_2133: domain 1 of 1, from 362 to 427: score 91.4, E = 1.6e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTPL+aI+g+++lL++ ++ +
CP001701_2 362 AKSEFLANMSHEIRTPLNAIIGFSDLLQT---------LVRDYKS-- 397

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl++i ++++ ll+Lind+Ldls+iea+
CP001701_2 398 ----------RSYLRSIVSSGHTLLALINDILDLSKIEAN 427

CP001701_2050: domain 1 of 1, from 332 to 399: score 88.2, E = 1.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fla+ HELRTPL++I+g++ l l+++ ++ s eq
CP001701_2 332 LKSDFLASTTHELRTPLNGIIGFLRLVLDGM-------ADDSQEQ-- 369

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le ++++a +ll+Lind+Ld+++ieag
CP001701_2 370 ----------QEFLEEAHKSALHLLNLINDILDIAKIEAG 399

CP001701_2694: domain 1 of 1, from 385 to 456: score 84.8, E = 1.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ksefl+n+sHELRTPLt I+g++ +Ll ++ a++ l+ +++
CP001701_2 385 SKSEFLSNMSHELRTPLTCIIGLSGTLLHWS----AQSKSLPLQKQ- 426

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ti++++++ll++in++L++s++eag
CP001701_2 427 ----------QQYLQTIQDSGKHLLEMINEILEYSKLEAG 456

CP001701_1669: domain 1 of 1, from 1075 to 1157: score 83.4, E = 2.8e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldk.....v.lagdtel
k++fla++sHELRTPLt+++g+a l+l++l++ + v + +++
CP001701_1 1075 IKNDFLATVSHELRTPLTSVLGFAALILDKLNRvifpwVaIGDQPTQ 1121

seeqrlpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ q+ +r le+i e+erl +Lind+Ld+++ie+g
CP001701_1 1122 KAIQQ----------VRNNLEIIVAESERLTSLINDVLDIAKIESG 1157

CP001701_3235: domain 1 of 1, from 393 to 460: score 78.0, E = 9.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksefla+ sHELRTPL++I+g +++L+e++ s e+
CP001701_3 393 LKSEFLATTSHELRTPLNGIIGCLHILKEGY--------CDSKEEE- 430

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+ ++++a +ll +i+d+Ldl++ieag
CP001701_3 431 ----------LEFLQQAEQAAVHLLGIIDDVLDLAKIEAG 460

CP001701_3567: domain 1 of 1, from 207 to 274: score 76.7, E = 2.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELR+P++ I+++++++l+ ++e++++ +
CP001701_3 207 SLKQFTADASHELRNPIAIIQTNVQMALA--------YPEADPQLQ- 244

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++++r ++rl +L+ndlL l+r ++g
CP001701_3 245 ----------QRQLRVVERLTQRLGNLVNDLLFLARSDSG 274

CP001701_4224: domain 1 of 1, from 351 to 419: score 73.8, E = 1.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f++n+sHE+RTPLt +++ +e Ll+++ ++ls+ q
CP001701_4 351 AKTVFFSNVSHEFRTPLTLMLAPLEDLLADGA------DPLSPTQ-- 389

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ le+++r + rll+L+n lLd+srieag
CP001701_4 390 ----------RDRLEIAQRNSLRLLKLVNTLLDFSRIEAG 419

CP001701_4110: domain 1 of 1, from 351 to 419: score 73.8, E = 1.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla +sHEL+ PLta+ g+++lL e ++ +el+ q
CP001701_4 351 LKDEFLACISHELKSPLTAVVGLSSLLGE------QKVGELNTRQ-- 389

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y e i+r++++l L+ndlLdl+r+e+g
CP001701_4 390 ----------VHYAELIYRSGRQLMTLVNDLLDLTRLETG 419

CP001701_2545: domain 1 of 1, from 180 to 244: score 70.9, E = 1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++l HELRTPLtaI++ ae+L++ l ++
CP001701_2 180 SRDRAFSDLTHELRTPLTAISLVAETLQN----------RLENPE-- 214

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ +l+e++rl +L++d Ldls+++++
CP001701_2 215 ----------RRWINQLLSETQRLIKLVEDWLDLSQLGEN 244

CP001701_0479: domain 1 of 1, from 435 to 502: score 70.4, E = 1.4e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s ++a HELRTPL++I+ +e L + ++++s+e r
CP001701_0 435 TRSNLVAITGHELRTPLSTIQVCLESLAT--------EPDMSPELR- 472

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+t+l++aer+++L++d+L+ls++e+g
CP001701_0 473 ----------QVMLNTALQDAERMRKLVQDFLTLSQLESG 502

CP001701_2047: domain 1 of 1, from 395 to 461: score 69.2, E = 3.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+e+l+ + HE+RTPLt I+g+++lL + d +l+++q
CP001701_2 395 SKNELLSQIGHEFRTPLTIILGFIDLLDR--------DRTLNPQQ-- 431

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l +++r++e+ll+L ++L++sr+e+
CP001701_2 432 ----------QENLAIMRRSGEYLLSLFAEILEISRLETH 461

CP001701_4076: domain 1 of 1, from 210 to 277: score 69.1, E = 3.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELR PLtaI++ ae+L++ + + l+ e+
CP001701_4 210 QLKQFTADASHELRSPLTAIKTSAEILQTHG-------DRLPRED-- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+il+++e++++L++dlL l+r++
CP001701_4 248 ----------LSKVEIILSATEQMSELVEDLLLLARMDGK 277

CP001701_0474: domain 1 of 1, from 144 to 208: score 66.5, E = 1.8e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e+++++ HELRTPLt++rgy+e L +++ e s+e
CP001701_0 144 RRRELVSDMTHELRTPLTVVRGYLEELADNS-------IEPSPEL-- 181

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +e++rl+rLi+dl +ls++eag
CP001701_0 182 -------------YLKLVKETRRLERLIQDLQELSKAEAG 208

CP001701_2382: domain 1 of 1, from 223 to 290: score 66.3, E = 2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HELRTPL+aIr+++e l+ t e
CP001701_2 223 QIQQFTADAAHELRTPLAAIRATVESTLM---------TSTLVEA-- 258

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+r let+ r+++rl+ L+ dlL lsr++ +
CP001701_2 259 --------EVRNTLETLARQTQRLSTLVADLLMLSRLDCQ 290

CP001701_2482: domain 1 of 1, from 284 to 347: score 65.5, E = 3.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ fl ++ HELRTP+t Irg++el+ + + +q
CP001701_2 284 SQQNFLNDAGHELRTPITIIRGHLELMGD-----------DPQDQ-- 317

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++ +l+e++r+ rL++dl l+++e +
CP001701_2 318 ----------QETISLVLDELDRMARLVDDLSLLAKAERP 347

CP001701_1463: domain 1 of 1, from 162 to 230: score 64.4, E = 7.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksef+++lsH++R+P+++I++ a lL++ + + l+ eq+
CP001701_1 162 LKSEFVSMLSHDFRNPMNTILLSAGLLEDSG-------DQLTREQQ- 200

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++ i+ +++ +++L++++L l +++ag
CP001701_1 201 ----------ISYFQMIRTAIKDMDQLLSEILLLGKADAG 230

CP001701_1388: domain 1 of 1, from 199 to 266: score 60.2, E = 1.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELR PLtaI++ +e++++ + + +++
CP001701_1 199 QLKQFTADASHELRGPLTAIKASIEVMQN-------HPERIHPKD-- 236

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l i ++++++ +L++dlL l+r e
CP001701_1 237 ----------VRKLGAIASATNQMAHLVQDLLFLARTEGA 266

CP001701_3324: domain 1 of 1, from 27 to 94: score 51.6, E = 3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fl sHELR PL++++g+ +l+l +l s+e++
CP001701_3 27 FKSGFLVKTSHELRSPLSSLMGLHQLILSDL--------CESPEEQ- 64

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++ ++++a+ l ++i+++++ s+ie g
CP001701_3 65 ----------REFIAEAYQAAQKLMNMIDEIMTVSKIEYG 94

CP001701_1874: domain 1 of 1, from 131 to 199: score 51.4, E = 3.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+++l H+L+TPL + + +++ + +l+ + +++q
CP001701_1 131 MREDFVSTLTHDLKTPLLGAIETLKSFELGLF------GQITPKQ-- 169

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le ++r+ ++ l+L++ +Ld+ r +++
CP001701_1 170 ----------KKILEMMIRSHQSTLQLVETVLDIYRNDNE 199

CP001701_3971: domain 1 of 1, from 529 to 597: score 44.9, E = 2.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ +sH+L PL+ ++ y++lL++++ +e +e++
CP001701_3 529 ELKKFAYVASHDLQEPLNQVSNYVQLLEMRY-------GESLDEDA- 567

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++ + + + ++ Li+d+L +s+ +
CP001701_3 568 ----------SEFINFAVEGVSLMQTLIDDVLAYSKVDMR 597

CP001701_1282: domain 1 of 1, from 162 to 234: score 42.3, E = 1.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++ la+l+H+LR PLta + ++e+L+ +++ + +r+
CP001701_1 162 FKDQVLAMLAHDLRSPLTAASIAVETLEL--------TQKQEDTERR 200

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
LR +++ + ++++ + ++rLi d+L+ s+ +
CP001701_1 201 AQLR------EQLYHQARKQFRVMNRLITDILQASKTMTA 234

CP001701_0952: domain 1 of 1, from 239 to 297: score 41.8, E = 1.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +fl+ l EL PLt+++g++++L+ e++ + ls++q
CP001701_0 239 IKLKFLRQLVEELQAPLTSVIGMSSVLRSEVF------GSLSPKQ-- 277

peLRledpeyreyletilreaerllrLind<-*
+ey+++i+ +++++++L+ +
CP001701_0 278 ----------KEYVDIIHTSGQQMSSLVHE 297

CP001701_3953: domain 1 of 1, from 246 to 312: score 41.2, E = 2.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++fl +l+ EL TPLt I++++ lL+ e r
CP001701_3 246 LNEDFLNALARELSTPLTNIKTALRLLES---------MQHKREPR- 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++ i+ e +r ++Lin l dl+++ +
CP001701_3 283 ----------QRYINLIKGECDRQNSLINGLQDLAQLNHR 312

CP001701_2548: domain 1 of 1, from 700 to 767: score 38.7, E = 1.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++++++H+L++ Lt ++ ++lL+ ++ ++l+e +
CP001701_2 700 SIGTLASGIAHDLNNILTPLLSISQLLQLKY-------SNLDEST-- 737

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+++ ++r +++ +lL +s +
CP001701_2 738 ----------LRLLQILTINTQRGANIVKQLLLFSSSTET 767

CP001701_2942: domain 1 of 1, from 181 to 236: score 34.4, E = 2.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++ l +l H+LR+PLta+r +++lLl+ + + +e+
CP001701_2 181 QERDRLDDLFHQLRNPLTALRIFSKLLLK--------RLKSDEKS-- 217

peLRledpeyreyletilreaerllrLin<-*
r ++++i+re+++l++Li+
CP001701_2 218 ----------RSIVDSIIRESDHLQELIQ 236

CP001701_4227: domain 1 of 1, from 939 to 1010: score 34.3, E = 2.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL I g++ +L+ + ++ +
CP001701_4 939 ELDSFCYSVSHDLRAPLRHIHGFVNALKQ---------QLMTNNT-- 974

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
edp + yl++i+++++ + +Li+ lL+lsr +
CP001701_4 975 ----FEDPKVLHYLDVIENSSQKMAHLIDGLLTLSRVGRR 1010

CP001701_1288: domain 1 of 1, from 220 to 286: score 30.6, E = 2.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
s + +s + R+PL++I++ + +L++ s+e +
CP001701_1 220 LISNIITIMSDQTRNPLASIKMGLTMLRK---------KQFSPEVL- 256

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+++++e + l+++ + +L+l ++
CP001701_1 257 ----------EQRLDILEQEWQKLNEINEKILQLKLVKSE 286

CP001701_1452: domain 1 of 1, from 148 to 216: score 30.0, E = 3.9e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f +sH+L + L+ I + lL e++ +l+e+
CP001701_1 148 DLKAFSYRISHDLCNHLNIINNSTYLLIEKYA------KKLDEKA-- 186

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ +++e+ r++++i+dlL ls+ +
CP001701_1 187 ----------KSYLNLLEEEGLRMQQIIEDLLRLSQSQYI 216

CP001701_3620: domain 1 of 1, from 276 to 318: score 29.8, E = 4.5e-08
*->flanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLR
+l +l HE+RTPLt+Ir+++ lLl++ el+++
CP001701_3 276 LLQALTHEIRTPLTTIRTMTRLLLRN--------KELTPQM------ 308

ledpeyreyletilre<-*
++leti++e
CP001701_3 309 ------VKLLETIDQE 318


Histogram of all scores:
score obs exp (one = represents 13 sequences)
----- --- ---
-15 6 0|=
-14 24 0|==
-13 85 3|*======
-12 249 98|=======*============
-11 490 512|====================================== *
-10 740 950|========================================================= *
-9 747 981|==========================================================*
-8 653 734|=================================================== *
-7 497 462|===================================*===
-6 286 266|====================*=
-5 221 146|===========*=====
-4 114 78|=====*===
-3 77 41|===*==
-2 35 21|=*=
-1 22 11|*=
0 14 5|*=
1 9 3|*
2 1 1|*
3 4 0|=
4 4 0|=
5 2 0|=
6 0 0|
7 0 0|
> 8 40 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 459.7391
P(chi-square) = 0

Total sequences searched: 4320

Whole sequence top hits:
tophits_s report:
Total hits: 37
Satisfying E cutoff: 37
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 37
Satisfying E cutoff: 37
Total memory: 35K


Acknowledgements:

This research is funded by:

Developed by: