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Classification of phyla is from NCBI page
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4 accessions found for Candidatus Accumulibacter phosphatis clade IIA str. UW-1  

Data for CP001715  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001715.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001715_2740 CDS_3285075-3282421 96.3 6.4e-27 1
CP001715_2513 CDS_2993907-2997266 95.7 9.4e-27 1
CP001715_1067 CDS_1270357-1268603 95.2 1.3e-26 1
CP001715_2697 CDS_3230942-3233335 94.5 2.1e-26 1
CP001715_3124 CDS_3715395-3713266 94.2 2.5e-26 1
CP001715_1778 CDS_2091974-2089929 93.3 4.4e-26 1
CP001715_0947 CDS_1133400-1137287 90.3 3.3e-25 1
CP001715_2139 CDS_2519838-2522345 88.7 8.8e-25 1
CP001715_2514 CDS_2997263-2999632 87.7 1.7e-24 1
CP001715_2517 CDS_3001591-3005007 87.5 2e-24 1
CP001715_2674 CDS_3198949-3202173 86.6 3.5e-24 1
CP001715_1918 CDS_2249186-2250496 83.1 3.6e-23 1
CP001715_3035 CDS_3616810-3614054 81.2 1.2e-22 1
CP001715_0380 CDS_473682-475106 70.1 1.7e-19 1
CP001715_0737 CDS_887010-888602 67.3 1e-18 1
CP001715_1774 CDS_2084594-2086030 64.4 7.2e-18 1
CP001715_2710 CDS_3249729-3251132 60.5 8.9e-17 1
CP001715_0131 CDS_175980-174541 59.9 1.3e-16 1
CP001715_0228 CDS_302057-300951 59.3 1.9e-16 1
CP001715_1136 CDS_1352907-1351591 59.2 2.1e-16 1
CP001715_1619 CDS_1909691-1906998 58.8 2.7e-16 1
CP001715_0048 CDS_54613-56766 57.8 5e-16 1
CP001715_3674 CDS_4345329-4344151 56.6 1.2e-15 1
CP001715_0935 CDS_1116961-1118337 54.7 3.9e-15 1
CP001715_1616 CDS_1902892-1904421 51.4 3.5e-14 1
CP001715_2024 CDS_2371395-2369380 48.3 2.5e-13 1
CP001715_2883 CDS_3434584-3433076 47.3 4.8e-13 1
CP001715_2475 CDS_2955361-2953724 41.9 1.7e-11 1
CP001715_2888 CDS_3438220-3439629 38.0 2.2e-10 1
CP001715_3191 CDS_3797398-3798690 37.5 3e-10 1
CP001715_1677 CDS_1973207-1971624 36.2 6.8e-10 1
CP001715_3320 CDS_3952437-3949399 35.8 8.9e-10 1
CP001715_0007 CDS_8309-9679 32.7 6.8e-09 1
CP001715_1536 CDS_1811563-1810253 29.0 7.6e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001715_2740 1/1 362 427 .. 1 87 [] 96.3 6.4e-27
CP001715_2513 1/1 741 807 .. 1 87 [] 95.7 9.4e-27
CP001715_1067 1/1 215 280 .. 1 87 [] 95.2 1.3e-26
CP001715_2697 1/1 269 334 .. 1 87 [] 94.5 2.1e-26
CP001715_3124 1/1 235 301 .. 1 87 [] 94.2 2.5e-26
CP001715_1778 1/1 301 366 .. 1 87 [] 93.3 4.4e-26
CP001715_0947 1/1 793 858 .. 1 87 [] 90.3 3.3e-25
CP001715_2139 1/1 467 532 .. 1 87 [] 88.7 8.8e-25
CP001715_2514 1/1 541 609 .. 1 87 [] 87.7 1.7e-24
CP001715_2517 1/1 736 804 .. 1 87 [] 87.5 2e-24
CP001715_2674 1/1 455 520 .. 1 87 [] 86.6 3.5e-24
CP001715_1918 1/1 209 276 .. 1 87 [] 83.1 3.6e-23
CP001715_3035 1/1 683 750 .. 1 87 [] 81.2 1.2e-22
CP001715_0380 1/1 230 295 .. 1 87 [] 70.1 1.7e-19
CP001715_0737 1/1 314 379 .. 1 87 [] 67.3 1e-18
CP001715_1774 1/1 255 320 .. 1 87 [] 64.4 7.2e-18
CP001715_2710 1/1 241 306 .. 1 87 [] 60.5 8.9e-17
CP001715_0131 1/1 245 311 .. 1 87 [] 59.9 1.3e-16
CP001715_0228 1/1 142 207 .. 1 87 [] 59.3 1.9e-16
CP001715_1136 1/1 216 281 .. 1 87 [] 59.2 2.1e-16
CP001715_1619 1/1 665 732 .. 1 87 [] 58.8 2.7e-16
CP001715_0048 1/1 484 556 .. 1 87 [] 57.8 5e-16
CP001715_3674 1/1 172 238 .. 1 87 [] 56.6 1.2e-15
CP001715_0935 1/1 238 303 .. 1 87 [] 54.7 3.9e-15
CP001715_1616 1/1 279 346 .. 1 87 [] 51.4 3.5e-14
CP001715_2024 1/1 448 518 .. 1 87 [] 48.3 2.5e-13
CP001715_2883 1/1 277 344 .. 1 87 [] 47.3 4.8e-13
CP001715_2475 1/1 319 387 .. 1 87 [] 41.9 1.7e-11
CP001715_2888 1/1 244 306 .. 1 81 [. 38.0 2.2e-10
CP001715_3191 1/1 234 298 .. 1 87 [] 37.5 3e-10
CP001715_1677 1/1 302 371 .. 1 87 [] 36.2 6.8e-10
CP001715_3320 1/1 749 818 .. 1 87 [] 35.8 8.9e-10
CP001715_0007 1/1 230 288 .. 1 79 [. 32.7 6.8e-09
CP001715_1536 1/1 227 285 .. 1 87 [] 29.0 7.6e-08

Alignments of top-scoring domains:
CP001715_2740: domain 1 of 1, from 362 to 427: score 96.3, E = 6.4e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fl+n+sHE+RTPL++I+g+ae+L++ t+l+ eq
CP001715_2 362 AKSQFLSNMSHEIRTPLNGILGMAEVLER---------TPLNNEQ-- 397

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ i ++++ l L+ d+Ldl++ieag
CP001715_2 398 ----------ARYLRAISSAGQALHGLLGDILDLAKIEAG 427

CP001715_2513: domain 1 of 1, from 741 to 807: score 95.7, E = 9.4e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+++sHELRTP++aI+g+a++L+ d+els++q
CP001715_2 741 AKSEFLSSMSHELRTPMNAIIGFAQMLEY--------DGELSADQ-- 777

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ il+++++ll+Lin++Ldl+rie+g
CP001715_2 778 ----------HDSVHEILKASRHLLDLINEVLDLARIESG 807

CP001715_1067: domain 1 of 1, from 215 to 280: score 95.2, E = 1.3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP+++++g aelLl+ t+l e+q
CP001715_1 215 AKSQFLANMSHEIRTPMNGVLGIAELLLA---------TPLAEQQ-- 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l+t++r++++ll+ ind+Ld+s+ieag
CP001715_1 251 ----------RSRLQTLYRSGQSLLDVINDILDFSKIEAG 280

CP001715_2697: domain 1 of 1, from 269 to 334: score 94.5, E = 2.1e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP+++++g+a+lLl+ t lse+q
CP001715_2 269 AKSRFLANMSHEIRTPMNGVIGMADLLLD---------TGLSEQQ-- 304

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ et++ +ae+ll+L+n++Ldls+ie+g
CP001715_2 305 ----------RRHAETLRLSAESLLHLLNNILDLSKIESG 334

CP001715_3124: domain 1 of 1, from 235 to 301: score 94.2, E = 2.5e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fl+++ HELRTPL++++g+a+lLl+ ++l+e +r
CP001715_3 235 AKSDFLSMMGHELRTPLNGMLGMAQLLLM---------PNLTERER- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++il ++++ll L+nd+Ldls+ie+g
CP001715_3 272 ----------QDYARIILTSGQSLLTLLNDILDLSKIESG 301

CP001715_1778: domain 1 of 1, from 301 to 366: score 93.3, E = 4.4e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f++ +sHELRTPL+aI+g+a++L + ++l + +
CP001715_1 301 AKSDFVSRMSHELRTPLNAILGFAQVLDR---------EPLQASH-- 336

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++ i r++++ll+L+n++Ldl++ieag
CP001715_1 337 ----------QDYVRLIMRSGQHLLELVNQVLDLAKIEAG 366

CP001715_0947: domain 1 of 1, from 793 to 858: score 90.3, E = 3.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTPL++++g+++lLl ++ls q
CP001715_0 793 AKSAFLANMSHEIRTPLNGVIGMTDLLLG---------STLSHRQ-- 828

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l++++++++ ll ++nd+Ld+s+ieag
CP001715_0 829 ----------RAHLQIVKQSSDALLTILNDILDFSKIEAG 858

CP001715_2139: domain 1 of 1, from 467 to 532: score 88.7, E = 8.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTP+++++g aelLl+ ++l e
CP001715_2 467 AKSAFLANMSHEIRTPMNGVIGVAELLLT---------EALEERA-- 502

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y eti+r+++ ll ++d+Ldls+ieag
CP001715_2 503 ----------RHYAETIQRSGRALLGVLDDVLDLSKIEAG 532

CP001715_2514: domain 1 of 1, from 541 to 609: score 87.7, E = 1.7e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efl+ +sHELRTPL+aI+g+ +lL + +gd++ls+eq
CP001715_2 541 AKTEFLSRMSHELRTPLNAILGFGQLLAM------PGDAALSAEQ-- 579

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ ilr++++ll ++n++Ldl+r e+g
CP001715_2 580 ----------ADNVQEILRAGRHLLGQVNEVLDLARVESG 609

CP001715_2517: domain 1 of 1, from 736 to 804: score 87.5, E = 2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efl+ +sHELRTPL+aI+g+ +lL +gd++ls++q
CP001715_2 736 AKTEFLSRMSHELRTPLNAILGFGQLLAL------PGDAPLSAQQ-- 774

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ ilr++++ll+++n++Ldl+rie+g
CP001715_2 775 ----------ADNVQEILRAGRHLLEQVNEVLDLARIESG 804

CP001715_2674: domain 1 of 1, from 455 to 520: score 86.6, E = 3.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHE+RTP++aI+g+ +lL+ + +++q
CP001715_2 455 SKSAFLANMSHEIRTPMNAIIGLNHLLQQ---------EITNPKQ-- 490

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l++i ++a++ll ++nd+Ldls+ie g
CP001715_2 491 ----------RAQLNKINDAAQHLLGIVNDILDLSKIEVG 520

CP001715_1918: domain 1 of 1, from 209 to 276: score 83.1, E = 3.6e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++sef+an+sHELRTPLt+++g++e + ++++s++qr
CP001715_1 209 MRSEFVANVSHELRTPLTVVSGFLEHFAD--------EGTMSADQR- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + +++ r+l+L++dlL+lsr+ea+
CP001715_1 247 ----------LHFARLMSDQTARMLSLVDDLLTLSRLEAE 276

CP001715_3035: domain 1 of 1, from 683 to 750: score 81.2, E = 1.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++ ++++ HELRTPLt+Ir+++elL++ d+++ +r
CP001715_3 683 VKDDIMSSVTHELRTPLTSIRAFSELLRD--------DPKMHLADR- 720

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l i +eaerl+rLin+ Ldl++ie+g
CP001715_3 721 ----------ERFLGLIVSEAERLSRLINQTLDLAKIESG 750

CP001715_0380: domain 1 of 1, from 230 to 295: score 70.1, E = 1.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+a+++H++RTPLt++++ a+l+ + e ++ ++
CP001715_0 230 AQRRFIADAAHQMRTPLTGLKTQAQLAMR----------ESDPGEL- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+ il+ ++r ++L++++L l+r+ea
CP001715_0 266 ----------RHALRQILSGVDRASHLVDQMLALARAEAS 295

CP001715_0737: domain 1 of 1, from 314 to 379: score 67.3, E = 1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++an++HE+R+PL+aI+ + elL+e + ++e +
CP001715_0 314 ALGRLTANIAHEIRNPLSAISHAGELLRE---------ERRGEMH-- 349

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+++l+ a+rl+r+++d+L+l r +
CP001715_0 350 ----------ERLLRIVLDNAQRLDRIVSDVLELGRRDRA 379

CP001715_1774: domain 1 of 1, from 255 to 320: score 64.4, E = 7.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + nl+HE++ PL+aI g+ae+L+ ++++ +
CP001715_1 255 YVERYVQNLAHEMKSPLSAIVGAAEILEG---------SPADGDR-- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ ++ ++a+rl+ +i+++L l+r e+
CP001715_1 291 ----------RRFAASVSEQARRLQGIIERMLMLARVEQL 320

CP001715_2710: domain 1 of 1, from 241 to 306: score 60.5, E = 8.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e+ +++sHELRTP++ +r+++e+L te++ e
CP001715_2 241 TQKELSSAISHELRTPIARMRFALEMLAG---------TEQPCER-- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + ++r+++ l+ Li+ L+++r e +
CP001715_2 277 ----------QRLWQMMERDLDELDGLIDSSLTYARFERE 306

CP001715_0131: domain 1 of 1, from 245 to 311: score 59.9, E = 1.3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++++HELRTP+t +++ +++ l+ e+++ +
CP001715_0 245 RLTAFSSDIAHELRTPVTNLLTQTQVTLA---------KERPAGE-- 280

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y + l + +e+erl+r+i d+L l+r+++
CP001715_0 281 ---------YGDVLASNAEELERLSRMIADMLFLARADND 311

CP001715_0228: domain 1 of 1, from 142 to 207: score 59.3, E = 1.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e+++nl HE+++PL +Irg+a+lL+ el+ + +
CP001715_0 142 ANRELIRNLVHEIKNPLGGIRGAAQLLEH----------ELNNPGL- 177

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey+++i++ea+rl++L ++lL r ++
CP001715_0 178 ----------REYTQVIIKEADRLQDLMRRLLSPHRPMQP 207

CP001715_1136: domain 1 of 1, from 216 to 281: score 59.2, E = 2.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ef+a+++HELRTPL+a+++ ++l+++ ++ +
CP001715_1 216 AQREFIADAAHELRTPLAALSLQLQLAER---------ATDAAAR-- 251

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++r +er + +++lL+l+r e g
CP001715_1 252 ----------GDAFGELERGLERATHCVQQLLTLARQEPG 281

CP001715_1619: domain 1 of 1, from 665 to 732: score 58.8, E = 2.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +l+++sH+LRTPL+++ g+ae ++ t ++ +++
CP001715_1 665 LRNSLLSAISHDLRTPLSVLVGLAESIRL---------TQPPPTDAQ 702

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + t+++ea r++ +n lLd++r++ag
CP001715_1 703 ----------ATIAATLKEEALRMSTKVNSLLDMARLQAG 732

CP001715_0048: domain 1 of 1, from 484 to 556: score 57.8, E = 5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e ++ l+HE+++PLt I++ ae L+++l a + + + q+l
CP001715_0 484 AWGEVARRLAHEIKNPLTPIQLSAERLQMKL----ADRLAGADAQML 526

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ti+ +++ + r++nd+ d++r+ a+
CP001715_0 527 ----------ARSTQTIITQVQAMKRMVNDFSDYARLPAP 556

CP001715_3674: domain 1 of 1, from 172 to 238: score 56.6, E = 1.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++a+l+H+LRTPL++ ++y+ L ++l++ r
CP001715_3 172 AMGEMAASLAHQLRTPLATALLYSANLCQ---------PDLDDAAR- 208

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +++rl+rLi+++L ++r e+
CP001715_3 209 ----------VRFAGKTAAQLKRLERLIQEVLLFARGESI 238

CP001715_0935: domain 1 of 1, from 238 to 303: score 54.7, E = 3.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HELRTPL+ ++ a++++ ++ +
CP001715_0 238 SERRFTADAAHELRTPLAIVKIQAQVAQL---------SPDANDR-- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ i a+r r +++lL l+r++
CP001715_0 274 ----------QHALRQIVAGADRATRVLEQLLRLARLDPL 303

CP001715_1616: domain 1 of 1, from 279 to 346: score 51.4, E = 3.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ l++lsH+LRTPLt++ g+a++L ++ ++l+e +
CP001715_1 279 LRTSILSSLSHDLRTPLTSLVGLADTLVHRQ-------PALDEGAI- 317

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +i+++a+ + +L ++lL+++r++ag
CP001715_1 318 -----------ETAAIIRDQAHAMHHLMSNLLEMARLQAG 346

CP001715_2024: domain 1 of 1, from 448 to 518: score 48.3, E = 2.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++++l+HEL++PL+aI y +l++l+ +++ ++ q
CP001715_2 448 TMGEMASTLAHELNQPLAAITSYNAGCLNKLE-----SGNFNAGQ-- 487

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++e+l ++ +a+r ++i+++ d+ r ++
CP001715_2 488 ---------FKEALGKLAVQAQRAGHIIRRVHDFVRKSEP 518

CP001715_2883: domain 1 of 1, from 277 to 344: score 47.3, E = 4.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+e++a+++H+LRTPLta+ g++e+L ++ + + qr
CP001715_2 277 DHREMMAGVAHDLRTPLTALHGHLEALAG--------RGLAESGQR- 314

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l +l +++ + L ++l +l+ +++
CP001715_2 315 ----------ERVLAAALAQSDKVRLLSQQLFELAALQST 344

CP001715_2475: domain 1 of 1, from 319 to 387: score 41.9, E = 1.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f ++sH+LR+PL I+ y++lL l + l++e
CP001715_2 319 ELEQFSYAISHDLRQPLRMISSYLQLLGISLG------DGLDAEC-- 357

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey+ +++ a+rl+r++ lL++sr +
CP001715_2 358 ----------REYFGFAIDGAKRLDRMLVALLEYSRVGRL 387

CP001715_2888: domain 1 of 1, from 244 to 306: score 38.0, E = 2.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ l+++sHEL+TPLta+r + lL+e++ ++l q
CP001715_2 244 DRERTLRHVSHELKTPLTALREGIALLQEQV------LGPLEGAQ-- 282

peLRledpeyreyletilreaerllrLindlLdl<-*
+e ++++++ + l+ i+ lL l
CP001715_2 283 ----------QEVVDILQHNVMALQGHIESLLRL 306

CP001715_3191: domain 1 of 1, from 234 to 298: score 37.5, E = 3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f+a+++H LRTPL++I + + ++l+ e++++
CP001715_3 234 HERAFTAHAAHSLRTPLAGIDAQLAVALR----------ECPAQL-- 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++++++a rl+r + lL+l r +
CP001715_3 269 ----------QPRLQRVRSAAARLQRVVTALLTLFRSGVD 298

CP001715_1677: domain 1 of 1, from 302 to 371: score 36.2, E = 6.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++ +lsHEL +PLta+++ya + + l+ +e +e
CP001715_1 302 AAGEMAGALSHELHQPLTALLMYARAGQH-----LLAAGETGERL-- 341

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ + +++ e++r + +++l+d+ r ++
CP001715_1 342 ----------RDVIARVEAESQRAADVVSRLRDFFRTGTT 371

CP001715_3320: domain 1 of 1, from 749 to 818: score 35.8, E = 8.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++ +++H++++ L aI+g++ l ++ l +++ ++e +
CP001715_3 749 VMGAMAGGVAHDFNNILVAILGFSGLGKTVL------RAAGGPERV- 788

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+e i+ ++er ++L+++lL +sr ++
CP001715_3 789 ----------VSYFEEIEIAGERARALVQQLLVFSRGGSL 818

CP001715_0007: domain 1 of 1, from 230 to 288: score 32.7, E = 6.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++a+++H+L TPL ++ + L+ ++ +++++
CP001715_0 230 ALGTLAAGAAHQLGTPLGTMAIVIRELQL---------SHENDPEI- 266

peLRledpeyreyletilreaerllrLindlL<-*
re l ++++++r+ + i+++L
CP001715_0 267 ----------REDLTLLREQVDRCKQTISQIL 288

CP001715_1536: domain 1 of 1, from 227 to 285: score 29.0, E = 7.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e+la+l H+LR PL+ +r+ + lL + +
CP001715_1 227 ERREMLAGLTHDLRAPLARLRLRLALLDS-------------DTE-- 258

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
i ++++ ++r++ + L++ r e+
CP001715_1 259 -------------RAGIAHDLDDMERIVGQCLQFLRSEEA 285


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-15 1 0|=
-14 10 0|=
-13 51 3|*===
-12 155 98|======*=====
-11 337 512|========================= *
-10 659 951|================================================ *
-9 797 982|========================================================= *
-8 728 735|====================================================*
-7 607 463|=================================*==========
-6 385 266|==================*=========
-5 255 146|==========*========
-4 127 78|=====*====
-3 72 41|==*===
-2 33 21|=*=
-1 36 11|*==
0 13 5|*
1 6 3|*
2 4 1|*
3 0 0|
4 0 0|
5 1 0|=
6 1 0|=
> 7 48 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 515.3292
P(chi-square) = 0

Total sequences searched: 4326

Whole sequence top hits:
tophits_s report:
Total hits: 34
Satisfying E cutoff: 34
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 34
Satisfying E cutoff: 34
Total memory: 34K


Acknowledgements:

This research is funded by:

Developed by: