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7 accessions found for Haloterrigena turkmenica DSM 5511  

Data for CP001860  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP001860.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP001860_1957 CDS_2042349-2044277 70.6 1.1e-19 1
CP001860_2485 CDS_2579742-2581625 65.6 2.7e-18 1
CP001860_2495 CDS_2593219-2594991 63.6 9.9e-18 1
CP001860_3300 CDS_3443075-3441018 61.9 3.2e-17 1
CP001860_1074 CDS_1135417-1132496 59.7 1.3e-16 1
CP001860_2746 CDS_2847975-2849582 59.3 1.7e-16 1
CP001860_2032 CDS_2119965-2118481 58.2 3.5e-16 1
CP001860_2875 CDS_2980762-2982324 57.7 4.6e-16 1
CP001860_3619 CDS_3767082-3768533 55.9 1.5e-15 1
CP001860_1865 CDS_1958639-1956984 54.5 3.8e-15 1
CP001860_3260 CDS_3391981-3394083 54.0 5.3e-15 1
CP001860_2879 CDS_2984976-2986904 53.5 7.3e-15 1
CP001860_1709 CDS_1794729-1793506 53.4 7.7e-15 1
CP001860_0209 CDS_228498-230138 52.6 1.4e-14 1
CP001860_2259 CDS_2351399-2348934 52.4 1.5e-14 1
CP001860_1012 CDS_1053596-1056478 52.0 1.9e-14 1
CP001860_2965 CDS_3083414-3082239 52.0 2e-14 1
CP001860_2797 CDS_2903609-2900415 51.6 2.5e-14 1
CP001860_0255 CDS_276049-274472 50.9 3.9e-14 1
CP001860_3398 CDS_3541736-3542824 50.3 6e-14 1
CP001860_2194 CDS_2294316-2291884 49.7 8.6e-14 1
CP001860_2336 CDS_2427056-2429359 49.7 8.6e-14 1
CP001860_0900 CDS_927977-924390 47.7 3.3e-13 1
CP001860_0516 CDS_550973-555571 47.1 4.7e-13 1
CP001860_3114 CDS_3240288-3239062 46.6 6.5e-13 1
CP001860_3386 CDS_3531331-3529979 46.6 6.9e-13 1
CP001860_0963 CDS_995866-998055 46.2 8.8e-13 1
CP001860_0270 CDS_291809-289929 46.1 9e-13 1
CP001860_2904 CDS_3011993-3009969 46.1 9.3e-13 1
CP001860_1071 CDS_1130769-1127383 45.6 1.3e-12 1
CP001860_2271 CDS_2364339-2361958 44.7 2.3e-12 1
CP001860_2570 CDS_2667684-2663605 41.8 1.5e-11 1
CP001860_3449 CDS_3590689-3589601 40.3 4e-11 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP001860_1957 1/1 362 423 .. 1 87 [] 70.6 1.1e-19
CP001860_2485 1/1 399 472 .. 1 87 [] 65.6 2.7e-18
CP001860_2495 1/1 354 415 .. 1 87 [] 63.6 9.9e-18
CP001860_3300 1/1 407 470 .. 1 87 [] 61.9 3.2e-17
CP001860_1074 1/1 751 819 .. 1 87 [] 59.7 1.3e-16
CP001860_2746 1/1 293 361 .. 1 87 [] 59.3 1.7e-16
CP001860_2032 1/1 271 339 .. 1 87 [] 58.2 3.5e-16
CP001860_2875 1/1 288 356 .. 1 87 [] 57.7 4.6e-16
CP001860_3619 1/1 237 298 .. 1 87 [] 55.9 1.5e-15
CP001860_1865 1/1 285 353 .. 1 87 [] 54.5 3.8e-15
CP001860_3260 1/1 481 547 .. 1 87 [] 54.0 5.3e-15
CP001860_2879 1/1 417 485 .. 1 87 [] 53.5 7.3e-15
CP001860_1709 1/1 171 239 .. 1 87 [] 53.4 7.7e-15
CP001860_0209 1/1 323 384 .. 1 87 [] 52.6 1.4e-14
CP001860_2259 1/1 600 668 .. 1 87 [] 52.4 1.5e-14
CP001860_1012 1/1 735 803 .. 1 87 [] 52.0 1.9e-14
CP001860_2965 1/1 153 221 .. 1 87 [] 52.0 2e-14
CP001860_2797 1/1 817 885 .. 1 87 [] 51.6 2.5e-14
CP001860_0255 1/1 301 369 .. 1 87 [] 50.9 3.9e-14
CP001860_3398 1/1 140 208 .. 1 87 [] 50.3 6e-14
CP001860_2194 1/1 583 651 .. 1 87 [] 49.7 8.6e-14
CP001860_2336 1/1 545 613 .. 1 87 [] 49.7 8.6e-14
CP001860_0900 1/1 974 1042 .. 1 87 [] 47.7 3.3e-13
CP001860_0516 1/1 1310 1378 .. 1 87 [] 47.1 4.7e-13
CP001860_3114 1/1 174 242 .. 1 87 [] 46.6 6.5e-13
CP001860_3386 1/1 178 246 .. 1 87 [] 46.6 6.9e-13
CP001860_0963 1/1 490 558 .. 1 87 [] 46.2 8.8e-13
CP001860_0270 1/1 405 473 .. 1 87 [] 46.1 9e-13
CP001860_2904 1/1 449 517 .. 1 87 [] 46.1 9.3e-13
CP001860_1071 1/1 906 974 .. 1 87 [] 45.6 1.3e-12
CP001860_2271 1/1 573 641 .. 1 87 [] 44.7 2.3e-12
CP001860_2570 1/1 1140 1208 .. 1 87 [] 41.8 1.5e-11
CP001860_3449 1/1 150 211 .. 1 87 [] 40.3 4e-11

Alignments of top-scoring domains:
CP001860_1957: domain 1 of 1, from 362 to 423: score 70.6, E = 1.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ef++ +sH+LR+PLt+ +gy+elL+e e ++e+
CP001860_1 362 KLDEFASVVSHDLRNPLTVSKGYLELLEE----------EYDPEH-- 396

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ti r+ er+++Li+d+L+l+r ++
CP001860_1 397 -------------VRTIARSHERMEELIDDVLTLARQGQA 423

CP001860_2485: domain 1 of 1, from 399 to 472: score 65.6, E = 2.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
++++f++++sH+LR+PL++ gy +lL+ k+ a++++ + e++
CP001860_2 399 RLDQFASTVSHDLRNPLNVADGYRDLLES---KLaDAESEDVDLEEL 442

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey +i+++ r++ +i+d+L l+r e+
CP001860_2 443 -----------REYATRIDESHARMETIIDDVLALAREENT 472

CP001860_2495: domain 1 of 1, from 354 to 415: score 63.6, E = 9.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+LR+PL++ gy+el++e ++
CP001860_2 354 RLERFADLVSHDLRNPLNVADGYLELARE-------------TDD-- 385

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl+ i+r+ +r+ +i+d+L l+r +a
CP001860_2 386 ----------EEYLDEIERSHDRMATIIDDVLALAREGAD 415

CP001860_3300: domain 1 of 1, from 407 to 470: score 61.9, E = 3.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef++ +sH+LR+PL++ rg++el e + +q
CP001860_3 407 RLEEFASVVSHDLRNPLNVARGTLELHAE------------DCPQS- 440

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +e+++ +++r+++Li++lL l+r +
CP001860_3 441 ----------GESIERVRWSLQRMDDLIDRLLSLARHGRT 470

CP001860_1074: domain 1 of 1, from 751 to 819: score 59.7, E = 1.3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ ++sH+L PL ++ y++lL +++ +el+ee
CP001860_1 751 RLKQFAYAASHDLQEPLRMVSSYLQLLDNRYK------GELDEEA-- 789

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ + + a+r++++i+dlL +sr e+
CP001860_1 790 ----------REFIDFAVDGADRMREMIDDLLAFSRVEHA 819

CP001860_2746: domain 1 of 1, from 293 to 361: score 59.3, E = 1.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL ++ y++lL++++ ++el+e+
CP001860_2 293 RLEQFAYAVSHDLQEPLRMVSSYLQLLEDRY------RDELDEDA-- 331

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ + + aer++++i++lL++sr +
CP001860_2 332 ----------EEFIDYAVDGAERMRAMIENLLEYSRVTTR 361

CP001860_2032: domain 1 of 1, from 271 to 339: score 58.2, E = 3.5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ +sH+L PL ++ y++lL++++ ++ l+++
CP001860_2 271 QLKRFAYIASHDLQEPLRMVSSYLQLLERNY------RDGLDADA-- 309

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey++ + a+r++++i+ lL++srie+g
CP001860_2 310 ----------REYIDFAVGGADRMREMIDGLLEFSRIETG 339

CP001860_2875: domain 1 of 1, from 288 to 356: score 57.7, E = 4.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL I+ y++lL++++ +el++e
CP001860_2 288 RLEQFAYAASHDLQEPLRMISSYLQLLENRYA------DELDAEA-- 326

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ + + a+r++ +i+ lLd+sr + +
CP001860_2 327 ----------REFIDFAVDGADRMRGMIDALLDYSRVDKE 356

CP001860_3619: domain 1 of 1, from 237 to 298: score 55.9, E = 1.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+LR+PL++ gy+el+ e +
CP001860_3 237 DLQDFANIVSHDLRNPLSVAEGYLELAVE-------------TGD-- 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey++ i+++ +r++r+i+ L+l+r ++g
CP001860_3 269 ----------EEYVREIKDAHKRIDRIIEHTLTLARQGQG 298

CP001860_1865: domain 1 of 1, from 285 to 353: score 54.5, E = 3.8e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL ++ y+el+++++ + l+++
CP001860_1 285 RLEQFAYAVSHDLQEPLRMVSSYLELIEDRYA------DGLDADG-- 323

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ + + a+r++++i+ lL++sr e++
CP001860_1 324 ----------EEFIDYAVDGADRMREMIEGLLEYSRVETQ 353

CP001860_3260: domain 1 of 1, from 481 to 547: score 54.0, E = 5.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f++++sH+LR+PL+ g+++lL + + + + e+
CP001860_3 481 RLEAFASTVSHDLRNPLALATGHLDLLTD--------RINGDGET-- 517

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +e i+ ++ r+++Li+++L+l+r +
CP001860_3 518 ----------DRHVEEIEWALARMDALIENVLTLARSGRR 547

CP001860_2879: domain 1 of 1, from 417 to 485: score 53.5, E = 7.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL ++ y++lL++++ +e +e+
CP001860_2 417 RLEQFAYAASHDLQEPLRMVSSYLQLLERRYA------DEFDEDG-- 455

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+ + + aer++++i+ lL +sr e+
CP001860_2 456 ----------EEFLDYAVDGAERMREMIDGLLAYSRVETR 485

CP001860_1709: domain 1 of 1, from 171 to 239: score 53.4, E = 7.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ ++sH+L PL ++ y++l+++++ +el+e+
CP001860_1 171 RLEEFAYAASHDLQEPLRMVSSYLQLIERRYA------DELDEDG-- 209

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++e + + a+r++++i+ lL++sr e++
CP001860_1 210 ----------REFIEFAVDGADRMRAMIDGLLEYSRVETQ 239

CP001860_0209: domain 1 of 1, from 323 to 384: score 52.6, E = 1.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ +sH+LR+PL++ g++el++e e+++e
CP001860_0 323 RLDAFAGVVSHDLRNPLNVATGNLELARE----------ERDDES-- 357

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++ +++ r+++Li dlL+l+r +
CP001860_0 358 -------------LRRTADALARMDALIGDLLTLARQGKL 384

CP001860_2259: domain 1 of 1, from 600 to 668: score 52.4, E = 1.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL ++ y++lL+ ++ ++el+++
CP001860_2 600 RLEQFAYAASHDLQEPLRMVSSYLQLLESRY------SDELDDDG-- 638

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++e + + aer++++i+ lL +sr +++
CP001860_2 639 ----------EEFIEFAVDGAERMRKMIDGLLAYSRVDTQ 668

CP001860_1012: domain 1 of 1, from 735 to 803: score 52.0, E = 1.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ ++sH+L PL ++ y++lL+ ++ ++l+++
CP001860_1 735 ELKRFAYAASHDLQEPLRMVSSYVQLLEQRYA------DDLDADA-- 773

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+e + + a+r++++i+ lL++sr+ +
CP001860_1 774 ----------QEYIEFAVDGADRMREMIDALLQYSRLNTS 803

CP001860_2965: domain 1 of 1, from 153 to 221: score 52.0, E = 2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+ ++sH+L PL ++ y+ lL ++ ++l+e+
CP001860_2 153 RLEEFAYAASHDLQEPLRMVSSYLMLLDQRYA------DDLDEDA-- 191

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey++ + + a+r++++i+ lL++sr g
CP001860_2 192 ----------REYIDFAVDGADRMRAMIDSLLEYSRVTRG 221

CP001860_2797: domain 1 of 1, from 817 to 885: score 51.6, E = 2.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL I y++lL+ ++ +el+e+
CP001860_2 817 RLEQFAYAVSHDLQEPLRMITSYLQLLESRYA------DELDEDA-- 855

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++e + + aer++++i+ lL++sr +
CP001860_2 856 ----------AEFIEFAVDGAERMREMIEGLLEYSRVTTR 885

CP001860_0255: domain 1 of 1, from 301 to 369: score 50.9, E = 3.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L+ PL + y++l+++++ ++ +e+
CP001860_0 301 RLEQFAYAASHDLKEPLRMVESYLSLIERRY-------GDVLDEDG- 339

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ + + aer+ ++in lL +sr e+
CP001860_0 340 ----------REFIDYAVDGAERMKAMINGLLAYSRVETR 369

CP001860_3398: domain 1 of 1, from 140 to 208: score 50.3, E = 6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL ++ y++l+++++ ++l+ +
CP001860_3 140 SLEQFAYAASHDLQEPLRMVSSYLQLIETRYG------DDLDGDG-- 178

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le ++ a+r++++i+ lL++sr +++
CP001860_3 179 ----------EEFLEFAIGGADRMRSMIEALLEYSRVDSE 208

CP001860_2194: domain 1 of 1, from 583 to 651: score 49.7, E = 8.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL ++ y++l++ ++ + l+++
CP001860_2 583 RLEQFAYAASHDLQEPLRMVSSYLQLIESRYT------DVLDADG-- 621

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ + + aer++++i+ lL +sr e+g
CP001860_2 622 ----------REFIDFAVDGAERMRDMIDGLLAYSRVETG 651

CP001860_2336: domain 1 of 1, from 545 to 613: score 49.7, E = 8.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL + y++lL+ ++ ++ +e+
CP001860_2 545 RLEQFAYAASHDLQEPLRMVTSYLQLLESRYA------DAFDEDG-- 583

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+le + + a+r++++i+ lL++sr e+
CP001860_2 584 ----------REFLEFAVDGADRMRAMIDGLLEYSRVETR 613

CP001860_0900: domain 1 of 1, from 974 to 1042: score 47.7, E = 3.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL + y++l+++++ +el+++
CP001860_0 974 RLEQFAYAASHDLQEPLRMVTSYLQLIENRYA------DELDADG-- 1012

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ + + aer++++i+ lL +sr e+
CP001860_0 1013 ----------REFIDFAVDGAERMREMIEGLLAYSRVETR 1042

CP001860_0516: domain 1 of 1, from 1310 to 1378: score 47.1, E = 4.7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL + y+ lL++++ ++ +e+
CP001860_0 1310 RLERFAYAASHDLQEPLRMVTSYLTLLENRYA------DAFDEDG-- 1348

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+le + + a+r++++i+ lL++sr e+
CP001860_0 1349 ----------REFLEFAVDGADRMREMIDGLLEYSRVETR 1378

CP001860_3114: domain 1 of 1, from 174 to 242: score 46.6, E = 6.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL I y++l ++++ ++l+e+
CP001860_3 174 RLEQFAYAASHDLQEPLRMITSYLSLVERRYG------DDLDEDG-- 212

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++ + + aer++++i+ lL +sr e++
CP001860_3 213 ----------EEFIAYAVDGAERMREMIDALLAYSRVETQ 242

CP001860_3386: domain 1 of 1, from 178 to 246: score 46.6, E = 6.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL + y++lL++++ +e +++
CP001860_3 178 QLEQFAYAASHDLQEPLRMVTSYLDLLEDRYA------DEFDDDG-- 216

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l +++ a+r++ i+ lL++sr e++
CP001860_3 217 ----------EEFLAFARDGADRMDTTIDALLEYSRVETQ 246

CP001860_0963: domain 1 of 1, from 490 to 558: score 46.2, E = 8.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL ++ y+ l+ +++ +el+e+
CP001860_0 490 RLEQFAYAASHDLQEPLRMVSSYLRLIDRRYG------DELDEDG-- 528

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+ + + a+r++++i+ lL++sr e+
CP001860_0 529 ----------HEFLDFAVNGADRMREMIEGLLQYSRVETR 558

CP001860_0270: domain 1 of 1, from 405 to 473: score 46.1, E = 9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL ++ y+ l+++++ ++ +e+
CP001860_0 405 RLEQFAYAASHDLQEPLRMVSSYLRLIENRYG------DAFDEDG-- 443

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le + + a+r++++i+ lL++sr ea+
CP001860_0 444 ----------EEFLEFAVEGADRMREMIQGLLEYSRVEAE 473

CP001860_2904: domain 1 of 1, from 449 to 517: score 46.1, E = 9.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL ++ y++l ++++ +el++e
CP001860_2 449 RLEQFAYAASHDLQEPLRMVSSYLQLVERRYG------DELDAEG-- 487

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l+ + + a+r++++i+ lL +sr e++
CP001860_2 488 ----------REFLQFAVDGADRMREMIDGLLKYSRVETE 517

CP001860_1071: domain 1 of 1, from 906 to 974: score 45.6, E = 1.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL + y++lL+ ++ ++ +e+
CP001860_1 906 RLEQFAYAASHDLQEPLRMVTSYLQLLESRYG------DAFDEDG-- 944

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+ + + a+r++++in lL +sr e++
CP001860_1 945 ----------EEFLNFAVDGADRMREMINGLLAYSRVETQ 974

CP001860_2271: domain 1 of 1, from 573 to 641: score 44.7, E = 2.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L PL + y+ lL++++ ++ + +
CP001860_2 573 RLEQFAYAASHDLQEPLRMVTSYLRLLENRYG------DAIDGDG-- 611

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+ + + aer++++i+ lL +sr e+
CP001860_2 612 ----------QEFLDYAVDGAERMSEMIDGLLAYSRVETR 641

CP001860_2570: domain 1 of 1, from 1140 to 1208: score 41.8, E = 1.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ ++sH+L PL + y++lL+ ++ ++ +e+
CP001860_2 1140 RLEHFAYAASHDLQEPLRMVTSYLQLLESRYG------DAFDEDG-- 1178

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le + + a+r++++i+ lL +sr e+
CP001860_2 1179 ----------EEFLEFAVDGADRMREMIDGLLAYSRVETR 1208

CP001860_3449: domain 1 of 1, from 150 to 211: score 40.3, E = 4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef++ +sH+LR+PL++ rg ++++ + ++++
CP001860_3 150 RLEEFASVVSHDLRNPLSVARGRLDAAFQ----------TGNADH-- 184

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l ++ ++ r+++Li++ L +r +++
CP001860_3 185 -------------LTEVDAALTRMDELIEESLSVARSGTQ 211


Histogram of all scores:
score obs exp (one = represents 12 sequences)
----- --- ---
-15 1 0|=
-14 18 0|==
-13 65 2|*=====
-12 191 85|=======*========
-11 375 443|================================ *
-10 618 822|==================================================== *
-9 681 849|========================================================= *
-8 602 635|=================================================== *
-7 466 400|=================================*=====
-6 286 230|===================*====
-5 161 126|==========*===
-4 88 67|=====*==
-3 58 35|==*==
-2 41 18|=*==
-1 20 9|*=
0 11 5|*
1 8 2|*
2 4 1|*
3 2 0|=
4 1 0|=
5 0 0|
6 0 0|
7 1 0|=
8 1 0|=
> 9 40 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 323.7136
P(chi-square) = 0

Total sequences searched: 3739

Whole sequence top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 34K


Acknowledgements:

This research is funded by:

Developed by: