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Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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106 projects found  

1 accessions found for Amycolatopsis mediterranei U32  

Data for CP002000  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP002000.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP002000_4470 CDS_4968227-4972777 84.3 3.4e-23 1
CP002000_8794 CDS_9784866-9783388 83.5 5.9e-23 1
CP002000_5809 CDS_6529347-6533432 81.8 1.8e-22 1
CP002000_6645 CDS_7433303-7434835 81.1 2.7e-22 1
CP002000_6541 CDS_7321686-7320694 80.2 4.9e-22 1
CP002000_6685 CDS_7480669-7485309 80.2 4.9e-22 1
CP002000_1724 CDS_1867663-1869084 77.0 4.1e-21 1
CP002000_6267 CDS_7030001-7031398 76.0 7.6e-21 1
CP002000_2980 CDS_3221457-3220048 69.8 4.5e-19 1
CP002000_3541 CDS_3885319-3886623 69.7 4.8e-19 1
CP002000_3123 CDS_3410122-3408674 68.9 7.7e-19 2
CP002000_8192 CDS_9159007-9157958 67.6 1.9e-18 1
CP002000_2595 CDS_2809274-2810398 66.3 4.3e-18 1
CP002000_7870 CDS_8792059-8790335 64.7 1.3e-17 1
CP002000_3720 CDS_4093103-4094533 64.4 1.5e-17 1
CP002000_6808 CDS_7636794-7638212 63.8 2.2e-17 1
CP002000_0455 CDS_462355-463554 61.8 8.1e-17 1
CP002000_7912 CDS_8841446-8840127 61.5 1e-16 1
CP002000_3647 CDS_4018922-4017543 61.4 1.1e-16 1
CP002000_8505 CDS_9471148-9469775 60.7 1.7e-16 1
CP002000_5016 CDS_5635014-5633650 60.3 2.2e-16 1
CP002000_1879 CDS_2034099-2036636 59.3 4.1e-16 1
CP002000_3501 CDS_3837868-3839640 59.2 4.5e-16 1
CP002000_8203 CDS_9170125-9168716 58.9 5.3e-16 2
CP002000_8338 CDS_9305188-9306336 57.1 1.7e-15 1
CP002000_5652 CDS_6337571-6338935 57.1 1.7e-15 1
CP002000_2335 CDS_2520876-2522273 56.2 3.2e-15 1
CP002000_7465 CDS_8369713-8371521 55.4 5.4e-15 1
CP002000_7481 CDS_8388284-8386641 51.0 9.1e-14 1
CP002000_4003 CDS_4437196-4436087 50.6 1.2e-13 1
CP002000_6835 CDS_7669983-7671266 50.5 1.3e-13 1
CP002000_8518 CDS_9482884-9484221 49.0 3.5e-13 1
CP002000_5592 CDS_6278504-6277140 44.8 5.3e-12 1
CP002000_0890 CDS_955852-957045 39.3 2e-10 1
CP002000_4884 CDS_5466053-5467447 38.2 4e-10 1
CP002000_8017 CDS_8958853-8959965 36.9 9.5e-10 1
CP002000_5529 CDS_6204603-6205985 36.8 1e-09 1
CP002000_8159 CDS_9113832-9114929 31.7 2.7e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP002000_4470 1/1 960 1028 .. 1 87 [] 84.3 3.4e-23
CP002000_8794 1/1 269 336 .. 1 87 [] 83.5 5.9e-23
CP002000_5809 1/1 335 402 .. 1 87 [] 81.8 1.8e-22
CP002000_6645 1/1 269 336 .. 1 87 [] 81.1 2.7e-22
CP002000_6541 1/1 114 178 .. 1 87 [] 80.2 4.9e-22
CP002000_6685 1/1 1136 1204 .. 1 87 [] 80.2 4.9e-22
CP002000_1724 1/1 251 318 .. 1 87 [] 77.0 4.1e-21
CP002000_6267 1/1 228 294 .. 1 87 [] 76.0 7.6e-21
CP002000_2980 1/1 251 318 .. 1 87 [] 69.8 4.5e-19
CP002000_3541 1/1 218 286 .. 1 87 [] 69.7 4.8e-19
CP002000_8192 1/1 121 188 .. 1 87 [] 67.6 1.9e-18
CP002000_2595 1/1 154 221 .. 1 87 [] 66.3 4.3e-18
CP002000_3123 1/2 249 316 .. 1 87 [] 64.8 1.2e-17
CP002000_7870 1/1 306 373 .. 1 87 [] 64.7 1.3e-17
CP002000_3720 1/1 257 324 .. 1 87 [] 64.4 1.5e-17
CP002000_6808 1/1 260 324 .. 1 87 [] 63.8 2.2e-17
CP002000_0455 1/1 132 198 .. 1 87 [] 61.8 8.1e-17
CP002000_7912 1/1 219 284 .. 1 87 [] 61.5 1e-16
CP002000_3647 1/1 236 303 .. 1 87 [] 61.4 1.1e-16
CP002000_8505 1/1 238 301 .. 1 87 [] 60.7 1.7e-16
CP002000_5016 1/1 232 298 .. 1 87 [] 60.3 2.2e-16
CP002000_1879 1/1 618 686 .. 1 87 [] 59.3 4.1e-16
CP002000_3501 1/1 374 438 .. 1 87 [] 59.2 4.5e-16
CP002000_8203 1/2 245 317 .. 1 87 [] 58.4 7.7e-16
CP002000_8338 1/1 165 231 .. 1 87 [] 57.1 1.7e-15
CP002000_5652 1/1 235 302 .. 1 87 [] 57.1 1.7e-15
CP002000_2335 1/1 247 312 .. 1 87 [] 56.2 3.2e-15
CP002000_7465 1/1 361 425 .. 1 87 [] 55.4 5.4e-15
CP002000_7481 1/1 303 371 .. 1 87 [] 51.0 9.1e-14
CP002000_4003 1/1 153 219 .. 1 87 [] 50.6 1.2e-13
CP002000_6835 1/1 226 290 .. 1 87 [] 50.5 1.3e-13
CP002000_8518 1/1 230 295 .. 1 87 [] 49.0 3.5e-13
CP002000_5592 1/1 238 309 .. 1 87 [] 44.8 5.3e-12
CP002000_0890 1/1 177 241 .. 1 87 [] 39.3 2e-10
CP002000_4884 1/1 237 300 .. 1 87 [] 38.2 4e-10
CP002000_8017 1/1 151 215 .. 1 87 [] 36.9 9.5e-10
CP002000_5529 1/1 237 309 .. 1 87 [] 36.8 1e-09
CP002000_8159 1/1 134 198 .. 1 87 [] 31.7 2.7e-08

Alignments of top-scoring domains:
CP002000_4470: domain 1 of 1, from 960 to 1028: score 84.3, E = 3.4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ +a+lL +l+++q
CP002000_4 960 YKSEFLANMSHELRTPLNSLLILAQLLAQ------NPTRNLTAKQ-- 998

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey +i++++ ll+Lind+Ldls+ eag
CP002000_4 999 ----------VEYAGIIHSAGSDLLQLINDILDLSKVEAG 1028

CP002000_8794: domain 1 of 1, from 269 to 336: score 83.5, E = 5.9e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a++sHELRTPL+aIrgyael ++++ + +++
CP002000_8 269 RVRQFVADASHELRTPLAAIRGYAELTRRGG-------EQVPPDV-- 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +++++e++r+ L++dlL l+r+++g
CP002000_8 307 ----------AFAMSRVESESRRMTTLVEDLLLLARLDSG 336

CP002000_5809: domain 1 of 1, from 335 to 402: score 81.8, E = 1.8e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+an+sHE+RTPLt I+g a L+e + +++ +r
CP002000_5 335 AKTTFFANISHEFRTPLTLILGPAAELRE---------ALAGAGER- 371

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+re +++i+r a rl rL+n+lLd+srieag
CP002000_5 372 ---------VREEVDVIQRNALRLGRLVNNLLDFSRIEAG 402

CP002000_6645: domain 1 of 1, from 269 to 336: score 81.1, E = 2.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a++sHELRTPL+aIrgyael+ +++ + +++
CP002000_6 269 RVRQFVADASHELRTPLAAIRGYAELAARGS-------ALVPPDV-- 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +i++ea r+ +L++dlL l+r++ g
CP002000_6 307 ----------AHSMGRIQSEAVRMTALVEDLLLLARLDGG 336

CP002000_6541: domain 1 of 1, from 114 to 178: score 80.2, E = 4.9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++an+sHELRTP+ta+ g +e L +++ ++ ++ +
CP002000_6 114 QRRELIANVSHELRTPITALNGVLENLVDGV-------EDPDPGT-- 151

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+t+l+++erl +L+++lLdlsr++ag
CP002000_6 152 -------------LKTALQQTERLAALVDELLDLSRLDAG 178

CP002000_6685: domain 1 of 1, from 1136 to 1204: score 80.2, E = 4.9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef+an+sHELRTPL++ + +a+lL e +++l+e+q+
CP002000_6 1136 YKTEFMANMSHELRTPLNSALILAKLLSE------NPEGNLTEKQI- 1175

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +ti+ ++ l++Lind+Ldl++ eag
CP002000_6 1176 -----------QFAKTIYAAGSDLQQLINDILDLAKVEAG 1204

CP002000_1724: domain 1 of 1, from 251 to 318: score 77.0, E = 4.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTPLt+Irgya+l + ++++e+
CP002000_1 251 RLRRFVADASHELRTPLTSIRGYADLFRY---------AAANEPA-- 286

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e + l +i++e+ r+ L++dlL l+r++a
CP002000_1 287 --------EREAHLAKIREETARMTVLVDDLLLLARLDAR 318

CP002000_6267: domain 1 of 1, from 228 to 294: score 76.0, E = 7.6e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++efl ++sHELRTPLta+ g+ae++ + + ++ +++
CP002000_6 228 RQREFLLSVSHELRTPLTAVTGFAEAIAD---------GVATGPDA- 264

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +ti+rea rl+rL+ dlL+l+r++a
CP002000_6 265 ----------VRAGQTIQREAVRLERLVTDLLELARLGAD 294

CP002000_2980: domain 1 of 1, from 251 to 318: score 69.8, E = 4.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++f+a++sHELRTPL+a+ + +++L e++ + l++++
CP002000_2 251 DARRFVADVSHELRTPLAAMNAVTDVLDEDA-------EQLPPDT-- 288

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + + e++rl rL++dl ++sr +ag
CP002000_2 289 ----------AVAARLVSAETRRLTRLVQDLIEISRFDAG 318

CP002000_3541: domain 1 of 1, from 218 to 286: score 69.7, E = 4.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HELRTPL++++++ae+Ll + ++ + e+r
CP002000_3 218 RTRRFVADAAHELRTPLAGVQAAAEALLQ-------QPADTPHEHR- 256

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + re++r +L+ dlLdl+r+++g
CP002000_3 257 ----------ERLQLLVVRESQRAGKLVADLLDLARLDSG 286

CP002000_8192: domain 1 of 1, from 121 to 188: score 67.6, E = 1.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++a +sH+LR PL++I+++ae+L + + se
CP002000_8 121 SRRELVAWISHDLRSPLAGIQAMAEALAD---------GVVSERN-- 156

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++y ++i e++rl++++ dl +lsri ag
CP002000_8 157 --------EVADYAQRISGETRRLSAMVGDLFELSRITAG 188

CP002000_2595: domain 1 of 1, from 154 to 221: score 66.3, E = 4.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+an+sHELRTPL++Ir+ +++ l+ d++++e ++
CP002000_2 154 AQRHFVANASHELRTPLSVIRTELDVTLA--------DDDADEAEL- 191

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ ++++++er +L+n lL l+r +
CP002000_2 192 ----------RRMGGVVRDATERAGQLVNSLLLLARTDGA 221

CP002000_3123: domain 1 of 2, from 249 to 316: score 64.8, E = 1.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f++++sHELRTPL +I+g ael ++++ + +++
CP002000_3 249 RMRTFVSDVSHELRTPLFGIKGSAELYRMGA-------LAGPSDV-- 286

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e ++i+rea rl +L +dlL l+++++
CP002000_3 287 ----------DETMRRIDREATRLTALTEDLLLLAQLDEA 316

CP002000_7870: domain 1 of 1, from 306 to 373: score 64.7, E = 1.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f++++sHELRTPLt++r++a++L + +++ ++
CP002000_7 306 LQRRFTSDVSHELRTPLTTVRMAADVLHA-------SREQFPAGL-- 343

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +e + +e++r ++L+ dlL++sr++ag
CP002000_7 344 ----------ARSTELLVDELDRFEALLGDLLEISRLDAG 373

CP002000_3720: domain 1 of 1, from 257 to 324: score 64.4, E = 1.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++f+a++sHELRTPL+++ + +e+L + t+ + e +
CP002000_3 257 DARRFAADVSHELRTPLSTLTAVVEVLAT---------TADGMEADA 294

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re + ++ e++rl rL++dl++ +r++ag
CP002000_3 295 ----------RESAQLAIVETHRLVRLVEDLMEVARLDAG 324

CP002000_6808: domain 1 of 1, from 260 to 324: score 63.8, E = 2.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a+++H+LRTPL+++++++++L + ++
CP002000_6 260 QQRRFVADVAHDLRTPLASMIATVDTLDH----------AEPATR-- 294

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ +a+rl +L++dlL+++r +ag
CP002000_6 295 ----------TRAAAILGTQARRLAKLVEDLLEIARFDAG 324

CP002000_0455: domain 1 of 1, from 132 to 198: score 61.8, E = 8.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHEL+TP+ aI +++e+ l+ ++ + ++
CP002000_0 132 VRRDFVANVSHELKTPVGAIALLTEAVLD---------AAEDVAEV- 168

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ +ilre+ rl +L+ +l lsr++
CP002000_0 169 ----------RRFGGKILRESTRLGQLVTELIALSRLQGA 198

CP002000_7912: domain 1 of 1, from 219 to 284: score 61.5, E = 1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +++HELR P+++Ir ae++ + + +e
CP002000_7 219 RLRRFTGDAAHELRSPVASIRVQAEVAVT---------NPDPELA-- 254

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+ il eaerl++L++ lL l+r +ag
CP002000_7 255 ----------QETLSDILTEAERLSSLLDGLLSLARSDAG 284

CP002000_3647: domain 1 of 1, from 236 to 303: score 61.4, E = 1.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++ +++HELRTPLt++r++a++L++ +el++e r
CP002000_3 236 DQERLVQDAAHELRTPLTSLRTNASVLRR--------FAELTPESR- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ ++ e++ l +L+++l +l+ + +
CP002000_3 274 ----------ARLLDDVDGETRELTHLVDELVELATRRYE 303

CP002000_8505: domain 1 of 1, from 238 to 301: score 60.7, E = 1.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+a++sHELR PL++I++++++ + +e +
CP002000_8 238 AQRRFVADASHELRSPLSTISTALDVSGR-----------HPEST-- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +i re+ rl++L++dlL l+r +
CP002000_8 272 ----------GDLVPVIARETARLRELVDDLLMLARTDDA 301

CP002000_5016: domain 1 of 1, from 232 to 298: score 60.3, E = 2.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHE RTPLt +r+++el+ + + +s +++
CP002000_5 232 RQRQFVADASHEVRTPLTNLRTTLELAGA---------PGRSLPEL- 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++ +++e+ rl rL++dlL l+ +
CP002000_5 269 ----------REAVRHAEQETIRLGRLVDDLLVLAADDDH 298

CP002000_1879: domain 1 of 1, from 618 to 686: score 59.3, E = 4.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +l+++ H+LRTPLt+I++ + L++ d elsee++
CP002000_1 618 LRTTLLSAVGHDLRTPLTSIKASIGSLRA-------ADLELSEEDT- 656

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ e i+ +a+rl Li++lLd sr+ +g
CP002000_1 657 ----------AELMEAIELSADRLAGLIDNLLDSSRLATG 686

CP002000_3501: domain 1 of 1, from 374 to 438: score 59.2, E = 4.5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++++++sHELRTPL +Irg + + ++++ +el++e
CP002000_3 374 QRRDLISDVSHELRTPLGTIRGWLVATQDGV-------AELDDEL-- 411

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++l+e+ l++L++dl+dl+ ++ag
CP002000_3 412 -------------VSSLLQETSVLQHLVDDLRDLALADAG 438

CP002000_8203: domain 1 of 2, from 245 to 317: score 58.4, E = 7.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
++++++a++ HELRTPLt++r+++elLl+ + +g ++l +e+r
CP002000_8 245 RQRQLVADAGHELRTPLTSLRTNLELLLA----AsKPGAPPLRDEDR 287

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i +++ l +Li dl +l+r +++
CP002000_8 288 -----------VDIIADISGQLDELTQLIGDLVELARQDEP 317

CP002000_8338: domain 1 of 1, from 165 to 231: score 57.1, E = 1.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPL++ r+++e++ + d+e ++e
CP002000_8 165 SQKRFVANASHELRTPLAVQRTLIEVAMA--------DPEVPPEL-- 201

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ +l+ er +r+i+ lL l+r + g
CP002000_8 202 ----------RKLGTHLLHTNERSERMIEGLLVLARSDRG 231

CP002000_5652: domain 1 of 1, from 235 to 302: score 57.1, E = 1.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f++++sHELR PLt++ +e+L++++ ++++e
CP002000_5 235 RDARFASDVSHELRSPLTTMVNVSEVLERRQ-------DAMPETA-- 272

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ +++e++r +r++ dlL++sr+++
CP002000_5 273 ----------QRALRLLRSELRRFQRMVVDLLEISRADQD 302

CP002000_2335: domain 1 of 1, from 247 to 312: score 56.2, E = 3.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+a++sH+LR+PLta++ + L+ + +e+
CP002000_2 247 AQRAFVADASHQLRNPLTALKIRLGNLEG---------HVVDEPA-- 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ le ++ +a rl ++++ lL+++r+ea
CP002000_2 283 ----------AADLEAARVDASRLHQILDGLLTMARAEAS 312

CP002000_7465: domain 1 of 1, from 361 to 425: score 55.4, E = 5.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++++++HELR+PL++Irg +e++++ + +
CP002000_7 361 QRKAMVSDIAHELRNPLNVIRGRLEAAED----------GHLPFD-- 395

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + ++l+e+ l+++++dl dl+ ++ag
CP002000_7 396 ----------RALSASLLEETVLLQHIVDDLQDLAAADAG 425

CP002000_7481: domain 1 of 1, from 303 to 371: score 51.0, E = 9.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+L PL + +++lL++++ + l +e
CP002000_7 303 DLEQFAYVASHDLQEPLRKVASFCQLLQRRY-------QGLLDERG- 341

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+e + + a+r++ LindlL +sr +
CP002000_7 342 ----------EQYIEYAVDGAKRMQVLINDLLAFSRVGRK 371

CP002000_4003: domain 1 of 1, from 153 to 219: score 50.6, E = 1.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+an++HELRTPLt++r+++++ l+ + + ++e
CP002000_4 153 SQRLFTANAAHELRTPLTTMRTAIDVTLD--------SRPGTAEL-- 189

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ ++e+ +r ++ lL l+r +ag
CP002000_4 190 ----------LAMAADVRTAVEQSRRTLDGLLALARSQAG 219

CP002000_6835: domain 1 of 1, from 226 to 290: score 50.5, E = 1.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f a +sH+LRTPLt++r+ +e++le + +++
CP002000_6 226 RERAFSAEASHQLRTPLTGLRLQLEAALE----------TPGADP-- 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + +a+rl+r i+dlL l r + g
CP002000_6 261 ----------YAAIRAGIASADRLERTIEDLLALGRERRG 290

CP002000_8518: domain 1 of 1, from 230 to 295: score 49.0, E = 3.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f+a++sHELRTPL+++r+ +e+ l+ ++rl
CP002000_8 230 RQSQFTADASHELRTPLASMRTQLEVQLA-------------HPDRL 263

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ r +e + ++ r++ L dlL ls+++
CP002000_8 264 DW--------RHSFENAVLDVSRMETLTGDLLLLSKLDID 295

CP002000_5592: domain 1 of 1, from 238 to 309: score 44.8, E = 5.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ e++ +++HELRTPLt++r++++lL + +e++ ++
CP002000_5 238 RQHELVTDAAHELRTPLTSLRTNIDLLAR---------SEQTGRPIP 275

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e R ++++++++ +a +L+ +l l+r e +
CP002000_5 276 AEQR------AKIIDRLQAQAGEFTDLVTELVVLARDERE 309

CP002000_0890: domain 1 of 1, from 177 to 241: score 39.3, E = 2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+a++sHELR PLt + + a+lL +++ + +++ +
CP002000_0 177 RQRTFVADASHELRAPLTRLHTRAQLLARRS-------SGRDAAD-- 214

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ + r ++ l + ++dlL +++ +
CP002000_0 215 -------------LDQLVRGTRELGEVVEDLLLSAQACGE 241

CP002000_4884: domain 1 of 1, from 237 to 300: score 38.2, E = 4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +++a++sH+LR+P++a+r+ ++ L +++++
CP002000_4 237 QQHRLVADASHQLRNPMAALRLRVDSLAG---------RIDGDDTT- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e+erl++L++ lL l+ +e+
CP002000_4 274 -------------YRATVAEVERLEKLLDGLLALALAEST 300

CP002000_8017: domain 1 of 1, from 151 to 215: score 36.9, E = 9.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHELRTPL++ ++ ++++ + + e
CP002000_8 151 EQQRFAANASHELRTPLAVSQAILDVAGR----------DPAYER-- 185

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++e+++ r +L + lL lsr +
CP002000_8 186 ----------GELIERLRTVNTRAIDLTEALLLLSRSDRR 215

CP002000_5529: domain 1 of 1, from 237 to 309: score 36.8, E = 1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
++++++ ++ HELRTPLt++r ++elL ++ ls+e+r
CP002000_5 237 EQRRLVEDAGHELRTPLTSLRNNIELLIH----AeATPQRQLSAEDR 279

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l ++ +a l +Li +l dls e +
CP002000_5 280 -----------TRLLADLDTQAVELTALIGELVDLSTGERP 309

CP002000_8159: domain 1 of 1, from 134 to 198: score 31.7, E = 2.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHELRTPL+ + +++++++ +e ++
CP002000_8 134 EQRRFAANASHELRTPLAITQSLLDVARN-----------DPERTT- 168

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ e+++ r +L + lL lsr+e+
CP002000_8 169 ----------GELDERLRVVNARAIELTEALLLLSRAEQR 198


Histogram of all scores:
score obs exp (one = represents 32 sequences)
----- --- ---
-14 10 0|=
-13 70 6|*==
-12 335 210|======*====
-11 883 1093|============================ *
-10 1556 2029|================================================= *
-9 1848 2095|==========================================================*
-8 1641 1568|================================================*===
-7 1222 988|==============================*========
-6 740 569|=================*======
-5 400 312|=========*===
-4 235 167|=====*==
-3 125 88|==*=
-2 51 46|=*
-1 37 24|*=
0 13 12|*
1 8 6|*
2 5 3|*
3 3 1|*
4 2 0|=
> 5 44 -|==


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 1012.7537
P(chi-square) = 0

Total sequences searched: 9228

Whole sequence top hits:
tophits_s report:
Total hits: 38
Satisfying E cutoff: 38
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 38
Satisfying E cutoff: 38
Total memory: 36K


Acknowledgements:

This research is funded by:

Developed by: