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Thermotogae
Classification of phyla is from NCBI page
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41 projects found  

1 accessions found for Prevotella ruminicola 23  

Data for CP002006  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP002006.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP002006_0631 CDS_800179-798950 85.4 5.1e-24 1
CP002006_0066 CDS_89153-86376 80.7 1.1e-22 1
CP002006_0067 CDS_91132-89150 76.8 1.4e-21 1
CP002006_1112 CDS_1424247-1422424 64.7 3.7e-18 1
CP002006_0271 CDS_353580-351454 62.8 1.2e-17 1
CP002006_2587 CDS_3398991-3397339 62.6 1.4e-17 1
CP002006_2537 CDS_3290194-3294234 62.0 2.1e-17 1
CP002006_2432 CDS_3141209-3139368 61.9 2.3e-17 1
CP002006_0260 CDS_334980-338924 60.7 4.9e-17 1
CP002006_0795 CDS_998558-997659 59.8 8.9e-17 1
CP002006_2193 CDS_2835546-2833642 59.8 9.2e-17 1
CP002006_0065 CDS_86366-83622 59.7 9.8e-17 1
CP002006_1508 CDS_1947738-1945903 59.1 1.4e-16 1
CP002006_0663 CDS_840852-842954 57.1 5.3e-16 1
CP002006_1684 CDS_2178141-2176987 56.5 7.6e-16 1
CP002006_1940 CDS_2507379-2511407 55.3 1.7e-15 1
CP002006_2247 CDS_2896509-2899532 55.2 1.8e-15 1
CP002006_2568 CDS_3359432-3355428 55.0 2.1e-15 1
CP002006_1464 CDS_1879420-1883586 54.0 3.8e-15 1
CP002006_0574 CDS_725220-726782 53.9 4.2e-15 1
CP002006_2406 CDS_3103021-3104703 53.4 5.7e-15 1
CP002006_1673 CDS_2159922-2161706 52.5 1e-14 1
CP002006_0068 CDS_93170-91134 50.5 4e-14 2
CP002006_2166 CDS_2800900-2802195 50.3 4.3e-14 1
CP002006_1023 CDS_1300781-1298805 50.2 4.8e-14 1
CP002006_2554 CDS_3332364-3328360 48.8 1.2e-13 1
CP002006_1198 CDS_1541124-1539172 46.4 5.8e-13 1
CP002006_2287 CDS_2958286-2954432 44.3 2.2e-12 1
CP002006_1493 CDS_1930269-1929481 41.5 1.4e-11 1
CP002006_1253 CDS_1599282-1600946 39.8 4.3e-11 1
CP002006_0828 CDS_1040362-1039220 32.1 6.3e-09 1
CP002006_1933 CDS_2494330-2496243 30.1 2.3e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP002006_0631 1/1 42 107 .. 1 87 [] 85.4 5.1e-24
CP002006_0066 1/1 703 768 .. 1 87 [] 80.7 1.1e-22
CP002006_0067 1/1 433 498 .. 1 87 [] 76.8 1.4e-21
CP002006_1112 1/1 377 446 .. 1 87 [] 64.7 3.7e-18
CP002006_0271 1/1 477 545 .. 1 87 [] 62.8 1.2e-17
CP002006_2587 1/1 327 395 .. 1 87 [] 62.6 1.4e-17
CP002006_2537 1/1 825 891 .. 1 87 [] 62.0 2.1e-17
CP002006_2432 1/1 385 453 .. 1 87 [] 61.9 2.3e-17
CP002006_0260 1/1 805 867 .. 1 87 [] 60.7 4.9e-17
CP002006_0795 1/1 76 144 .. 1 87 [] 59.8 8.9e-17
CP002006_2193 1/1 411 480 .. 1 87 [] 59.8 9.2e-17
CP002006_0065 1/1 697 762 .. 1 87 [] 59.7 9.8e-17
CP002006_1508 1/1 385 453 .. 1 87 [] 59.1 1.4e-16
CP002006_0663 1/1 466 534 .. 1 87 [] 57.1 5.3e-16
CP002006_1684 1/1 166 231 .. 1 87 [] 56.5 7.6e-16
CP002006_1940 1/1 807 872 .. 1 87 [] 55.3 1.7e-15
CP002006_2247 1/1 775 843 .. 1 87 [] 55.2 1.8e-15
CP002006_2568 1/1 810 875 .. 1 87 [] 55.0 2.1e-15
CP002006_1464 1/1 871 937 .. 1 87 [] 54.0 3.8e-15
CP002006_0574 1/1 288 356 .. 1 87 [] 53.9 4.2e-15
CP002006_2406 1/1 335 403 .. 1 87 [] 53.4 5.7e-15
CP002006_1673 1/1 373 441 .. 1 87 [] 52.5 1e-14
CP002006_2166 1/1 205 273 .. 1 87 [] 50.3 4.3e-14
CP002006_1023 1/1 437 505 .. 1 87 [] 50.2 4.8e-14
CP002006_2554 1/1 806 872 .. 1 87 [] 48.8 1.2e-13
CP002006_0068 2/2 451 516 .. 1 87 [] 48.7 1.2e-13
CP002006_1198 1/1 419 487 .. 1 87 [] 46.4 5.8e-13
CP002006_2287 1/1 774 839 .. 1 87 [] 44.3 2.2e-12
CP002006_1493 1/1 30 97 .. 1 87 [] 41.5 1.4e-11
CP002006_1253 1/1 26 89 .. 1 87 [] 39.8 4.3e-11
CP002006_0828 1/1 155 224 .. 1 87 [] 32.1 6.3e-09
CP002006_1933 1/1 410 436 .. 1 27 [. 30.1 2.3e-08

Alignments of top-scoring domains:
CP002006_0631: domain 1 of 1, from 42 to 107: score 85.4, E = 5.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHE+RTPL+aI g++ +L e t+ ++
CP002006_0 42 MKSLFLANMSHEIRTPLNAIEGFSRVLVE---------TDSQDDR-- 77

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e+i++ +rl +L+n++Ldlsr eag
CP002006_0 78 ----------MKFFEIIESNNNRLMSLVNEILDLSRVEAG 107

CP002006_0066: domain 1 of 1, from 703 to 768: score 80.7, E = 1.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fl n+sHE+RTPL+++ g++el ++ ++ +e++
CP002006_0 703 VKNAFLHNMSHEIRTPLNTVVGFSELFEM---------DHSPEDE-- 738

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ i++++ +ll+Lind+L lsr++ag
CP002006_0 739 ----------AVFINEIKESSASLLKLINDILFLSRLDAG 768

CP002006_0067: domain 1 of 1, from 433 to 498: score 76.8, E = 1.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks fla++sHE+RTPL+aI g++++L + ++e+r
CP002006_0 433 RKSTFLASMSHEIRTPLNAIVGFSDVLAT----------MSTPEER- 468

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++++i + + llrL+nd+L ls +e+g
CP002006_0 469 ----------EGIIQVISNNCDMLLRLVNDILALSSLESG 498

CP002006_1112: domain 1 of 1, from 377 to 446: score 64.7, E = 3.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fl n+sH LRTPL+aI+g+++lL + d++l++e+r
CP002006_1 377 LKDIFLGNMSHSLRTPLNAIIGFSDLLMT------MDDSALPPEER- 416

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ i + + ll+Lin+lL ls e
CP002006_1 417 ----------ANLLQLINKNGLELLHLINELLSLSEVEGD 446

CP002006_0271: domain 1 of 1, from 477 to 545: score 62.8, E = 1.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+f+ +sHE RTPL++++g++++L + d e s++++
CP002006_0 477 MKSKFIHQISHEVRTPLNVLSGFTQVLAA-------PDIEISADEL- 515

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++i + +er+ rL++ +Ldls a
CP002006_0 516 ----------QSISKKIVENSERITRLVDKMLDLSMVNAH 545

CP002006_2587: domain 1 of 1, from 327 to 395: score 62.6, E = 1.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ f+ +sHE+RTPL+ ++g++++L + d el+e+++
CP002006_2 327 MKTHFIQQISHEIRTPLNILSGFTQILTT-------PDLELGEDEK- 365

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + i +er+ L+n +L+ls + +
CP002006_2 366 ----------KQIANDIVTNTERITGLVNKMLELSDANSR 395

CP002006_2537: domain 1 of 1, from 825 to 891: score 62.0, E = 2.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f+an++HE+RTPLt I g + L + ++ ++e+
CP002006_2 825 MNMSFFANIAHEFRTPLTMIAGPVGQLAK--------SDRVGDEE-- 861

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l++++r+++r+ +L+n+l+d+ ++e+
CP002006_2 862 ----------RSLLSIAQRSIQRMFKLVNQLMDFNKLEND 891

CP002006_2432: domain 1 of 1, from 385 to 453: score 61.9, E = 2.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ksef++n+sHE+RTPL+ ++g++++L + +l+ ++
CP002006_2 385 MKSEFIRNISHEIRTPLNIVSGFTQVLTS-------PEMDLPKTEK- 423

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e++ + ++r+ +Li+++L +s i +
CP002006_2 424 ----------KDIQERVTENTDRITKLIDRMLMISNIHSD 453

CP002006_0260: domain 1 of 1, from 805 to 867: score 60.7, E = 4.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ f+ +++HE+RTP++ I+g +e +l+ + ++++
CP002006_0 805 ARLNFFTMIAHEIRTPVSLIIGPLEKMLK---------HGTPSDD-- 840

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i+r a+rll+L+n+lLd+ + e++
CP002006_0 841 -------------LKVIDRNAHRLLELVNQLLDFRKVEQQ 867

CP002006_0795: domain 1 of 1, from 76 to 144: score 59.8, E = 8.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fl ++ HE+RTPL+aI+g++++L + + el+e++r
CP002006_0 76 AKTAFLQSMTHEIRTPLNAISGFTQILTMPG-------MELPEQDR- 114

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y +i+ ++ l ++++dl +s +e
CP002006_0 115 ----------QDYSTRIQVNTRLLTNILDDLILISHMEGD 144

CP002006_2193: domain 1 of 1, from 411 to 480: score 59.8, E = 9.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ f+ n+ H++RTPL+ I+g+a++L + ag+++ls++++
CP002006_2 411 QKTTFIQNVTHQIRTPLNIIMGFAQVLSD------AGSGNLSDDDL- 450

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++t+ + a +l+r+++ l d s + +
CP002006_2 451 ----------KNVTDTMNHNATQLNRMVQMLFDSSDSGLN 480

CP002006_0065: domain 1 of 1, from 697 to 762: score 59.7, E = 9.8e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k flan+ HE+RTPL+aI g+++lL e +e
CP002006_0 697 MKAAFLANMTHEIRTPLNAIVGFSDLLPV---------VEEHSER-- 732

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++++i++ + l rLind+L+ s ++
CP002006_0 733 ----------MEFIRIIRNNCDMLMRLINDILEASNVGQA 762

CP002006_1508: domain 1 of 1, from 385 to 453: score 59.1, E = 1.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f++++sHE+RTPL+ I g++++L e +e +e+r
CP002006_1 385 MKTDFIRSVSHEIRTPLNIINGFTQVLME-------PNAEFEPEER- 423

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +ti + ++++ +L+n +L l+ +
CP002006_1 424 ----------QSLADTIGKNTRQITSLVNKMLALANEHTK 453

CP002006_0663: domain 1 of 1, from 466 to 534: score 57.1, E = 5.3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f+ +sHE+RTPL++++g+a++L + +++ +e ++
CP002006_0 466 MKTRFIQQISHEFRTPLNVLSGFAQVLTD--------SDAYLDESLR 504

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + il+ ++r+ +L+n +L+ls +
CP002006_0 505 ----------QDANRQILENTNRITNLVNKMLELSDVSSR 534

CP002006_1684: domain 1 of 1, from 166 to 231: score 56.5, E = 7.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ flan+ HE+RTPL+aI g+a+lL see+r
CP002006_1 166 LKTAFLANMGHEIRTPLNAIVGFADLLPV----------VESEEDR- 201

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ i++ ll++i+ l +s+ ea+
CP002006_1 202 ----------NQLISEIQKNNYKLLNIIDGLVSMSKVEAE 231

CP002006_1940: domain 1 of 1, from 807 to 872: score 55.3, E = 1.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks f+ ++sHEL+TPL+ I++ ++ + + +e + e
CP002006_1 807 MKSNFFTMVSHELKTPLSLIIAPLKSISA---------SEVDKEV-- 842

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ ++r +++Lin+l ++ +ie+
CP002006_1 843 ----------GESLNLAIRNCSKMEHLINELVTFNKIESD 872

CP002006_2247: domain 1 of 1, from 775 to 843: score 55.2, E = 1.8e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ f++ +sHE+RTPL+ ++g+++++ + d +l+e +r
CP002006_2 775 MKTNFIRQISHEIRTPLNILSGFTQIITM-------PDMKLDEATR- 813

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++i + ++r+ L+n +L+ls + ++
CP002006_2 814 ----------TDINHKIVENTDRITGLVNKMLELSDASSQ 843

CP002006_2568: domain 1 of 1, from 810 to 875: score 55.0, E = 2.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +f+ n+sHE+RTP+t I++ + L + + +++ r
CP002006_2 810 AKLRFFMNMSHEIRTPMTLILTPLLSLIK----------NDNDPSR- 845

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ eti+r aer+l+Lin+++dl +i+ g
CP002006_2 846 ----------KAVYETIRRNAERILSLINQMMDLRKIDKG 875

CP002006_1464: domain 1 of 1, from 871 to 937: score 54.0, E = 3.8e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f+ +++HE+RTPL+ I+g+a+ L ++ +
CP002006_1 871 FRLNFFTHIAHEFRTPLAIISGAADKLTQ--------KGNDTQVS-- 907

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++t++r + rl +L+n+l+++ ri +g
CP002006_1 908 ----------RSAVQTVRRGTLRLTKLVNQLMEFRRINTG 937

CP002006_0574: domain 1 of 1, from 288 to 356: score 53.9, E = 4.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+ HEL+TP+++I+++a+++ + + + +eq++
CP002006_0 288 IKNDFINNMTHELKTPIASISLAAQMMND--------PSVAKSEQMA 326

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +i +e++rl+ L++ +L++s +
CP002006_0 327 ----------KHLGGVISDESKRLRFLVEKVLQMSMFDKK 356

CP002006_2406: domain 1 of 1, from 335 to 403: score 53.4, E = 5.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks f+ +sHE+RTPL+ I g++++L + d+el+ ++
CP002006_2 335 MKSNFIKQISHEIRTPLNIICGFTQVLTT-------TDAELDKAEK- 373

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ i++ aer+ L+n +L l+ i +
CP002006_2 374 ----------RDMSVQIIDNAERITGLVNKMLALAEINSS 403

CP002006_1673: domain 1 of 1, from 373 to 441: score 52.5, E = 1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ f+ n+sHE RTPL+ I g+a+++ + d ++++e+r
CP002006_1 373 MKTAFIQNVSHEVRTPLNIITGFAQVIAD-------PDLAADPEER- 411

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +++++++ Li+++ ls ie+
CP002006_1 412 ----------KHISTMMQKSTRQVTILIDEIIGLSLIEST 441

CP002006_2166: domain 1 of 1, from 205 to 273: score 50.3, E = 4.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f ++ H+++ PL++I++ a+ L ++ +++ ++
CP002006_2 205 LRNDFSYAMVHDMKSPLSSIIMGAHFLHS---------GKVDDKPQI 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++y +i++eae+ll+L+n lL++s++e+
CP002006_2 243 K---------EKYYTIIEEEAEHLLALVNKLLTISKLENK 273

CP002006_1023: domain 1 of 1, from 437 to 505: score 50.2, E = 4.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ f+ ++sHE+RTPL+ I g+a++ + d +ls+e+r
CP002006_1 437 MKTAFVQHISHEIRTPLNIITGFAQVVSN-------PDYDLSDEDR- 475

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i + + + + +n+lL+ls e++
CP002006_1 476 ----------NRIMADISHNTTEITNFVNELLELSESESQ 505

CP002006_2554: domain 1 of 1, from 806 to 872: score 48.8, E = 1.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +fl n+ HEL+TPLt I g +e + + +t+++e
CP002006_2 806 EKLKFLTNVVHELNTPLTLIYGPCERIMA--------YTKADEFV-- 842

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y+ ++ + + rl++Li+++ dl r +g
CP002006_2 843 ----------RKYVGKVMQNLGRLNSLIQEVIDLRRVTTG 872

CP002006_0068: domain 2 of 2, from 451 to 516: score 48.7, E = 1.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fl n+s ELR PL+a++g+a+l ++ ++ l +e
CP002006_0 451 LKNAFLLNMSYELRVPLHAVIGFADLFKT--------EHSLEDEP-- 487

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i++ ++ ll+Lind+L +sr++a
CP002006_0 488 -----------IFANEIKKNTDVLLNLINDILFISRLDAH 516

CP002006_1198: domain 1 of 1, from 419 to 487: score 46.4, E = 5.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efl ++ H++RTPL+ I g++++L++++ + + e++
CP002006_1 419 KKNEFLQDITHQIRTPLNIINGFTQVLRDDY-------ESIPQEDL- 457

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++et++ a ++r++ l s ++
CP002006_1 458 ----------GNITETMQTNAILISRMVGMLIVASNAGKD 487

CP002006_2287: domain 1 of 1, from 774 to 839: score 44.3, E = 2.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +fl n+ H++R PLt I+ ++ Ll+ + ++e
CP002006_2 774 DKMKFLINATHDIRSPLTLIMSPLHKLLK---------RDFDPEV-- 809

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ti++ a+r ++L+n++Ld+ +++ +
CP002006_2 810 ----------TNELKTIEHNAQRVQNLVNQILDIRKMDRQ 839

CP002006_1493: domain 1 of 1, from 30 to 97: score 41.5, E = 1.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ f+an+sH LRTPL+aI++ ++ Ll++ +e +++++
CP002006_1 30 IKTVFMANVSHALRTPLNAIITDSQKLLDN--------EESDPKKL- 67

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ti + +++ll i++lL+ls +++
CP002006_1 68 ----------KAMMTTINQNGKQLLYFISQLLELSSFDSN 97

CP002006_1253: domain 1 of 1, from 26 to 89: score 39.8, E = 4.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s + n+ HEL TPL++I++ ++ L++ +e+q
CP002006_1 26 RLSAIFTNITHELLTPLSVISASVDKLRD------------TEPQ-- 58

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y + ++ ++r+ rL++++L+ s+ +ag
CP002006_1 59 ---------YSHEYDLMQFNIQRMVRLLQQILETSKSDAG 89

CP002006_0828: domain 1 of 1, from 155 to 224: score 32.1, E = 6.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ + ++H+LR P+++Ir+ + l + s+e++
CP002006_0 155 NRDKMYSVIAHDLRSPMASIRMVLNLVVA----------STSPETVG 191

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
eL e+l+++ re+e +L+++lL ++ ++g
CP002006_0 192 AEL-------YELLDKANRESEDVHDLLDNLLKWTKSQTG 224

CP002006_1933: domain 1 of 1, from 410 to 436: score 30.1, E = 2.3e-08
*->akseflanlsHELRTPLtaIrgyaelL<-*
+k+ f+ n+ H++RTPL+ I+g+a++L
CP002006_1 410 QKTVFIQNVTHQIRTPLNIIMGFAQIL 436


Histogram of all scores:
score obs exp (one = represents 10 sequences)
----- --- ---
-14 7 0|=
-13 24 2|*==
-12 105 63|======*====
-11 274 327|============================ *
-10 502 607|=================================================== *
-9 539 627|====================================================== *
-8 483 469|==============================================*==
-7 346 296|=============================*=====
-6 176 170|================*=
-5 118 93|=========*==
-4 63 50|====*==
-3 40 26|==*=
-2 23 13|=*=
-1 12 7|*=
0 5 3|*
1 4 1|*
2 3 1|*
3 0 0|
4 1 0|=
5 0 0|
6 0 0|
> 7 38 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 102.2071
P(chi-square) = 6.522e-17

Total sequences searched: 2763

Whole sequence top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 33K


Acknowledgements:

This research is funded by:

Developed by: