Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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132 projects found  

1 accessions found for Caulobacter segnis ATCC 21756  

Data for CP002008  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP002008.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP002008_1222 CDS_1354151-1351620 97.8 2.3e-27 1
CP002008_3527 CDS_3988576-3986048 95.7 8.8e-27 1
CP002008_1005 CDS_1110587-1112677 94.4 2.1e-26 1
CP002008_3099 CDS_3488778-3487054 90.9 2e-25 1
CP002008_3747 CDS_4236895-4238559 90.7 2.3e-25 1
CP002008_1698 CDS_1876246-1874309 90.4 2.9e-25 1
CP002008_2371 CDS_2688585-2691077 90.1 3.5e-25 1
CP002008_3259 CDS_3682529-3684337 89.6 4.8e-25 1
CP002008_3116 CDS_3508326-3511712 88.2 1.2e-24 1
CP002008_0830 CDS_919847-921544 87.9 1.4e-24 1
CP002008_0685 CDS_741495-743258 87.9 1.5e-24 1
CP002008_0741 CDS_815584-813668 87.3 2.2e-24 1
CP002008_2828 CDS_3173427-3171409 87.3 2.2e-24 1
CP002008_1171 CDS_1291136-1292980 86.5 3.6e-24 1
CP002008_1037 CDS_1147611-1145545 85.2 8.3e-24 1
CP002008_3753 CDS_4245244-4243823 80.8 1.5e-22 1
CP002008_0675 CDS_727911-726010 79.7 3.2e-22 1
CP002008_0950 CDS_1053498-1055171 79.4 3.8e-22 1
CP002008_0042 CDS_51344-54076 77.4 1.4e-21 1
CP002008_3897 CDS_4413736-4415286 76.3 2.9e-21 1
CP002008_3100 CDS_3488971-3489765 74.6 8.6e-21 1
CP002008_2791 CDS_3136974-3138842 72.9 2.7e-20 1
CP002008_1152 CDS_1274923-1277370 71.3 7.5e-20 1
CP002008_0205 CDS_234099-236408 71.1 8.2e-20 1
CP002008_3987 CDS_4505504-4507258 66.6 1.6e-18 1
CP002008_1795 CDS_2013679-2016357 66.2 2e-18 1
CP002008_3119 CDS_3513099-3514238 64.7 5.3e-18 1
CP002008_0164 CDS_195793-194162 63.5 1.2e-17 1
CP002008_2198 CDS_2489417-2487708 61.3 5.1e-17 1
CP002008_1706 CDS_1887813-1889051 57.9 4.7e-16 1
CP002008_2368 CDS_2686780-2685677 56.4 1.2e-15 1
CP002008_1921 CDS_2158169-2160412 49.8 9.4e-14 1
CP002008_0540 CDS_597850-596510 49.6 1.1e-13 1
CP002008_1919 CDS_2155552-2156682 49.3 1.3e-13 1
CP002008_3863 CDS_4371347-4369239 46.7 6.8e-13 1
CP002008_2006 CDS_2275755-2274148 43.0 7.7e-12 1
CP002008_3869 CDS_4379484-4381238 42.0 1.5e-11 1
CP002008_3498 CDS_3957969-3959456 40.4 4.3e-11 1
CP002008_0669 CDS_718220-720241 39.6 7e-11 1
CP002008_2974 CDS_3343438-3340940 38.3 1.7e-10 1
CP002008_3025 CDS_3405623-3403896 38.3 1.7e-10 1
CP002008_0927 CDS_1025696-1027042 37.4 3.1e-10 1
CP002008_3009 CDS_3386487-3388277 34.6 1.8e-09 1
CP002008_0185 CDS_217210-215810 33.7 3.3e-09 1
CP002008_0397 CDS_418571-420595 31.7 1.2e-08 1
CP002008_3081 CDS_3469833-3467746 31.6 1.3e-08 1
CP002008_2614 CDS_2951273-2952697 28.4 1.1e-07 1
CP002008_0393 CDS_413890-415383 27.1 2.5e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP002008_1222 1/1 601 670 .. 1 87 [] 97.8 2.3e-27
CP002008_3527 1/1 463 528 .. 1 87 [] 95.7 8.8e-27
CP002008_1005 1/1 320 385 .. 1 87 [] 94.4 2.1e-26
CP002008_3099 1/1 315 383 .. 1 87 [] 90.9 2e-25
CP002008_3747 1/1 165 230 .. 1 87 [] 90.7 2.3e-25
CP002008_1698 1/1 266 331 .. 1 87 [] 90.4 2.9e-25
CP002008_2371 1/1 457 522 .. 1 87 [] 90.1 3.5e-25
CP002008_3259 1/1 222 287 .. 1 87 [] 89.6 4.8e-25
CP002008_3116 1/1 460 528 .. 1 87 [] 88.2 1.2e-24
CP002008_0830 1/1 199 264 .. 1 87 [] 87.9 1.4e-24
CP002008_0685 1/1 208 273 .. 1 87 [] 87.9 1.5e-24
CP002008_0741 1/1 265 330 .. 1 87 [] 87.3 2.2e-24
CP002008_2828 1/1 302 368 .. 1 87 [] 87.3 2.2e-24
CP002008_1171 1/1 242 308 .. 1 87 [] 86.5 3.6e-24
CP002008_1037 1/1 319 385 .. 1 87 [] 85.2 8.3e-24
CP002008_3753 1/1 203 270 .. 1 87 [] 80.8 1.5e-22
CP002008_0675 1/1 249 314 .. 1 87 [] 79.7 3.2e-22
CP002008_0950 1/1 321 386 .. 1 87 [] 79.4 3.8e-22
CP002008_0042 1/1 533 598 .. 1 87 [] 77.4 1.4e-21
CP002008_3897 1/1 16 78 .. 4 87 .] 76.3 2.9e-21
CP002008_3100 1/1 38 107 .. 1 87 [] 74.6 8.6e-21
CP002008_2791 1/1 246 311 .. 1 87 [] 72.9 2.7e-20
CP002008_1152 1/1 449 514 .. 1 87 [] 71.3 7.5e-20
CP002008_0205 1/1 540 606 .. 1 87 [] 71.1 8.2e-20
CP002008_3987 1/1 205 270 .. 1 87 [] 66.6 1.6e-18
CP002008_1795 1/1 660 728 .. 1 87 [] 66.2 2e-18
CP002008_3119 1/1 155 220 .. 1 87 [] 64.7 5.3e-18
CP002008_0164 1/1 308 373 .. 1 87 [] 63.5 1.2e-17
CP002008_2198 1/1 203 266 .. 1 87 [] 61.3 5.1e-17
CP002008_1706 1/1 181 244 .. 1 87 [] 57.9 4.7e-16
CP002008_2368 1/1 141 199 .. 1 87 [] 56.4 1.2e-15
CP002008_1921 1/1 506 577 .. 1 87 [] 49.8 9.4e-14
CP002008_0540 1/1 242 300 .. 1 87 [] 49.6 1.1e-13
CP002008_1919 1/1 136 200 .. 1 87 [] 49.3 1.3e-13
CP002008_3863 1/1 314 379 .. 1 87 [] 46.7 6.8e-13
CP002008_2006 1/1 315 385 .. 1 87 [] 43.0 7.7e-12
CP002008_3869 1/1 365 433 .. 1 87 [] 42.0 1.5e-11
CP002008_3498 1/1 260 331 .. 1 87 [] 40.4 4.3e-11
CP002008_0669 1/1 301 369 .. 1 87 [] 39.6 7e-11
CP002008_2974 1/1 446 512 .. 1 87 [] 38.3 1.7e-10
CP002008_3025 1/1 211 276 .. 1 87 [] 38.3 1.7e-10
CP002008_0927 1/1 238 296 .. 1 87 [] 37.4 3.1e-10
CP002008_3009 1/1 217 283 .. 1 87 [] 34.6 1.8e-09
CP002008_0185 1/1 238 303 .. 1 87 [] 33.7 3.3e-09
CP002008_0397 1/1 467 524 .. 1 87 [] 31.7 1.2e-08
CP002008_3081 1/1 315 381 .. 1 87 [] 31.6 1.3e-08
CP002008_2614 1/1 271 328 .. 1 87 [] 28.4 1.1e-07
CP002008_0393 1/1 264 328 .. 1 87 [] 27.1 2.5e-07

Alignments of top-scoring domains:
CP002008_1222: domain 1 of 1, from 601 to 670: score 97.8, E = 2.3e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL+aI g++e++ +e++ ++l++e
CP002008_1 601 AKSEFLANMSHELRTPLNAINGFSEIMMNEMF------GPLGDER-- 639

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ y + i++++++ll+Lind+Ld+s+ieag
CP002008_1 640 ---------YKGYSQDIHSSGQHLLALINDILDMSKIEAG 670

CP002008_3527: domain 1 of 1, from 463 to 528: score 95.7, E = 8.8e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla +sHELRTPL++++g+a++L++ ++l+++q
CP002008_3 463 AKSAFLAVMSHELRTPLNGMLGLAQALRT---------EDLTPQQ-- 498

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re ++ il++++ ll L+nd+Ldls+ieag
CP002008_3 499 ----------REQIDLILDSGDTLLVLLNDILDLSKIEAG 528

CP002008_1005: domain 1 of 1, from 320 to 385: score 94.4, E = 2.1e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++flan+sHE+RTPL++++g a +L e t+l++ q
CP002008_1 320 AKNDFLANMSHEIRTPLNGVIGIAAALGE---------TALTPRQ-- 355

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ i+r++e l+rL++d+Ld s+ieag
CP002008_1 356 ----------AEMVDLIRRSGETLERLVSDILDVSKIEAG 385

CP002008_3099: domain 1 of 1, from 315 to 383: score 90.9, E = 2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +flan+sHELRTPL+aI+g++++++++++ ++ls+
CP002008_3 315 GRARFLANMSHELRTPLNAIMGFSDIMRARMF------GPLSDRY-- 353

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey e i++++ +ll+Lind+Ld+s+iea+
CP002008_3 354 ----------AEYAELIHESGGHLLDLINDVLDMSKIEAE 383

CP002008_3747: domain 1 of 1, from 165 to 230: score 90.7, E = 2.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+eflan+sHE+RTPL++++g+a++L tel++ q
CP002008_3 165 AKTEFLANMSHEIRTPLNGVLGMAQVLAQ---------TELTARQ-- 200

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ ++il++++ l++L++d+Ldl++ eag
CP002008_3 201 ----------REMMDVILNSGRVLNALLSDILDLAKVEAG 230

CP002008_1698: domain 1 of 1, from 266 to 331: score 90.4, E = 2.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+kseflan+sHE+RTP+++I+g + +L + t+l ++q
CP002008_1 266 SKSEFLANMSHEIRTPMNGIIGVVGALAR---------TDLAPKQ-- 301

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++++ ++ +a++l+ L+nd+Ld++r eag
CP002008_1 302 ----------RDMVHLVETSADSLQVLLNDVLDMARVEAG 331

CP002008_2371: domain 1 of 1, from 457 to 522: score 90.1, E = 3.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHELRTPL++++g+a++L+ ++l + +
CP002008_2 457 AKSTFLATMSHELRTPLNGVLGLAQALKL---------EPLEPGE-- 492

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re ++ i+++++ ll L+nd+Ldls+ieag
CP002008_2 493 ----------REQVDLIEDAGRNLLTLLNDVLDLSKIEAG 522

CP002008_3259: domain 1 of 1, from 222 to 287: score 89.6, E = 4.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHE+RTPL++++g+a+++ + +els++q
CP002008_3 222 AKTEFLATMSHEIRTPLNGVLGMAQIMAA---------GELSPDQ-- 257

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+t+ ++++ll+ in +Ld+s+ieag
CP002008_3 258 ----------RRRLDTVTASGQSLLSVINAILDISKIEAG 287

CP002008_3116: domain 1 of 1, from 460 to 528: score 88.2, E = 1.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHELRTPL++++ +++lL ++ + ++l++eq
CP002008_3 460 YKSDFLANMSHELRTPLNSLLILSKLLSDNPN------GNLTAEQ-- 498

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +ti+++++ ll+Lind+Ldls+ieag
CP002008_3 499 ----------VKFAQTIESSGNDLLSLINDILDLSKIEAG 528

CP002008_0830: domain 1 of 1, from 199 to 264: score 87.9, E = 1.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks f+a++sHELRTP+++++g+a++L + t l+ q
CP002008_0 199 SKSAFVAMMSHELRTPMNGVLGLAHALST---------TRLDVRQ-- 234

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey++ i+++++ l ++nd+Ldls+ieag
CP002008_0 235 ----------AEYVDMIIQSGDGLMTILNDILDLSKIEAG 264

CP002008_0685: domain 1 of 1, from 208 to 273: score 87.9, E = 1.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a +sHELRTP+++++g+a++L + ++ls+ q
CP002008_0 208 AKSTFIAVASHELRTPMNGLLGMAHALGR---------SDLSAAQ-- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re ++ ++r++++l +L+nd+Ldlsrie+g
CP002008_0 244 ----------REQVDLMIRSGDSLMHLLNDVLDLSRIETG 273

CP002008_0741: domain 1 of 1, from 265 to 330: score 87.3, E = 2.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP+++++g ++lL++ + ls++
CP002008_0 265 AKSQFLANMSHEIRTPMNGVLGVLHLLKK---------ERLSADG-- 300

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+ +l+++e l++L+nd+ d srieag
CP002008_0 301 ----------RRLLNEALDCGEMLSQLLNDIIDVSRIEAG 330

CP002008_2828: domain 1 of 1, from 302 to 368: score 87.3, E = 2.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +flan+sHELRTPLta++g+a+l ++ +els+e+
CP002008_2 302 VKADFLANMSHELRTPLTAVLGFAQLVER--------QPELSAET-- 338

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y++++ ++++ l++ ind+Ld+s++eag
CP002008_2 339 ----------RAYVQRVTSAGKALRATINDILDFSKLEAG 368

CP002008_1171: domain 1 of 1, from 242 to 308: score 86.5, E = 3.6e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+ HELRTPLtaI+g+ae+L++ ++ l+e
CP002008_1 242 AKSDFLANMTHELRTPLTAIIGFAEVLRR--------SGRLDETA-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ il++++ ll+ +nd+Ld+sr+ea
CP002008_1 279 ----------ARQAGHILDASNTLLSVVNDVLDFSRLEAA 308

CP002008_1037: domain 1 of 1, from 319 to 385: score 85.2, E = 8.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHE+RTPL++++g+a+lL + +++ls++
CP002008_1 319 AKTEFLATMSHEIRTPLNSVLGFAQLLAK--------RDDLSPDA-- 355

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ i++++ l ++d+Ld+sr eag
CP002008_1 356 ----------RRQVNLIDSAGAALVTVLDDILDFSRVEAG 385

CP002008_3753: domain 1 of 1, from 203 to 270: score 80.8, E = 1.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +flan+sHELRTPL++++g++e+L+ ++++++ ++
CP002008_3 203 TRADFLANASHELRTPLASLSGFIETLRG---------HAKDDPGAR 240

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l ++l +aer++rLi+dl+ lsrie +
CP002008_3 241 ----------DKFLAIMLAQAERMSRLIDDLMSLSRIELN 270

CP002008_0675: domain 1 of 1, from 249 to 314: score 79.7, E = 3.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL++++++ae++ + ++l + q
CP002008_0 249 LKSHFLANMSHEIRTPLNGVLAMAEVMDM---------DDLKPAQ-- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l +i++++ ll+ +nd+Ldls+ieag
CP002008_0 285 ----------RERLAVIRESGGLLLAVLNDVLDLSKIEAG 314

CP002008_0950: domain 1 of 1, from 321 to 386: score 79.4, E = 3.8e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ flan+sHE+RTPL++++g+a+++ + ++lse+q
CP002008_0 321 AKTLFLANMSHEIRTPLNGVLGMAQVMAA---------DTLSEPQ-- 356

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++++++a++l +L+nd+Ld++r+e
CP002008_0 357 ----------ARRLRILEESARSLMALLNDILDIARLERR 386

CP002008_0042: domain 1 of 1, from 533 to 598: score 77.4, E = 1.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +flan+sHE+RTP+++++g +++L++ el++ ++
CP002008_0 533 AKAQFLANMSHEIRTPMNGVLGVLHVLKR----------ELPSGEN- 568

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +l +++ l+ L++d+ d+srieag
CP002008_0 569 ----------ADLLGEALAAGQMLSTLLDDVIDISRIEAG 598

CP002008_3897: domain 1 of 1, from 16 to 78: score 76.3, E = 2.9e-21
*->eflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeL
e la+lsHE+RTPL++++g+a lL++ t+l++eq
CP002008_3 16 EQLATLSHEFRTPLNGVLGMARLLEN---------TKLTAEQ----- 48

RledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+ +++++++ll+L+nd+L ++r++a
CP002008_3 49 -------RSYVTALRESGDHLLSLVNDVLHFARLGAA 78

CP002008_3100: domain 1 of 1, from 38 to 107: score 74.6, E = 8.6e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ fl+++sHELRTPL+a++g++e+L el+ ++l+++q
CP002008_3 38 RKRSFLRMVSHELRTPLNAVIGFSEILSHELY------GPLGAPQ-- 76

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yrey +++++++ ll+L+n++ +++r+e
CP002008_3 77 ---------YREYAQIVHESGVKLLKLVNQIVEIARLEGH 107

CP002008_2791: domain 1 of 1, from 246 to 311: score 72.9, E = 2.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL+aI+g+ ++L + ++l+ +q
CP002008_2 246 AKSRFLATVSHEMRTPLNAILGLGQILAR---------SALNKKQ-- 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re + ++ +a+rl+ +i+d+Ldl +++ g
CP002008_2 282 ----------REQVLEMKGAARRLRMMIDDVLDLCQLDDG 311

CP002008_1152: domain 1 of 1, from 449 to 514: score 71.3, E = 7.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHELRTPL+++++ ++ L e e+++ r
CP002008_1 449 AKSVFLANMSHELRTPLNGVIAISDRLAE----------ERDPAVR- 484

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ ++ ++++ l++ ++d+Ld s+ieag
CP002008_1 485 ----------RELAAVVSSSGRLLEQVLSDILDVSKIEAG 514

CP002008_0205: domain 1 of 1, from 540 to 606: score 71.1, E = 8.2e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+s ELRTPLt+I+gy+elL++ ++ +e
CP002008_0 540 LKRDFVGNVSYELRTPLTTIIGYSELLER---------ADGLSERG- 576

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + ++ +a +l r i+d+Ld+++i+ag
CP002008_0 577 ----------RNHVAAVRAAATQLARSIDDVLDMAQIDAG 606

CP002008_3987: domain 1 of 1, from 205 to 270: score 66.6, E = 1.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a++sHELRTP++aI++ a L e+ +e+s++ +
CP002008_3 205 AKSAFVAMISHELRTPISAIMAGATRLHSEV-------PEASSKVQ- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i +++ ++ L+ndlLd+sr+eag
CP002008_3 244 -------------AQLIADAGGLMRGLLNDLLDFSRLEAG 270

CP002008_1795: domain 1 of 1, from 660 to 728: score 66.2, E = 2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s ++ ++sH+LRTPL++++g++ +L +++ ++l + r
CP002008_1 660 FRSALMNSVSHDLRTPLSTVLGASTTLIDYG-------DKLAKPVR- 698

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +i++eaerl+r + +lLd++rie g
CP002008_1 699 ----------DDLVVSIREEAERLNRYVANLLDMTRIEGG 728

CP002008_3119: domain 1 of 1, from 155 to 220: score 64.7, E = 5.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fla l+HELR+P++a+ g ++lL++ + ++e +
CP002008_3 155 HKDNFLAVLAHELRNPVAALGGGLHLLKK----------DIPPERA- 190

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +++r +++l +L++dlLd sr +g
CP002008_3 191 ----------HDIRTRMERMLDHLTHLVDDLLDVSRVSQG 220

CP002008_0164: domain 1 of 1, from 308 to 373: score 63.5, E = 1.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++f+a+++HE+++PLt+Ir ++e+L ++
CP002008_0 308 AIERFAADVAHEIKNPLTSIRSAIETLDL---------VSDPAAR-- 343

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +++++++rl+rL+ d+ sr++a+
CP002008_0 344 ----------ARLLAILQSDVNRLDRLVTDISNASRLDAE 373

CP002008_2198: domain 1 of 1, from 203 to 266: score 61.3, E = 5.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a++sHELRTP++aI a L+ +e +
CP002008_2 203 AKSAFIAMVSHELRTPINAIVNGAASLEG-----------GGEAH-- 236

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + i +++ +++++ndlLdls+ieag
CP002008_2 237 ----------RAASALIADAGLMMRAQLNDLLDLSKIEAG 266

CP002008_1706: domain 1 of 1, from 181 to 244: score 57.9, E = 4.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++++l ++sHELR PLt ++ ++ lL+ s+ +r
CP002008_1 181 AQQRLLHDVSHELRSPLTRLQVAVGLLRQ------------SPNER- 214

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l +++rea rl+rL+ ++L+l+r+ ag
CP002008_1 215 ----------PEMLARVEREAGRLERLLGEVLTLARLKAG 244

CP002008_2368: domain 1 of 1, from 141 to 199: score 56.4, E = 1.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f an++HELRTPL+++r+ +e Lle + +
CP002008_2 141 AQRDFSANAAHELRTPLATLRAQVESLLE-------------PGE-- 172

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +e erl rLi +lL l+ +e g
CP002008_2 173 -------------RQAASEEFERLGRLIAQLLALAEAEGG 199

CP002008_1921: domain 1 of 1, from 506 to 577: score 49.8, E = 9.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ ++HE+++PLt I++ ae L++++ + + +s+ ++
CP002008_1 506 AWKDVARRIAHEIKNPLTPIQLSAERLRRKY-----RKEIASDLET- 546

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++ti+r++ + r+++++ ++r+ a+
CP002008_1 547 ---------FDRCTDTIIRQVGDIGRMVDEFSSFARMPAP 577

CP002008_0540: domain 1 of 1, from 242 to 300: score 49.6, E = 1.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +++ +++
CP002008_0 242 QRTALLASVSHDLRTPLTRLKLEMAMAEP------------------ 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e le ++ ++ ++++i++ L ++r e g
CP002008_0 271 ----------CEQLEAMKGDLAEMEHMIDEYLAFARGEGG 300

CP002008_1919: domain 1 of 1, from 136 to 200: score 49.3, E = 1.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l+HE+++PL++Irg+a+lL++ +s+ +
CP002008_1 136 SVVGLGKMLAHEIKNPLAGIRGAAQLLKT----------GASAVD-- 170

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + i +e++r++rL++++ +s
CP002008_1 171 ----------QPLAQLIVDETDRIRRLVDRMEAFSDNAPT 200

CP002008_3863: domain 1 of 1, from 314 to 379: score 46.7, E = 6.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ LtaI+g+++++++ +e
CP002008_3 314 AIGQLTGGIAHDFNNLLTAIIGNIDMIER---------RSEDERV-- 349

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +++ +er +L +lL +sr ++
CP002008_3 350 ----------KRMAANAREGVERATKLTAQLLAFSRSQQL 379

CP002008_2006: domain 1 of 1, from 315 to 385: score 43.0, E = 7.7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++a+++HE ++PL+aI ++ e+ l++ d +++ + e++
CP002008_2 315 TLGELTASIAHEVNQPLAAIVTNGEAGLRWID-----RPAPDLEEA- 355

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + ++++ e++r +++i +++ l+ +
CP002008_2 356 ----------RAAMQRMIAEGQRASEIIARIRALASNKDP 385

CP002008_3869: domain 1 of 1, from 365 to 433: score 42.0, E = 1.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +a+++HE+++P+++Ir+ a+ l l + + e +
CP002008_3 365 SLGQITAGVAHEINQPVATIRASADNGLLLL-------SCGDREAA- 403

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l ti +er+ r+ ++l+ +sr g
CP002008_3 404 ----------GQTLTTIVAMTERIGRITDELRAFSRKADG 433

CP002008_3498: domain 1 of 1, from 260 to 331: score 40.4, E = 4.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PL+aI ++ ++ l +++ s++ +
CP002008_3 260 AMGEMASTLAHELNQPLSAIANLLTGSRR-----LMERGRESDQAK- 300

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r++++++ +a r + i +++d+ r +a
CP002008_3 301 ---------IRDAIDRAAAQALRAGEVIHRMRDFVRRGAS 331

CP002008_0669: domain 1 of 1, from 301 to 369: score 39.6, E = 7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ L++I+g+ e++ ++l + ++ +
CP002008_0 301 AVGQLTGGLAHDFNNLLAGISGAFEMIGARLA------QGRTGDV-- 339

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl + +a+r +L +lL +sr ++
CP002008_0 340 ----------ERYLAAGQGAARRAAALTHRLLAFSRRQTL 369

CP002008_2974: domain 1 of 1, from 446 to 512: score 38.3, E = 1.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+++++H +++ L+aI gyae++ + e+++ r
CP002008_2 446 AIGAFASGIAHNFNNILSAIGGYAEMAAA---------REATARSR- 482

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ i ++ r +rL++++L +
CP002008_2 483 ----------ARYLREITGAVARARRLVDQILAYGARSPL 512

CP002008_3025: domain 1 of 1, from 211 to 276: score 38.3, E = 1.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++H++++ L + + ++lL++ t ++
CP002008_3 211 AMGQLTGGVAHDFNNLLMVASSGLDLLER---------TSDPARR-- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + i+++++r +L ++lL +sr
CP002008_3 247 ----------ERLRDGIRQAIDRGASLTQQLLAFSRRSPL 276

CP002008_0927: domain 1 of 1, from 238 to 296: score 37.4, E = 3.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++la+++H+LRT Lt + + ae + + +eq
CP002008_0 238 ERTRMLAAIAHDLRTYLTRLTLRAEFIAD-------------PEQ-- 269

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ r++ +++L++d L ++r eag
CP002008_0 270 -------------RTKATRDLAEMSQLLDDTLLFARQEAG 296

CP002008_3009: domain 1 of 1, from 217 to 283: score 34.6, E = 1.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+ +a+lsHE+R+ Lt++ + ++ ++ + ++
CP002008_3 217 SKSDIVATLSHEIRNGLTGVTHVLAAAAG--------RGGRAAPS-- 253

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+ +l++a+ l + +n Ld + +e+g
CP002008_3 254 ----------REQLNAALDAAQDLIAVLNATLDSETAESG 283

CP002008_0185: domain 1 of 1, from 238 to 303: score 33.7, E = 3.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++a+++HEL TPL++I+ + + + ++++e++
CP002008_0 238 ALGALAAAAAHELGTPLATISVVSREMAR----------NATSEEV- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re e ++ +a r+++++++l ++ ++
CP002008_0 274 ----------REDAELLIGQAARCREILQRLTEMPEAQDA 303

CP002008_0397: domain 1 of 1, from 467 to 524: score 31.7, E = 1.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +++++sH+LRTPL+ +r+ +e +
CP002008_0 467 DRTGMVRAISHDLRTPLARMRFKLERAPP------------------ 495

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i r+ ++++++i +L + r e +
CP002008_0 496 -----------SLRAAIGRDMDQMEQMIASVLSFMRDEME 524

CP002008_3081: domain 1 of 1, from 315 to 381: score 31.6, E = 1.3e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ LtaI++ ++ Ll +++ +++
CP002008_3 315 AIGQLAGGVAHDFNNLLTAIQLRLDELLH--------RHPVGDPS-- 351

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ i++ + r +L++ lL +sr ++
CP002008_3 352 ----------YEGLNEIRQTGVRAADLVRKLLAFSRKQTV 381

CP002008_2614: domain 1 of 1, from 271 to 328: score 28.4, E = 1.1e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++ +++H+LRTPLt +++ +e++ +
CP002008_2 271 DRTAMVGAIAHDLRTPLTRLKFRIEAAPD------------------ 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ ++++++++i L + r +
CP002008_2 300 -----------DIRPKLAADIDQMEAMIAATLGFVRDTNR 328

CP002008_0393: domain 1 of 1, from 264 to 328: score 27.1, E = 2.5e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e +a + H+LR+ Lt+ +++++ L + l+++++
CP002008_0 264 ALGEAVAKINHDLRNMLTSAQMASDRLAA-----------LGDPKV- 298

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +++r+++r L +d++ + + ++
CP002008_0 299 ----------AQALPRLERALDRAITLASDVMAYGKSKEP 328


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-15 1 0|=
-14 6 0|=
-13 37 3|*==
-12 142 94|======*====
-11 350 490|========================= *
-10 683 910|================================================= *
-9 788 939|========================================================= *
-8 782 703|==================================================*=====
-7 523 443|===============================*======
-6 342 255|==================*======
-5 180 140|=========*===
-4 114 74|=====*===
-3 59 39|==*==
-2 35 20|=*=
-1 29 10|*==
0 8 5|*
1 5 2|*
2 2 1|*
3 1 0|=
4 0 0|
> 5 52 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 280.1446
P(chi-square) = 0

Total sequences searched: 4139

Whole sequence top hits:
tophits_s report:
Total hits: 48
Satisfying E cutoff: 48
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 48
Satisfying E cutoff: 48
Total memory: 40K


Acknowledgements:

This research is funded by:

Developed by: