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Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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106 projects found  

1 accessions found for Streptomyces bingchenggensis BCW-1  

Data for CP002047  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP002047.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP002047_3357 CDS_4363667-4358223 93.6 8.4e-26 1
CP002047_5240 CDS_6450157-6448430 89.7 1.1e-24 1
CP002047_2895 CDS_3796081-3797586 88.0 3.2e-24 1
CP002047_8153 CDS_9645858-9650060 87.5 4.7e-24 1
CP002047_0291 CDS_325210-322661 76.5 6.1e-21 1
CP002047_3882 CDS_4977686-4978945 74.6 2.2e-20 1
CP002047_2541 CDS_3384502-3383333 74.4 2.4e-20 1
CP002047_3259 CDS_4242971-4240398 73.7 3.7e-20 1
CP002047_1952 CDS_2620257-2619145 72.7 7.1e-20 1
CP002047_4643 CDS_5793187-5794761 72.3 9.5e-20 1
CP002047_0844 CDS_1240611-1242161 72.2 9.9e-20 1
CP002047_0405 CDS_474794-476359 71.8 1.3e-19 2
CP002047_4715 CDS_5869772-5871256 70.8 2.4e-19 1
CP002047_9044 CDS_10726665-10723201 70.1 3.9e-19 1
CP002047_6572 CDS_7928744-7930417 67.4 2.3e-18 1
CP002047_2943 CDS_3848196-3846703 66.0 5.9e-18 1
CP002047_2078 CDS_2836705-2838042 65.5 8e-18 1
CP002047_4993 CDS_6178535-6177246 63.0 4.2e-17 1
CP002047_9066 CDS_10761595-10760354 62.1 7.1e-17 1
CP002047_6494 CDS_7832872-7834962 62.0 7.6e-17 1
CP002047_5973 CDS_7259133-7257835 55.8 4.4e-15 1
CP002047_1153 CDS_1640889-1639375 55.7 4.6e-15 1
CP002047_9997 CDS_11906020-11907495 55.4 5.6e-15 1
CP002047_0297 CDS_335448-332977 55.2 6.5e-15 1
CP002047_3329 CDS_4328564-4327158 54.3 1.2e-14 1
CP002047_7329 CDS_8741261-8739951 53.9 1.5e-14 1
CP002047_5117 CDS_6308718-6309779 51.3 8.3e-14 1
CP002047_3267 CDS_4249592-4248348 51.3 8.3e-14 1
CP002047_2086 CDS_2844827-2843427 51.3 8.6e-14 1
CP002047_5046 CDS_6240380-6238971 50.4 1.5e-13 1
CP002047_2805 CDS_3689105-3687822 47.6 9.1e-13 1
CP002047_1403 CDS_1950157-1951425 47.2 1.2e-12 1
CP002047_7378 CDS_8794864-8793407 44.6 6.5e-12 1
CP002047_9578 CDS_11395755-11394073 43.3 1.6e-11 1
CP002047_9516 CDS_11324552-11323527 40.7 8.2e-11 1
CP002047_4520 CDS_5656323-5655058 39.0 2.5e-10 1
CP002047_5559 CDS_6805025-6803748 38.9 2.8e-10 1
CP002047_2531 CDS_3371865-3370387 38.4 3.7e-10 1
CP002047_2237 CDS_3051860-3052585 30.2 8e-08 1
CP002047_9601 CDS_11419237-11420688 28.1 3.1e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP002047_3357 1/1 1326 1394 .. 1 87 [] 93.6 8.4e-26
CP002047_5240 1/1 288 355 .. 1 87 [] 89.7 1.1e-24
CP002047_2895 1/1 265 332 .. 1 87 [] 88.0 3.2e-24
CP002047_8153 1/1 930 998 .. 1 87 [] 87.5 4.7e-24
CP002047_0291 1/1 616 684 .. 1 87 [] 76.5 6.1e-21
CP002047_3882 1/1 169 233 .. 1 87 [] 74.6 2.2e-20
CP002047_2541 1/1 156 224 .. 1 87 [] 74.4 2.4e-20
CP002047_3259 1/1 624 692 .. 1 87 [] 73.7 3.7e-20
CP002047_1952 1/1 150 214 .. 1 87 [] 72.7 7.1e-20
CP002047_4643 1/1 261 328 .. 1 87 [] 72.3 9.5e-20
CP002047_0844 1/1 253 320 .. 1 87 [] 72.2 9.9e-20
CP002047_4715 1/1 244 311 .. 1 87 [] 70.8 2.4e-19
CP002047_9044 1/1 343 408 .. 1 87 [] 70.1 3.9e-19
CP002047_0405 1/2 287 354 .. 1 87 [] 69.9 4.6e-19
CP002047_6572 1/1 329 393 .. 1 87 [] 67.4 2.3e-18
CP002047_2943 1/1 258 325 .. 1 87 [] 66.0 5.9e-18
CP002047_2078 1/1 233 297 .. 1 87 [] 65.5 8e-18
CP002047_4993 1/1 155 221 .. 1 87 [] 63.0 4.2e-17
CP002047_9066 1/1 193 251 .. 1 87 [] 62.1 7.1e-17
CP002047_6494 1/1 337 404 .. 1 87 [] 62.0 7.6e-17
CP002047_5973 1/1 213 271 .. 1 87 [] 55.8 4.4e-15
CP002047_1153 1/1 282 347 .. 1 87 [] 55.7 4.6e-15
CP002047_9997 1/1 269 334 .. 1 87 [] 55.4 5.6e-15
CP002047_0297 1/1 601 669 .. 1 87 [] 55.2 6.5e-15
CP002047_3329 1/1 250 313 .. 1 87 [] 54.3 1.2e-14
CP002047_7329 1/1 213 278 .. 1 87 [] 53.9 1.5e-14
CP002047_5117 1/1 135 202 .. 1 87 [] 51.3 8.3e-14
CP002047_3267 1/1 193 259 .. 1 87 [] 51.3 8.3e-14
CP002047_2086 1/1 250 317 .. 1 87 [] 51.3 8.6e-14
CP002047_5046 1/1 243 314 .. 1 87 [] 50.4 1.5e-13
CP002047_2805 1/1 200 265 .. 1 87 [] 47.6 9.1e-13
CP002047_1403 1/1 194 259 .. 1 87 [] 47.2 1.2e-12
CP002047_7378 1/1 272 333 .. 1 87 [] 44.6 6.5e-12
CP002047_9578 1/1 344 410 .. 1 87 [] 43.3 1.6e-11
CP002047_9516 1/1 112 176 .. 1 87 [] 40.7 8.2e-11
CP002047_4520 1/1 198 263 .. 1 87 [] 39.0 2.5e-10
CP002047_5559 1/1 186 252 .. 1 87 [] 38.9 2.8e-10
CP002047_2531 1/1 242 306 .. 1 87 [] 38.4 3.7e-10
CP002047_2237 1/1 24 88 .. 5 87 .] 30.2 8e-08
CP002047_9601 1/1 242 316 .. 1 87 [] 28.1 3.1e-07

Alignments of top-scoring domains:
CP002047_3357: domain 1 of 1, from 1326 to 1394: score 93.6, E = 8.4e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ +a+lL +++d ++ls++q
CP002047_3 1326 YKSEFLANMSHELRTPLNSLLILAKLLADNAD------GNLSPKQ-- 1364

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ eti+ ++ ll+Lind+Ldls+ eag
CP002047_3 1365 ----------VEFAETIHGAGSDLLQLINDILDLSKVEAG 1394

CP002047_5240: domain 1 of 1, from 288 to 355: score 89.7, E = 1.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a++sHELRTPL++Irgyael ++ g++e ++++
CP002047_5 288 RVRQFVADASHELRTPLASIRGYAELTRR-------GREEIGPDT-- 325

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l ++++ea r+ L++dlL l+r++ag
CP002047_5 326 ----------RHALGRVESEAARMTGLVEDLLLLARLDAG 355

CP002047_2895: domain 1 of 1, from 265 to 332: score 88.0, E = 3.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTP++ +rg+ael+l+ + ++ ++e
CP002047_2 265 RLRQFAADASHELRTPVANVRGHAELALR-------HHGPVPAEV-- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +le+i++e++r++ L++dlL l+r++ag
CP002047_2 303 ----------RHALERIQSESQRMSTLVDDLLLLARLDAG 332

CP002047_8153: domain 1 of 1, from 930 to 998: score 87.5, E = 4.7e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ +a lL + d+ lse++
CP002047_8 930 YKSEFLANMSHELRTPLNSLLILARLLAD------NPDGRLSEQE-- 968

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ti+r++ ll+Lind+Ldls+ieag
CP002047_8 969 ----------EQFATTIHRSGSDLLQLINDILDLSKIEAG 998

CP002047_0291: domain 1 of 1, from 616 to 684: score 76.5, E = 6.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +la++sH+LRTPL++I+++++ L+ +d ++see++
CP002047_0 616 IRTALLAAVSHDLRTPLAGIKAAVSSLRS-------EDVAWSEEDQ- 654

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le i++ a+rl+ L+ +lLd+sr+++g
CP002047_0 655 ----------AELLEAIEEGADRLDLLVGNLLDMSRLQTG 684

CP002047_3882: domain 1 of 1, from 169 to 233: score 74.6, E = 2.2e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ e++an+sHELRTP++a+r+ +e +++ +e+++e++
CP002047_3 169 QRKEMVANVSHELRTPIAALRAVLENVVDGV-------SEADPETM- 207

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++lr++erl rL+++lLdlsr++ g
CP002047_3 208 --------------RIALRQTERLGRLVEQLLDLSRLDKG 233

CP002047_2541: domain 1 of 1, from 156 to 224: score 74.4, E = 2.4e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e++a+++HELR PLt+++g++ +Ll+ +++ +++q+
CP002047_2 156 SHAELIATVAHELRSPLTSVKGFTATLLA-------KWERFTDDQK- 194

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +let++ +a+r rLi +lLd+sri++g
CP002047_2 195 ----------RLMLETVDADANRVTRLIAELLDISRIDSG 224

CP002047_3259: domain 1 of 1, from 624 to 692: score 73.7, E = 3.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +la++sH+LRTPL+aI+++++ L+ d ++s+e+
CP002047_3 624 IRTALLAAVSHDLRTPLAAIKAAVSSLRS-------DDVAWSPEDE- 662

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+le i++ a+rl++L+ +lLd+sr+++g
CP002047_3 663 ----------AELLEGIEQGADRLDHLVGNLLDMSRLQTG 692

CP002047_1952: domain 1 of 1, from 150 to 214: score 72.7, E = 7.1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++a +sH+LRTPL+++r+++e+L++ + + +++
CP002047_1 150 SRRELVAWISHDLRTPLAGLRAMSEALED---------GVAADPD-- 185

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ i+ e+erl++++ dl +lsri ag
CP002047_1 186 -----------RYLRQIRTEVERLNDMVGDLFELSRIHAG 214

CP002047_4643: domain 1 of 1, from 261 to 328: score 72.3, E = 9.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a++sHELRTPLtaI + +e+L+e +t++ ++ +
CP002047_4 261 SSRRFVADMSHELRTPLTAITAVTEVLEE--------ETDALDPMI- 298

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ + +e++rl++L+++l++ +r +ag
CP002047_4 299 ----------APAVQLVVSETRRLNDLVENLMEVTRFDAG 328

CP002047_0844: domain 1 of 1, from 253 to 320: score 72.2, E = 9.9e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++ HELRTPLt+I+g+ael+l+ +++ s+e
CP002047_0 253 RLRRFVADAGHELRTPLTSIQGFAELALR-------HEGRSSAER-- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ + i + aer++ L++dlL l++++ +
CP002047_0 291 ----------READRLIVQNAERISLLVDDLLLLAKLDKE 320

CP002047_4715: domain 1 of 1, from 244 to 311: score 70.8, E = 2.4e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTPL+aIrgy++l +++++ + +e
CP002047_4 244 QLRRFIADASHELRTPLAAIRGYLQLDEKGMF-------KDEAER-- 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++ eaer+ rL+++lL l+r+++
CP002047_4 282 ----------ARAMARMNAEAERMARLVDELLALARLDQR 311

CP002047_9044: domain 1 of 1, from 343 to 408: score 70.1, E = 3.9e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f++n+sHE+RTPLt ++g ++ +l e +e
CP002047_9 343 AKTTFFSNVSHEFRTPLTLLLGPVQQALS---------VEDRPER-- 378

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ le ++r+a rll+L+n lLd sr+eag
CP002047_9 379 ----------RRQLELAERSALRLLKLVNTLLDVSRAEAG 408

CP002047_0405: domain 1 of 2, from 287 to 354: score 69.9, E = 4.6e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHELRTPL +I+g++el ++ + ++e +
CP002047_0 287 LMRRFIADASHELRTPLFGIKGFTELYRM---------GGMPERT-- 322

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++i+rea rl rL++dlL l+r+++
CP002047_0 323 --------DVDAAMSRIEREAARLVRLVEDLLLLARLDEH 354

CP002047_6572: domain 1 of 1, from 329 to 393: score 67.4, E = 2.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++ +++HELRTPL+ +rgy+e+L++ + ++e
CP002047_6 329 RQRRLVGDVAHELRTPLANLRGYLEALRD---------GVVDPEP-- 364

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l ++++e+ +r+++dl dl+ +eag
CP002047_6 365 -----------ELLASLHEEVLLQQRIVDDLQDLALAEAG 393

CP002047_2943: domain 1 of 1, from 258 to 325: score 66.0, E = 5.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f++++sHELRTPL+++++ +e+L e++ + l +++
CP002047_2 258 RARRFASDVSHELRTPLAGMLAVTEVLDEDA-------ARLAPDT-- 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ i e+ l L++dl+++sr +ag
CP002047_2 296 ----------AAAVRLISAETGKLAVLVEDLMEISRFDAG 325

CP002047_2078: domain 1 of 1, from 233 to 297: score 65.5, E = 8e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+a++sHELRTPLt++++ +e L+ + te + +
CP002047_2 233 RQRAFVADASHELRTPLTVLSLRLENLEP-------HLTEDGTGE-- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l e++rl rL +dlL+l+r eag
CP002047_2 271 -------------FAEALAEVDRLGRLMEDLLTLARVEAG 297

CP002047_4993: domain 1 of 1, from 155 to 221: score 63.0, E = 4.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHEL+TP+ a+++++e+ + + ++e +
CP002047_4 155 VRRDFVANVSHELKTPVGALSLLSEAVMD---------ASDDPEAV- 191

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++ ea rl +L+++l dlsr ++
CP002047_4 192 ----------TRFAGRMQIEATRLTSLVQELIDLSRVQND 221

CP002047_9066: domain 1 of 1, from 193 to 251: score 62.1, E = 7.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HELRTPL ++ ++aelL
CP002047_9 193 REQRFTADVAHELRTPLMGLVTAAELLPP------------------ 221

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ +++ ++ l+ L++dlL++sr++ag
CP002047_9 222 ----------GEAAGYVRDRVRVLSTLVEDLLEISRLDAG 251

CP002047_6494: domain 1 of 1, from 337 to 404: score 62.0, E = 7.6e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f++++sHELRTPLt++r++a+++ + +++ ++ +
CP002047_6 337 MQRRFVSDVSHELRTPLTTVRMAADVIHD-------AREDFDPIT-- 374

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ e + +++r ++L++dlL++sr +ag
CP002047_6 375 ----------ARSAELLWGQVDRFESLLSDLLEISRFDAG 404

CP002047_5973: domain 1 of 1, from 213 to 271: score 55.8, E = 4.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ +a+++HELRTP+t+++++aelL
CP002047_5 213 AERRVTADIAHELRTPVTGLLTAAELLPP------------------ 241

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +e +++ a+ +++L++d+L+ +r++
CP002047_5 242 ----------GRPTELVRDRAQAMRQLVEDVLEVARLDGF 271

CP002047_1153: domain 1 of 1, from 282 to 347: score 55.7, E = 4.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a+++HELR PLt++++ +e++l+ ++++t++++
CP002047_1 282 QQRRFVADAAHELRSPLTTLLASLEVALA-----YPERTDWPAAV-- 321

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
t+ r+++rl +L +dlL l+r+++
CP002047_1 322 --------------TTASRQTRRLHALAEDLLLLARLDTR 347

CP002047_9997: domain 1 of 1, from 269 to 334: score 55.4, E = 5.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a+++HELR PLt++++ +e++l+ ++++t++++
CP002047_9 269 EQRRFVADAAHELRSPLTTLLASLEVALA-----YPERTDWPAAA-- 308

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
t+ r+++rl +L +dlL l+r+++
CP002047_9 309 --------------TTAARQTRRLHALAEDLLLLARLDTR 334

CP002047_0297: domain 1 of 1, from 601 to 669: score 55.2, E = 6.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l+++ H+LRTPL+a +++ L+ +d e s+e+r
CP002047_0 601 MRTALLRAVGHDLRTPLAAGWAAVTSLRS-------RDVEFSDEDR- 639

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l t+++++ l+rL+++lLdlsr++ag
CP002047_0 640 ----------DELLATADESLAKLNRLVENLLDLSRLQAG 669

CP002047_3329: domain 1 of 1, from 250 to 313: score 54.3, E = 1.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+a++sH+LR+PL+a+++ +elL +l++ +
CP002047_3 250 QQRAFVADASHQLRNPLSALLLRIELLAL----------DLPDGH-- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e + +++ e++rl + ++dlLdl+ +e+
CP002047_3 285 -----------EEIASVRTEGKRLAQVLDDLLDLALAEHS 313

CP002047_7329: domain 1 of 1, from 213 to 278: score 53.9, E = 1.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELR P++a+r+ +el+l+ ++ +++
CP002047_7 213 RQRQFVADASHELRSPIAAVRTQLELALA--------RPSRTD---- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++++l+++erl++ +dlL l+r++a+
CP002047_7 248 ---------WPTAVHKALQDTERLQAVASDLLLLARLDAQ 278

CP002047_5117: domain 1 of 1, from 135 to 202: score 51.3, E = 8.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+an+sHELRTPL+++r+++e++l+ d++++ +++
CP002047_5 135 AQRHFVANASHELRTPLAGLRTLLEVALA--------DPDADTDTL- 172

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + + +l + + +rL+ lL l+ e g
CP002047_5 173 ----------RSACQEALALGGHQERLVKALLVLATSERG 202

CP002047_3267: domain 1 of 1, from 193 to 259: score 51.3, E = 8.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+an+sHELRTPL+ r+++e+ l +++ ++++
CP002047_3 193 AQQRFVANASHELRTPLAINRTLLEVQLS---------DPQASPDL- 229

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +t+l er ++L++ lL l+r +++
CP002047_3 230 ----------TQLGKTLLATNERSEQLVEGLLLLARSDNE 259

CP002047_2086: domain 1 of 1, from 250 to 317: score 51.3, E = 8.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++ ++ HELRTPLt++r++++lL++ +el++ r
CP002047_2 250 DQRRLVQDAGHELRTPLTSLRTNISLLRR--------FEELPPAAR- 287

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l + e++ l +L+n++ l+ +
CP002047_2 288 ----------EELLADLAGETRELTDLVNEVVSLAAGQGD 317

CP002047_5046: domain 1 of 1, from 243 to 314: score 50.4, E = 1.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a++ HELRTPLt++r+++elL + +e + ++
CP002047_5 243 RQQQLIADAGHELRTPLTSLRTNIELLAR---------SEETGRPLP 280

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p+ R + + +++ + l +Li dl +lsr +a
CP002047_5 281 PADR------KALMASVKAQMTELAALIGDLQELSRPDAL 314

CP002047_2805: domain 1 of 1, from 200 to 265: score 47.6, E = 9.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHELR PL+++r+ +e l+ + + +
CP002047_2 200 LQQRFIADASHELRSPLAGLRASLESSLT----------HPDGVD-- 234

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ +lr++ rl++L dlL l++++ g
CP002047_2 235 ---------WEARVRDALRDIVRLQNLSHDLLLLAQLDGG 265

CP002047_1403: domain 1 of 1, from 194 to 259: score 47.2, E = 1.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f++++sHELR PLt++++ +el+l+ +++
CP002047_1 194 RLRTFTSDASHELRGPLTTLKARLELALA-----------RPDRA-- 227

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + +lr++ rl++++ dlL l+r++a
CP002047_1 228 --------EWTAVGSEALRDTTRLEDIVADLLLLARLDAR 259

CP002047_7378: domain 1 of 1, from 272 to 333: score 44.6, E = 6.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELR P++++r+ +e++ + +
CP002047_7 272 RQHRFVADASHELRSPIASLRTQLEVAVA-------------HSE-- 303

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +l+++ rl++L dlL l+r++ag
CP002047_7 304 ----------LLDVEGVLEDVIRLQHLAADLLLLARLDAG 333

CP002047_9578: domain 1 of 1, from 344 to 410: score 43.3, E = 1.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ lsHELRTPLt I++ ++ ++ ++++ ++
CP002047_9 344 HEQQLTGELSHELRTPLTRIIMELDWWRA---------RPRTDAET- 380

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + e+i ++a++++ + + lL +r a
CP002047_9 381 ----------RAAQEVIAEAAQSMRTICDTLLNDARENAL 410

CP002047_9516: domain 1 of 1, from 112 to 176: score 40.7, E = 8.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHELRTPL+ r++++++++ + + +q
CP002047_9 112 EQQRFAANASHELRTPLAISRTLLDAARN----------DPTRDQ-- 146

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++e+++ r +L + lL lsr++
CP002047_9 147 ----------GELIERLHTVNTRAINLTEGLLLLSRADRR 176

CP002047_4520: domain 1 of 1, from 198 to 263: score 39.0, E = 2.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++a++sH+LRTPLta+++ +e + t+ +e
CP002047_4 198 AERRLAADASHQLRTPLTALSMRLEEITL---------TDDPETV-- 233

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++l ++erl + +++lL+ sr
CP002047_4 234 ----------KEEATIALAQVERLTDVVQRLLTNSRDPRT 263

CP002047_5559: domain 1 of 1, from 186 to 252: score 38.9, E = 2.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHELRTPLt r+++e++ + ++se+
CP002047_5 186 GQRRFVANASHELRTPLTLGRALVEVAMH--------RRTASEDV-- 222

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ et+l+ r +rLi lL l+ e++
CP002047_5 223 ----------KQLGETLLEINARHERLITGLLLLASSENE 252

CP002047_2531: domain 1 of 1, from 242 to 306: score 38.4, E = 3.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ +sH+L+TPL+a+r+ ++ L+ ++ + ++
CP002047_2 242 SQRAFAGEASHQLKTPLAALRLRLDNLEPDV-----------AGHA- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l + e++rl r+++ lL ++r+e+
CP002047_2 277 ----------RAGLTAAMTETDRLARMVEGLLAMARMEES 306

CP002047_2237: domain 1 of 1, from 24 to 88: score 30.2, E = 8e-08
*->flanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLR
++a ++H+ R PL+++r+ +elL++ l t +s +
CP002047_2 24 MAAVAAHQVRGPLSSVRLRLELLRDTL-------TGASHTAA----- 58

ledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ +l+e++rl++ ++++L + g
CP002047_2 59 ------RREVSGVLHEVDRLSHVLEQVLAWGTVDRG 88

CP002047_9601: domain 1 of 1, from 242 to 316: score 28.1, E = 3.1e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldk...vlagdtelsee
a++ ++ +++HEL+TPLt++r+++elL + ld+++++ d++l++e
CP002047_9 242 AQRLLAEDAAHELKTPLTSLRLNVELLIR-LDRrgtL---DSALPAE 284

qrlpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++l+ + ++ l+ L +l dl+r +
CP002047_9 285 SR-----------TRLLNDLGAQVAELSTLAAELTDLARGDVS 316


Histogram of all scores:
score obs exp (one = represents 33 sequences)
----- --- ---
-15 5 0|=
-14 27 0|=
-13 153 7|*====
-12 436 229|======*=======
-11 979 1188|============================== *
-10 1603 2203|================================================= *
-9 1939 2275|==========================================================*
-8 1700 1703|===================================================*
-7 1275 1073|================================*======
-6 806 618|==================*======
-5 478 339|==========*====
-4 251 181|=====*==
-3 141 95|==*==
-2 82 50|=*=
-1 46 26|*=
0 19 13|*
1 18 7|*
2 13 3|*
3 1 1|*
4 3 1|*
5 1 0|=
6 1 0|=
7 0 0|
8 0 0|
9 1 0|=
10 0 0|
11 1 0|=
12 0 0|
13 0 0|
14 1 0|=
15 0 0|
> 16 42 -|==


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 3505.0337
P(chi-square) = 0

Total sequences searched: 10022

Whole sequence top hits:
tophits_s report:
Total hits: 40
Satisfying E cutoff: 40
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 40
Satisfying E cutoff: 40
Total memory: 37K


Acknowledgements:

This research is funded by:

Developed by: