Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
39 projects found  

3 accessions found for 'Nostoc azollae' 0708  

Data for CP002059  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP002059.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP002059_0544 CDS_828188-830197 97.3 2.7e-27 1
CP002059_2951 CDS_4297768-4293800 95.4 9.5e-27 1
CP002059_2467 CDS_3596903-3598975 94.3 1.9e-26 1
CP002059_3495 CDS_5193170-5190162 92.9 4.8e-26 1
CP002059_1537 CDS_2290516-2292357 90.6 2.2e-25 1
CP002059_3097 CDS_4552984-4555821 86.1 4.1e-24 1
CP002059_0663 CDS_995010-996350 84.6 1.1e-23 1
CP002059_2409 CDS_3512184-3510403 84.3 1.4e-23 2
CP002059_3328 CDS_4956503-4958227 82.0 6.1e-23 1
CP002059_0390 CDS_585863-583941 79.6 2.8e-22 1
CP002059_3500 CDS_5201558-5198202 78.5 6e-22 1
CP002059_2120 CDS_3088463-3085455 77.5 1.1e-21 1
CP002059_0208 CDS_291661-289007 73.3 1.7e-20 2
CP002059_1649 CDS_2471036-2475259 70.6 1e-19 1
CP002059_2242 CDS_3289311-3291365 67.2 9.2e-19 1
CP002059_0431 CDS_649845-651209 63.7 9.1e-18 1
CP002059_1629 CDS_2428783-2425241 63.3 1.2e-17 1
CP002059_1939 CDS_2828524-2827193 61.7 3.4e-17 1
CP002059_1550 CDS_2313185-2311722 60.7 6.3e-17 1
CP002059_2955 CDS_4301994-4303145 60.7 6.5e-17 1
CP002059_0328 CDS_476759-480175 60.2 9.1e-17 1
CP002059_2021 CDS_2929323-2931329 58.4 2.9e-16 1
CP002059_1204 CDS_1791521-1790022 58.3 3.1e-16 1
CP002059_3425 CDS_5090938-5089976 53.5 7.3e-15 1
CP002059_0578 CDS_870859-869315 53.4 7.7e-15 1
CP002059_0174 CDS_224398-220142 50.5 5e-14 1
CP002059_2666 CDS_3863867-3865468 49.1 1.3e-13 1
CP002059_0425 CDS_640278-641465 44.9 2e-12 1
CP002059_0678 CDS_1012161-1014194 43.0 6.5e-12 1
CP002059_1933 CDS_2819358-2820734 42.3 1.1e-11 1
CP002059_0664 CDS_996397-997521 40.6 3.2e-11 1
CP002059_2952 CDS_4299416-4298355 37.2 2.9e-10 1
CP002059_2685 CDS_3878610-3880367 31.1 1.5e-08 2
CP002059_1466 CDS_2180915-2179509 29.5 4.6e-08 2
CP002059_3470 CDS_5149763-5148150 28.6 7.9e-08 2

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP002059_0544 1/1 396 464 .. 1 87 [] 97.3 2.7e-27
CP002059_2951 1/1 847 913 .. 1 87 [] 95.4 9.5e-27
CP002059_2467 1/1 294 359 .. 1 87 [] 94.3 1.9e-26
CP002059_3495 1/1 533 599 .. 1 87 [] 92.9 4.8e-26
CP002059_1537 1/1 231 299 .. 1 87 [] 90.6 2.2e-25
CP002059_3097 1/1 468 534 .. 1 87 [] 86.1 4.1e-24
CP002059_0663 1/1 173 241 .. 1 87 [] 84.6 1.1e-23
CP002059_2409 1/2 339 405 .. 1 87 [] 82.9 3.3e-23
CP002059_3328 1/1 337 406 .. 1 87 [] 82.0 6.1e-23
CP002059_0390 1/1 411 479 .. 1 87 [] 79.6 2.8e-22
CP002059_3500 1/1 405 473 .. 1 87 [] 78.5 6e-22
CP002059_2120 1/1 625 691 .. 1 87 [] 77.5 1.1e-21
CP002059_1649 1/1 1020 1086 .. 1 87 [] 70.6 1e-19
CP002059_2242 1/1 384 451 .. 1 87 [] 67.2 9.2e-19
CP002059_0208 2/2 653 722 .. 1 87 [] 66.3 1.7e-18
CP002059_0431 1/1 203 273 .. 1 87 [] 63.7 9.1e-18
CP002059_1629 1/1 538 602 .. 1 87 [] 63.3 1.2e-17
CP002059_1939 1/1 190 254 .. 1 87 [] 61.7 3.4e-17
CP002059_1550 1/1 256 322 .. 1 87 [] 60.7 6.3e-17
CP002059_2955 1/1 157 225 .. 1 87 [] 60.7 6.5e-17
CP002059_0328 1/1 912 980 .. 1 87 [] 60.2 9.1e-17
CP002059_2021 1/1 428 495 .. 1 87 [] 58.4 2.9e-16
CP002059_1204 1/1 271 339 .. 1 87 [] 58.3 3.1e-16
CP002059_3425 1/1 69 136 .. 1 87 [] 53.5 7.3e-15
CP002059_0578 1/1 231 293 .. 1 81 [. 53.4 7.7e-15
CP002059_0174 1/1 1049 1116 .. 1 87 [] 50.5 5e-14
CP002059_2666 1/1 304 372 .. 1 87 [] 49.1 1.3e-13
CP002059_0425 1/1 162 237 .. 1 87 [] 44.9 2e-12
CP002059_0678 1/1 438 504 .. 1 87 [] 43.0 6.5e-12
CP002059_1933 1/1 188 254 .. 1 87 [] 42.3 1.1e-11
CP002059_0664 1/1 141 209 .. 1 87 [] 40.6 3.2e-11
CP002059_2952 1/1 19 81 .. 1 87 [] 37.2 2.9e-10

Alignments of top-scoring domains:
CP002059_0544: domain 1 of 1, from 396 to 464: score 97.3, E = 2.7e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f++n+sHELRTPL I++y+e+L +++ ++l++e+r
CP002059_0 396 AKSQFISNISHELRTPLFNIKTYIETLHDYG-------EDLGAEER- 434

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+let+ +e++rl rL+nd+Ldls++e+g
CP002059_0 435 ----------QEFLETVNHETDRLTRLVNDVLDLSKLESG 464

CP002059_2951: domain 1 of 1, from 847 to 913: score 95.4, E = 9.5e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL+aI+g+++++ + d l+ e+
CP002059_2 847 AKSEFLANMSHELRTPLNAIMGFTQVMSR--------DISLNQEH-- 883

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i r++++ll+Lind+L++s+ieag
CP002059_2 884 ----------QSHLDIINRSGQHLLELINDVLEMSKIEAG 913

CP002059_2467: domain 1 of 1, from 294 to 359: score 94.3, E = 1.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+n+sHE+RTP+++++ +aelL + +lseeq
CP002059_2 294 AKSEFLSNMSHEIRTPMNGVICMAELLSM---------KNLSEEQ-- 329

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ti+++++ ll +ind+Ld+s+ie+g
CP002059_2 330 ----------QDIVQTIRDSGNALLVIINDILDFSKIESG 359

CP002059_3495: domain 1 of 1, from 533 to 599: score 92.9, E = 4.8e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHELRTPL+aI+g++++L ++ + ls e+
CP002059_3 533 AKSQFLAKMSHELRTPLNAILGFTQILTRN--------SSLSQED-- 569

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l++i r++e+ll+Lind+L++s+ieag
CP002059_3 570 ----------QENLDIISRSGEHLLSLINDVLEMSKIEAG 599

CP002059_1537: domain 1 of 1, from 231 to 299: score 90.6, E = 2.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++flan sHE+RTPL++I+g+++lLl++++ e + +
CP002059_1 231 LKNQFLANTSHEIRTPLSSIIGFTHLLLAQGY-------EPERQRH- 269

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl++i++++++ll+Lind+Ldls+iea+
CP002059_1 270 ----------QEYLHIIQSSGKHLLDLINDILDLSKIEAN 299

CP002059_3097: domain 1 of 1, from 468 to 534: score 86.1, E = 4.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL++I+g+a++L+ ++++ ++
CP002059_3 468 AKSEFLANMSHELRTPLNGILGFAQVLEV--------SPTMEQKD-- 504

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re +++i++++ +ll Lind+Ldls+iea
CP002059_3 505 ----------REGVNIIYQCGSHLLLLINDILDLSKIEAR 534

CP002059_0663: domain 1 of 1, from 173 to 241: score 84.6, E = 1.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++fla++sHE+RTP++aI+g++++Ll+ ++ + l+++q
CP002059_0 173 LKTKFLATISHEFRTPMNAIIGFSQILLR------PKFGQLNSQQ-- 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e+il+ +++ll L+n++Ld+s++e+g
CP002059_0 212 ----------VDMVERILNNGKHLLMLLNEVLDFSKLESG 241

CP002059_2409: domain 1 of 2, from 339 to 405: score 82.9, E = 3.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTPL++++g+++l+le++ + ++e+
CP002059_2 339 LKSEFLANVSHEIRTPLNGMIGLLKLILEGM--------ADGPEE-- 375

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ +++ + +ll ++nd+Ld+++ieag
CP002059_2 376 ----------HEFVQDAHDLSIHLLGILNDILDFAKIEAG 405

CP002059_3328: domain 1 of 1, from 337 to 406: score 82.0, E = 6.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHELRTPL+a++g+++lL++++ + +++
CP002059_3 337 AKSQFLANVSHELRTPLNAVIGLSQLLKDDA------VDIGASPD-- 375

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ leti +++++ll+Lind+Ld s+ieag
CP002059_3 376 ---------FITDLETINSAGRHLLELINDILDVSKIEAG 406

CP002059_0390: domain 1 of 1, from 411 to 479: score 79.6, E = 2.8e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+sefla++sHEL TPLt ++g++++Ll + +els q
CP002059_0 411 LRSEFLATISHELLTPLTYVIGMSSTLLLW------PLGELSKRQ-- 449

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+ti++++e+ll++ind+Ldls+ eag
CP002059_0 450 ----------RDYLQTIHDSGEHLLEMINDILDLSQVEAG 479

CP002059_3500: domain 1 of 1, from 405 to 473: score 78.5, E = 6e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla +sHEL+TPLta++g++ lL + ++ +el+e q
CP002059_3 405 LKDEFLACISHELKTPLTAVLGLSRLLVD------QQLGELNERQ-- 443

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y + i++++++l + ind+Ldl+r+e+g
CP002059_3 444 ----------ARYASLIHQSGRHLMSVINDILDLTRMETG 473

CP002059_2120: domain 1 of 1, from 625 to 691: score 77.5, E = 1.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla lsHELRTPL+ I+g ++lL++ ++l+ +++
CP002059_2 625 VKDEFLAILSHELRTPLNPILGWSQLLKT---------GKLDKDKT- 661

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l++i+r a+ +Li+dlLd sri g
CP002059_2 662 ----------DEALKSIERNAKLQVDLIDDLLDVSRILRG 691

CP002059_1649: domain 1 of 1, from 1020 to 1086: score 70.6, E = 1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efl+ lsHELR+PL+ ++g ++lL++ + l+e ++
CP002059_1 1020 AKDEFLSVLSHELRNPLNCLLGWTQLLRK---------QQLDEAKT- 1056

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++le i+r+a+ +Li dlLd+sri g
CP002059_1 1057 ----------NQALEAIERSAKAQHQLIGDLLDISRISVG 1086

CP002059_2242: domain 1 of 1, from 384 to 451: score 67.2, E = 9.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fla+ sHELR+PL+ I+ + l +++l +++ ee
CP002059_2 384 VKSQFLATTSHELRNPLNIIINCVRLVRDGLC------DDREEEL-- 422

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+++++ a +ll +indlLd+s+ieag
CP002059_2 423 -----------EFLQRADETAIHLLGIINDLLDISKIEAG 451

CP002059_0208: domain 2 of 2, from 653 to 722: score 66.3, E = 1.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f++++sHE+RTPL++ +++a+lL++ +++ e + +
CP002059_0 653 MKIRFFSMASHEFRTPLSTALAAAQLLEN-----SPHAWENGGKR-- 692

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+++++ + +L++d+L++ r+e+g
CP002059_0 693 ----------SRNLRRIQDSVKNMVQLLDDILTINRAETG 722

CP002059_0431: domain 1 of 1, from 203 to 273: score 63.7, E = 9.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELR P++ I+++++++l++ld e s+ +
CP002059_0 203 RLKQFTADASHELRSPIALIQTNVQVALADLD------LETSSVAH- 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y++ l+ ++r ++rl +L+ndlL l+r +++
CP002059_0 243 ---------YQQQLKLVERLTKRLGKLVNDLLFLARQDSE 273

CP002059_1629: domain 1 of 1, from 538 to 602: score 63.3, E = 1.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef+ n+sHE+RTP+t I+g +e + + + ls q
CP002059_1 538 QKTEFFQNISHEFRTPITLIQGPLESVVAIG-------EGLSHGQ-- 575

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++lr ++rllrL+n+lLdl r++ag
CP002059_1 576 -------------SEIALRNSRRLLRLVNQLLDLQRLDAG 602

CP002059_1939: domain 1 of 1, from 190 to 254: score 61.7, E = 3.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++l+HELRTPLt+Ir+ ae+L++ l ++
CP002059_1 190 QRDRSFSDLAHELRTPLTSIRLVAETLQT----------RLEPPL-- 224

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++++ +e++rl +L++ L+l+ ie++
CP002059_1 225 ----------DRWVNRLMQEVDRLINLVQSWLELTEIETN 254

CP002059_1550: domain 1 of 1, from 256 to 322: score 60.7, E = 6.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ s+f +++HEL+TPL+ ++g +el+l + ++ q+
CP002059_1 256 QASRFSGDAAHELKTPLAILQGELELALQ---------KAEPASQL- 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ +++e++rl+++++ lL ls ++ag
CP002059_1 293 ----------QQSLSNLINEVRRLSSIVRKLLLLSLADAG 322

CP002059_2955: domain 1 of 1, from 157 to 225: score 60.7, E = 6.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksef++++sH++R+PLt+I+g+a lL+ + ++l+++++
CP002059_2 157 LKSEFVSMISHDFRNPLTSIQGFAGLLECG--------SKLPSPEI- 194

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +y+++i +++++ll L++++L + ie+g
CP002059_2 195 ---------INRYVSKINNAVDHLLCLLDEILLIGSIESG 225

CP002059_0328: domain 1 of 1, from 912 to 980: score 60.2, E = 9.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+f+++ sHE+RTPL++I+ aelL+ + + ++ee++
CP002059_0 912 LKSRFISMTSHEFRTPLSTILSSAELLEHYH-------QRWTEEKL- 950

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i+ +++r+ ++++d+L + ++eag
CP002059_0 951 ----------LIHLRRIQTAVHRMTEMLDDILVIGKAEAG 980

CP002059_2021: domain 1 of 1, from 428 to 495: score 58.4, E = 2.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s ++a HELRTPL++I+ +e L + +++++ e +
CP002059_2 428 TRSNLIAITGHELRTPLSTIQVCLESLAT--------EPDMPWELQ- 465

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+t+l+++er+++L++d+L+ls +e+g
CP002059_2 466 ----------QVMLSTALSDSERMRKLVQDFLTLSNLESG 495

CP002059_1204: domain 1 of 1, from 271 to 339: score 58.3, E = 3.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
s f++++sHE+R+PL+ I++++el++ ++ +l+e ++
CP002059_1 271 LNSLFISTVSHEFRNPLAMIQTAVELIEIQG-------KNLTETKK- 309

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ +i+++++++++L +d+L + ++ea
CP002059_1 310 ----------NTYFTRIYDAVQSMEKLMEDVLFMGKAEAD 339

CP002059_3425: domain 1 of 1, from 69 to 136: score 53.5, E = 7.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k fla HELR PL++++g+ +l+l++l e ++e+
CP002059_3 69 FKAGFLARTTHELRSPLNGLIGLHQLILNDL-------CEDPAEE-- 106

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++ +++ + ll++i+++L +r ++g
CP002059_3 107 ----------REFVAQAYERSLKLLKMIDEILSVARTDQG 136

CP002059_0578: domain 1 of 1, from 231 to 293: score 53.4, E = 7.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k e+l l ELRTPLt+++g+a +L +e + ++l+ +q
CP002059_0 231 IKLELLGQLTQELRTPLTSVLGMAGVLGREIY------GPLTTKQ-- 269

peLRledpeyreyletilreaerllrLindlLdl<-*
reyle+i++++++ll+L+n++ +l
CP002059_0 270 ----------REYLEIIQHSGRYLLSLVNEITEL 293

CP002059_0174: domain 1 of 1, from 1049 to 1116: score 50.5, E = 5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++ +++H+L++ Lt I+g+a+lL+ ++ +++ee +
CP002059_0 1049 SIGTLAGGIAHDLNNILTPILGAAQLLKGRF--------AKDEERH- 1086

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +i++ a+r +L+ ++L ++r g
CP002059_0 1087 ----------PQLLAIIENNAQRGAALVKQVLSFARGLKG 1116

CP002059_2666: domain 1 of 1, from 304 to 372: score 49.1, E = 1.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++a + H++RTPL++I++ +lL++ + ++++ee++
CP002059_2 304 LRAHLVAIVCHQFRTPLNVISFSNSLLKR-------HIDKWDEEKI- 342

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i+ +e+++++++d+L l+++e+
CP002059_2 343 ----------LPFIKHIQIGVEQINQILDDILFLAKAESV 372

CP002059_0425: domain 1 of 1, from 162 to 237: score 44.9, E = 2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
k++ +++l+H+LR+PLta ++e+L+ +++ v+ ++ + l + +
CP002059_0 162 FKDRVMSMLAHDLRNPLTATAIAIETLQSNYN-VeVGEFQRLKPAMT 207

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ ++++++ ++r+i dlL+ r
CP002059_0 208 -----------AQLLKQARNQTRIIDRMIADLLQVGRGHDT 237

CP002059_0678: domain 1 of 1, from 438 to 504: score 43.0, E = 6.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++n+s LR PLt +r+ + L+ + ++e +
CP002059_0 438 LKDEFVSNISDRLRYPLTNMRMSIRNLRL---------PGITPERQ- 474

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+++++e +LindlL+l ++e+
CP002059_0 475 ----------TRYLDILESECTKEINLINDLLTLQKLETH 504

CP002059_1933: domain 1 of 1, from 188 to 254: score 42.3, E = 1.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l nl H++R+PLtaIr++ +lL + ++++q+
CP002059_1 188 EQRDLLDNLLHQFRNPLTAIRTFGKLLFK---------RLRPADQN- 224

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +i re++rl++L++++ + + +
CP002059_1 225 ----------RDVATSIVRESDRLQELLQQFDQVIDLTSS 254

CP002059_0664: domain 1 of 1, from 141 to 209: score 40.6, E = 3.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f++ l H+LRTPL a ++ l + e + + s+e
CP002059_0 141 QREDFVSRLTHDLRTPLVAADRMLALFQQETF------CKISPEM-- 179

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +++r+ + l +++n lL+ r eag
CP002059_0 180 ----------KQAIAVMIRSNQNLMQMVNTLLEVYRFEAG 209

CP002059_2952: domain 1 of 1, from 19 to 81: score 37.2, E = 2.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++sHELRTPLt+I+ ++++L ++ ++ls ++
CP002059_2 19 LSDQIGGDISHELRTPLTVIQVALDILSS------GKLGNLSQQE-- 57

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++++ + ++rl rL n + e +
CP002059_2 58 ----------LRMVDIATNNVDRLMRLTNAI------EGE 81


Histogram of all scores:
score obs exp (one = represents 11 sequences)
----- --- ---
-15 6 0|=
-14 54 0|=====
-13 154 2|*=============
-12 291 82|=======*===================
-11 450 425|======================================*==
-10 620 789|========================================================= *
-9 585 815|====================================================== *
-8 473 610|=========================================== *
-7 360 384|================================= *
-6 219 221|====================*
-5 133 121|==========*==
-4 78 64|=====*==
-3 37 34|===*
-2 44 18|=*==
-1 22 9|*=
0 11 4|*
1 9 2|*
2 0 1|*
3 1 0|=
4 2 0|=
> 5 40 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 725.7325
P(chi-square) = 0

Total sequences searched: 3589

Whole sequence top hits:
tophits_s report:
Total hits: 35
Satisfying E cutoff: 35
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 33K


Acknowledgements:

This research is funded by:

Developed by: