Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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132 projects found  

1 accessions found for Bradyrhizobium sp. ORS278  

Data for CU234118  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CU234118.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CU234118_5028 CDS_5536524-5532565 117.7 8.8e-33 2
CU234118_3835 CDS_4246044-4243729 96.0 1.2e-26 1
CU234118_1732 CDS_1959112-1961475 94.6 3e-26 1
CU234118_4446 CDS_4880917-4878722 92.3 1.3e-25 1
CU234118_0211 CDS_232469-230205 92.3 1.3e-25 1
CU234118_6623 CDS_7311213-7313765 91.7 2e-25 1
CU234118_4697 CDS_5160446-5162770 89.5 8.6e-25 1
CU234118_2548 CDS_2905872-2907704 87.2 3.7e-24 1
CU234118_4496 CDS_4934146-4935744 83.7 3.6e-23 1
CU234118_6405 CDS_7040986-7039679 79.7 5.1e-22 1
CU234118_6516 CDS_7166501-7169875 76.7 3.6e-21 1
CU234118_3730 CDS_4121123-4127476 76.6 3.9e-21 1
CU234118_0077 CDS_89215-91722 68.9 5.7e-19 1
CU234118_0690 CDS_777800-776001 67.1 1.9e-18 2
CU234118_5518 CDS_6045965-6043248 66.9 2.1e-18 1
CU234118_5447 CDS_5950867-5947172 64.7 9.1e-18 1
CU234118_1166 CDS_1314032-1310577 63.9 1.5e-17 1
CU234118_0226 CDS_251919-254069 62.0 5.4e-17 2
CU234118_3070 CDS_3451915-3449333 59.2 3.3e-16 1
CU234118_6304 CDS_6933801-6937322 57.8 8e-16 1
CU234118_3069 CDS_3449250-3447763 54.9 5.3e-15 1
CU234118_6282 CDS_6907611-6906007 51.9 3.8e-14 1
CU234118_3740 CDS_4137147-4138745 51.3 5.7e-14 1
CU234118_3658 CDS_4043574-4042399 51.0 6.6e-14 1
CU234118_5722 CDS_6266429-6267832 47.8 5.7e-13 1
CU234118_2582 CDS_2948673-2950133 46.6 1.2e-12 1
CU234118_3648 CDS_4032253-4029908 46.2 1.6e-12 1
CU234118_3216 CDS_3592786-3590690 45.7 2.2e-12 1
CU234118_5378 CDS_5882314-5880929 44.8 3.9e-12 1
CU234118_2682 CDS_3049533-3046765 43.1 1.2e-11 1
CU234118_1971 CDS_2222223-2223920 42.3 2e-11 1
CU234118_5450 CDS_5955175-5956647 41.5 3.3e-11 1
CU234118_1327 CDS_1507816-1506410 41.5 3.4e-11 1
CU234118_5400 CDS_5906778-5908181 41.1 4.5e-11 1
CU234118_2287 CDS_2596714-2595203 40.2 7.6e-11 1
CU234118_6725 CDS_7427789-7429372 39.5 1.2e-10 1
CU234118_6136 CDS_6745558-6744404 39.4 1.3e-10 1
CU234118_6454 CDS_7091513-7093258 39.3 1.4e-10 1
CU234118_1376 CDS_1562136-1563485 39.1 1.6e-10 1
CU234118_6609 CDS_7294595-7298203 37.7 4.1e-10 1
CU234118_1787 CDS_2015632-2017230 37.2 5.4e-10 1
CU234118_4483 CDS_4915619-4914282 37.1 5.9e-10 1
CU234118_3286 CDS_3658909-3656660 36.6 8.2e-10 1
CU234118_3762 CDS_4175932-4174133 35.8 1.4e-09 1
CU234118_1606 CDS_1817126-1818490 35.0 2.3e-09 1
CU234118_4747 CDS_5213919-5211388 34.1 4.1e-09 1
CU234118_0482 CDS_523380-522019 33.8 5.2e-09 1
CU234118_6619 CDS_7308554-7307790 30.8 3.6e-08 1
CU234118_3287 CDS_3661467-3659182 30.4 4.7e-08 1
CU234118_2162 CDS_2453787-2455649 29.7 7.5e-08 1
CU234118_5546 CDS_6074934-6072349 28.8 1.4e-07 1
CU234118_3308 CDS_3683028-3681508 27.0 4.3e-07 2

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CU234118_3835 1/1 372 437 .. 1 87 [] 96.0 1.2e-26
CU234118_1732 1/1 399 464 .. 1 87 [] 94.6 3e-26
CU234118_4446 1/1 341 406 .. 1 87 [] 92.3 1.3e-25
CU234118_0211 1/1 233 298 .. 1 87 [] 92.3 1.3e-25
CU234118_6623 1/1 328 393 .. 1 87 [] 91.7 2e-25
CU234118_4697 1/1 537 606 .. 1 87 [] 89.5 8.6e-25
CU234118_2548 1/1 352 421 .. 1 87 [] 87.2 3.7e-24
CU234118_4496 1/1 262 331 .. 1 87 [] 83.7 3.6e-23
CU234118_6405 1/1 200 267 .. 1 87 [] 79.7 5.1e-22
CU234118_6516 1/1 672 738 .. 1 87 [] 76.7 3.6e-21
CU234118_3730 1/1 1441 1509 .. 1 87 [] 76.6 3.9e-21
CU234118_0077 1/1 603 671 .. 1 87 [] 68.9 5.7e-19
CU234118_5518 1/1 672 740 .. 1 87 [] 66.9 2.1e-18
CU234118_0690 2/2 363 428 .. 1 87 [] 66.3 3.1e-18
CU234118_5028 1/2 378 446 .. 1 87 [] 64.8 8.4e-18
CU234118_5447 1/1 357 424 .. 1 87 [] 64.7 9.1e-18
CU234118_1166 1/1 917 986 .. 1 87 [] 63.9 1.5e-17
CU234118_0226 2/2 335 401 .. 1 87 [] 61.2 8.7e-17
CU234118_3070 1/1 488 554 .. 1 87 [] 59.2 3.3e-16
CU234118_6304 1/1 807 872 .. 1 87 [] 57.8 8e-16
CU234118_3069 1/1 282 347 .. 1 87 [] 54.9 5.3e-15
CU234118_5028 2/2 949 1011 .. 1 83 [. 52.9 2e-14
CU234118_6282 1/1 159 226 .. 1 87 [] 51.9 3.8e-14
CU234118_3740 1/1 318 390 .. 1 87 [] 51.3 5.7e-14
CU234118_3658 1/1 139 194 .. 1 78 [. 51.0 6.6e-14
CU234118_5722 1/1 264 322 .. 1 87 [] 47.8 5.7e-13
CU234118_2582 1/1 237 303 .. 1 87 [] 46.6 1.2e-12
CU234118_3648 1/1 507 578 .. 1 87 [] 46.2 1.6e-12
CU234118_3216 1/1 326 394 .. 1 87 [] 45.7 2.2e-12
CU234118_5378 1/1 243 301 .. 1 87 [] 44.8 3.9e-12
CU234118_2682 1/1 554 620 .. 1 87 [] 43.1 1.2e-11
CU234118_1971 1/1 192 257 .. 1 87 [] 42.3 2e-11
CU234118_5450 1/1 121 187 .. 1 87 [] 41.5 3.3e-11
CU234118_1327 1/1 244 306 .. 1 87 [] 41.5 3.4e-11
CU234118_5400 1/1 253 311 .. 1 87 [] 41.1 4.5e-11
CU234118_2287 1/1 274 345 .. 1 87 [] 40.2 7.6e-11
CU234118_6725 1/1 158 224 .. 1 87 [] 39.5 1.2e-10
CU234118_6136 1/1 1 61 [. 6 87 .] 39.4 1.3e-10
CU234118_6454 1/1 352 421 .. 1 87 [] 39.3 1.4e-10
CU234118_1376 1/1 85 150 .. 1 87 [] 39.1 1.6e-10
CU234118_6609 1/1 831 897 .. 1 87 [] 37.7 4.1e-10
CU234118_1787 1/1 157 228 .. 1 87 [] 37.2 5.4e-10
CU234118_4483 1/1 230 288 .. 1 87 [] 37.1 5.9e-10
CU234118_3286 1/1 378 444 .. 1 87 [] 36.6 8.2e-10
CU234118_3762 1/1 225 291 .. 1 87 [] 35.8 1.4e-09
CU234118_1606 1/1 210 305 .. 1 87 [] 35.0 2.3e-09
CU234118_4747 1/1 457 523 .. 1 87 [] 34.1 4.1e-09
CU234118_0482 1/1 218 284 .. 1 87 [] 33.8 5.2e-09
CU234118_6619 1/1 41 107 .. 1 87 [] 30.8 3.6e-08
CU234118_3287 1/1 378 444 .. 1 87 [] 30.4 4.7e-08
CU234118_2162 1/1 401 459 .. 1 87 [] 29.7 7.5e-08
CU234118_5546 1/1 488 555 .. 1 87 [] 28.8 1.4e-07

Alignments of top-scoring domains:
CU234118_3835: domain 1 of 1, from 372 to 437: score 96.0, E = 1.2e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTP+++++g+a++Lle t+l++eq
CU234118_3 372 AKSDFLAMMSHEIRTPMNGVLGLASTLLE---------TKLDDEQ-- 407

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++ ti+++++ l+r++nd+Ldls++ ag
CU234118_3 408 ----------RHAVMTIRESGDNLQRILNDILDLSKLNAG 437

CU234118_1732: domain 1 of 1, from 399 to 464: score 94.6, E = 3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHE+RTPL+++ g+++lL+ t l++eq
CU234118_1 399 AKSDFLAIMSHEIRTPLSGMVGMVDLLRG---------TSLNDEQ-- 434

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++ ++++a+ ll+ ind+Ld+s++eag
CU234118_1 435 ----------KRYTSLAKESADLLLQVINDILDFSKLEAG 464

CU234118_4446: domain 1 of 1, from 341 to 406: score 92.3, E = 1.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+sefla++sHE+RTP+++++g+a+lLl ++l +eq
CU234118_4 341 ARSEFLAMMSHEIRTPMNGVIGLADLLLS---------ADLAPEQ-- 376

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ t++++a++ll+L+nd+Ld+s+++a
CU234118_4 377 ----------RKIATTLRESADYLLQLLNDVLDFSKLDAD 406

CU234118_0211: domain 1 of 1, from 233 to 298: score 92.3, E = 1.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL++I+g+ lLle t+l++eq
CU234118_0 233 AKSRFLAMASHEIRTPLNGILGMGGLLLE---------TPLTPEQ-- 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y + ++ ++e l +Lin+lLd+s+ieag
CU234118_0 269 ----------TTYAKAVRASGEALMSLINELLDYSKIEAG 298

CU234118_6623: domain 1 of 1, from 328 to 393: score 91.7, E = 2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a++sHE+RTP++a++g+a +Lle t+l++eq
CU234118_6 328 AKSTFVAMMSHEIRTPMNAVLGLATTLLE---------TNLDPEQ-- 363

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ + i+++++ ll+++nd+Ld+s++e+g
CU234118_6 364 ----------RRSVVAIHNAGDNLLEILNDILDFSKLESG 393

CU234118_4697: domain 1 of 1, from 537 to 606: score 89.5, E = 8.6e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHELRTPL+aI+g++e++ +++ + l++e+
CU234118_4 537 TKSKFLANMSHELRTPLNAIIGFSEIMGSGMF------GSLGSEK-- 575

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ey + il ++++ll+ ind+Ld+s+ieag
CU234118_4 576 ---------YQEYCHDILTSGQYLLEVINDILDMSKIEAG 606

CU234118_2548: domain 1 of 1, from 352 to 421: score 87.2, E = 3.7e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla++sHELRTPL+aI+g++e+L + l++ r
CU234118_2 352 AKTRFLATMSHELRTPLNAIIGFSEMLMQ------EQVLVLNAARR- 391

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey + i +++++ll+ +n +Ld+s++e+g
CU234118_2 392 ----------REYAQLINDSGQHLLSVVNGILDMSKMESG 421

CU234118_4496: domain 1 of 1, from 262 to 331: score 83.7, E = 3.6e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHELRTPL+aI+g++e+++ + ++
CU234118_4 262 AKSRFLAQMSHELRTPLNAILGFSEVMKS---------EIFGAHA-- 297

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+p y+ey i++++ +ll+Lin++Ldlsrieag
CU234118_4 298 ------VPVYKEYSADIHNSGVHLLNLINEILDLSRIEAG 331

CU234118_6405: domain 1 of 1, from 200 to 267: score 79.7, E = 5.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPL+a++g++++L+ ++ +++ r
CU234118_6 200 MRADFVANASHELRTPLAALSGFIDTLQG--------PAKDDPKAR- 237

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +++ +a r+ rLi+dlL lsr e
CU234118_6 238 ----------ERFLGIMHTQATRMARLIDDLLSLSRVELS 267

CU234118_6516: domain 1 of 1, from 672 to 738: score 76.7, E = 3.6e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ + +lsHELR PL+aI+gya+lL+ dt l ++
CU234118_6 672 AKSRYVVGLSHELRSPLNAISGYAQLLEQ--------DTSLAPKP-- 708

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +++++r+a++l+ Li+ +Ld+s+ieag
CU234118_6 709 ----------RDQVRVVRRSADHLSGLIDGILDISKIEAG 738

CU234118_3730: domain 1 of 1, from 1441 to 1509: score 76.6, E = 3.9e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++I+ + + L e d++l+ +q
CU234118_3 1441 YKSEFLANMSHELRTPLNSILILGQQLTE------NPDGNLTVKQ-- 1479

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ +ti+ ++ ll+Li+d+Ldls+ie+g
CU234118_3 1480 ----------VEFARTIHGAGTDLLNLISDILDLSKIESG 1509

CU234118_0077: domain 1 of 1, from 603 to 671: score 68.9, E = 5.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ ++s ELR PLt+I+g+a+ L + ++ ++l+++q
CU234118_0 603 MKIDFVHHVSYELRAPLTTIIGFAHFLSD------PSTGPLTPKQ-- 641

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl+ + ++++ ll+L n++Ldl+ i+ag
CU234118_0 642 ----------AEYLDYVTKSTNALLALTNNILDLATIDAG 671

CU234118_5518: domain 1 of 1, from 672 to 740: score 66.9, E = 2.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +l ++sH+L+TPL++++g+a+++++ + t ls++++
CU234118_5 672 LRSALLTSISHDLKTPLASVLGAASTMRDLA-------TRLSDKEK- 710

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l t+++e+erl+r i +lLd++++e+g
CU234118_5 711 ----------LDLLATVIDESERLNRFIANLLDMTKLESG 740

CU234118_0690: domain 2 of 2, from 363 to 428: score 66.3, E = 3.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a+++HEL++PLt++r ++e+L ++++ r
CU234118_0 363 AIEMFAADVAHELKNPLTSLRSAVETLPL----------ARNDNSR- 398

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +i+++++rl+rLi+d+ d sr++a+
CU234118_0 399 ----------ARLLAVIEHDVKRLDRLISDISDASRLDAE 428

CU234118_5028: domain 1 of 2, from 378 to 446: score 64.8, E = 8.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f++n+sHE+RTPLt ++ +e Ll+ +++ +e+
CU234118_5 378 AKTTFFSNISHEFRTPLTLMLSPLEDLLA------RDEGTIAAED-- 416

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l i+r + rl +L+n lLd+srieag
CU234118_5 417 ----------RSVLTLIHRNSLRLMKLVNTLLDFSRIEAG 446

CU234118_5447: domain 1 of 1, from 357 to 424: score 64.7, E = 9.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+an+sHE+RTPLt ++g +e l + + ls+ +
CU234118_5 357 AKTAFFANVSHEFRTPLTLMLGPLEDVLS-------QPQVLSAAD-- 394

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le+++r a rll+L+n lLd srieag
CU234118_5 395 ----------HDRLEIAQRNALRLLKLVNTLLDVSRIEAG 424

CU234118_1166: domain 1 of 1, from 917 to 986: score 63.9, E = 1.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak ++la +s E R PL+aI+g+ae++ + ++l+
CU234118_1 917 AKADMLARISQEVRAPLNAIIGFAEVMIG------ERFGTLGNAR-- 955

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ey + i+ ++er +Li+dlL+lsrie+g
CU234118_1 956 ---------YAEYMKDIRASGERVVSLIDDLLELSRIETG 986

CU234118_0226: domain 2 of 2, from 335 to 401: score 61.2, E = 8.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++H++++ Lt+Ir+ a+lL++ ++l++e r
CU234118_0 335 ALGQLTGGVAHDFNNLLTVIRASADLLRR---------PNLPDERR- 371

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++ i + + r ++L ++lL ++r ++
CU234118_0 372 ----------QRYIDAISDTVARASKLTSQLLAFARRQTL 401

CU234118_3070: domain 1 of 1, from 488 to 554: score 59.2, E = 3.3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt Ir +++ L++ +l+ee r
CU234118_3 488 AVGQLTGGVAHDFNNLLTIIRSATDFLRR---------RDLPEERR- 524

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ i + +er ++L +lL ++r +
CU234118_3 525 ----------RRYVDAISETVERASKLTGQLLAFARRQPL 554

CU234118_6304: domain 1 of 1, from 807 to 872: score 57.8, E = 8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH++ +PL+a r+y+ L e +++++ee
CU234118_6 807 SKTRFLAAASHDILQPLNAARLYVTSLVE--------RQTAGEES-- 843

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e i++++e +++++ lLd+sr++ag
CU234118_6 844 -----------RLVENIDDSLEAIEEILGALLDISRLDAG 872

CU234118_3069: domain 1 of 1, from 282 to 347: score 54.9, E = 5.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ anl+HE+R+P++a+r+ ae +l+ ++ + +
CU234118_3 282 AVGRLSANLAHEIRNPIAAMRLKAENALA---------SPDPTRK-- 317

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++le il+++ rl++L++dlL ++++ +
CU234118_3 318 ----------GRALEAILQQVARLDALLRDLLAMTQASRP 347

CU234118_5028: domain 2 of 2, from 949 to 1011: score 52.9, E = 2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+Ir a+lL++ ls+e +
CU234118_5 949 AIGQLTGGVAHDFNNLLTVIRSSADLLRR---------RQLSPERM- 985

peLRledpeyreyletilreaerllrLindlLdlsr<-*
r+y++ i + a+r +L +lL ++r
CU234118_5 986 ----------RRYVDAISDTADRAAKLTGQLLAFAR 1011

CU234118_6282: domain 1 of 1, from 159 to 226: score 51.9, E = 3.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L +I+gy+e+L+ + +el + +
CU234118_6 159 AIGQLTGGIAHDFNNILQVIIGYTETLQGAV-------SELAPRH-- 196

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++++ i+ +a+r L ++lL ++r +
CU234118_6 197 ----------RRAVDNIRTAANRAATLTQQLLSFARKQRL 226

CU234118_3740: domain 1 of 1, from 318 to 390: score 51.3, E = 5.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f a+l HEL+ PLt+I+g+aelL + l a ++ l+ ++
CU234118_3 318 YVRNFSAHLTHELKSPLTSIKGAAELLMDSL---HATSGQLTRAEQ- 360

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l il +a+rl+r+ ++l++l+r+ea
CU234118_3 361 ----------ERFLGNILGDADRLERMAQRLRELARAEAL 390

CU234118_3658: domain 1 of 1, from 139 to 194: score 51.0, E = 6.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++a+l+HE+++PL++Irg+a+lL+ +s+e+
CU234118_3 139 SVIALAAMLAHEIKNPLSGIRGAAQLLEQ----------QASSED-- 173

peLRledpeyreyletilreaerllrLindl<-*
r +++ i +ea+r+ L++++
CU234118_3 174 ----------RMLTRLICDEADRIVTLVDRM 194

CU234118_5722: domain 1 of 1, from 264 to 322: score 47.8, E = 5.7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRT Lt ++ + lL + +++
CU234118_5 264 QRTAMLAGVSHDLRTILTRFKLELALLGD-------------SPE-- 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++++++ ++++++d L ++r ++g
CU234118_5 296 -------------IDAMRKDVDEMSHMLEDYLAFARGDNG 322

CU234118_2582: domain 1 of 1, from 237 to 303: score 46.6, E = 1.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e n++H+L+TPLt +r ae +l+ +se++
CU234118_2 237 GLKEVSDNIAHDLKTPLTRLRNRAEEALA---------KSRSEDE-- 272

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr +le+ ++e++ l r n lL ++r+e+g
CU234118_2 273 ---------YRAALERTIEESDGLIRTFNALLMIARAESG 303

CU234118_3648: domain 1 of 1, from 507 to 578: score 46.2, E = 1.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ ++ ++HE+++PLt I++ ae +++++ +e+++
CU234118_3 507 AWGDVARRIAHEIKNPLTPIQLSAERIRRKFG------KVITEDKAV 547

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +eti r+++ ++r+++++ ++r+ +
CU234118_3 548 ---------FEQCTETIVRQVDDIRRMVDEFSRFARMPKP 578

CU234118_3216: domain 1 of 1, from 326 to 394: score 45.7, E = 2.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g +e+L++++ + + ++ +
CU234118_3 326 AVGQLTGGIAHDFNNLLTGIMGSLEMLQTRM-----RQGRFTDVD-- 365

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y+ ++ +++r +L +lL +sr ++
CU234118_3 366 -----------RYVAAAQGASKRAAALTHRLLAFSRRQTL 394

CU234118_5378: domain 1 of 1, from 243 to 301: score 44.8, E = 3.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++la++sH+LRTPLt +r+ +e +
CU234118_5 243 DRTRMLAAISHDLRTPLTRLRLRSERIGQ------------------ 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +lr++++ +r++++ Ld+ r ++
CU234118_5 272 ----------GDMRSAMLRDIDQVSRMLDETLDYLRDDTK 301

CU234118_2682: domain 1 of 1, from 554 to 620: score 43.1, E = 1.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g + +L + + ++ +++
CU234118_2 554 AVGQLTGGIAHDFNNILTVITGSIAILAD---------AVADRPEL- 590

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + i+++a+r +L ++lL ++r +
CU234118_2 591 ----------AAIAKLIDDSADRGAHLTRQLLAFARKQPL 620

CU234118_1971: domain 1 of 1, from 192 to 257: score 42.3, E = 2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L +I+g +++L + ++ ++
CU234118_1 192 AIGRLTGGVAHDFNNLLMVISGGLDMLDR---------QADPARR-- 227

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ + ++++a+r +L ++lL +sr ++
CU234118_1 228 ----------RRLMDGMIQAAQRGASLTRQLLAFSRRQEL 257

CU234118_5450: domain 1 of 1, from 121 to 187: score 41.5, E = 3.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g++e+L + + ++ +q+
CU234118_5 121 AIGQLTGGVAHDFNNILTVITGTIEILAD---------AVKDKPQL- 157

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i +aer +L + lL +sr +
CU234118_5 158 ----------AGIAAMISAAAERGADLTRHLLAFSRRQPL 187

CU234118_1327: domain 1 of 1, from 244 to 306: score 41.5, E = 3.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++ H+LRTPL+aI + +elL ++ ++++
CU234118_1 244 LMQRFIADATHQLRTPLAAIDAEVELLSG---------QTSDPKT-- 279

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++++ + l rL ++lLd + i++
CU234118_1 280 -------------LDRLRGRISDLARLASQLLDHAMIQHR 306

CU234118_5400: domain 1 of 1, from 253 to 311: score 41.1, E = 4.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++la++sH+LRTPLt +r+ +e ++
CU234118_5 253 DRTKMLAAISHDLRTPLTRMRLRCEFVED------------------ 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++l +++++ +++ +L + r +
CU234118_5 282 ----------ELQRSRMLADLDQMHAMLGSVLSFLRNGRK 311

CU234118_2287: domain 1 of 1, from 274 to 345: score 40.2, E = 7.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PL+aI+ y + ++ +lag+++ + ++
CU234118_2 274 AMGEMASALAHELNQPLAAISNYMKGSRR----LLAGSSDPNTGKI- 315

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +++ ++a r ++i++l+d+ ++
CU234118_2 316 ----------ESAMDRAAEQAIRAGQIIRRLRDFVSRGES 345

CU234118_6725: domain 1 of 1, from 158 to 224: score 39.5, E = 1.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g++e+L e + ++ +q+
CU234118_6 158 AIGQLTGGVAHDFNNILTVITGTIEILAE---------AVKDRPQL- 194

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ i ++a r +L lL ++r +
CU234118_6 195 ----------VQITSLINSAAARGADLTKHLLAFARRQPL 224

CU234118_6136: domain 1 of 1, from 1 to 61: score 39.4, E = 1.3e-10
*->lanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLRl
+a +HE RTPLt+I++ ++lL + +el+e +
CU234118_6 1 MAVFAHEVRTPLTGILAISDLLAT---------SELGERE------- 31

edpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ti+ ae+l++L + d ++ e+
CU234118_6 32 -----RRWVDTIKAGAEHLSSLATLFVDAAKHEST 61

CU234118_6454: domain 1 of 1, from 352 to 421: score 39.3, E = 1.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+e l +++H+L++PL +I+g +e+L e + t +s++ +
CU234118_6 352 FKNEILGTVAHDLKNPLGVILGRTEMLTELVA------TGASADGI- 391

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i+++a+rl ++++ l + ++a
CU234118_6 392 ----------ASQIGHIRDAAKRLTSMVDHLISDAMADAF 421

CU234118_1376: domain 1 of 1, from 85 to 150: score 39.1, E = 1.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks l ++ H+L +PL+a r+++++L + + +se
CU234118_1 85 LKSSVLISVTHDLLQPLNAARLTLSTLAD---------EVQSERG-- 120

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l ++r++ l++L++ lLd+++++ag
CU234118_1 121 ----------ASMLGQVDRSLSMLEDLLRSLLDIAKLDAG 150

CU234118_6609: domain 1 of 1, from 831 to 897: score 37.7, E = 4.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g++e+L + + + e+q+
CU234118_6 831 AIGQLTGGIAHDFNNILTVITGTIEILAA---------AVAKEPQL- 867

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ i+++a r +L + lL ++r +
CU234118_6 868 ----------AAITRMIDEAAARGADLTQHLLAFARRQPL 897

CU234118_1787: domain 1 of 1, from 157 to 228: score 37.2, E = 5.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt I+g++e++++ + + e ++
CU234118_1 157 AVGQLTGGVAHDFNNLLTIISGNLEIAER--------SLRAQGEAAR 195

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++L +++ + + a+r L ++lL ++r +
CU234118_1 196 DRL-------TRAIAQAASGAQRAATLTQRLLAFARRQPL 228

CU234118_4483: domain 1 of 1, from 230 to 288: score 37.1, E = 5.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a+++H+LRTPL+++r+ +e+ +s+
CU234118_4 230 MQRQFTADAAHQLRTPLAVLRTRIET------------KGQSAGR-- 262

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l ++ r++r++ +lL+++ +++
CU234118_4 263 --------------AELLADIARMSRIVHQLLEIAELDTL 288

CU234118_3286: domain 1 of 1, from 378 to 444: score 36.6, E = 8.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt I g +e+L + t ++ + +
CU234118_3 378 AIGKLTGGVAHDFNNMLTIITGSIEMLVD---------TVRDRPAA- 414

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ i r+++r+ +Li+ lL ++r +
CU234118_3 415 ----------AELAVLISRATDRCTELIRHLLAFARKQPL 444

CU234118_3762: domain 1 of 1, from 225 to 291: score 35.8, E = 1.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L +++ yae++++ ++++++ r
CU234118_3 225 AVGVLAGGIAHDFNNLLLVMMIYAEMIRD---------EAATDDPR- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i+r+++r ++L ++lL +sr +
CU234118_3 262 ----------LSDVLEIIRAVDRGRALTQQLLAFSRKQPL 291

CU234118_1606: domain 1 of 1, from 210 to 305: score 35.0, E = 2.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldk......v.lagdte
++++++a+++HEL++P++ + g++++L + +++ + +++ ++++
CU234118_1 210 SLGRLVAGVAHELNNPISFVYGNVHTLMR--YRtalvgyLeAVHEQP 254

lseeqrlpeLR.l.....edpeyreyletilreaerllrLindlLdlsri
s+e + +LR++ + + + + ++e l+ a r+++++ +l+ ls
CU234118_1 255 VSDEVA--ALRkElridaIVEDFGPLIEGTLEGAVRISEIVKNLRRLSFS 302

eag<-*
g
CU234118_1 303 KLG 305

CU234118_4747: domain 1 of 1, from 457 to 523: score 34.1, E = 4.1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ L+aI+++ + Ll+ ++ +++
CU234118_4 457 MVGQLAGGIAHDFNNVLSAIMMANDFLLN--------AHKPTDPS-- 493

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i++ a r L+++lL +sr ++
CU234118_4 494 ----------FQDIMQIKQNATRAATLVRQLLAFSRRQTL 523

CU234118_0482: domain 1 of 1, from 218 to 284: score 33.8, E = 5.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+++HEL TPL++I + + L++ +l + +
CU234118_0 218 QLDGLAAAAAHELGTPLATIVLISRELER----------ALQDNSH- 253

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++t++++a+r+++++ + +ls ++
CU234118_0 254 ---------VTSDIKTLREQAQRCRDILGKITQLSSVGSM 284

CU234118_6619: domain 1 of 1, from 41 to 107: score 30.8, E = 3.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +l H++++ Lt+I g++++L e + + +++
CU234118_6 41 IVGQVAGGLLHDFNNILTVITGTIDILAE---------AVEDRPEL- 77

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i+++a r rL ++lL ++r + +
CU234118_6 78 ----------AAVARLIDEAATRGARLTSQLLSFARGRPP 107

CU234118_3287: domain 1 of 1, from 378 to 444: score 30.4, E = 4.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt I g++e+L + + ++ + +
CU234118_3 378 AIGKLTGGVAHDFNNMLTIITGTIETLAD---------EVRDRPAA- 414

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i ++a+r+ +Li+ lL ++r +
CU234118_3 415 ----------AATAALIGQAADRCTELIRHLLAFARKQPL 444

CU234118_2162: domain 1 of 1, from 401 to 459: score 29.7, E = 7.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ a+l HE+++PL+a++++++ + ++d
CU234118_2 401 VLGQMSAGLVHEINQPLAALQTASDNAVQFVD--------------- 432

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++ ++ + r+ +L+++l +r+ +
CU234118_2 433 ----------RGMVSEARGNLLRIGELVRRL---ARLTGQ 459

CU234118_5546: domain 1 of 1, from 488 to 555: score 28.8, E = 1.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H+ ++ L+a +g+++lLl+ +l++ +++
CU234118_5 488 AIGQLAGGIAHDSNNMLAATLGNLDLLLD----------TLPPGEAA 524

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + e+++++aer +L ++lL ++r ++
CU234118_5 525 S---------RGMAERAIEAAERVADLNRRLLAFARKQTL 555


Histogram of all scores:
score obs exp (one = represents 23 sequences)
----- --- ---
-15 3 0|=
-14 20 0|=
-13 92 5|*===
-12 314 153|======*=======
-11 595 796|========================== *
-10 1078 1477|=============================================== *
-9 1302 1525|========================================================= *
-8 1164 1142|=================================================*=
-7 899 719|===============================*========
-6 537 414|=================*======
-5 282 227|=========*===
-4 163 121|=====*==
-3 103 64|==*==
-2 45 33|=*
-1 24 17|*=
0 13 9|*
1 10 4|*
2 2 2|*
3 5 1|*
4 2 0|=
5 1 0|=
6 2 0|=
7 1 0|=
8 0 0|
9 0 0|
10 1 0|=
11 0 0|
> 12 59 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 1999.4229
P(chi-square) = 0

Total sequences searched: 6752

Whole sequence top hits:
tophits_s report:
Total hits: 52
Satisfying E cutoff: 52
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 52
Satisfying E cutoff: 52
Total memory: 42K


Acknowledgements:

This research is funded by:

Developed by: