Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
106 projects found  

1 accessions found for Streptomyces scabiei 87.22  

Data for FN554889  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: FN554889.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
FN554889_2393 CDS_2851304-2845923 92.3 1.8e-25 1
FN554889_4542 CDS_5291010-5292728 89.3 1.3e-24 1
FN554889_8698 CDS_10029148-10026146 89.2 1.3e-24 1
FN554889_5942 CDS_6811206-6807031 87.2 4.8e-24 1
FN554889_8418 CDS_9725525-9729799 86.6 7.2e-24 1
FN554889_1027 CDS_1223991-1225424 82.9 8.3e-23 1
FN554889_7420 CDS_8484225-8483167 77.9 2.1e-21 1
FN554889_3344 CDS_3926197-3927738 74.4 2.1e-20 1
FN554889_2853 CDS_3389534-3390634 74.3 2.2e-20 1
FN554889_7155 CDS_8185068-8186204 73.7 3.3e-20 1
FN554889_1076 CDS_1277434-1275977 72.9 5.7e-20 1
FN554889_2285 CDS_2718852-2716210 72.6 6.6e-20 1
FN554889_1364 CDS_1615820-1614249 70.2 3.2e-19 1
FN554889_4304 CDS_5012418-5013947 67.8 1.5e-18 1
FN554889_5330 CDS_6154341-6156428 67.2 2.2e-18 1
FN554889_0379 CDS_463198-462086 66.5 3.6e-18 1
FN554889_4011 CDS_4698169-4699557 65.4 7.3e-18 1
FN554889_1359 CDS_1608890-1607355 62.8 4.1e-17 1
FN554889_4822 CDS_5577286-5578551 61.8 7.9e-17 1
FN554889_0089 CDS_95371-94673 59.3 4e-16 1
FN554889_2831 CDS_3366396-3367676 55.0 6.6e-15 1
FN554889_2293 CDS_2724531-2723269 54.9 7e-15 1
FN554889_8627 CDS_9952920-9951421 54.4 9.4e-15 1
FN554889_3795 CDS_4431683-4433089 53.1 2.2e-14 1
FN554889_3731 CDS_4351188-4349542 51.8 5.4e-14 1
FN554889_2364 CDS_2814479-2813064 50.9 9.5e-14 1
FN554889_0255 CDS_293271-292021 49.7 2e-13 1
FN554889_4772 CDS_5532110-5530650 47.6 8.2e-13 1
FN554889_2713 CDS_3245404-3243902 47.1 1.1e-12 1
FN554889_6013 CDS_6892176-6890530 46.5 1.6e-12 1
FN554889_5561 CDS_6417108-6418592 38.2 3.8e-10 1
FN554889_5285 CDS_6094310-6095578 37.1 7.5e-10 1
FN554889_4066 CDS_4761178-4759796 32.7 1.4e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
FN554889_2393 1/1 1328 1396 .. 1 87 [] 92.3 1.8e-25
FN554889_4542 1/1 302 369 .. 1 87 [] 89.3 1.3e-24
FN554889_8698 1/1 331 396 .. 1 87 [] 89.2 1.3e-24
FN554889_5942 1/1 941 1009 .. 1 87 [] 87.2 4.8e-24
FN554889_8418 1/1 863 931 .. 1 87 [] 86.6 7.2e-24
FN554889_1027 1/1 255 322 .. 1 87 [] 82.9 8.3e-23
FN554889_7420 1/1 110 177 .. 1 87 [] 77.9 2.1e-21
FN554889_3344 1/1 268 339 .. 1 87 [] 74.4 2.1e-20
FN554889_2853 1/1 126 190 .. 1 87 [] 74.3 2.2e-20
FN554889_7155 1/1 148 216 .. 1 87 [] 73.7 3.3e-20
FN554889_1076 1/1 254 321 .. 1 87 [] 72.9 5.7e-20
FN554889_2285 1/1 614 682 .. 1 87 [] 72.6 6.6e-20
FN554889_1364 1/1 252 319 .. 1 87 [] 70.2 3.2e-19
FN554889_4304 1/1 288 355 .. 1 87 [] 67.8 1.5e-18
FN554889_5330 1/1 346 413 .. 1 87 [] 67.2 2.2e-18
FN554889_0379 1/1 150 214 .. 1 87 [] 66.5 3.6e-18
FN554889_4011 1/1 238 303 .. 1 87 [] 65.4 7.3e-18
FN554889_1359 1/1 249 316 .. 1 87 [] 62.8 4.1e-17
FN554889_4822 1/1 155 221 .. 1 87 [] 61.8 7.9e-17
FN554889_0089 1/1 4 68 .. 1 87 [] 59.3 4e-16
FN554889_2831 1/1 224 282 .. 1 87 [] 55.0 6.6e-15
FN554889_2293 1/1 200 266 .. 1 87 [] 54.9 7e-15
FN554889_8627 1/1 240 304 .. 1 87 [] 54.4 9.4e-15
FN554889_3795 1/1 241 299 .. 1 87 [] 53.1 2.2e-14
FN554889_3731 1/1 258 325 .. 1 87 [] 51.8 5.4e-14
FN554889_2364 1/1 253 316 .. 1 87 [] 50.9 9.5e-14
FN554889_0255 1/1 206 266 .. 1 87 [] 49.7 2e-13
FN554889_4772 1/1 256 327 .. 1 87 [] 47.6 8.2e-13
FN554889_2713 1/1 267 328 .. 1 87 [] 47.1 1.1e-12
FN554889_6013 1/1 283 347 .. 1 87 [] 46.5 1.6e-12
FN554889_5561 1/1 225 276 .. 1 73 [. 38.2 3.8e-10
FN554889_5285 1/1 202 267 .. 1 87 [] 37.1 7.5e-10
FN554889_4066 1/1 216 290 .. 1 87 [] 32.7 1.4e-08

Alignments of top-scoring domains:
FN554889_2393: domain 1 of 1, from 1328 to 1396: score 92.3, E = 1.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ +a+lL ++++ ++l+++q
FN554889_2 1328 YKSEFLANMSHELRTPLNSLLILAKLLADNAE------SNLTPKQ-- 1366

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ eti+ ++ ll+Lind+Ldls+ eag
FN554889_2 1367 ----------VEFAETIHGAGSDLLQLINDILDLSKVEAG 1396

FN554889_4542: domain 1 of 1, from 302 to 369: score 89.3, E = 1.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a++sHELRTPL++Irgyael ++ g++e ++++
FN554889_4 302 RVRQFVADASHELRTPLASIRGYAELTRR-------GREEIGPDT-- 339

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l +i++e+ r+ L++dlL l+r++ag
FN554889_4 340 ----------RHALGRIESESGRMTMLVEDLLLLARLDAG 369

FN554889_8698: domain 1 of 1, from 331 to 396: score 89.2, E = 1.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla +sHE+RTP+++++g+ lLl+ t ++ eq
FN554889_8 331 AKSEFLAKVSHEIRTPINGVLGMNALLLD---------TRMDGEQ-- 366

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y +t++++a+ llrL++d+Ldls+ eag
FN554889_8 367 ----------RHYASTVQESAQNLLRLLDDFLDLSKVEAG 396

FN554889_5942: domain 1 of 1, from 941 to 1009: score 87.2, E = 4.8e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ +a lL + d++l++++
FN554889_5 941 YKSEFLANMSHELRTPLNSLLILARLLSD------NPDGHLTDQE-- 979

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ti+r++ ll+Lind+Ldls+ieag
FN554889_5 980 ----------VQFATTIHRSGSDLLQLINDILDLSKIEAG 1009

FN554889_8418: domain 1 of 1, from 863 to 931: score 86.6, E = 7.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ +a+lL + +l+++q
FN554889_8 863 YKSEFLANMSHELRTPLNSLLILAQLLAQ------NPSRNLTPKQ-- 901

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey +i++++ ll+Lind+Ldls+ eag
FN554889_8 902 ----------VEYAGIIHSAGSDLLQLINDILDLSKVEAG 931

FN554889_1027: domain 1 of 1, from 255 to 322: score 82.9, E = 8.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+a++sHELRTP++ Irg+ael+l+ + ++l+ e
FN554889_1 255 RLRHFAADASHELRTPVANIRGHAELALR-------HNAPLPTEV-- 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +le+i++e+ r+ rL++dlL l+r++ag
FN554889_1 293 ----------RHALERIDSESLRMTRLVDDLLLLARLDAG 322

FN554889_7420: domain 1 of 1, from 110 to 177: score 77.9, E = 2.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTPL ++rgyael + ++l++ +
FN554889_7 110 RMRQFVADASHELRTPLQSLRGYAELYQS---------GALPDRAA- 146

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e++e++l+e++r+ rL++ lL l+r +++
FN554889_7 147 ---------VNEAVERMLSEIHRMTRLVESLLGLARFDEQ 177

FN554889_3344: domain 1 of 1, from 268 to 339: score 74.4, E = 2.1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++f+a++sHELRTPLtaI + +e+L+eel +++ +
FN554889_3 268 ASRRFVADMSHELRTPLTAITAVTEVLEEEL--------DADTGSL- 305

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
dp+++ +++ + +e++rl+ L+++l++ +r +ag
FN554889_3 306 ------DPMIEPAVRLVVSETQRLNTLVENLMEVTRFDAG 339

FN554889_2853: domain 1 of 1, from 126 to 190: score 74.3, E = 2.2e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ e++an+sHELRTP++++r+ +e + +++ t +++e++
FN554889_2 126 QRKELVANVSHELRTPIAGLRAVLENIVDGV-------TQADPETM- 164

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+t+l+++erl rL++ lLdlsr+++g
FN554889_2 165 --------------RTALKQTERLGRLVETLLDLSRLDNG 190

FN554889_7155: domain 1 of 1, from 148 to 216: score 73.7, E = 3.3e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e++a+++HELR PLt+++g++ +Ll+ +++ +++q+
FN554889_7 148 SHAELIATVAHELRSPLTSVKGFTATLLA-------KWERFTDDQK- 186

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +let++ +a+r rLi +lLd+sri++g
FN554889_7 187 ----------KLMLETVDADANRVTRLIAELLDISRIDSG 216

FN554889_1076: domain 1 of 1, from 254 to 321: score 72.9, E = 5.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTPL ++rgya+l + ++ s+e+r
FN554889_1 254 RLRRFVADASHELRTPLMSVRGYADLFQY--------AAAHSPEER- 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l +++ ea r+ L++dlL l+r++a
FN554889_1 292 ----------DKHLARLRAEAARMGYLLDDLLMLARLDAA 321

FN554889_2285: domain 1 of 1, from 614 to 682: score 72.6, E = 6.6e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +la++sH+LRTPL++I+++++ L+ d ++s+e+
FN554889_2 614 IRTALLAAVSHDLRTPLAGIKAAVSSLRS-------DDVAWSPEDE- 652

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l i++ a+rl++L+ +lLd+sr+++g
FN554889_2 653 ----------AELLAGIEEGADRLDHLVGNLLDMSRLQTG 682

FN554889_1364: domain 1 of 1, from 252 to 319: score 70.2, E = 3.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ fla++ HELRTPLt+++g+aelL ++e+s e r
FN554889_1 252 RLRHFLADVGHELRTPLTSLQGFAELLVQ--------EPEMSLERR- 289

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ + i r a+r++rLi+ l +l+r+++
FN554889_1 290 ----------QEAQQLIVRNADRMSRLIESLSQLARLGEV 319

FN554889_4304: domain 1 of 1, from 288 to 355: score 67.8, E = 1.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+a++ HELR+PLt+I+gyael++ ++ e ++
FN554889_4 288 RLREFMAAAGHELRNPLTTISGYAELARV---------GDPAYEPMR 325

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l +i e+ r++ Li++l l+r++ g
FN554889_4 326 ----------QEALGRIATEVGRMSTLIDELVLLTRLDLG 355

FN554889_5330: domain 1 of 1, from 346 to 413: score 67.2, E = 2.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f++++sHELRTPLt++r++a+++ + + + ++ +
FN554889_5 346 MQRRFVSDVSHELRTPLTTVRMAADVIHD-------ARVDFDPVT-- 383

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ e + ++++r ++L+ dlL++sr +ag
FN554889_5 384 ----------ARSAELLADQLDRFESLLADLLEISRFDAG 413

FN554889_0379: domain 1 of 1, from 150 to 214: score 66.5, E = 3.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++a +sH+LRTPL+++r++ae+L++ ++
FN554889_0 150 SRRELVAWISHDLRTPLAGLRAMAEALED----------GVAADP-- 184

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ i+ e+e l+ ++ dl +lsri ag
FN554889_0 185 ----------YRYLRQIRTEVENLDGMVGDLFELSRIHAG 214

FN554889_4011: domain 1 of 1, from 238 to 303: score 65.4, E = 7.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+a++sH+LRTPLta+r+ ++ + + ++ +e
FN554889_4 238 SQRIFVADASHQLRTPLTALRLSLDNIAD---------GTDDEFV-- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re +e + e+ r++rL+n lL l+r+ea
FN554889_4 274 ----------REDVEQATAEVVRMSRLVNGLLVLARAEAK 303

FN554889_1359: domain 1 of 1, from 249 to 316: score 62.8, E = 4.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++ HELRTPLtaI+gya+l+l+ + ++e ++
FN554889_1 249 RLRRFVADAGHELRTPLTAIQGYAQLALR--------PERRPEREL- 286

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ + i + aer++ L++dl l+ ++ +
FN554889_1 287 ----------REANRFIAQNAERMSLLVDDLQLLATLDRE 316

FN554889_4822: domain 1 of 1, from 155 to 221: score 61.8, E = 7.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHEL+TP+ a+++++e+ + ++e +
FN554889_4 155 VRRDFVANVSHELKTPVGALSLLSEAVMG---------ASDDPEAV- 191

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +++ ea rl +L+++l dlsr ++
FN554889_4 192 ----------ERFAGRMQIEATRLTNLVQELIDLSRVQND 221

FN554889_0089: domain 1 of 1, from 4 to 68: score 59.3, E = 4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++++++HELRTPLt Irg +e+ ++ l e++
FN554889_0 4 QRKAMVSDIAHELRTPLTNIRGWLEVTRD----------GLVEPD-- 38

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++ ++++ea l+++i+dl dl+ ++ag
FN554889_0 39 ----------LELIASLHDEALLLQHIIDDLQDLAAADAG 68

FN554889_2831: domain 1 of 1, from 224 to 282: score 55.0, E = 6.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++f+a+++HELRTPLt++ ++aelL
FN554889_2 224 GEQRFTADVAHELRTPLTGLHAAAELLPP------------------ 252

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +e +++ + l+ L +dlL++sr++ag
FN554889_2 253 ----------GRPTELVRDRVAALRTLTEDLLEISRLDAG 282

FN554889_2293: domain 1 of 1, from 200 to 266: score 54.9, E = 7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+ n+sHELRTPL+ r+++e+ l ++ + ++
FN554889_2 200 AQQRFVGNASHELRTPLAINRTLLEVHLS---------DPGAPTEL- 236

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +t+l er ++L++ lL l+r +++
FN554889_2 237 ----------QQLGKTLLATNERSEQLVEGLLLLARSDNQ 266

FN554889_8627: domain 1 of 1, from 240 to 304: score 54.4, E = 9.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+a +sH+L+TPLta+r +e + +l++
FN554889_8 240 SQRAFAAEASHQLKTPLTALRIRLENFEP----------HLDPAV-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ +++e+erl r+i+ lL l+r+e+
FN554889_8 275 ----------HDSLDEAIDETERLARMIQGLLSLARLEST 304

FN554889_3795: domain 1 of 1, from 241 to 299: score 53.1, E = 2.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ +a+++HELRTP+t+++++aelL
FN554889_3 241 AERRVTADIAHELRTPVTGLLTAAELLPP------------------ 269

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e +++ a+ ++ L++d+L+ +r++
FN554889_3 270 ----------GRPSELVRDRAQAMRTLVEDVLEVARLDGA 299

FN554889_3731: domain 1 of 1, from 258 to 325: score 51.8, E = 5.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++ ++ HELRTPLt++r++++lL++ +el++ r
FN554889_3 258 DQRRLVQDAGHELRTPLTSLRTNISLLRR--------IDELPPRVR- 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ + +ea l +L+n+l dl+ ++
FN554889_3 296 ----------AELVDDLSQEALELTDLVNELVDLAAGQSS 325

FN554889_2364: domain 1 of 1, from 253 to 316: score 50.9, E = 9.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+a++sH+LR+PL+a+++ ++lL el +e +ee
FN554889_2 253 QQRAFVADASHQLRNPLAALLLRIDLLALEL-------PEGNEEI-- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e++rl + ++dlLdl+ +e+
FN554889_2 291 --------------ASVRTEGKRLAQVLDDLLDLALAEHV 316

FN554889_0255: domain 1 of 1, from 206 to 266: score 49.7, E = 2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f+a+++HELR+P++++++ +el +++
FN554889_0 206 RHKQFVADAAHELRNPVATLSARLELGMTQA---------------- 236

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +l ++ r+ +L dlL l+r++ g
FN554889_0 237 ----------PDLVTEALTDVARIKELTGDLLLLARLDGG 266

FN554889_4772: domain 1 of 1, from 256 to 327: score 47.6, E = 8.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a++ HELRTPLt++r+++elL + +e + ++
FN554889_4 256 LQQQLIADAGHELRTPLTSLRTNIELLTR---------SEETGRPIP 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
R + +l +++ + l +Li dl +lsr e+g
FN554889_4 294 ADDR------KALLASVKAQMTELAALIGDLQELSRSESG 327

FN554889_2713: domain 1 of 1, from 267 to 328: score 47.1, E = 1.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+a++sHELR P++++r+ +e+ + ++
FN554889_2 267 RQRAFVADASHELRSPIASLRTQLEVGAA-------------HPE-- 298

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
le + +++ rl++L dlL l+r++ag
FN554889_2 299 ----------LLDLEGAVEDTVRLQSLAADLLLLARLDAG 328

FN554889_6013: domain 1 of 1, from 283 to 347: score 46.5, E = 1.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ +sH+L+TPL+a+r+ +e L+ +
FN554889_6 283 SQRAFAGEASHQLKTPLAALRLRLENLEP----------DIARRA-- 317

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l+ + e++rl r+++ lL ++r+e+
FN554889_6 318 ----------RPSLDAAVTETDRLARMVEGLLAMARLEEA 347

FN554889_5561: domain 1 of 1, from 225 to 276: score 38.2, E = 3.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+e++a+lsH LRTPLt++r++a L + +++ e++
FN554889_5 225 NERELAADLSHRLRTPLTVLRLNAASLGD---------GPAAEQT-- 260

peLRledpeyreyletilreaerllr<-*
r ++e ++re++ + r
FN554889_5 261 ----------RAAVEQLEREVDTIIR 276

FN554889_5285: domain 1 of 1, from 202 to 267: score 37.1, E = 7.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++a++sH+LRTPLta+++ +e + t+ +
FN554889_5 202 AERRLAADASHQLRTPLTALSMRLEEITL---------TDDLATV-- 237

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +++l ++erl + +++lL+ sr +
FN554889_5 238 ----------KEEAHIALTQVERLTDVVERLLTNSRDPRN 267

FN554889_4066: domain 1 of 1, from 216 to 290: score 32.7, E = 1.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldk...vlagdtelsee
a++ ++ ++ HEL+TPLt++r+++elL + ld+++++ d++l++e
FN554889_4 216 AQRLLAEDATHELKTPLTSLRLNVELLIR-LDRrgtL---DSALPAE 258

qrlpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++l+ + ++ l+ L+ +l dl+r +
FN554889_4 259 SR-----------TRLLNDLGAQVAELSTLVAELTDLARGDVS 290


Histogram of all scores:
score obs exp (one = represents 30 sequences)
----- --- ---
-15 1 0|=
-14 31 0|==
-13 105 6|*===
-12 376 199|======*======
-11 806 1036|=========================== *
-10 1417 1923|================================================ *
-9 1725 1986|==========================================================*
-8 1583 1487|=================================================*===
-7 1101 937|===============================*=====
-6 656 539|=================*====
-5 423 295|=========*=====
-4 214 158|=====*==
-3 125 83|==*==
-2 65 43|=*=
-1 37 22|*=
0 14 11|*
1 17 6|*
2 4 3|*
3 6 1|*
4 1 0|=
5 2 0|=
6 0 0|
7 0 0|
8 1 0|=
9 1 0|=
10 1 0|=
> 11 34 -|==


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 2043.1375
P(chi-square) = 0

Total sequences searched: 8809

Whole sequence top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 34K


Acknowledgements:

This research is funded by:

Developed by: