Genome Atlas - 3.0 (beta)

	Crenarchaeota	Euryarchaeota	Nanoarchaeota
	Other Archaea

Classification of phyla is from NCBI page

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82 projects found

Available Tables

Row	Organism	Tax Group	NCBI Project ID	Replicons	Total Size (bp)	Number of genes	5S rRNA count	16S rRNA count	23S rRNA count	tRNA count	% AT

1	Sulfolobus solfataricus 98/2		30989	1	N/A	N/A	N/A	N/A	N/A	N/A	N/A
2	Methanosarcina barkeri str. Fusaro	AEMM	103	2	4,873,766	3,625	0	3	3	62	60.8
3	Archaeoglobus fulgidus DSM 4304	AEAA	104	1	2,178,400	2,407	0	1	1	46	51.4
4	Sulfolobus solfataricus P2	ACTS	108	1	2,992,245	2,995	0	1	1	46	64.2
5	Thermoplasma acidophilum DSM 1728	AETT	110	1	1,564,906	1,478	0	1	1	45	54.0
6	Pyrobaculum aerophilum str. IM2	ACTT	172	1	2,222,430	2,605	0	1	1	42	48.6
7	Thermoplasma volcanium GSS1	AETT	206	1	1,584,804	1,526	0	1	1	45	60.1
8	Hyperthermus butylicus DSM 5456	ACTD	208	1	1,667,163	1,602	0	1	1	46	46.3
9	Aeropyrum pernix K1	ACTD	211	1	1,669,696	1,700	0	1	1	50	43.7
10	Methanothermobacter thermautotrophicus str. Delta H	AEMMb	289	1	1,751,377	1,869	0	2	2	39	50.5
11	Methanosarcina acetivorans C2A	AEMM	290	1	5,751,492	4,540	0	3	3	59	57.3
12	Methanococcoides burtonii DSM 6242	AEMM	9634	1	2,575,032	2,273	0	3	3	49	59.2
13	Methanococcus maripaludis S2	AEMMc	10632	1	1,661,137	1,722	0	3	3	36	66.9
14	Picrophilus torridus DSM 9790	AETT	10641	1	1,545,895	1,535	0	1	1	47	64.0
15	Methanospirillum hungatei JF-1	AEMM	13015	1	3,544,738	3,139	0	4	4	51	54.9
16	Thermococcus kodakarensis KOD1	AETT	13213	1	2,088,737	2,306	0	1	1	46	48.0
17	Ignicoccus hospitalis KIN4/I	ACTD	13914	1	1,297,538	1,434	0	1	1	46	43.5
18	Sulfolobus acidocaldarius DSM 639	ACTS	13935	1	2,225,959	2,223	0	1	1	48	63.3
19	Methanosphaera stadtmanae DSM 3091	AEMMb	15579	1	1,767,403	1,534	0	4	4	42	72.4
20	Pyrobaculum arsenaticum DSM 13514	ACTT	15582	1	2,121,076	2,298	0	1	1	43	44.9
21	Thermoproteus neutrophilus V24Sta	ACTT	15645	1	1,769,823	1,966	0	1	1	44	40.1
22	Methanosaeta thermophila PT	AEMM	15765	1	1,879,471	1,696	0	2	2	46	46.5
23	Thermofilum pendens Hrk 5	ACTT	16331	2	1,813,393	1,876	0	1	1	39	42.3
24	Candidatus Korarchaeum cryptofilum OPF8	AKC	16525	1	1,590,757	1,602	0	1	1	46	51.0
25	Pyrobaculum islandicum DSM 4184	ACTT	16743	1	1,826,402	1,978	0	1	1	45	50.4
26	Caldivirga maquilingensis IC-167	ACTT	17421	1	2,077,567	1,963	0	1	1	45	56.9
27	Metallosphaera sedula DSM 5348	ACTS	17447	1	2,191,517	2,256	0	1	1	46	53.8
28	Staphylothermus marinus F1	ACTD	17449	1	1,570,485	1,570	0	1	1	44	64.3
29	Methanococcus maripaludis C5	AEMMc	17641	2	1,789,046	1,822	0	3	3	36	67.0
30	Pyrobaculum calidifontis JCM 11548	ACTT	18111	1	2,009,313	2,149	0	1	1	24	42.8
31	Candidatus Methanoregula boonei 6A8	AEMM	18505	1	2,542,943	2,450	0	1	1	48	45.5
32	Methanococcus aeolicus Nankai-3	AEMMc	18641	1	1,569,500	1,490	0	2	2	38	70.0
33	Sulfolobus islandicus Y.N.15.51	ACTS	18651	2	2,854,410	2,900	0	1	1	47	64.7
34	Methanobrevibacter smithii ATCC 35061	AEMMb	18653	1	1,853,160	1,795	0	2	2	36	69.0
35	Sulfolobus islandicus L.D.8.5	ACTS	18803	2	2,748,647	2,949	0	1	1	46	64.7
36	Sulfolobus islandicus M.16.4	ACTS	18807	1	2,586,647	2,736	0	1	1	47	65.0
37	Methanococcus maripaludis C7	AEMMc	18819	1	1,772,694	1,788	0	3	3	36	66.7
38	Sulfolobus islandicus M.14.25	ACTS	18871	1	2,608,832	2,609	0	1	1	46	64.9
39	Sulfolobus islandicus M.16.27	ACTS	18873	1	2,692,402	2,657	0	1	1	46	65.0
40	Sulfolobus islandicus L.S.2.15	ACTS	18987	1	2,736,272	2,738	0	1	1	48	64.9
41	Nitrosopumilus maritimus SCM1	ACTM	19265	1	1,645,259	1,795	0	1	1	40	65.8
42	Sulfolobus islandicus Y.G.57.14	ACTS	19487	1	2,702,058	2,905	0	1	1	48	64.6
43	Methanococcus maripaludis C6	AEMMc	19639	1	1,744,193	1,826	0	3	3	36	66.6
44	uncultured methanogenic archaeon RC-I	AEE	19641	1	3,179,916	3,085	0	3	3	51	45.4
45	Methanococcus voltae A3	AEMMc	20131	1	1,936,387	1,717	0	2	2	39	71.4
46	Methanocella paludicola SANAE	AEMM	20361	1	2,957,635	3,004	0	2	2	47	45.1
47	Thermococcus onnurineus NA1	AETT	20773	1	1,847,607	1,976	0	1	1	46	48.7
48	Desulfurococcus kamchatkensis 1221n	ACTD	28141	1	1,365,223	1,471	0	1	1	48	54.7
49	Methanosphaerula palustris E1-9c	AEC	29381	1	2,922,917	2,655	0	3	3	56	44.7
50	Archaeoglobus profundus DSM 5631	AEAA	32583	2	1,563,423	1,823	0	1	1	47	58.0
51	Ferroglobus placidus DSM 10642	AEAA	33635	1	2,196,266	2,480	0	1	1	50	55.9
52	Thermococcus gammatolerans EJ3	AETT	33671	1	2,045,438	2,157	0	1	1	46	46.4
53	Staphylothermus hellenicus DSM 12710	ACTD	33683	1	1,580,347	1,599	0	1	1	44	63.2
54	Thermococcus sibiricus MM 739	AETT	34531	1	1,845,800	2,037	0	1	1	46	59.8
55	Methanobrevibacter ruminantium M1	AEMMb	34681	1	2,937,203	2,217	0	2	2	58	67.4
56	Thermosphaera aggregans DSM 11486	ACTD	36571	1	1,316,595	1,387	0	1	1	44	53.3
57	Methanohalobium evestigatum Z-7303	AEMM	37945	2	2,406,232	2,254	0	2	2	50	63.6
58	Aciduliprofundum boonei T469	AEA	38403	1	1,486,778	1,544	0	1	1	46	60.8
59	Halobacterium salinarum R1	AEHH	106	5	2,668,776	2,886	1	1	1	47	34.3
60	Methanopyrus kandleri AV19	AEMM	294	1	1,694,969	1,691	1	1	1	33	38.8
61	Nanoarchaeum equitans Kin4-M	ANN	9599	1	490,885	536	1	1	1	38	68.4
62	Natronomonas pharaonis DSM 2160	AEHH	15742	3	2,749,696	2,843	1	1	1	47	36.9
63	Methanoculleus marisnigri JR1	AEMM	16330	1	2,478,101	2,489	1	1	1	48	37.9
64	Halorhabdus utahensis DSM 12940	AEHH	29305	1	3,116,795	2,998	1	1	1	45	37.1
65	Halalkalicoccus jeotgali B3	AEHH	49517	7	3,698,650	3,873	1	1	1	49	37.5
66	Methanocaldococcus jannaschii DSM 2661	AEMMc	102	3	1,739,927	1,770	2	2	2	37	68.7
67	Pyrococcus abyssi GE5	AETT	179	2	1,768,562	1,784	2	1	1	46	55.3
68	Pyrococcus horikoshii OT3	AETT	207	1	1,738,505	2,061	2	1	1	47	58.1
69	Pyrococcus furiosus DSM 3638	AETT	287	1	1,908,256	2,065	2	1	1	46	59.2
70	Haloferax volcanii DS2	AEHH	12524	5	4,012,900	4,018	2	2	2	51	34.5
71	Methanocaldococcus infernus ME	AEMMc	32611	1	1,328,194	1,441	2	2	2	38	66.4
72	Methanocaldococcus fervens AG86	AEMMc	32615	2	1,507,251	1,581	2	2	2	37	67.8
73	Methanocaldococcus vulcanius M7	AEMMc	33047	3	1,761,737	1,742	2	2	2	37	68.4
74	Methanocaldococcus sp. FS406-22	AEMMc	37943	2	1,773,136	1,816	2	2	2	37	68.0
75	Methanosarcina mazei Go1	AEMM	300	1	4,096,345	3,371	3	3	3	57	58.5
76	Methanocorpusculum labreanum Z	AEMM	18109	1	1,804,962	1,739	3	3	3	52	50.0
77	Halorubrum lacusprofundi ATCC 49239	AEHH	18455	3	3,692,576	3,560	3	3	3	51	36.0
78	Halomicrobium mukohataei DSM 12286	AEHH	27945	2	3,332,349	3,349	3	3	3	47	34.5
79	Methanohalophilus mahii DSM 5219	AEMM	30711	1	2,012,424	1,987	3	3	3	52	57.4
80	Haloterrigena turkmenica DSM 5511	AEHH	30411	7	5,440,782	5,113	4	3	3	52	35.7
81	Natrialba magadii ATCC 43099	AEHH	30691	4	4,443,643	4,212	4	3	4	49	39.0
82	Methanococcus vannielii SB	AEMMc	17889	1	1,720,048	1,678	5	4	4	36	68.7

Acknowledgements:

This research is funded by:

A grant from the Danish Research Foundation.
A grant from the Danish Center for Scientific Computing DCSC

Developed by:

Original concept: Peter Hallin et al.
Redesign, Current Maintainer: Stefano Borini