Genome Atlas - 3.0 (beta)

	Crenarchaeota	Euryarchaeota	Nanoarchaeota
	Other Archaea

Classification of phyla is from NCBI page

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82 projects found

Available Tables

Row	Organism	Tax Group	NCBI Project ID	Replicons	Total Size (bp)	% AT	HisKA Count	HisKA 1 Count	HisKA 2 Count	HisKA 3 Count	HWE HK Count	RRReceiver Count

1	Sulfolobus solfataricus 98/2		30989	1	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
2	Methanocaldococcus jannaschii DSM 2661	AEMMc	102	3	1,739,927	68.7	0	0	0	0	0	0
3	Sulfolobus solfataricus P2	ACTS	108	1	2,992,245	64.2	0	0	0	0	0	0
4	Thermoplasma acidophilum DSM 1728	AETT	110	1	1,564,906	54.0	0	0	0	0	0	0
5	Pyrobaculum aerophilum str. IM2	ACTT	172	1	2,222,430	48.6	0	0	0	0	0	0
6	Pyrococcus abyssi GE5	AETT	179	2	1,768,562	55.3	0	0	0	0	0	2
7	Thermoplasma volcanium GSS1	AETT	206	1	1,584,804	60.1	0	0	0	0	0	0
8	Pyrococcus horikoshii OT3	AETT	207	1	1,738,505	58.1	0	0	0	0	0	2
9	Hyperthermus butylicus DSM 5456	ACTD	208	1	1,667,163	46.3	0	0	0	0	0	0
10	Aeropyrum pernix K1	ACTD	211	1	1,669,696	43.7	0	0	0	0	0	0
11	Pyrococcus furiosus DSM 3638	AETT	287	1	1,908,256	59.2	0	0	0	0	0	0
12	Methanopyrus kandleri AV19	AEMM	294	1	1,694,969	38.8	0	0	0	0	0	0
13	Nanoarchaeum equitans Kin4-M	ANN	9599	1	490,885	68.4	0	0	0	0	0	0
14	Picrophilus torridus DSM 9790	AETT	10641	1	1,545,895	64.0	0	0	0	0	0	0
15	Thermococcus kodakarensis KOD1	AETT	13213	1	2,088,737	48.0	0	0	0	0	0	2
16	Ignicoccus hospitalis KIN4/I	ACTD	13914	1	1,297,538	43.5	0	0	0	0	0	0
17	Sulfolobus acidocaldarius DSM 639	ACTS	13935	1	2,225,959	63.3	0	0	0	0	0	0
18	Methanosphaera stadtmanae DSM 3091	AEMMb	15579	1	1,767,403	72.4	0	0	0	0	0	0
19	Pyrobaculum arsenaticum DSM 13514	ACTT	15582	1	2,121,076	44.9	0	0	0	0	0	0
20	Thermoproteus neutrophilus V24Sta	ACTT	15645	1	1,769,823	40.1	0	0	0	0	0	0
21	Thermofilum pendens Hrk 5	ACTT	16331	2	1,813,393	42.3	0	0	0	0	0	0
22	Candidatus Korarchaeum cryptofilum OPF8	AKC	16525	1	1,590,757	51.0	0	0	0	0	0	0
23	Pyrobaculum islandicum DSM 4184	ACTT	16743	1	1,826,402	50.4	0	0	0	0	0	0
24	Caldivirga maquilingensis IC-167	ACTT	17421	1	2,077,567	56.9	0	0	0	0	0	0
25	Metallosphaera sedula DSM 5348	ACTS	17447	1	2,191,517	53.8	0	0	0	0	0	0
26	Staphylothermus marinus F1	ACTD	17449	1	1,570,485	64.3	0	0	0	0	0	0
27	Methanocorpusculum labreanum Z	AEMM	18109	1	1,804,962	50.0	0	0	0	0	0	0
28	Pyrobaculum calidifontis JCM 11548	ACTT	18111	1	2,009,313	42.8	0	0	0	0	0	0
29	Sulfolobus islandicus Y.N.15.51	ACTS	18651	2	2,854,410	64.7	0	0	0	0	0	0
30	Methanobrevibacter smithii ATCC 35061	AEMMb	18653	1	1,853,160	69.0	0	0	0	0	0	0
31	Sulfolobus islandicus L.D.8.5	ACTS	18803	2	2,748,647	64.7	0	0	0	0	0	0
32	Sulfolobus islandicus M.16.4	ACTS	18807	1	2,586,647	65.0	0	0	0	0	0	0
33	Sulfolobus islandicus M.14.25	ACTS	18871	1	2,608,832	64.9	0	0	0	0	0	0
34	Sulfolobus islandicus M.16.27	ACTS	18873	1	2,692,402	65.0	0	0	0	0	0	0
35	Sulfolobus islandicus L.S.2.15	ACTS	18987	1	2,736,272	64.9	0	0	0	0	0	0
36	Sulfolobus islandicus Y.G.57.14	ACTS	19487	1	2,702,058	64.6	0	0	0	0	0	0
37	Thermococcus onnurineus NA1	AETT	20773	1	1,847,607	48.7	0	0	0	0	0	2
38	Desulfurococcus kamchatkensis 1221n	ACTD	28141	1	1,365,223	54.7	0	0	0	0	0	0
39	Methanocaldococcus infernus ME	AEMMc	32611	1	1,328,194	66.4	0	0	0	0	0	2
40	Methanocaldococcus vulcanius M7	AEMMc	33047	3	1,761,737	68.4	0	0	0	0	0	2
41	Thermococcus gammatolerans EJ3	AETT	33671	1	2,045,438	46.4	0	0	0	0	0	1
42	Staphylothermus hellenicus DSM 12710	ACTD	33683	1	1,580,347	63.2	0	0	0	0	0	0
43	Thermococcus sibiricus MM 739	AETT	34531	1	1,845,800	59.8	0	0	0	0	0	0
44	Methanobrevibacter ruminantium M1	AEMMb	34681	1	2,937,203	67.4	0	0	0	0	0	0
45	Thermosphaera aggregans DSM 11486	ACTD	36571	1	1,316,595	53.3	0	0	0	0	0	0
46	Methanothermobacter thermautotrophicus str. Delta H	AEMMb	289	1	1,751,377	50.5	16	1	15	0	0	11
47	Methanococcus aeolicus Nankai-3	AEMMc	18641	1	1,569,500	70.0	1	1	0	0	0	1
48	uncultured methanogenic archaeon RC-I	AEE	19641	1	3,179,916	45.4	15	1	14	0	0	13
49	Methanococcus voltae A3	AEMMc	20131	1	1,936,387	71.4	1	1	0	0	0	3
50	Methanocella paludicola SANAE	AEMM	20361	1	2,957,635	45.1	1	1	0	0	0	8
51	Archaeoglobus profundus DSM 5631	AEAA	32583	2	1,563,423	58.0	1	1	0	0	0	4
52	Methanocaldococcus fervens AG86	AEMMc	32615	2	1,507,251	67.8	1	1	0	0	0	3
53	Methanocaldococcus sp. FS406-22	AEMMc	37943	2	1,773,136	68.0	1	1	0	0	0	1
54	Methanococcus maripaludis S2	AEMMc	10632	1	1,661,137	66.9	2	2	0	0	0	3
55	Methanococcus maripaludis C5	AEMMc	17641	2	1,789,046	67.0	2	2	0	0	0	3
56	Methanococcus maripaludis C7	AEMMc	18819	1	1,772,694	66.7	2	2	0	0	0	3
57	Methanococcus maripaludis C6	AEMMc	19639	1	1,744,193	66.6	2	2	0	0	0	3
58	Ferroglobus placidus DSM 10642	AEAA	33635	1	2,196,266	55.9	2	2	0	0	0	4
59	Aciduliprofundum boonei T469	AEA	38403	1	1,486,778	60.8	2	2	0	0	0	4
60	Candidatus Methanoregula boonei 6A8	AEMM	18505	1	2,542,943	45.5	14	3	11	0	0	57
61	Methanosarcina barkeri str. Fusaro	AEMM	103	2	4,873,766	60.8	24	4	20	0	0	13
62	Methanococcus vannielii SB	AEMMc	17889	1	1,720,048	68.7	4	4	0	0	0	3
63	Halalkalicoccus jeotgali B3	AEHH	49517	7	3,698,650	37.5	4	4	0	0	0	10
64	Methanosaeta thermophila PT	AEMM	15765	1	1,879,471	46.5	7	7	0	0	0	5
65	Methanoculleus marisnigri JR1	AEMM	16330	1	2,478,101	37.9	8	8	0	0	0	11
66	Methanosarcina mazei Go1	AEMM	300	1	4,096,345	58.5	30	9	21	0	0	17
67	Halobacterium salinarum R1	AEHH	106	5	2,668,776	34.3	10	10	0	0	0	7
68	Nitrosopumilus maritimus SCM1	ACTM	19265	1	1,645,259	65.8	10	10	0	0	0	10
69	Methanohalobium evestigatum Z-7303	AEMM	37945	2	2,406,232	63.6	24	12	12	0	0	11
70	Archaeoglobus fulgidus DSM 4304	AEAA	104	1	2,178,400	51.4	13	13	0	0	0	11
71	Natronomonas pharaonis DSM 2160	AEHH	15742	3	2,749,696	36.9	13	13	0	0	0	14
72	Methanosphaerula palustris E1-9c	AEC	29381	1	2,922,917	44.7	16	13	3	0	0	44
73	Methanosarcina acetivorans C2A	AEMM	290	1	5,751,492	57.3	48	14	34	0	0	20
74	Halomicrobium mukohataei DSM 12286	AEHH	27945	2	3,332,349	34.5	14	14	0	0	0	15
75	Natrialba magadii ATCC 43099	AEHH	30691	4	4,443,643	39.0	15	15	0	0	0	17
76	Methanospirillum hungatei JF-1	AEMM	13015	1	3,544,738	54.9	21	16	5	0	0	85
77	Haloferax volcanii DS2	AEHH	12524	5	4,012,900	34.5	18	18	0	0	0	14
78	Halorubrum lacusprofundi ATCC 49239	AEHH	18455	3	3,692,576	36.0	18	18	0	0	0	9
79	Methanohalophilus mahii DSM 5219	AEMM	30711	1	2,012,424	57.4	22	19	3	0	0	12
80	Methanococcoides burtonii DSM 6242	AEMM	9634	1	2,575,032	59.2	25	21	4	0	0	18
81	Halorhabdus utahensis DSM 12940	AEHH	29305	1	3,116,795	37.1	21	21	0	0	0	24
82	Haloterrigena turkmenica DSM 5511	AEHH	30411	7	5,440,782	35.7	38	38	0	0	0	21

Acknowledgements:

This research is funded by:

A grant from the Danish Research Foundation.
A grant from the Danish Center for Scientific Computing DCSC

Developed by:

Original concept: Peter Hallin et al.
Redesign, Current Maintainer: Stefano Borini