Genome Atlas - 3.0 (beta)

39 projects found

Available Tables

Row	Organism	Tax Group	NCBI Project ID	Replicons	Total Size (bp)	% AT	% Global Direct Repeats	% Global Inverted Repeats	% Local Direct Repeats	% Local Inverted Repeats	% Local Mirror Repeats	% Local Everted Repeats	% Simple Repeats

1	Thermosynechococcus elongatus BP-1	BCyano CT	308	1	2,593,857	46.1	5.70	4.60	3.80	1.40	2.00	1.60	0.30
2	Synechococcus sp. CC9311	BCyano CS	12530	1	2,606,748	47.5	1.90	1.10	3.70	2.70	2.00	1.50	0.30
3	Cyanothece sp. PCC 7425	BCyano CC	28337	4	5,786,110	49.4	4.19	3.78	4.33	1.55	2.01	1.42	0.29
4	Prochlorococcus marinus str. MIT 9313	BCyano PP	220	1	2,410,873	49.3	2.80	2.10	3.80	2.70	2.10	1.40	0.30
5	Acaryochloris marina MBIC11017	BCyano A	12997	10	8,361,599	53.0	6.64	4.75	3.75	2.70	2.14	1.72	0.23
6	Synechococcus elongatus PCC 6301	BCyano CS	13282	1	2,696,255	44.5	0.80	0.90	4.20	2.50	2.20	1.90	0.30
7	Prochlorococcus marinus str. MIT 9303	BCyano PP	13496	1	2,682,675	50.0	4.10	2.10	4.00	2.70	2.20	1.50	0.30
8	Synechococcus sp. CC9902	BCyano CS	13655	1	2,234,828	45.8	0.70	1.00	3.70	2.90	2.20	1.70	0.30
9	Synechococcus elongatus PCC 7942	BCyano CS	10645	2	2,742,269	44.6	0.72	0.88	4.18	2.49	2.21	1.90	0.30
10	Synechococcus sp. PCC 7002	BCyano CS	28247	7	3,409,935	50.8	0.73	0.82	4.18	1.72	2.47	1.74	0.29
11	Synechococcus sp. WH 7803	BCyano CS	13642	1	2,366,980	39.8	1.10	1.10	5.30	3.70	2.50	2.10	0.40
12	Synechococcus sp. RCC307	BCyano CS	13654	1	2,224,914	39.2	0.90	0.50	6.80	4.30	2.50	2.10	0.50
13	Synechococcus sp. JA-2-3B'a(2-13)	BCyano CS	16252	1	3,046,682	41.5	5.30	5.10	5.60	2.20	2.50	1.90	0.50
14	Synechocystis sp. PCC 6803	BCyano CS	60	5	3,947,019	52.6	4.64	2.59	4.36	1.86	2.60	1.95	0.29
15	Synechococcus sp. CC9605	BCyano CS	13643	1	2,510,659	40.8	2.20	1.90	5.60	3.70	2.70	2.20	0.40
16	Synechococcus sp. WH 8102	BCyano CS	230	1	2,434,428	40.6	3.20	0.80	5.90	3.80	2.80	2.30	0.40
17	Synechococcus sp. JA-3-3Ab	BCyano CS	16251	1	2,932,766	39.8	6.80	6.60	6.40	3.00	3.00	2.30	0.40
18	Nostoc sp. PCC 7120	BCyano NN	244	7	7,211,789	58.7	5.60	3.08	5.28	4.19	3.10	2.49	0.66
19	Nostoc punctiforme PCC 73102	BCyano NN	216	6	9,059,191	58.7	7.72	5.39	5.36	4.48	3.11	2.58	0.59
20	Anabaena variabilis ATCC 29413	BCyano NN	10642	5	7,105,752	58.6	5.36	4.03	5.37	4.34	3.20	2.59	0.66
21	Prochlorococcus marinus str. MIT 9211	BCyano PP	13551	1	1,688,963	62.0	1.20	0.10	5.20	3.90	3.80	2.80	0.30
22	'Nostoc azollae' 0708	BCyano NN	30807	3	5,486,145	61.6	18.06	17.18	5.70	4.14	3.82	2.92	0.88
23	Cyanothece sp. PCC 8802	BCyano CC	28339	5	4,803,347	60.2	3.24	3.14	5.87	3.73	3.93	3.01	0.02
24	Gloeobacter violaceus PCC 7421	BCyano GG	9606	1	4,659,019	38.0	4.10	2.80	6.70	4.30	4.00	3.40	0.50
25	Microcystis aeruginosa NIES-843	BCyano CM	27835	1	5,842,795	57.7	24.00	20.50	6.70	3.80	4.00	2.60	1.20
26	Cyanothece sp. PCC 8801	BCyano CC	20503	4	4,787,694	60.2	4.13	3.17	5.82	3.71	4.02	3.01	0.59
27	Prochlorococcus marinus subsp. marinus str. CCMP1375	BCyano PP	419	1	1,751,080	63.6	0.80	0.30	6.00	4.40	4.30	3.30	0.40
28	Cyanothece sp. ATCC 51142	BCyano CC	20319	6	5,460,377	62.1	4.14	2.23	6.19	3.91	4.75	3.50	0.49
29	Cyanothece sp. PCC 7424	BCyano CC	20479	7	6,554,169	61.5	6.47	5.85	7.26	4.35	4.81	3.56	0.86
30	Prochlorococcus marinus str. NATL2A	BCyano PP	13911	1	1,842,899	64.9	2.70	1.50	7.40	5.50	5.70	4.20	0.40
31	Prochlorococcus marinus str. NATL1A	BCyano PP	15660	1	1,864,731	65.0	1.80	0.80	7.30	5.60	6.00	4.30	0.30
32	Trichodesmium erythraeum IMS101	BCyano OT	318	1	7,750,108	65.9	18.40	12.40	9.80	6.40	7.00	4.90	0.80
33	cyanobacterium UCYN-A	BCyano C	30917	1	1,443,806	68.9	0.20	1.00	9.90	9.90	8.80	7.80	0.50
34	Prochlorococcus marinus str. MIT 9312	BCyano PP	13910	1	1,709,204	68.8	0.90	0.20	10.90	8.50	9.50	7.50	0.60
35	Prochlorococcus marinus str. MIT 9301	BCyano PP	15746	1	1,641,879	68.7	0.50	0.20	10.80	8.30	9.50	7.20	0.50
36	Prochlorococcus marinus str. AS9601	BCyano PP	13548	1	1,669,886	68.7	1.10	0.20	10.70	8.40	9.60	7.40	0.60
37	Prochlorococcus marinus str. MIT 9215	BCyano PP	18633	1	1,738,790	68.8	1.00	0.30	11.10	8.60	9.90	7.60	0.60
38	Prochlorococcus marinus subsp. pastoris str. CCMP1986	BCyano PP	213	1	1,657,990	69.2	0.80	0.30	11.50	8.90	10.20	7.80	0.60
39	Prochlorococcus marinus str. MIT 9515	BCyano PP	13617	1	1,704,176	69.2	0.70	0.20	11.30	8.80	10.20	7.70	0.50

Acknowledgements:

This research is funded by:

A grant from the Danish Research Foundation.
A grant from the Danish Center for Scientific Computing DCSC

Developed by:

Original concept: Peter Hallin et al.
Redesign, Current Maintainer: Stefano Borini