Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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235 projects found  

Available Tables
RowOrganismTax GroupNCBI
Project ID
RepliconsTotal Size (bp)Number of
genes
5S rRNA
count
16S rRNA
count
23S rRNA
count
tRNA
count
% AT
1Clostridium ljungdahlii ATCC 49587134921N/AN/AN/AN/AN/AN/AN/A
2Streptococcus suis GZ1187371N/AN/AN/AN/AN/AN/AN/A
3Lactobacillus casei str. Zhang285371N/AN/AN/AN/AN/AN/AN/A
4Streptococcus mutans NN2025289971N/AN/AN/AN/AN/AN/AN/A
5Clostridium difficile R20291380391N/AN/AN/AN/AN/AN/AN/A
6Thermincola sp. JR414671N/AN/AN/AN/AN/AN/AN/A
7Lactobacillus salivarius CECT 5713435354N/AN/AN/AN/AN/AN/AN/A
8Lactococcus lactis subsp. cremoris NZ9000466231N/AN/AN/AN/AN/AN/AN/A
9Symbiobacterium thermophilum IAM 14863BFirm LS1299413,566,1353,3377669831.3
10Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446BFirm BA2940543,205,6863,0846666438.1
11Candidatus Desulforudis audaxviator MP104CBFirm CC2104712,349,4762,1572224539.1
12Ammonifex degensii KC4BFirm CT1239022,157,0672,0802224840.5
13Bacillus tusciae DSM 2912BFirm BA3134513,384,7663,1505556040.9
14Heliobacterium modesticaldum Ice1BFirm CC1342713,075,4073,00010101010943.0
15Acidaminococcus fermentans DSM 20731BFirm CC3368512,329,7692,0266666044.2
16Moorella thermoacetica ATCC 39073BFirm CT1064812,628,7842,4631115144.2
17Pelotomaculum thermopropionicum SIBFirm CC1902313,025,3752,9202225147.0
18Geobacillus sp. C56-T3BFirm BB4170113,650,8133,3159888847.5
19Geobacillus sp. Y412MC61BFirm BB3053723,667,9013,4469888847.7
20Geobacillus kaustophilus HTA426BFirm BB1323323,592,6663,5409998748.0
21Lactobacillus fermentum CECT 5716BFirm LL4353312,100,4491,0515555748.4
22Lactobacillus fermentum IFO 3956BFirm LL1897912,098,6851,8435555748.5
23Geobacillus sp. Y412MC10BFirm BB2777717,121,6656,2388887348.8
24Syntrophothermus lipocalidus DSM 12680BFirm CC3787312,405,5592,3132224649.0
25Paenibacillus sp. JDR-2BFirm BP2039917,184,9306,2131112128849.7
26Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842BFirm LL1687111,864,9982,0969999550.3
27Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365BFirm LL40311,856,9511,7219999850.3
28Geobacillus thermodenitrificans NG80-2BFirm BB1865523,608,0123,4451010108751.1
29Bacillus selenitireducens MLS10BFirm BB1337613,592,4873,2558776851.3
30Exiguobacterium sp. AT1bBFirm BB2775912,999,8953,0209996851.5
31Exiguobacterium sibiricum 255-15BFirm BB1064933,040,7863,0159996952.3
32Desulfitobacterium hafniense DCB-2BFirm CC20515,279,1344,8835557452.5
33Desulfitobacterium hafniense Y51BFirm CC1663915,727,5345,0606665952.6
34Brevibacillus brevis NBRC 100599BFirm BP2914716,296,4365,94914151512752.7
35Lactobacillus rhamnosus GGBFirm LL3219513,010,1112,9445555753.3
36Lactobacillus rhamnosus GGBFirm LL4063713,005,0512,8345555953.3
37Lactobacillus rhamnosus Lc 705BFirm LL3219723,033,1062,9925556153.3
38Lactobacillus casei ATCC 334BFirm LL40222,924,3252,7715555953.4
39Bacillus amyloliquefaciens FZB42BFirm BB1340313,918,5893,693109108953.5
40Lactobacillus casei BL23BFirm LL3035913,079,1963,0445556053.7
41Bacillus licheniformis ATCC 14580BFirm BB1308214,222,6454,1967777253.8
42Lactobacillus brevis ATCC 367BFirm LL40432,340,2282,2185556553.9
43Coprothermobacter proteolyticus DSM 5265BFirm CT3072911,424,9121,4822224755.2
44Bacillus clausii KSM-K16BFirm BB1329114,303,8714,1088777555.3
45Lactobacillus plantarum JDM1BFirm LL3296913,197,7592,948N/AN/AN/AN/A55.3
46Lactobacillus plantarum WCFS1BFirm LL35643,348,6253,1016557255.6
47Clostridiales genomosp. BVAB3 str. UPII9-5BFirm CC4255511,810,2481,5262224555.8
48Bacillus halodurans C-125BFirm BB23514,202,3524,0669887856.3
49Bacillus subtilis subsp. subtilis str. 168BFirm BB7614,214,6304,1061010108656.5
50Streptococcus sanguinis SK36BFirm LS1394212,388,4352,2704446156.6
51Geobacillus sp. WCH70BFirm BB2080533,508,8043,168810109257.2
52Desulfotomaculum reducens MI-1BFirm CC1342413,608,1043,27610887057.7
53Carboxydothermus hydrogenoformans Z-2901BFirm CC25312,401,5202,6204445058.0
54Streptococcus equi subsp. zooepidemicus MGCS10565BFirm LS3078112,024,1711,8935555758.2
55Anoxybacillus flavithermus WK1BFirm BB2824512,846,7462,8328887758.2
56Desulfotomaculum acetoxidans DSM 771BFirm CC2794714,545,6244,068910106858.5
57Streptococcus equi subsp. zooepidemicusBFirm LS3076712,149,8681,9605555758.5
58Eubacterium rectale ATCC 33656BFirm CC2907113,449,6853,6265556058.5
59Streptococcus suis P1/7BFirm LS35212,007,4911,9084445658.7
60Bacillus pumilus SAFR-032BFirm BB2039113,704,4653,6817777058.7
61Streptococcus equi subsp. equi 4047BFirm LS3076512,253,7932,1376666658.7
62Lactobacillus sakei subsp. sakei 23KBFirm LL1343511,884,6611,8857776358.7
63Streptococcus suis 05ZYH33BFirm LS1715312,096,3092,1864445658.9
64Streptococcus suis 98HAH33BFirm LS1715512,095,6982,1894445658.9
65Streptococcus suis SC84BFirm LS3223912,095,8981,9854445658.9
66Streptococcus suis BM407BFirm LS3223722,170,8082,0584445659.0
67Streptococcus gordonii str. Challis substr. CH1BFirm LS6612,196,6622,0514445959.5
68Streptococcus mitis B6BFirm LS1630212,146,6112,0184446160.0
69Streptococcus pneumoniae TCH8431/19ABFirm LS3465912,088,7722,2754445860.2
70Streptococcus pneumoniae Taiwan19F-14BFirm LS2803712,112,1482,0444445860.2
71Streptococcus pneumoniae P1031BFirm LS2804112,111,8822,0734445860.3
72Streptococcus pneumoniae JJABFirm LS2803912,120,2342,1234445960.3
73Streptococcus pneumoniae 70585BFirm LS2804312,184,6822,2024445860.3
74Streptococcus pneumoniae R6BFirm LS27812,038,6152,0434445860.3
75Streptococcus pneumoniae D39BFirm LS1637412,046,1151,9144445860.3
76Streptococcus pneumoniae TIGR4BFirm LS27712,160,8422,1254445860.3
77Streptococcus pneumoniae G54BFirm LS2904712,078,9532,1154445860.3
78Streptococcus pneumoniae Hungary19A-6BFirm LS2803512,245,6152,1554445860.4
79Streptococcus dysgalactiae subsp. equisimilis GGS_124BFirm LS2784912,106,3402,1025555760.4
80Streptococcus pneumoniae ATCC 700669BFirm LS3123312,221,3152,1354445860.5
81Streptococcus pneumoniae CGSP14BFirm LS2917912,209,1982,2064445860.5
82Streptococcus thermophilus LMG 18311BFirm LS1316211,796,8461,8896666760.9
83Streptococcus thermophilus CNRZ1066BFirm LS1316311,796,2261,9156666760.9
84Streptococcus thermophilus LMD-9BFirm LS1377331,864,1781,7166666760.9
85Clostridium thermocellum ATCC 27405BFirm CC31413,843,3013,1914445661.0
86Lactobacillus reuteri JCM 1112BFirm LL1901112,039,4141,8206666561.1
87Leuconostoc citreum KM20BFirm LL1606251,896,6141,8234447061.1
88Lactobacillus reuteri DSM 20016BFirm LL1576611,999,6181,9006666861.1
89Streptococcus pyogenes MGAS2096BFirm LS1636511,860,3551,8986666761.3
90Streptococcus pyogenes MGAS10394BFirm LS1246911,899,8771,8866666761.3
91Streptococcus pyogenes str. ManfredoBFirm LS27011,841,2711,8196666661.4
92Veillonella parvula DSM 2008BFirm CC2109112,132,1421,8444444861.4
93Streptococcus pyogenes MGAS315BFirm LS31111,900,5211,8656666761.4
94Streptococcus pyogenes NZ131BFirm LS2070711,815,7851,7036666661.4
95Streptococcus pyogenes MGAS8232BFirm LS28611,895,0171,8456666761.4
96Streptococcus pyogenes SSI-1BFirm LS30111,894,2751,8615555761.4
97Streptococcus pyogenes MGAS9429BFirm LS1636311,836,4671,8776666761.5
98Streptococcus pyogenes MGAS5005BFirm LS1388811,838,5541,8656666761.5
99Streptococcus pyogenes M1 GASBFirm LS26911,852,4411,6966666061.5
100Streptococcus pyogenes MGAS10270BFirm LS1636411,928,2521,9876666761.6
101Streptococcus pyogenes MGAS6180BFirm LS1388711,897,5731,8946666761.7
102Streptococcus pyogenes MGAS10750BFirm LS1636611,937,1111,9796666761.7
103Listeria monocytogenes HCC23BFirm BL2940912,976,2122,9746666761.8
104Bacillus megaterium DSM319BFirm BB4242515,097,4475,12411111111561.9
105Listeria monocytogenes Clip80459BFirm BL3220712,912,6902,7906666761.9
106Listeria monocytogenes str. 4b F2365BFirm BL8512,905,1872,8216666762.0
107Listeria monocytogenes EGD-eBFirm BL27612,944,5282,8556666762.0
108Listeria monocytogenes 08-5923BFirm BL3636312,999,0542,9665555862.0
109Bacillus megaterium QM B1551BFirm BB3016585,523,1925,62913121213962.1
110Listeria monocytogenesBFirm BL3636123,109,3423,0885555862.1
111Leuconostoc kimchii IMSNU 11154BFirm LL4083762,101,7872,1304446862.1
112Oenococcus oeni PSU-1BFirm LO31711,780,5171,6912224362.1
113Halothermothrix orenii H 168BFirm CH1637712,578,1462,3423445662.1
114Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293BFirm LL31522,075,7632,0054447162.3
115Streptococcus gallolyticus UCN34BFirm LS3472912,350,9112,2616667162.4
116Thermoanaerobacter tengcongensis MB4BFirm CT24912,689,4452,5884445562.4
117Eubacterium eligens ATCC 27750BFirm CC2907332,831,3892,7655554862.4
118Clostridium cellulolyticum H10BFirm CC1741914,068,7243,3908886362.6
119Listeria innocua Clip11262BFirm BL8623,093,1133,0616666662.6
120Enterococcus faecalis V583BFirm LE7043,359,9743,2654446862.6
121Listeria seeligeri serovar 1/2b str. SLCC3954BFirm BL4112312,797,6362,7226666762.6
122Pediococcus pentosaceus ATCC 25745BFirm LL39811,832,3871,7555555562.6
123Lysinibacillus sphaericus C3-41BFirm BB1961924,817,4634,7711110108562.9
124Lactobacillus helveticus DPC 4571BFirm LL1781112,080,9311,6104446162.9
125Lactobacillus crispatus ST1BFirm LL4681312,043,1612,0244446463.1
126Streptococcus mutans UA159BFirm LS33312,030,9211,9605556563.2
127Alkaliphilus metalliredigens QYMFBFirm CC1300614,929,5664,62511101010663.2
128Streptococcus uberis 0140JBFirm LS35311,852,3521,8255555963.4
129Macrococcus caseolyticus JCSC5402BFirm BM2020992,219,7372,0595444863.4
130Listeria welshimeri serovar 6b str. SLCC5334BFirm BL1344312,814,1302,7806666663.7
131Natranaerobius thermophilus JW/NM-WN-LFBFirm CN2020733,191,4532,9064445163.7
132Alkaliphilus oremlandii OhILAsBFirm CC1608313,123,5582,8369888663.7
133Bacillus cytotoxicus NVH 391-98BFirm BB1362424,094,1593,84413131310664.1
134Lactococcus lactis subsp. cremoris SK11BFirm LS40162,598,3482,5047666264.2
135Lactococcus lactis subsp. cremoris MG1363BFirm LS1879712,529,4782,5167666464.2
136Oceanobacillus iheyensis HTE831BFirm BB28413,630,5283,4968776964.3
137Streptococcus agalactiae 2603V/RBFirm LS33012,160,2672,1247778064.3
138Anaerococcus prevotii DSM 20548BFirm CC2953321,998,6331,8064444864.4
139Streptococcus agalactiae NEM316BFirm LS33412,211,4852,1347778064.4
140Streptococcus agalactiae A909BFirm LS32612,127,8391,9967778064.4
141Bacillus cereus AH187BFirm BB1771555,599,8575,79614141410464.5
142Bacillus cereus ATCC 10987BFirm BB7425,432,6525,8441212129864.5
143Bacillus cereus Q1BFirm BB1622035,506,2075,5021313139464.5
144Bacillus thuringiensis str. Al HakamBFirm BB1825525,313,0304,79814141410464.6
145Bacillus anthracis str. AmesBFirm BB30915,227,2935,3111111119564.6
146Bacillus anthracis str. SterneBFirm BB1087815,228,6635,2871111119564.6
147Clostridium phytofermentans ISDgBFirm CC1618414,847,5943,9028886164.6
148Bacillus cereus 03BB102BFirm BB3130725,449,3085,62114141410564.7
149Lactococcus lactis subsp. lactis Il1403BFirm LS7212,365,5892,2667666264.7
150Bacillus cereus AH820BFirm BB1771145,588,8345,8101212129664.7
151Bacillus cereus B4264BFirm BB1773115,419,0365,40814141410864.7
152Bacillus cereus ATCC 14579BFirm BB38425,427,0835,25513131310864.7
153Lactobacillus gasseri ATCC 33323BFirm LL8411,894,3601,7556667864.7
154Bacillus anthracis str. CDC 684BFirm BB3132935,506,7635,9021111119664.8
155Bacillus anthracis str. 'Ames Ancestor'BFirm BB1078435,503,9265,6171111119564.8
156Bacillus anthracis str. A0248BFirm BB3354335,503,9265,2911111119564.8
157Anaerocellum thermophilum DSM 6725BFirm CC2940732,931,6622,6663334764.8
158Bacillus thuringiensis BMB171BFirm BB4363125,643,0515,34914141410464.8
159Bacillus cereus E33LBFirm BB1246865,843,2355,6411313139664.9
160Bacillus cereus G9842BFirm BB1773335,736,8235,8571313139865.0
161Lactococcus lactis subsp. lactis KF147BFirm LS4111522,635,6542,5757666865.1
162Lactobacillus acidophilus NCFMBFirm LL8211,993,5611,8624436165.3
163Staphylococcus carnosus subsp. carnosus TM300BFirm BS3481112,566,4242,4625556065.4
164Lactobacillus johnsonii NCC 533BFirm LL963811,992,6761,8216667965.4
165Thermoanaerobacter sp. X514BFirm CT1639412,457,2592,3490445465.5
166Thermoanaerobacter pseudethanolicus ATCC 33223BFirm CT1390112,362,8162,2432445665.5
167Lactobacillus johnsonii FI9785BFirm LL3657531,785,1161,7374445565.6
168Thermoanaerobacter mathranii subsp. mathranii str. A3BFirm CT3332912,306,0922,1594445965.7
169Thermoanaerobacter italicus Ab9BFirm CT3315712,451,0612,2703445465.9
170Staphylococcus lugdunensis HKU09-01BFirm BS4239512,658,3662,4907666166.1
171Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305BFirm BS1559632,577,8992,5147666066.8
172Lactobacillus salivarius UCC118BFirm LL1328042,133,9772,0177777867.0
173Bacillus anthracis CI363094290,595337000067.0
174Staphylococcus aureus subsp. aureus ED133BFirm BS4127712,832,4782,6536555967.1
175Staphylococcus aureus subsp. aureus JH9BFirm BS1575722,937,1292,7267665967.1
176Staphylococcus aureus subsp. aureus JH1BFirm BS1575822,936,9362,7807666067.1
177Staphylococcus aureus subsp. aureus ST398BFirm BS2942742,885,3672,7107666067.1
178Staphylococcus aureus 04-02981BFirm BS3480912,821,4522,6507566267.1
179Staphylococcus aureus subsp. aureus str. NewmanBFirm BS1880112,878,8972,6146556067.1
180Staphylococcus aureus subsp. aureus Mu3BFirm BS1850912,880,1682,6996556067.1
181Staphylococcus aureus subsp. aureus NCTC 8325BFirm BS23712,821,3612,8926556067.1
182Staphylococcus aureus subsp. aureus Mu50BFirm BS26322,903,6362,7336556067.2
183Staphylococcus aureus subsp. aureus MW2BFirm BS30612,820,4622,6327666067.2
184Staphylococcus aureus subsp. aureus MSSA476BFirm BS26622,820,4542,6437665967.2
185Staphylococcus aureus subsp. aureus COLBFirm BS23822,813,8622,6767665367.2
186Staphylococcus aureus ED98BFirm BS3954742,847,5422,6896556167.2
187Staphylococcus aureus subsp. aureus MRSA252BFirm BS26512,902,6192,7446556067.2
188Staphylococcus aureus subsp. aureus N315BFirm BS26422,839,4692,6246556267.2
189Staphylococcus aureus RF122BFirm BS6312,742,5312,5896556067.2
190Staphylococcus haemolyticus JCSC1435BFirm BS1250842,697,8612,6946556067.2
191Staphylococcus aureus subsp. aureus USA300_TCH1516BFirm BS1948932,903,0812,6896556067.3
192Staphylococcus aureus subsp. aureus USA300_FPR3757BFirm BS1631342,917,4692,6046555367.3
193Staphylococcus aureus subsp. aureus TW2036647332,59633000067.5
194Staphylococcus epidermidis RP62ABFirm BS6422,643,8402,5267666167.9
195Finegoldia magna ATCC 29328BFirm CC1898121,986,7401,8134444867.9
196Staphylococcus epidermidis ATCC 12228BFirm BS27972,564,6152,4856556067.9
197Clostridium kluyveri DSM 555BFirm CC1906524,023,8003,9136776168.0
198Clostridium kluyveri NBRC 12016BFirm CC3327123,955,3033,5236776168.0
199Acholeplasma laidlawii PG-8ABFirm MA1925911,496,9921,3802223668.1
200Mycoplasma genitalium G37BFirm MM971580,0764761113668.3
201Clostridium acetobutylicum ATCC 824BFirm CC7724,132,8803,8481111117369.1
202Mycoplasma arthritidis 158L3-1BFirm MM14221820,4536311113369.3
203Clostridium beijerinckii NCIMB 8052BFirm CC1263716,000,6325,0201514149470.1
204Mycoplasma agalactiae PG2BFirm MM160951877,4387512223470.3
205Clostridium difficile 630BFirm CC7824,298,1333,7871011118770.9
206Clostridium novyi NTBFirm CC1682012,547,7202,3251010108171.1
207Clostridium tetani E88BFirm CC8122,873,3332,4326665471.4
208Mycoplasma hyopneumoniae 232BFirm MM131201892,7586911113071.4
209Clostridium perfringens str. 13BFirm CC7923,085,7402,723101099671.5
210Mycoplasma synoviae 53BFirm MM106761799,4766723223471.5
211Mycoplasma hyopneumoniae 7448BFirm MM106391920,0796631113071.5
212Clostridium perfringens ATCC 13124BFirm CC30413,256,6832,8768889371.6
213Clostridium botulinum F str. LangelandBFirm CC1951924,012,9183,6599998171.7
214Clostridium botulinum F str. 230613BFirm CC4757524,010,6143,5279997171.7
215Clostridium botulinum B1 str. OkraBFirm CC2850524,107,0133,8529998271.8
216Clostridium perfringens SM101BFirm CC1252142,960,0882,6311010109571.8
217Clostridium botulinum A str. ATCC 19397BFirm CC1951713,863,4503,5528888171.8
218Clostridium botulinum A2 str. KyotoBFirm CC2985914,155,2783,8789998171.8
219Clostridium botulinum A str. HallBFirm CC1952113,760,5603,4048888171.8
220Clostridium botulinum A3 str. Loch MareeBFirm CC2850724,259,6913,9849998171.9
221Clostridium botulinum Ba4 str. 657BFirm CC2907734,257,7694,0979998272.0
222Onion yellows phytoplasma OY-MBFirm MA96151860,6317542223272.3
223Clostridium botulinum B str. Eklund 17BBFirm CC2885723,847,9693,5271211117772.5
224Candidatus Phytoplasma australienseBTMA294691879,9598392223572.6
225Clostridium botulinum E3 str. Alaska E43BFirm CC2885513,659,6443,2561211117972.6
226Mesoplasma florum L1BFirm ME106501793,2246832222973.0
227Mycoplasma crocodyli MP145BTMM290211934,3796892223473.0
228Mycoplasma pulmonis UAB CTIPBFirm MM1001963,8797822112973.4
229Mycoplasma penetrans HF-2BFirm MM17611,358,6331,0371113074.3
230Ureaplasma parvum serovar 3 str. ATCC 700970BFirm MM1011751,7196112223074.5
231Ureaplasma parvum serovar 3 str. ATCC 27815BFirm MM190871751,6796092223074.5
232Mycoplasma mobile 163KBFirm MM106971777,0796351112875.1
233Mycoplasma mycoides subsp. mycoides SC str. PG1BFirm MM1061611,211,7031,0162223076.0
234Mycoplasma mycoides subsp. capri str. GM12BTMM1924511,089,2028322223076.1
235Mycoplasma capricolum subsp. capricolum ATCC 27343BFirm MM1620811,010,0238122223076.2

Acknowledgements:

This research is funded by:

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