Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
235 projects found  

Available Tables
RowOrganismTax GroupNCBI
Project ID
RepliconsTotal Size (bp)Number of
genes
5S rRNA
count
16S rRNA
count
23S rRNA
count
tRNA
count
% AT
1Macrococcus caseolyticus JCSC5402BFirm BM2020992,219,7372,0595444863.4
2Bacillus megaterium QM B1551BFirm BB3016585,523,1925,62913121213962.1
3Staphylococcus epidermidis ATCC 12228BFirm BS27972,564,6152,4856556067.9
4Lactococcus lactis subsp. cremoris SK11BFirm LS40162,598,3482,5047666264.2
5Bacillus cereus E33LBFirm BB1246865,843,2355,6411313139664.9
6Leuconostoc kimchii IMSNU 11154BFirm LL4083762,101,7872,1304446862.1
7Leuconostoc citreum KM20BFirm LL1606251,896,6141,8234447061.1
8Bacillus cereus AH187BFirm BB1771555,599,8575,79614141410464.5
9Enterococcus faecalis V583BFirm LE7043,359,9743,2654446862.6
10Lactobacillus plantarum WCFS1BFirm LL35643,348,6253,1016557255.6
11Staphylococcus haemolyticus JCSC1435BFirm BS1250842,697,8612,6946556067.2
12Clostridium perfringens SM101BFirm CC1252142,960,0882,6311010109571.8
13Lactobacillus salivarius UCC118BFirm LL1328042,133,9772,0177777867.0
14Staphylococcus aureus subsp. aureus USA300_FPR3757BFirm BS1631342,917,4692,6046555367.3
15Bacillus cereus AH820BFirm BB1771145,588,8345,8101212129664.7
16Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446BFirm BA2940543,205,6863,0846666438.1
17Staphylococcus aureus subsp. aureus ST398BFirm BS2942742,885,3672,7107666067.1
18Bacillus anthracis CI363094290,595337000067.0
19Staphylococcus aureus ED98BFirm BS3954742,847,5422,6896556167.2
20Lactobacillus salivarius CECT 5713435354N/AN/AN/AN/AN/AN/AN/A
21Lactobacillus brevis ATCC 367BFirm LL40432,340,2282,2185556553.9
22Exiguobacterium sibiricum 255-15BFirm BB1064933,040,7863,0159996952.3
23Bacillus anthracis str. 'Ames Ancestor'BFirm BB1078435,503,9265,6171111119564.8
24Streptococcus thermophilus LMD-9BFirm LS1377331,864,1781,7166666760.9
25Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305BFirm BS1559632,577,8992,5147666066.8
26Bacillus cereus Q1BFirm BB1622035,506,2075,5021313139464.5
27Bacillus cereus G9842BFirm BB1773335,736,8235,8571313139865.0
28Staphylococcus aureus subsp. aureus USA300_TCH1516BFirm BS1948932,903,0812,6896556067.3
29Natranaerobius thermophilus JW/NM-WN-LFBFirm CN2020733,191,4532,9064445163.7
30Geobacillus sp. WCH70BFirm BB2080533,508,8043,168810109257.2
31Eubacterium eligens ATCC 27750BFirm CC2907332,831,3892,7655554862.4
32Clostridium botulinum Ba4 str. 657BFirm CC2907734,257,7694,0979998272.0
33Anaerocellum thermophilum DSM 6725BFirm CC2940732,931,6622,6663334764.8
34Bacillus anthracis str. CDC 684BFirm BB3132935,506,7635,9021111119664.8
35Bacillus anthracis str. A0248BFirm BB3354335,503,9265,2911111119564.8
36Lactobacillus johnsonii FI9785BFirm LL3657531,785,1161,7374445565.6
37Staphylococcus aureus subsp. aureus TW2036647332,59633000067.5
38Staphylococcus epidermidis RP62ABFirm BS6422,643,8402,5267666167.9
39Bacillus cereus ATCC 10987BFirm BB7425,432,6525,8441212129864.5
40Clostridium acetobutylicum ATCC 824BFirm CC7724,132,8803,8481111117369.1
41Clostridium difficile 630BFirm CC7824,298,1333,7871011118770.9
42Clostridium perfringens str. 13BFirm CC7923,085,7402,723101099671.5
43Clostridium tetani E88BFirm CC8122,873,3332,4326665471.4
44Listeria innocua Clip11262BFirm BL8623,093,1133,0616666662.6
45Staphylococcus aureus subsp. aureus COLBFirm BS23822,813,8622,6767665367.2
46Staphylococcus aureus subsp. aureus Mu50BFirm BS26322,903,6362,7336556067.2
47Staphylococcus aureus subsp. aureus N315BFirm BS26422,839,4692,6246556267.2
48Staphylococcus aureus subsp. aureus MSSA476BFirm BS26622,820,4542,6437665967.2
49Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293BFirm LL31522,075,7632,0054447162.3
50Bacillus cereus ATCC 14579BFirm BB38425,427,0835,25513131310864.7
51Lactobacillus casei ATCC 334BFirm LL40222,924,3252,7715555953.4
52Ammonifex degensii KC4BFirm CT1239022,157,0672,0802224840.5
53Geobacillus kaustophilus HTA426BFirm BB1323323,592,6663,5409998748.0
54Bacillus cytotoxicus NVH 391-98BFirm BB1362424,094,1593,84413131310664.1
55Staphylococcus aureus subsp. aureus JH9BFirm BS1575722,937,1292,7267665967.1
56Staphylococcus aureus subsp. aureus JH1BFirm BS1575822,936,9362,7807666067.1
57Bacillus thuringiensis str. Al HakamBFirm BB1825525,313,0304,79814141410464.6
58Geobacillus thermodenitrificans NG80-2BFirm BB1865523,608,0123,4451010108751.1
59Finegoldia magna ATCC 29328BFirm CC1898121,986,7401,8134444867.9
60Clostridium kluyveri DSM 555BFirm CC1906524,023,8003,9136776168.0
61Clostridium botulinum F str. LangelandBFirm CC1951924,012,9183,6599998171.7
62Lysinibacillus sphaericus C3-41BFirm BB1961924,817,4634,7711110108562.9
63Clostridium botulinum B1 str. OkraBFirm CC2850524,107,0133,8529998271.8
64Clostridium botulinum A3 str. Loch MareeBFirm CC2850724,259,6913,9849998171.9
65Clostridium botulinum B str. Eklund 17BBFirm CC2885723,847,9693,5271211117772.5
66Anaerococcus prevotii DSM 20548BFirm CC2953321,998,6331,8064444864.4
67Geobacillus sp. Y412MC61BFirm BB3053723,667,9013,4469888847.7
68Bacillus cereus 03BB102BFirm BB3130725,449,3085,62114141410564.7
69Lactobacillus rhamnosus Lc 705BFirm LL3219723,033,1062,9925556153.3
70Streptococcus suis BM407BFirm LS3223722,170,8082,0584445659.0
71Clostridium kluyveri NBRC 12016BFirm CC3327123,955,3033,5236776168.0
72Listeria monocytogenesBFirm BL3636123,109,3423,0885555862.1
73Lactococcus lactis subsp. lactis KF147BFirm LS4111522,635,6542,5757666865.1
74Bacillus thuringiensis BMB171BFirm BB4363125,643,0515,34914141410464.8
75Clostridium botulinum F str. 230613BFirm CC4757524,010,6143,5279997171.7
76Staphylococcus aureus RF122BFirm BS6312,742,5312,5896556067.2
77Streptococcus gordonii str. Challis substr. CH1BFirm LS6612,196,6622,0514445959.5
78Lactococcus lactis subsp. lactis Il1403BFirm LS7212,365,5892,2667666264.7
79Bacillus subtilis subsp. subtilis str. 168BFirm BB7614,214,6304,1061010108656.5
80Lactobacillus acidophilus NCFMBFirm LL8211,993,5611,8624436165.3
81Lactobacillus gasseri ATCC 33323BFirm LL8411,894,3601,7556667864.7
82Listeria monocytogenes str. 4b F2365BFirm BL8512,905,1872,8216666762.0
83Mycoplasma genitalium G37BFirm MM971580,0764761113668.3
84Mycoplasma pulmonis UAB CTIPBFirm MM1001963,8797822112973.4
85Ureaplasma parvum serovar 3 str. ATCC 700970BFirm MM1011751,7196112223074.5
86Mycoplasma penetrans HF-2BFirm MM17611,358,6331,0371113074.3
87Desulfitobacterium hafniense DCB-2BFirm CC20515,279,1344,8835557452.5
88Bacillus halodurans C-125BFirm BB23514,202,3524,0669887856.3
89Staphylococcus aureus subsp. aureus NCTC 8325BFirm BS23712,821,3612,8926556067.1
90Thermoanaerobacter tengcongensis MB4BFirm CT24912,689,4452,5884445562.4
91Carboxydothermus hydrogenoformans Z-2901BFirm CC25312,401,5202,6204445058.0
92Staphylococcus aureus subsp. aureus MRSA252BFirm BS26512,902,6192,7446556067.2
93Streptococcus pyogenes M1 GASBFirm LS26911,852,4411,6966666061.5
94Streptococcus pyogenes str. ManfredoBFirm LS27011,841,2711,8196666661.4
95Listeria monocytogenes EGD-eBFirm BL27612,944,5282,8556666762.0
96Streptococcus pneumoniae TIGR4BFirm LS27712,160,8422,1254445860.3
97Streptococcus pneumoniae R6BFirm LS27812,038,6152,0434445860.3
98Oceanobacillus iheyensis HTE831BFirm BB28413,630,5283,4968776964.3
99Streptococcus pyogenes MGAS8232BFirm LS28611,895,0171,8456666761.4
100Streptococcus pyogenes SSI-1BFirm LS30111,894,2751,8615555761.4
101Clostridium perfringens ATCC 13124BFirm CC30413,256,6832,8768889371.6
102Staphylococcus aureus subsp. aureus MW2BFirm BS30612,820,4622,6327666067.2
103Bacillus anthracis str. AmesBFirm BB30915,227,2935,3111111119564.6
104Streptococcus pyogenes MGAS315BFirm LS31111,900,5211,8656666761.4
105Clostridium thermocellum ATCC 27405BFirm CC31413,843,3013,1914445661.0
106Oenococcus oeni PSU-1BFirm LO31711,780,5171,6912224362.1
107Streptococcus agalactiae A909BFirm LS32612,127,8391,9967778064.4
108Streptococcus agalactiae 2603V/RBFirm LS33012,160,2672,1247778064.3
109Streptococcus mutans UA159BFirm LS33312,030,9211,9605556563.2
110Streptococcus agalactiae NEM316BFirm LS33412,211,4852,1347778064.4
111Streptococcus suis P1/7BFirm LS35212,007,4911,9084445658.7
112Streptococcus uberis 0140JBFirm LS35311,852,3521,8255555963.4
113Pediococcus pentosaceus ATCC 25745BFirm LL39811,832,3871,7555555562.6
114Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365BFirm LL40311,856,9511,7219999850.3
115Mycoplasma arthritidis 158L3-1BFirm MM14221820,4536311113369.3
116Onion yellows phytoplasma OY-MBFirm MA96151860,6317542223272.3
117Lactobacillus johnsonii NCC 533BFirm LL963811,992,6761,8216667965.4
118Mycoplasma mycoides subsp. mycoides SC str. PG1BFirm MM1061611,211,7031,0162223076.0
119Mycoplasma hyopneumoniae 7448BFirm MM106391920,0796631113071.5
120Moorella thermoacetica ATCC 39073BFirm CT1064812,628,7842,4631115144.2
121Mesoplasma florum L1BFirm ME106501793,2246832222973.0
122Mycoplasma synoviae 53BFirm MM106761799,4766723223471.5
123Mycoplasma mobile 163KBFirm MM106971777,0796351112875.1
124Bacillus anthracis str. SterneBFirm BB1087815,228,6635,2871111119564.6
125Streptococcus pyogenes MGAS10394BFirm LS1246911,899,8771,8866666761.3
126Clostridium beijerinckii NCIMB 8052BFirm CC1263716,000,6325,0201514149470.1
127Symbiobacterium thermophilum IAM 14863BFirm LS1299413,566,1353,3377669831.3
128Alkaliphilus metalliredigens QYMFBFirm CC1300614,929,5664,62511101010663.2
129Bacillus licheniformis ATCC 14580BFirm BB1308214,222,6454,1967777253.8
130Mycoplasma hyopneumoniae 232BFirm MM131201892,7586911113071.4
131Streptococcus thermophilus LMG 18311BFirm LS1316211,796,8461,8896666760.9
132Streptococcus thermophilus CNRZ1066BFirm LS1316311,796,2261,9156666760.9
133Bacillus clausii KSM-K16BFirm BB1329114,303,8714,1088777555.3
134Bacillus selenitireducens MLS10BFirm BB1337613,592,4873,2558776851.3
135Bacillus amyloliquefaciens FZB42BFirm BB1340313,918,5893,693109108953.5
136Desulfotomaculum reducens MI-1BFirm CC1342413,608,1043,27610887057.7
137Heliobacterium modesticaldum Ice1BFirm CC1342713,075,4073,00010101010943.0
138Lactobacillus sakei subsp. sakei 23KBFirm LL1343511,884,6611,8857776358.7
139Listeria welshimeri serovar 6b str. SLCC5334BFirm BL1344312,814,1302,7806666663.7
140Clostridium ljungdahlii ATCC 49587134921N/AN/AN/AN/AN/AN/AN/A
141Streptococcus pyogenes MGAS6180BFirm LS1388711,897,5731,8946666761.7
142Streptococcus pyogenes MGAS5005BFirm LS1388811,838,5541,8656666761.5
143Thermoanaerobacter pseudethanolicus ATCC 33223BFirm CT1390112,362,8162,2432445665.5
144Streptococcus sanguinis SK36BFirm LS1394212,388,4352,2704446156.6
145Lactobacillus reuteri DSM 20016BFirm LL1576611,999,6181,9006666861.1
146Alkaliphilus oremlandii OhILAsBFirm CC1608313,123,5582,8369888663.7
147Mycoplasma agalactiae PG2BFirm MM160951877,4387512223470.3
148Clostridium phytofermentans ISDgBFirm CC1618414,847,5943,9028886164.6
149Mycoplasma capricolum subsp. capricolum ATCC 27343BFirm MM1620811,010,0238122223076.2
150Streptococcus mitis B6BFirm LS1630212,146,6112,0184446160.0
151Streptococcus pyogenes MGAS9429BFirm LS1636311,836,4671,8776666761.5
152Streptococcus pyogenes MGAS10270BFirm LS1636411,928,2521,9876666761.6
153Streptococcus pyogenes MGAS2096BFirm LS1636511,860,3551,8986666761.3
154Streptococcus pyogenes MGAS10750BFirm LS1636611,937,1111,9796666761.7
155Streptococcus pneumoniae D39BFirm LS1637412,046,1151,9144445860.3
156Halothermothrix orenii H 168BFirm CH1637712,578,1462,3423445662.1
157Thermoanaerobacter sp. X514BFirm CT1639412,457,2592,3490445465.5
158Desulfitobacterium hafniense Y51BFirm CC1663915,727,5345,0606665952.6
159Clostridium novyi NTBFirm CC1682012,547,7202,3251010108171.1
160Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842BFirm LL1687111,864,9982,0969999550.3
161Streptococcus suis 05ZYH33BFirm LS1715312,096,3092,1864445658.9
162Streptococcus suis 98HAH33BFirm LS1715512,095,6982,1894445658.9
163Clostridium cellulolyticum H10BFirm CC1741914,068,7243,3908886362.6
164Bacillus cereus B4264BFirm BB1773115,419,0365,40814141410864.7
165Lactobacillus helveticus DPC 4571BFirm LL1781112,080,9311,6104446162.9
166Staphylococcus aureus subsp. aureus Mu3BFirm BS1850912,880,1682,6996556067.1
167Streptococcus suis GZ1187371N/AN/AN/AN/AN/AN/AN/A
168Lactococcus lactis subsp. cremoris MG1363BFirm LS1879712,529,4782,5167666464.2
169Staphylococcus aureus subsp. aureus str. NewmanBFirm BS1880112,878,8972,6146556067.1
170Lactobacillus fermentum IFO 3956BFirm LL1897912,098,6851,8435555748.5
171Lactobacillus reuteri JCM 1112BFirm LL1901112,039,4141,8206666561.1
172Pelotomaculum thermopropionicum SIBFirm CC1902313,025,3752,9202225147.0
173Ureaplasma parvum serovar 3 str. ATCC 27815BFirm MM190871751,6796092223074.5
174Mycoplasma mycoides subsp. capri str. GM12BTMM1924511,089,2028322223076.1
175Acholeplasma laidlawii PG-8ABFirm MA1925911,496,9921,3802223668.1
176Clostridium botulinum A str. ATCC 19397BFirm CC1951713,863,4503,5528888171.8
177Clostridium botulinum A str. HallBFirm CC1952113,760,5603,4048888171.8
178Bacillus pumilus SAFR-032BFirm BB2039113,704,4653,6817777058.7
179Paenibacillus sp. JDR-2BFirm BP2039917,184,9306,2131112128849.7
180Streptococcus pyogenes NZ131BFirm LS2070711,815,7851,7036666661.4
181Candidatus Desulforudis audaxviator MP104CBFirm CC2104712,349,4762,1572224539.1
182Veillonella parvula DSM 2008BFirm CC2109112,132,1421,8444444861.4
183Exiguobacterium sp. AT1bBFirm BB2775912,999,8953,0209996851.5
184Geobacillus sp. Y412MC10BFirm BB2777717,121,6656,2388887348.8
185Streptococcus dysgalactiae subsp. equisimilis GGS_124BFirm LS2784912,106,3402,1025555760.4
186Desulfotomaculum acetoxidans DSM 771BFirm CC2794714,545,6244,068910106858.5
187Streptococcus pneumoniae Hungary19A-6BFirm LS2803512,245,6152,1554445860.4
188Streptococcus pneumoniae Taiwan19F-14BFirm LS2803712,112,1482,0444445860.2
189Streptococcus pneumoniae JJABFirm LS2803912,120,2342,1234445960.3
190Streptococcus pneumoniae P1031BFirm LS2804112,111,8822,0734445860.3
191Streptococcus pneumoniae 70585BFirm LS2804312,184,6822,2024445860.3
192Anoxybacillus flavithermus WK1BFirm BB2824512,846,7462,8328887758.2
193Lactobacillus casei str. Zhang285371N/AN/AN/AN/AN/AN/AN/A
194Clostridium botulinum E3 str. Alaska E43BFirm CC2885513,659,6443,2561211117972.6
195Streptococcus mutans NN2025289971N/AN/AN/AN/AN/AN/AN/A
196Mycoplasma crocodyli MP145BTMM290211934,3796892223473.0
197Streptococcus pneumoniae G54BFirm LS2904712,078,9532,1154445860.3
198Eubacterium rectale ATCC 33656BFirm CC2907113,449,6853,6265556058.5
199Brevibacillus brevis NBRC 100599BFirm BP2914716,296,4365,94914151512752.7
200Streptococcus pneumoniae CGSP14BFirm LS2917912,209,1982,2064445860.5
201Listeria monocytogenes HCC23BFirm BL2940912,976,2122,9746666761.8
202Candidatus Phytoplasma australienseBTMA294691879,9598392223572.6
203Clostridium botulinum A2 str. KyotoBFirm CC2985914,155,2783,8789998171.8
204Lactobacillus casei BL23BFirm LL3035913,079,1963,0445556053.7
205Coprothermobacter proteolyticus DSM 5265BFirm CT3072911,424,9121,4822224755.2
206Streptococcus equi subsp. equi 4047BFirm LS3076512,253,7932,1376666658.7
207Streptococcus equi subsp. zooepidemicusBFirm LS3076712,149,8681,9605555758.5
208Streptococcus equi subsp. zooepidemicus MGCS10565BFirm LS3078112,024,1711,8935555758.2
209Streptococcus pneumoniae ATCC 700669BFirm LS3123312,221,3152,1354445860.5
210Bacillus tusciae DSM 2912BFirm BA3134513,384,7663,1505556040.9
211Lactobacillus rhamnosus GGBFirm LL3219513,010,1112,9445555753.3
212Listeria monocytogenes Clip80459BFirm BL3220712,912,6902,7906666761.9
213Streptococcus suis SC84BFirm LS3223912,095,8981,9854445658.9
214Lactobacillus plantarum JDM1BFirm LL3296913,197,7592,948N/AN/AN/AN/A55.3
215Thermoanaerobacter italicus Ab9BFirm CT3315712,451,0612,2703445465.9
216Thermoanaerobacter mathranii subsp. mathranii str. A3BFirm CT3332912,306,0922,1594445965.7
217Acidaminococcus fermentans DSM 20731BFirm CC3368512,329,7692,0266666044.2
218Streptococcus pneumoniae TCH8431/19ABFirm LS3465912,088,7722,2754445860.2
219Streptococcus gallolyticus UCN34BFirm LS3472912,350,9112,2616667162.4
220Staphylococcus aureus 04-02981BFirm BS3480912,821,4522,6507566267.1
221Staphylococcus carnosus subsp. carnosus TM300BFirm BS3481112,566,4242,4625556065.4
222Listeria monocytogenes 08-5923BFirm BL3636312,999,0542,9665555862.0
223Syntrophothermus lipocalidus DSM 12680BFirm CC3787312,405,5592,3132224649.0
224Clostridium difficile R20291380391N/AN/AN/AN/AN/AN/AN/A
225Lactobacillus rhamnosus GGBFirm LL4063713,005,0512,8345555953.3
226Listeria seeligeri serovar 1/2b str. SLCC3954BFirm BL4112312,797,6362,7226666762.6
227Staphylococcus aureus subsp. aureus ED133BFirm BS4127712,832,4782,6536555967.1
228Thermincola sp. JR414671N/AN/AN/AN/AN/AN/AN/A
229Geobacillus sp. C56-T3BFirm BB4170113,650,8133,3159888847.5
230Staphylococcus lugdunensis HKU09-01BFirm BS4239512,658,3662,4907666166.1
231Bacillus megaterium DSM319BFirm BB4242515,097,4475,12411111111561.9
232Clostridiales genomosp. BVAB3 str. UPII9-5BFirm CC4255511,810,2481,5262224555.8
233Lactobacillus fermentum CECT 5716BFirm LL4353312,100,4491,0515555748.4
234Lactococcus lactis subsp. cremoris NZ9000466231N/AN/AN/AN/AN/AN/AN/A
235Lactobacillus crispatus ST1BFirm LL4681312,043,1612,0244446463.1

Acknowledgements:

This research is funded by:

Developed by: