Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
235 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Acholeplasma laidlawii PG-8ABFirm MA1925911,496,99268.1N/A12
2Acidaminococcus fermentans DSM 20731BFirm CC3368512,329,76944.212N/A
3Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446BFirm BA2940543,205,68638.1165
4Alkaliphilus metalliredigens QYMFBFirm CC1300614,929,56663.21N/A14
5Alkaliphilus oremlandii OhILAsBFirm CC1608313,123,55863.71712
6Ammonifex degensii KC4BFirm CT1239022,157,06740.5161
7Anaerocellum thermophilum DSM 6725BFirm CC2940732,931,66264.8N/A82
8Anaerococcus prevotii DSM 20548BFirm CC2953321,998,63364.4N/A3N/A
9Anoxybacillus flavithermus WK1BFirm BB2824512,846,74658.2163
10Bacillus amyloliquefaciens FZB42BFirm BB1340313,918,58953.5186
11Bacillus anthracis CI363094290,59567.0N/AN/AN/A
12Bacillus anthracis str. 'Ames Ancestor'BFirm BB1078435,503,92664.81716
13Bacillus anthracis str. A0248BFirm BB3354335,503,92664.81716
14Bacillus anthracis str. AmesBFirm BB30915,227,29364.61716
15Bacillus anthracis str. CDC 684BFirm BB3132935,506,76364.81716
16Bacillus anthracis str. SterneBFirm BB1087815,228,66364.61716
17Bacillus cereus 03BB102BFirm BB3130725,449,30864.71715
18Bacillus cereus AH187BFirm BB1771555,599,85764.51716
19Bacillus cereus AH820BFirm BB1771145,588,83464.71618
20Bacillus cereus ATCC 10987BFirm BB7425,432,65264.51713
21Bacillus cereus ATCC 14579BFirm BB38425,427,08364.7179
22Bacillus cereus B4264BFirm BB1773115,419,03664.71713
23Bacillus cereus E33LBFirm BB1246865,843,23564.91816
24Bacillus cereus G9842BFirm BB1773335,736,82365.01811
25Bacillus cereus Q1BFirm BB1622035,506,20764.51717
26Bacillus clausii KSM-K16BFirm BB1329114,303,87155.3185
27Bacillus cytotoxicus NVH 391-98BFirm BB1362424,094,15964.1163
28Bacillus halodurans C-125BFirm BB23514,202,35256.31811
29Bacillus licheniformis ATCC 14580BFirm BB1308214,222,64553.8189
30Bacillus megaterium DSM319BFirm BB4242515,097,44761.9298
31Bacillus megaterium QM B1551BFirm BB3016585,523,19262.121010
32Bacillus pumilus SAFR-032BFirm BB2039113,704,46558.7187
33Bacillus selenitireducens MLS10BFirm BB1337613,592,48751.3148
34Bacillus subtilis subsp. subtilis str. 168BFirm BB7614,214,63056.5177
35Bacillus thuringiensis BMB171BFirm BB4363125,643,05164.8189
36Bacillus thuringiensis str. Al HakamBFirm BB1825525,313,03064.61714
37Bacillus tusciae DSM 2912BFirm BA3134513,384,76640.9176
38Brevibacillus brevis NBRC 100599BFirm BP2914716,296,43652.719N/A
39Candidatus Desulforudis audaxviator MP104CBFirm CC2104712,349,47639.1N/A73
40Candidatus Phytoplasma australienseBTMA294691879,95972.6N/A1N/A
41Carboxydothermus hydrogenoformans Z-2901BFirm CC25312,401,52058.0174
42Clostridiales genomosp. BVAB3 str. UPII9-5BFirm CC4255511,810,24855.8N/A1N/A
43Clostridium acetobutylicum ATCC 824BFirm CC7724,132,88069.1183
44Clostridium beijerinckii NCIMB 8052BFirm CC1263716,000,63270.11811
45Clostridium botulinum A str. ATCC 19397BFirm CC1951713,863,45071.8164
46Clostridium botulinum A str. HallBFirm CC1952113,760,56071.8164
47Clostridium botulinum A2 str. KyotoBFirm CC2985914,155,27871.8184
48Clostridium botulinum A3 str. Loch MareeBFirm CC2850724,259,69171.9184
49Clostridium botulinum B str. Eklund 17BBFirm CC2885723,847,96972.5187
50Clostridium botulinum B1 str. OkraBFirm CC2850524,107,01371.8164
51Clostridium botulinum Ba4 str. 657BFirm CC2907734,257,76972.0183
52Clostridium botulinum E3 str. Alaska E43BFirm CC2885513,659,64472.6175
53Clostridium botulinum F str. 230613BFirm CC4757524,010,61471.7175
54Clostridium botulinum F str. LangelandBFirm CC1951924,012,91871.7175
55Clostridium cellulolyticum H10BFirm CC1741914,068,72462.6N/A77
56Clostridium difficile 630BFirm CC7824,298,13370.9193
57Clostridium difficile R20291380391N/AN/AN/AN/AN/A
58Clostridium kluyveri DSM 555BFirm CC1906524,023,80068.0189
59Clostridium kluyveri NBRC 12016BFirm CC3327123,955,30368.0189
60Clostridium ljungdahlii ATCC 49587134921N/AN/AN/AN/AN/A
61Clostridium novyi NTBFirm CC1682012,547,72071.1173
62Clostridium perfringens ATCC 13124BFirm CC30413,256,68371.6163
63Clostridium perfringens SM101BFirm CC1252142,960,08871.8161
64Clostridium perfringens str. 13BFirm CC7923,085,74071.5163
65Clostridium phytofermentans ISDgBFirm CC1618414,847,59464.6N/A713
66Clostridium tetani E88BFirm CC8122,873,33371.416N/A
67Clostridium thermocellum ATCC 27405BFirm CC31413,843,30161.0N/A87
68Coprothermobacter proteolyticus DSM 5265BFirm CT3072911,424,91255.2124
69Desulfitobacterium hafniense DCB-2BFirm CC20515,279,13452.51721
70Desulfitobacterium hafniense Y51BFirm CC1663915,727,53452.61721
71Desulfotomaculum acetoxidans DSM 771BFirm CC2794714,545,62458.51812
72Desulfotomaculum reducens MI-1BFirm CC1342413,608,10457.7173
73Enterococcus faecalis V583BFirm LE7043,359,97462.6112
74Eubacterium eligens ATCC 27750BFirm CC2907332,831,38962.4N/A64
75Eubacterium rectale ATCC 33656BFirm CC2907113,449,68558.5N/A64
76Exiguobacterium sibiricum 255-15BFirm BB1064933,040,78652.3144
77Exiguobacterium sp. AT1bBFirm BB2775912,999,89551.5145
78Finegoldia magna ATCC 29328BFirm CC1898121,986,74067.9N/A2N/A
79Geobacillus kaustophilus HTA426BFirm BB1323323,592,66648.0183
80Geobacillus sp. C56-T3BFirm BB4170113,650,81347.5183
81Geobacillus sp. WCH70BFirm BB2080533,508,80457.2173
82Geobacillus sp. Y412MC10BFirm BB2777717,121,66548.8N/A936
83Geobacillus sp. Y412MC61BFirm BB3053723,667,90147.7183
84Geobacillus thermodenitrificans NG80-2BFirm BB1865523,608,01251.1184
85Halothermothrix orenii H 168BFirm CH1637712,578,14662.1191
86Heliobacterium modesticaldum Ice1BFirm CC1342713,075,40743.0184
87Lactobacillus acidophilus NCFMBFirm LL8211,993,56165.3N/A1N/A
88Lactobacillus brevis ATCC 367BFirm LL40432,340,22853.9N/A1N/A
89Lactobacillus casei ATCC 334BFirm LL40222,924,32553.4N/A1N/A
90Lactobacillus casei BL23BFirm LL3035913,079,19653.711N/A
91Lactobacillus casei str. Zhang285371N/AN/AN/AN/AN/A
92Lactobacillus crispatus ST1BFirm LL4681312,043,16163.1N/A1N/A
93Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842BFirm LL1687111,864,99850.3N/A21
94Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365BFirm LL40311,856,95150.3N/A21
95Lactobacillus fermentum CECT 5716BFirm LL4353312,100,44948.4N/A1N/A
96Lactobacillus fermentum IFO 3956BFirm LL1897912,098,68548.5N/A1N/A
97Lactobacillus gasseri ATCC 33323BFirm LL8411,894,36064.7N/A1N/A
98Lactobacillus helveticus DPC 4571BFirm LL1781112,080,93162.9N/A1N/A
99Lactobacillus johnsonii FI9785BFirm LL3657531,785,11665.611N/A
100Lactobacillus johnsonii NCC 533BFirm LL963811,992,67665.4N/A1N/A
101Lactobacillus plantarum JDM1BFirm LL3296913,197,75955.3N/AN/AN/A
102Lactobacillus plantarum WCFS1BFirm LL35643,348,62555.611N/A
103Lactobacillus reuteri DSM 20016BFirm LL1576611,999,61861.1N/A1N/A
104Lactobacillus reuteri JCM 1112BFirm LL1901112,039,41461.1N/A1N/A
105Lactobacillus rhamnosus GGBFirm LL3219513,010,11153.3N/A1N/A
106Lactobacillus rhamnosus GGBFirm LL4063713,005,05153.3N/A1N/A
107Lactobacillus rhamnosus Lc 705BFirm LL3219723,033,10653.3N/A1N/A
108Lactobacillus sakei subsp. sakei 23KBFirm LL1343511,884,66158.7N/A1N/A
109Lactobacillus salivarius CECT 5713435354N/AN/AN/AN/AN/A
110Lactobacillus salivarius UCC118BFirm LL1328042,133,97767.0N/A1N/A
111Lactococcus lactis subsp. cremoris MG1363BFirm LS1879712,529,47864.2N/A1N/A
112Lactococcus lactis subsp. cremoris NZ9000466231N/AN/AN/AN/AN/A
113Lactococcus lactis subsp. cremoris SK11BFirm LS40162,598,34864.2N/A11
114Lactococcus lactis subsp. lactis Il1403BFirm LS7212,365,58964.7N/A11
115Lactococcus lactis subsp. lactis KF147BFirm LS4111522,635,65465.1N/A11
116Leuconostoc citreum KM20BFirm LL1606251,896,61461.1N/A11
117Leuconostoc kimchii IMSNU 11154BFirm LL4083762,101,78762.1N/A11
118Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293BFirm LL31522,075,76362.3N/A1N/A
119Listeria innocua Clip11262BFirm BL8623,093,11362.6121
120Listeria monocytogenesBFirm BL3636123,109,34262.1121
121Listeria monocytogenes 08-5923BFirm BL3636312,999,05462.0121
122Listeria monocytogenes Clip80459BFirm BL3220712,912,69061.912N/A
123Listeria monocytogenes EGD-eBFirm BL27612,944,52862.0121
124Listeria monocytogenes HCC23BFirm BL2940912,976,21261.8121
125Listeria monocytogenes str. 4b F2365BFirm BL8512,905,18762.012N/A
126Listeria seeligeri serovar 1/2b str. SLCC3954BFirm BL4112312,797,63662.6122
127Listeria welshimeri serovar 6b str. SLCC5334BFirm BL1344312,814,13063.7121
128Lysinibacillus sphaericus C3-41BFirm BB1961924,817,46362.91813
129Macrococcus caseolyticus JCSC5402BFirm BM2020992,219,73763.4N/A2N/A
130Mesoplasma florum L1BFirm ME106501793,22473.0N/A1N/A
131Moorella thermoacetica ATCC 39073BFirm CT1064812,628,78444.2173
132Mycoplasma agalactiae PG2BFirm MM160951877,43870.3N/A1N/A
133Mycoplasma arthritidis 158L3-1BFirm MM14221820,45369.3N/A1N/A
134Mycoplasma capricolum subsp. capricolum ATCC 27343BFirm MM1620811,010,02376.2N/A1N/A
135Mycoplasma crocodyli MP145BTMM290211934,37973.0N/A1N/A
136Mycoplasma genitalium G37BFirm MM971580,07668.3N/A1N/A
137Mycoplasma hyopneumoniae 232BFirm MM131201892,75871.4N/A1N/A
138Mycoplasma hyopneumoniae 7448BFirm MM106391920,07971.5N/A1N/A
139Mycoplasma mobile 163KBFirm MM106971777,07975.1N/A1N/A
140Mycoplasma mycoides subsp. capri str. GM12BTMM1924511,089,20276.1N/A1N/A
141Mycoplasma mycoides subsp. mycoides SC str. PG1BFirm MM1061611,211,70376.0N/A1N/A
142Mycoplasma penetrans HF-2BFirm MM17611,358,63374.3N/A1N/A
143Mycoplasma pulmonis UAB CTIPBFirm MM1001963,87973.4N/A1N/A
144Mycoplasma synoviae 53BFirm MM106761799,47671.5N/A1N/A
145Natranaerobius thermophilus JW/NM-WN-LFBFirm CN2020733,191,45363.7176
146Oceanobacillus iheyensis HTE831BFirm BB28413,630,52864.3189
147Oenococcus oeni PSU-1BFirm LO31711,780,51762.1N/A1N/A
148Onion yellows phytoplasma OY-MBFirm MA96151860,63172.3N/A1N/A
149Paenibacillus sp. JDR-2BFirm BP2039917,184,93049.7N/A9N/A
150Pediococcus pentosaceus ATCC 25745BFirm LL39811,832,38762.611N/A
151Pelotomaculum thermopropionicum SIBFirm CC1902313,025,37547.0177
152Staphylococcus aureus 04-02981BFirm BS3480912,821,45267.1N/A2N/A
153Staphylococcus aureus ED98BFirm BS3954742,847,54267.2N/A2N/A
154Staphylococcus aureus RF122BFirm BS6312,742,53167.2N/A2N/A
155Staphylococcus aureus subsp. aureus COLBFirm BS23822,813,86267.2N/A2N/A
156Staphylococcus aureus subsp. aureus ED133BFirm BS4127712,832,47867.1N/A2N/A
157Staphylococcus aureus subsp. aureus JH1BFirm BS1575822,936,93667.1N/A2N/A
158Staphylococcus aureus subsp. aureus JH9BFirm BS1575722,937,12967.1N/A2N/A
159Staphylococcus aureus subsp. aureus MRSA252BFirm BS26512,902,61967.2N/A2N/A
160Staphylococcus aureus subsp. aureus MSSA476BFirm BS26622,820,45467.2N/A2N/A
161Staphylococcus aureus subsp. aureus Mu3BFirm BS1850912,880,16867.1N/A2N/A
162Staphylococcus aureus subsp. aureus Mu50BFirm BS26322,903,63667.2N/A2N/A
163Staphylococcus aureus subsp. aureus MW2BFirm BS30612,820,46267.2N/A2N/A
164Staphylococcus aureus subsp. aureus N315BFirm BS26422,839,46967.2N/A2N/A
165Staphylococcus aureus subsp. aureus NCTC 8325BFirm BS23712,821,36167.1N/A2N/A
166Staphylococcus aureus subsp. aureus ST398BFirm BS2942742,885,36767.1N/A2N/A
167Staphylococcus aureus subsp. aureus str. NewmanBFirm BS1880112,878,89767.1N/A2N/A
168Staphylococcus aureus subsp. aureus TW2036647332,59667.5N/AN/AN/A
169Staphylococcus aureus subsp. aureus USA300_FPR3757BFirm BS1631342,917,46967.3N/A2N/A
170Staphylococcus aureus subsp. aureus USA300_TCH1516BFirm BS1948932,903,08167.3N/A2N/A
171Staphylococcus carnosus subsp. carnosus TM300BFirm BS3481112,566,42465.4N/A2N/A
172Staphylococcus epidermidis ATCC 12228BFirm BS27972,564,61567.9N/A2N/A
173Staphylococcus epidermidis RP62ABFirm BS6422,643,84067.9N/A2N/A
174Staphylococcus haemolyticus JCSC1435BFirm BS1250842,697,86167.2N/A2N/A
175Staphylococcus lugdunensis HKU09-01BFirm BS4239512,658,36666.1N/A2N/A
176Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305BFirm BS1559632,577,89966.8N/A2N/A
177Streptococcus agalactiae 2603V/RBFirm LS33012,160,26764.3N/A11
178Streptococcus agalactiae A909BFirm LS32612,127,83964.4N/A11
179Streptococcus agalactiae NEM316BFirm LS33412,211,48564.4N/A11
180Streptococcus dysgalactiae subsp. equisimilis GGS_124BFirm LS2784912,106,34060.4N/A11
181Streptococcus equi subsp. equi 4047BFirm LS3076512,253,79358.7N/A12
182Streptococcus equi subsp. zooepidemicusBFirm LS3076712,149,86858.5N/A12
183Streptococcus equi subsp. zooepidemicus MGCS10565BFirm LS3078112,024,17158.2N/A12
184Streptococcus gallolyticus UCN34BFirm LS3472912,350,91162.4N/A11
185Streptococcus gordonii str. Challis substr. CH1BFirm LS6612,196,66259.5N/A1N/A
186Streptococcus mitis B6BFirm LS1630212,146,61160.0N/A1N/A
187Streptococcus mutans NN2025289971N/AN/AN/AN/AN/A
188Streptococcus mutans UA159BFirm LS33312,030,92163.2N/A1N/A
189Streptococcus pneumoniae 70585BFirm LS2804312,184,68260.3N/A1N/A
190Streptococcus pneumoniae ATCC 700669BFirm LS3123312,221,31560.5N/A1N/A
191Streptococcus pneumoniae CGSP14BFirm LS2917912,209,19860.5N/A1N/A
192Streptococcus pneumoniae D39BFirm LS1637412,046,11560.3N/A1N/A
193Streptococcus pneumoniae G54BFirm LS2904712,078,95360.3N/A1N/A
194Streptococcus pneumoniae Hungary19A-6BFirm LS2803512,245,61560.4N/A1N/A
195Streptococcus pneumoniae JJABFirm LS2803912,120,23460.3N/A1N/A
196Streptococcus pneumoniae P1031BFirm LS2804112,111,88260.3N/A1N/A
197Streptococcus pneumoniae R6BFirm LS27812,038,61560.3N/A1N/A
198Streptococcus pneumoniae Taiwan19F-14BFirm LS2803712,112,14860.2N/A1N/A
199Streptococcus pneumoniae TCH8431/19ABFirm LS3465912,088,77260.2N/A1N/A
200Streptococcus pneumoniae TIGR4BFirm LS27712,160,84260.3N/A1N/A
201Streptococcus pyogenes M1 GASBFirm LS26911,852,44161.5N/A1N/A
202Streptococcus pyogenes MGAS10270BFirm LS1636411,928,25261.6N/A1N/A
203Streptococcus pyogenes MGAS10394BFirm LS1246911,899,87761.3N/A1N/A
204Streptococcus pyogenes MGAS10750BFirm LS1636611,937,11161.7N/A1N/A
205Streptococcus pyogenes MGAS2096BFirm LS1636511,860,35561.3N/A1N/A
206Streptococcus pyogenes MGAS315BFirm LS31111,900,52161.4N/A1N/A
207Streptococcus pyogenes MGAS5005BFirm LS1388811,838,55461.5N/A1N/A
208Streptococcus pyogenes MGAS6180BFirm LS1388711,897,57361.7N/A1N/A
209Streptococcus pyogenes MGAS8232BFirm LS28611,895,01761.4N/A1N/A
210Streptococcus pyogenes MGAS9429BFirm LS1636311,836,46761.5N/A1N/A
211Streptococcus pyogenes NZ131BFirm LS2070711,815,78561.4N/A1N/A
212Streptococcus pyogenes SSI-1BFirm LS30111,894,27561.4N/A1N/A
213Streptococcus pyogenes str. ManfredoBFirm LS27011,841,27161.4N/A1N/A
214Streptococcus sanguinis SK36BFirm LS1394212,388,43556.6N/A1N/A
215Streptococcus suis 05ZYH33BFirm LS1715312,096,30958.9N/A11
216Streptococcus suis 98HAH33BFirm LS1715512,095,69858.9N/A11
217Streptococcus suis BM407BFirm LS3223722,170,80859.0N/A11
218Streptococcus suis GZ1187371N/AN/AN/AN/AN/A
219Streptococcus suis P1/7BFirm LS35212,007,49158.7N/A11
220Streptococcus suis SC84BFirm LS3223912,095,89858.9N/A11
221Streptococcus thermophilus CNRZ1066BFirm LS1316311,796,22660.9N/A1N/A
222Streptococcus thermophilus LMD-9BFirm LS1377331,864,17860.9N/A1N/A
223Streptococcus thermophilus LMG 18311BFirm LS1316211,796,84660.9N/A1N/A
224Streptococcus uberis 0140JBFirm LS35311,852,35263.4N/A11
225Symbiobacterium thermophilum IAM 14863BFirm LS1299413,566,13531.31718
226Syntrophothermus lipocalidus DSM 12680BFirm CC3787312,405,55949.0172
227Thermincola sp. JR414671N/AN/AN/AN/AN/A
228Thermoanaerobacter italicus Ab9BFirm CT3315712,451,06165.9184
229Thermoanaerobacter mathranii subsp. mathranii str. A3BFirm CT3332912,306,09265.7172
230Thermoanaerobacter pseudethanolicus ATCC 33223BFirm CT1390112,362,81665.5172
231Thermoanaerobacter sp. X514BFirm CT1639412,457,25965.5N/A73
232Thermoanaerobacter tengcongensis MB4BFirm CT24912,689,44562.4185
233Ureaplasma parvum serovar 3 str. ATCC 27815BFirm MM190871751,67974.5N/A1N/A
234Ureaplasma parvum serovar 3 str. ATCC 700970BFirm MM1011751,71974.5N/A1N/A
235Veillonella parvula DSM 2008BFirm CC2109112,132,14261.4N/A2N/A

Acknowledgements:

This research is funded by:

Developed by: