Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
132 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Acetobacter pasteurianus IFO 3283-01BProt AR3112973,340,24946.9N/A22
2Acetobacter pasteurianus IFO 3283-01-42CBProt AR3114173,247,99546.9N/A22
3Acetobacter pasteurianus IFO 3283-03BProt AR3113173,339,66946.9N/A22
4Acetobacter pasteurianus IFO 3283-07BProt AR3113373,338,42646.9N/A22
5Acetobacter pasteurianus IFO 3283-12BProt AR3220373,336,99046.9N/A22
6Acetobacter pasteurianus IFO 3283-22BProt AR3113573,339,64946.9N/A22
7Acetobacter pasteurianus IFO 3283-26BProt AR3113773,339,68346.9N/A22
8Acetobacter pasteurianus IFO 3283-32BProt AR3113973,337,04046.9N/A22
9Acidiphilium cryptum JF-5BProt AR1575393,963,08032.9123
10Agrobacterium radiobacter K84BProt ARh1340257,273,30040.1134
11Agrobacterium tumefaciens str. C58BProt ARh28345,673,46541.01211
12Agrobacterium vitis S4BProt ARh1337276,320,94642.5139
13Anaplasma centrale str. IsraelBProt ARi3276511,206,80650.0N/A2N/A
14Anaplasma marginale str. FloridaBProt ARi1636911,202,43550.2N/A2N/A
15Anaplasma marginale str. St. MariesBProt ARi4011,197,68750.2N/A2N/A
16Anaplasma phagocytophilum HZBProt ARi33611,471,28258.4N/A2N/A
17Azospirillum sp. B510BProt AR3255177,599,73832.41610
18Bartonella bacilliformis KC583BProt ARh1624911,445,02161.8N/A3N/A
19Bartonella grahamii as4aupBProt ARh3487322,369,52062.0N/A31
20Bartonella henselae str. Houston-1BProt ARh19611,931,04761.8N/A31
21Bartonella quintana str. ToulouseBProt ARh4411,581,38461.2N/A31
22Bartonella tribocorum CIP 105476BProt ARh2810922,642,40461.2N/AN/A1
23Beijerinckia indica subsp. indica ATCC 9039BProt ARh2084134,418,61643.0125
24Bradyrhizobium japonicum USDA 110BProt ARh1719,105,82835.92417
25Bradyrhizobium sp. BTAi1BProt ARh1613728,493,51335.21215
26Bradyrhizobium sp. ORS278BProt ARh1957517,456,58734.51215
27Brucella abortus bv. 1 str. 9-941BProt ARh961923,286,44542.8132
28Brucella abortus S19BProt ARh1899923,283,93642.8132
29Brucella canis ATCC 23365BProt ARh2024323,312,76942.8132
30Brucella melitensis ATCC 23457BProt ARh3056123,311,21942.8132
31Brucella melitensis biovar Abortus 2308BProt ARh1620323,278,30742.8132
32Brucella melitensis bv. 1 str. 16MBProt ARh18023,294,93142.8131
33Brucella microti CCM 4915BProt ARh3223323,337,36942.7132
34Brucella ovis ATCC 25840BProt ARh1251423,275,59042.8132
35Brucella suis 1330BProt ARh32023,315,17542.7132
36Brucella suis ATCC 23445BProt ARh2037123,324,60742.8N/AN/A2
37Candidatus Hodgkinia cicadicola DsemBProt AC321351143,79541.6N/AN/AN/A
38Candidatus Liberibacter asiaticus str. psy62BProt ARh2983511,226,70463.5N/A2N/A
39Candidatus Pelagibacter ubique HTCC1062BProt ARi1398911,308,75970.3N/A2N/A
40Candidatus Puniceispirillum marinum IMCC1322BProt AS2808112,753,52751.213N/A
41Caulobacter crescentus CB15BProt AC29814,016,94732.81215
42Caulobacter crescentus NA1000BProt AC3202714,042,92932.81215
43Caulobacter segnis ATCC 21756BProt AC3727714,655,62232.31225
44Caulobacter sp. K31BProt AC1630635,889,39932.71228
45Chelativorans sp. BNC1BProt ARh1069044,935,18538.9236
46Dinoroseobacter shibae DFL 12BProt AR1741764,417,86834.5135
47Ehrlichia canis str. JakeBProt ARi1069411,315,03071.0N/A2N/A
48Ehrlichia chaffeensis str. ArkansasBProt ARi32511,176,24869.9N/A2N/A
49Ehrlichia ruminantium str. GardelBProt ARi1335611,499,92072.5N/A2N/A
50Ehrlichia ruminantium str. WelgevondenBProt ARi961411,516,35572.5N/A2N/A
51Ehrlichia ruminantium str. WelgevondenBProt ARi1335511,512,97772.5N/A2N/A
52Erythrobacter litoralis HTCC2594BProt AS1348013,052,39836.9126
53Gluconacetobacter diazotrophicus PAl 5BProt AR37733,999,59133.7223
54Gluconacetobacter diazotrophicus PAl 5BProt AR2107123,914,94733.7223
55Gluconobacter oxydans 621HBProt AR1332562,922,38439.2124
56Granulibacter bethesdensis CGDNIH1BProt AR1711112,708,35540.9122
57Hirschia baltica ATCC 49814BProt AR3319123,540,11454.8N/AN/AN/A
58Hyphomicrobium denitrificans ATCC 51888BProt ARh3326113,638,96939.2127
59Hyphomonas neptunium ATCC 15444BProt AR1572113,705,02138.1138
60Jannaschia sp. CCS1BProt AR1273324,404,04937.8N/A36
61Magnetospirillum magneticum AMB-1BProt AR1621714,967,14834.9134
62Maricaulis maris MCS10BProt AR1733313,368,78037.3137
63Mesorhizobium loti MAFF303099BProt ARh1837,596,29737.523N/A
64Methylobacterium chloromethanicum CM4BProt ARh1952736,180,73231.91314
65Methylobacterium extorquens AM1BProt ARh2056,879,77831.51514
66Methylobacterium extorquens DM4160933180,08335.0N/AN/AN/A
67Methylobacterium extorquens PA1BProt ARh1863715,471,15431.8139
68Methylobacterium nodulans ORS 2060BProt ARh2047788,839,02231.62316
69Methylobacterium populi BJ001BProt ARh1955935,848,99730.61311
70Methylobacterium radiotolerans JCM 2831BProt ARh1881796,899,11029.01316
71Methylobacterium sp. 4-46BProt ARh1880937,737,02528.513N/A
72Methylocella silvestris BL2BProt ARh2063514,305,43036.9128
73Neorickettsia risticii str. IllinoisBProt ARi190991879,97758.7N/A2N/A
74Neorickettsia sennetsu str. MiyayamaBProt ARi3571859,00658.9N/A2N/A
75Nitrobacter hamburgensis X14BProt ARh1347345,011,52238.4128
76Nitrobacter winogradskyi Nb-255BProt ARh1347413,402,09338.01213
77Novosphingobium aromaticivorans DSM 12444BProt AS20434,233,31434.9136
78Ochrobactrum anthropi ATCC 49188BProt ARh1948565,205,77743.9139
79Oligotropha carboxidovorans OM5BProt ARh2880513,745,62937.6138
80Orientia tsutsugamushi str. BoryongBProt ARi1618012,127,05169.5N/A2N/A
81Orientia tsutsugamushi str. IkedaBProt ARi1898312,008,98769.5N/A2N/A
82Paracoccus denitrificans PD1222BProt AR1302035,236,19433.2138
83Parvibaculum lavamentivorans DS-1BProt ARh1763913,914,74537.7135
84Phenylobacterium zucineum HLK1BProt AC1993124,379,23128.91417
85Rhizobium etli CFN 42BProt ARh1393276,530,22839.0237
86Rhizobium etli CIAT 652BProt ARh2802146,448,04838.72314
87Rhizobium leguminosarum bv. trifolii WSM1325BProt ARh2009767,418,12239.21316
88Rhizobium leguminosarum bv. trifolii WSM2304BProt ARh2017956,872,70238.82316
89Rhizobium leguminosarum bv. viciae 3841BProt ARh34477,751,30939.11314
90Rhizobium sp. NGR234BProt ARh2110136,891,90037.61310
91Rhodobacter capsulatus SB 1003BProt AR5523,871,92033.4133
92Rhodobacter sphaeroides 2.4.1BProt AR5674,603,06031.2448
93Rhodobacter sphaeroides ATCC 17025BProt AR1575564,557,12731.8345
94Rhodobacter sphaeroides ATCC 17029BProt AR1575434,489,38031.04410
95Rhodobacter sphaeroides KD131BProt AR3111144,711,13930.94410
96Rhodopseudomonas palustris BisA53BProt ARh1575115,505,49435.61219
97Rhodopseudomonas palustris BisB18BProt ARh1575015,513,84435.0129
98Rhodopseudomonas palustris BisB5BProt ARh1574914,892,71735.212N/A
99Rhodopseudomonas palustris CGA009BProt ARh5725,467,64035.01216
100Rhodopseudomonas palustris HaA2BProt ARh1574715,331,65634.01319
101Rhodopseudomonas palustris TIE-1BProt ARh2016715,744,04135.11315
102Rhodospirillum centenum SWBProt AR1830714,355,54829.51413
103Rhodospirillum rubrum ATCC 11170BProt AR5824,406,55734.6137
104Rickettsia africae ESF-5BProt ARi1826921,290,91767.6N/A2N/A
105Rickettsia akari str. HartfordBProt ARi1295311,231,06067.7N/A2N/A
106Rickettsia bellii OSU 85-389BProt ARi1723711,528,98068.4N/A1N/A
107Rickettsia bellii RML369-CBProt ARi1399611,522,07668.3N/A2N/A
108Rickettsia canadensis str. McKielBProt ARi1295211,159,77268.9N/A2N/A
109Rickettsia conorii str. Malish 7BProt ARi4211,268,75567.6N/A2N/A
110Rickettsia felis URRWXCal2BProt ARi1388431,587,24067.5N/A2N/A
111Rickettsia massiliae MTU5BProt ARi1827121,376,18467.5N/A2N/A
112Rickettsia peacockii str. RusticBProt ARi3130921,314,89867.4N/A2N/A
113Rickettsia prowazekii Rp22BProt ARi1981311,111,61271.0N/A2N/A
114Rickettsia prowazekii str. Madrid EBProt ARi4311,111,52371.0N/A2N/A
115Rickettsia rickettsii str. 'Sheila Smith'BProt ARi963611,257,71067.5N/A2N/A
116Rickettsia rickettsii str. IowaBProt ARi1994311,268,17567.5N/A2N/A
117Rickettsia typhi str. WilmingtonBProt ARi1067911,111,49671.1N/A2N/A
118Roseobacter denitrificans OCh 114BProt AR1642654,331,23441.1N/A36
119Ruegeria sp. TM1040BProt AR1304034,153,69939.9N/A36
120Sinorhizobium medicae WSM419BProt ARh1630446,817,57638.81310
121Sinorhizobium meliloti 1021BProt ARh1936,691,69437.81311
122Sphingobium japonicum UT26SBProt AS1994954,424,86235.1139
123Sphingomonas wittichii RW1BProt AS1734335,915,24632.11314
124Sphingopyxis alaskensis RB2256BProt AS1390723,373,71334.51311
125Starkeya novella DSM 506BProt ARh3765914,765,02332.1137
126Wolbachia endosymbiont of Culex quinquefasciatus PelBProt ARi3031311,482,45565.8N/A2N/A
127Wolbachia endosymbiont of Drosophila melanogasterBProt ARi27211,267,78264.8N/A2N/A
128Wolbachia endosymbiont strain TRS of Brugia malayiBProt ARi1247511,080,08465.8N/A2N/A
129Wolbachia sp. wRiBProt ARi3327311,445,87364.8N/A2N/A
130Xanthobacter autotrophicus Py2BProt ARh1575625,625,09832.71214
131Zymomonas mobilis subsp. mobilis NCIMB 11163BProt AS3482142,223,52053.4131
132Zymomonas mobilis subsp. mobilis ZM4BProt AS1235412,056,41653.7131

Acknowledgements:

This research is funded by:

Developed by: