Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
132 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Acidiphilium cryptum JF-5BProt AR1575393,963,08032.9123
2Methylobacterium radiotolerans JCM 2831BProt ARh1881796,899,11029.01316
3Methylobacterium nodulans ORS 2060BProt ARh2047788,839,02231.62316
4Rhodobacter sphaeroides 2.4.1BProt AR5674,603,06031.2448
5Rhizobium leguminosarum bv. viciae 3841BProt ARh34477,751,30939.11314
6Agrobacterium vitis S4BProt ARh1337276,320,94642.5139
7Rhizobium etli CFN 42BProt ARh1393276,530,22839.0237
8Acetobacter pasteurianus IFO 3283-01BProt AR3112973,340,24946.9N/A22
9Acetobacter pasteurianus IFO 3283-03BProt AR3113173,339,66946.9N/A22
10Acetobacter pasteurianus IFO 3283-07BProt AR3113373,338,42646.9N/A22
11Acetobacter pasteurianus IFO 3283-22BProt AR3113573,339,64946.9N/A22
12Acetobacter pasteurianus IFO 3283-26BProt AR3113773,339,68346.9N/A22
13Acetobacter pasteurianus IFO 3283-32BProt AR3113973,337,04046.9N/A22
14Acetobacter pasteurianus IFO 3283-01-42CBProt AR3114173,247,99546.9N/A22
15Acetobacter pasteurianus IFO 3283-12BProt AR3220373,336,99046.9N/A22
16Azospirillum sp. B510BProt AR3255177,599,73832.41610
17Gluconobacter oxydans 621HBProt AR1332562,922,38439.2124
18Rhodobacter sphaeroides ATCC 17025BProt AR1575564,557,12731.8345
19Dinoroseobacter shibae DFL 12BProt AR1741764,417,86834.5135
20Ochrobactrum anthropi ATCC 49188BProt ARh1948565,205,77743.9139
21Rhizobium leguminosarum bv. trifolii WSM1325BProt ARh2009767,418,12239.21316
22Methylobacterium extorquens AM1BProt ARh2056,879,77831.51514
23Agrobacterium radiobacter K84BProt ARh1340257,273,30040.1134
24Roseobacter denitrificans OCh 114BProt AR1642654,331,23441.1N/A36
25Sphingobium japonicum UT26SBProt AS1994954,424,86235.1139
26Rhizobium leguminosarum bv. trifolii WSM2304BProt ARh2017956,872,70238.82316
27Agrobacterium tumefaciens str. C58BProt ARh28345,673,46541.01211
28Chelativorans sp. BNC1BProt ARh1069044,935,18538.9236
29Nitrobacter hamburgensis X14BProt ARh1347345,011,52238.4128
30Sinorhizobium medicae WSM419BProt ARh1630446,817,57638.81310
31Rhizobium etli CIAT 652BProt ARh2802146,448,04838.72314
32Rhodobacter sphaeroides KD131BProt AR3111144,711,13930.94410
33Zymomonas mobilis subsp. mobilis NCIMB 11163BProt AS3482142,223,52053.4131
34Mesorhizobium loti MAFF303099BProt ARh1837,596,29737.523N/A
35Sinorhizobium meliloti 1021BProt ARh1936,691,69437.81311
36Novosphingobium aromaticivorans DSM 12444BProt AS20434,233,31434.9136
37Gluconacetobacter diazotrophicus PAl 5BProt AR37733,999,59133.7223
38Paracoccus denitrificans PD1222BProt AR1302035,236,19433.2138
39Ruegeria sp. TM1040BProt AR1304034,153,69939.9N/A36
40Rickettsia felis URRWXCal2BProt ARi1388431,587,24067.5N/A2N/A
41Rhodobacter sphaeroides ATCC 17029BProt AR1575434,489,38031.04410
42Methylobacterium extorquens DM4160933180,08335.0N/AN/AN/A
43Caulobacter sp. K31BProt AC1630635,889,39932.71228
44Sphingomonas wittichii RW1BProt AS1734335,915,24632.11314
45Methylobacterium sp. 4-46BProt ARh1880937,737,02528.513N/A
46Methylobacterium chloromethanicum CM4BProt ARh1952736,180,73231.91314
47Methylobacterium populi BJ001BProt ARh1955935,848,99730.61311
48Beijerinckia indica subsp. indica ATCC 9039BProt ARh2084134,418,61643.0125
49Rhizobium sp. NGR234BProt ARh2110136,891,90037.61310
50Rhodobacter capsulatus SB 1003BProt AR5523,871,92033.4133
51Rhodopseudomonas palustris CGA009BProt ARh5725,467,64035.01216
52Rhodospirillum rubrum ATCC 11170BProt AR5824,406,55734.6137
53Brucella melitensis bv. 1 str. 16MBProt ARh18023,294,93142.8131
54Brucella suis 1330BProt ARh32023,315,17542.7132
55Brucella abortus bv. 1 str. 9-941BProt ARh961923,286,44542.8132
56Brucella ovis ATCC 25840BProt ARh1251423,275,59042.8132
57Jannaschia sp. CCS1BProt AR1273324,404,04937.8N/A36
58Sphingopyxis alaskensis RB2256BProt AS1390723,373,71334.51311
59Xanthobacter autotrophicus Py2BProt ARh1575625,625,09832.71214
60Bradyrhizobium sp. BTAi1BProt ARh1613728,493,51335.21215
61Brucella melitensis biovar Abortus 2308BProt ARh1620323,278,30742.8132
62Rickettsia africae ESF-5BProt ARi1826921,290,91767.6N/A2N/A
63Rickettsia massiliae MTU5BProt ARi1827121,376,18467.5N/A2N/A
64Brucella abortus S19BProt ARh1899923,283,93642.8132
65Phenylobacterium zucineum HLK1BProt AC1993124,379,23128.91417
66Brucella canis ATCC 23365BProt ARh2024323,312,76942.8132
67Brucella suis ATCC 23445BProt ARh2037123,324,60742.8N/AN/A2
68Gluconacetobacter diazotrophicus PAl 5BProt AR2107123,914,94733.7223
69Bartonella tribocorum CIP 105476BProt ARh2810922,642,40461.2N/AN/A1
70Brucella melitensis ATCC 23457BProt ARh3056123,311,21942.8132
71Rickettsia peacockii str. RusticBProt ARi3130921,314,89867.4N/A2N/A
72Brucella microti CCM 4915BProt ARh3223323,337,36942.7132
73Hirschia baltica ATCC 49814BProt AR3319123,540,11454.8N/AN/AN/A
74Bartonella grahamii as4aupBProt ARh3487322,369,52062.0N/A31
75Bradyrhizobium japonicum USDA 110BProt ARh1719,105,82835.92417
76Anaplasma marginale str. St. MariesBProt ARi4011,197,68750.2N/A2N/A
77Rickettsia conorii str. Malish 7BProt ARi4211,268,75567.6N/A2N/A
78Rickettsia prowazekii str. Madrid EBProt ARi4311,111,52371.0N/A2N/A
79Bartonella quintana str. ToulouseBProt ARh4411,581,38461.2N/A31
80Bartonella henselae str. Houston-1BProt ARh19611,931,04761.8N/A31
81Wolbachia endosymbiont of Drosophila melanogasterBProt ARi27211,267,78264.8N/A2N/A
82Caulobacter crescentus CB15BProt AC29814,016,94732.81215
83Ehrlichia chaffeensis str. ArkansasBProt ARi32511,176,24869.9N/A2N/A
84Anaplasma phagocytophilum HZBProt ARi33611,471,28258.4N/A2N/A
85Neorickettsia sennetsu str. MiyayamaBProt ARi3571859,00658.9N/A2N/A
86Ehrlichia ruminantium str. WelgevondenBProt ARi961411,516,35572.5N/A2N/A
87Rickettsia rickettsii str. 'Sheila Smith'BProt ARi963611,257,71067.5N/A2N/A
88Rickettsia typhi str. WilmingtonBProt ARi1067911,111,49671.1N/A2N/A
89Ehrlichia canis str. JakeBProt ARi1069411,315,03071.0N/A2N/A
90Zymomonas mobilis subsp. mobilis ZM4BProt AS1235412,056,41653.7131
91Wolbachia endosymbiont strain TRS of Brugia malayiBProt ARi1247511,080,08465.8N/A2N/A
92Rickettsia canadensis str. McKielBProt ARi1295211,159,77268.9N/A2N/A
93Rickettsia akari str. HartfordBProt ARi1295311,231,06067.7N/A2N/A
94Ehrlichia ruminantium str. WelgevondenBProt ARi1335511,512,97772.5N/A2N/A
95Ehrlichia ruminantium str. GardelBProt ARi1335611,499,92072.5N/A2N/A
96Nitrobacter winogradskyi Nb-255BProt ARh1347413,402,09338.01213
97Erythrobacter litoralis HTCC2594BProt AS1348013,052,39836.9126
98Candidatus Pelagibacter ubique HTCC1062BProt ARi1398911,308,75970.3N/A2N/A
99Rickettsia bellii RML369-CBProt ARi1399611,522,07668.3N/A2N/A
100Hyphomonas neptunium ATCC 15444BProt AR1572113,705,02138.1138
101Rhodopseudomonas palustris HaA2BProt ARh1574715,331,65634.01319
102Rhodopseudomonas palustris BisB5BProt ARh1574914,892,71735.212N/A
103Rhodopseudomonas palustris BisB18BProt ARh1575015,513,84435.0129
104Rhodopseudomonas palustris BisA53BProt ARh1575115,505,49435.61219
105Orientia tsutsugamushi str. BoryongBProt ARi1618012,127,05169.5N/A2N/A
106Magnetospirillum magneticum AMB-1BProt AR1621714,967,14834.9134
107Bartonella bacilliformis KC583BProt ARh1624911,445,02161.8N/A3N/A
108Anaplasma marginale str. FloridaBProt ARi1636911,202,43550.2N/A2N/A
109Granulibacter bethesdensis CGDNIH1BProt AR1711112,708,35540.9122
110Rickettsia bellii OSU 85-389BProt ARi1723711,528,98068.4N/A1N/A
111Maricaulis maris MCS10BProt AR1733313,368,78037.3137
112Parvibaculum lavamentivorans DS-1BProt ARh1763913,914,74537.7135
113Rhodospirillum centenum SWBProt AR1830714,355,54829.51413
114Methylobacterium extorquens PA1BProt ARh1863715,471,15431.8139
115Orientia tsutsugamushi str. IkedaBProt ARi1898312,008,98769.5N/A2N/A
116Neorickettsia risticii str. IllinoisBProt ARi190991879,97758.7N/A2N/A
117Bradyrhizobium sp. ORS278BProt ARh1957517,456,58734.51215
118Rickettsia prowazekii Rp22BProt ARi1981311,111,61271.0N/A2N/A
119Rickettsia rickettsii str. IowaBProt ARi1994311,268,17567.5N/A2N/A
120Rhodopseudomonas palustris TIE-1BProt ARh2016715,744,04135.11315
121Methylocella silvestris BL2BProt ARh2063514,305,43036.9128
122Candidatus Puniceispirillum marinum IMCC1322BProt AS2808112,753,52751.213N/A
123Oligotropha carboxidovorans OM5BProt ARh2880513,745,62937.6138
124Candidatus Liberibacter asiaticus str. psy62BProt ARh2983511,226,70463.5N/A2N/A
125Wolbachia endosymbiont of Culex quinquefasciatus PelBProt ARi3031311,482,45565.8N/A2N/A
126Caulobacter crescentus NA1000BProt AC3202714,042,92932.81215
127Candidatus Hodgkinia cicadicola DsemBProt AC321351143,79541.6N/AN/AN/A
128Anaplasma centrale str. IsraelBProt ARi3276511,206,80650.0N/A2N/A
129Hyphomicrobium denitrificans ATCC 51888BProt ARh3326113,638,96939.2127
130Wolbachia sp. wRiBProt ARi3327311,445,87364.8N/A2N/A
131Caulobacter segnis ATCC 21756BProt AC3727714,655,62232.31225
132Starkeya novella DSM 506BProt ARh3765914,765,02332.1137

Acknowledgements:

This research is funded by:

Developed by: