Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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132 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATHisKA
Count
HisKA 1
Count
HisKA 2
Count
HisKA 3
Count
HWE HK
Count
RRReceiver
Count
1Zymomonas mobilis subsp. mobilis ZM4BProt AS1235412,056,41653.79720014
2Zymomonas mobilis subsp. mobilis NCIMB 11163BProt AS3482142,223,52053.49720014
3Xanthobacter autotrophicus Py2BProt ARh1575625,625,09832.7434030052
4Wolbachia sp. wRiBProt ARi3327311,445,87364.8220003
5Wolbachia endosymbiont strain TRS of Brugia malayiBProt ARi1247511,080,08465.8220003
6Wolbachia endosymbiont of Drosophila melanogasterBProt ARi27211,267,78264.8220003
7Wolbachia endosymbiont of Culex quinquefasciatus PelBProt ARi3031311,482,45565.8220003
8Starkeya novella DSM 506BProt ARh3765914,765,02332.1353112150
9Sphingopyxis alaskensis RB2256BProt AS1390723,373,71334.5131100223
10Sphingomonas wittichii RW1BProt AS1734335,915,24632.1353120258
11Sphingobium japonicum UT26SBProt AS1994954,424,86235.1282420243
12Sinorhizobium meliloti 1021BProt ARh1936,691,69437.8382802853
13Sinorhizobium medicae WSM419BProt ARh1630446,817,57638.8402921855
14Ruegeria sp. TM1040BProt AR1304034,153,69939.9363411039
15Roseobacter denitrificans OCh 114BProt AR1642654,331,23441.1201721031
16Rickettsia typhi str. WilmingtonBProt ARi1067911,111,49671.1440004
17Rickettsia rickettsii str. IowaBProt ARi1994311,268,17567.5440004
18Rickettsia rickettsii str. 'Sheila Smith'BProt ARi963611,257,71067.5440003
19Rickettsia prowazekii str. Madrid EBProt ARi4311,111,52371.0440004
20Rickettsia prowazekii Rp22BProt ARi1981311,111,61271.0440004
21Rickettsia peacockii str. RusticBProt ARi3130921,314,89867.4330004
22Rickettsia massiliae MTU5BProt ARi1827121,376,18467.5330004
23Rickettsia felis URRWXCal2BProt ARi1388431,587,24067.5440004
24Rickettsia conorii str. Malish 7BProt ARi4211,268,75567.6440004
25Rickettsia canadensis str. McKielBProt ARi1295211,159,77268.9330004
26Rickettsia bellii RML369-CBProt ARi1399611,522,07668.3440004
27Rickettsia bellii OSU 85-389BProt ARi1723711,528,98068.4440004
28Rickettsia akari str. HartfordBProt ARi1295311,231,06067.7330004
29Rickettsia africae ESF-5BProt ARi1826921,290,91767.6330004
30Rhodospirillum rubrum ATCC 11170BProt AR5824,406,55734.6383240257
31Rhodospirillum centenum SWBProt AR1830714,355,54829.5483940555
32Rhodopseudomonas palustris TIE-1BProt ARh2016715,744,04135.1523932869
33Rhodopseudomonas palustris HaA2BProt ARh1574715,331,65634.0504053271
34Rhodopseudomonas palustris CGA009BProt ARh5725,467,64035.0533942869
35Rhodopseudomonas palustris BisB5BProt ARh1574914,892,71735.2463732462
36Rhodopseudomonas palustris BisB18BProt ARh1575015,513,84435.0524361278
37Rhodopseudomonas palustris BisA53BProt ARh1575115,505,49435.6474122276
38Rhodobacter sphaeroides KD131BProt AR3111144,711,13930.9362651452
39Rhodobacter sphaeroides ATCC 17029BProt AR1575434,489,38031.0332650251
40Rhodobacter sphaeroides ATCC 17025BProt AR1575564,557,12731.8322360349
41Rhodobacter sphaeroides 2.4.1BProt AR5674,603,06031.2362760353
42Rhodobacter capsulatus SB 1003BProt AR5523,871,92033.4262321043
43Rhizobium sp. NGR234BProt ARh2110136,891,90037.6373011554
44Rhizobium leguminosarum bv. viciae 3841BProt ARh34477,751,30939.1544531571
45Rhizobium leguminosarum bv. trifolii WSM2304BProt ARh2017956,872,70238.8524221763
46Rhizobium leguminosarum bv. trifolii WSM1325BProt ARh2009767,418,12239.2644871884
47Rhizobium etli CIAT 652BProt ARh2802146,448,04838.7433620557
48Rhizobium etli CFN 42BProt ARh1393276,530,22839.0473931462
49Phenylobacterium zucineum HLK1BProt AC1993124,379,23128.9473920665
50Parvibaculum lavamentivorans DS-1BProt ARh1763913,914,74537.7373420142
51Paracoccus denitrificans PD1222BProt AR1302035,236,19433.2292512139
52Orientia tsutsugamushi str. IkedaBProt ARi1898312,008,98769.5330009
53Orientia tsutsugamushi str. BoryongBProt ARi1618012,127,05169.5330006
54Oligotropha carboxidovorans OM5BProt ARh2880513,745,62937.6272212239
55Ochrobactrum anthropi ATCC 49188BProt ARh1948565,205,77743.9262011429
56Novosphingobium aromaticivorans DSM 12444BProt AS20434,233,31434.9262101433
57Nitrobacter winogradskyi Nb-255BProt ARh1347413,402,09338.0221910232
58Nitrobacter hamburgensis X14BProt ARh1347345,011,52238.4352630641
59Neorickettsia sennetsu str. MiyayamaBProt ARi3571859,00658.9220003
60Neorickettsia risticii str. IllinoisBProt ARi190991879,97758.7220003
61Methylocella silvestris BL2BProt ARh2063514,305,43036.9352634245
62Methylobacterium sp. 4-46BProt ARh1880937,737,02528.592707213115
63Methylobacterium radiotolerans JCM 2831BProt ARh1881796,899,11029.088635317116
64Methylobacterium populi BJ001BProt ARh1955935,848,99730.693649416103
65Methylobacterium nodulans ORS 2060BProt ARh2047788,839,02231.6705482693
66Methylobacterium extorquens PA1BProt ARh1863715,471,15431.86945831383
67Methylobacterium extorquens DM4160933180,08335.0000000
68Methylobacterium extorquens AM1BProt ARh2056,879,77831.57451751194
69Methylobacterium chloromethanicum CM4BProt ARh1952736,180,73231.97854841295
70Mesorhizobium loti MAFF303099BProt ARh1837,596,29737.55136501059
71Maricaulis maris MCS10BProt AR1733313,368,78037.3343301046
72Magnetospirillum magneticum AMB-1BProt AR1621714,967,14834.98583110111
73Jannaschia sp. CCS1BProt AR1273324,404,04937.8161410122
74Hyphomonas neptunium ATCC 15444BProt AR1572113,705,02138.1221811229
75Hyphomicrobium denitrificans ATCC 51888BProt ARh3326113,638,96939.2362514648
76Hirschia baltica ATCC 49814BProt AR3319123,540,11454.8000001
77Granulibacter bethesdensis CGDNIH1BProt AR1711112,708,35540.9151211120
78Gluconobacter oxydans 621HBProt AR1332562,922,38439.2151021221
79Gluconacetobacter diazotrophicus PAl 5BProt AR37733,999,59133.7151311029
80Gluconacetobacter diazotrophicus PAl 5BProt AR2107123,914,94733.7141211028
81Erythrobacter litoralis HTCC2594BProt AS1348013,052,39836.9141020220
82Ehrlichia ruminantium str. WelgevondenBProt ARi961411,516,35572.5330004
83Ehrlichia ruminantium str. WelgevondenBProt ARi1335511,512,97772.5330005
84Ehrlichia ruminantium str. GardelBProt ARi1335611,499,92072.5330005
85Ehrlichia chaffeensis str. ArkansasBProt ARi32511,176,24869.9330004
86Ehrlichia canis str. JakeBProt ARi1069411,315,03071.0220004
87Dinoroseobacter shibae DFL 12BProt AR1741764,417,86834.5272511035
88Chelativorans sp. BNC1BProt ARh1069044,935,18538.9262100532
89Caulobacter sp. K31BProt AC1630635,889,39932.77053521082
90Caulobacter segnis ATCC 21756BProt AC3727714,655,62232.36848521372
91Caulobacter crescentus NA1000BProt AC3202714,042,92932.8544131963
92Caulobacter crescentus CB15BProt AC29814,016,94732.8544131963
93Candidatus Puniceispirillum marinum IMCC1322BProt AS2808112,753,52751.26600010
94Candidatus Pelagibacter ubique HTCC1062BProt ARi1398911,308,75970.3440005
95Candidatus Liberibacter asiaticus str. psy62BProt ARh2983511,226,70463.5440004
96Candidatus Hodgkinia cicadicola DsemBProt AC321351143,79541.6000000
97Brucella suis ATCC 23445BProt ARh2037123,324,60742.80N/AN/AN/AN/A0
98Brucella suis 1330BProt ARh32023,315,17542.7181510219
99Brucella ovis ATCC 25840BProt ARh1251423,275,59042.8171311219
100Brucella microti CCM 4915BProt ARh3223323,337,36942.7171410220
101Brucella melitensis bv. 1 str. 16MBProt ARh18023,294,93142.8191511220
102Brucella melitensis biovar Abortus 2308BProt ARh1620323,278,30742.8181411219
103Brucella melitensis ATCC 23457BProt ARh3056123,311,21942.8191511220
104Brucella canis ATCC 23365BProt ARh2024323,312,76942.8181510218
105Brucella abortus S19BProt ARh1899923,283,93642.8191511220
106Brucella abortus bv. 1 str. 9-941BProt ARh961923,286,44542.8191511220
107Bradyrhizobium sp. ORS278BProt ARh1957517,456,58734.56752211287
108Bradyrhizobium sp. BTAi1BProt ARh1613728,493,51335.27552451497
109Bradyrhizobium japonicum USDA 110BProt ARh1719,105,82835.98064457115
110Beijerinckia indica subsp. indica ATCC 9039BProt ARh2084134,418,61643.0322701439
111Bartonella tribocorum CIP 105476BProt ARh2810922,642,40461.2000000
112Bartonella quintana str. ToulouseBProt ARh4411,581,38461.210810110
113Bartonella henselae str. Houston-1BProt ARh19611,931,04761.810810110
114Bartonella grahamii as4aupBProt ARh3487322,369,52062.010810110
115Bartonella bacilliformis KC583BProt ARh1624911,445,02161.89710111
116Azospirillum sp. B510BProt AR3255177,599,73832.410189813142
117Anaplasma phagocytophilum HZBProt ARi33611,471,28258.4330004
118Anaplasma marginale str. St. MariesBProt ARi4011,197,68750.2330004
119Anaplasma marginale str. FloridaBProt ARi1636911,202,43550.2330004
120Anaplasma centrale str. IsraelBProt ARi3276511,206,80650.0330004
121Agrobacterium vitis S4BProt ARh1337276,320,94642.5483451858
122Agrobacterium tumefaciens str. C58BProt ARh28345,673,46541.0423221755
123Agrobacterium radiobacter K84BProt ARh1340257,273,30040.1373302259
124Acidiphilium cryptum JF-5BProt AR1575393,963,08032.9131300020
125Acetobacter pasteurianus IFO 3283-32BProt AR3113973,337,04046.9161510019
126Acetobacter pasteurianus IFO 3283-26BProt AR3113773,339,68346.9151410019
127Acetobacter pasteurianus IFO 3283-22BProt AR3113573,339,64946.9151410019
128Acetobacter pasteurianus IFO 3283-12BProt AR3220373,336,99046.9161510019
129Acetobacter pasteurianus IFO 3283-07BProt AR3113373,338,42646.9161510019
130Acetobacter pasteurianus IFO 3283-03BProt AR3113173,339,66946.9151410019
131Acetobacter pasteurianus IFO 3283-01-42CBProt AR3114173,247,99546.9161510019
132Acetobacter pasteurianus IFO 3283-01BProt AR3112973,340,24946.9161510019

Acknowledgements:

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