Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
132 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Ehrlichia ruminantium str. WelgevondenBProt ARi961411,516,35572.5N/A2N/A
2Ehrlichia ruminantium str. WelgevondenBProt ARi1335511,512,97772.5N/A2N/A
3Ehrlichia ruminantium str. GardelBProt ARi1335611,499,92072.5N/A2N/A
4Rickettsia typhi str. WilmingtonBProt ARi1067911,111,49671.1N/A2N/A
5Ehrlichia canis str. JakeBProt ARi1069411,315,03071.0N/A2N/A
6Rickettsia prowazekii str. Madrid EBProt ARi4311,111,52371.0N/A2N/A
7Rickettsia prowazekii Rp22BProt ARi1981311,111,61271.0N/A2N/A
8Candidatus Pelagibacter ubique HTCC1062BProt ARi1398911,308,75970.3N/A2N/A
9Ehrlichia chaffeensis str. ArkansasBProt ARi32511,176,24869.9N/A2N/A
10Orientia tsutsugamushi str. IkedaBProt ARi1898312,008,98769.5N/A2N/A
11Orientia tsutsugamushi str. BoryongBProt ARi1618012,127,05169.5N/A2N/A
12Rickettsia canadensis str. McKielBProt ARi1295211,159,77268.9N/A2N/A
13Rickettsia bellii OSU 85-389BProt ARi1723711,528,98068.4N/A1N/A
14Rickettsia bellii RML369-CBProt ARi1399611,522,07668.3N/A2N/A
15Rickettsia akari str. HartfordBProt ARi1295311,231,06067.7N/A2N/A
16Rickettsia africae ESF-5BProt ARi1826921,290,91767.6N/A2N/A
17Rickettsia conorii str. Malish 7BProt ARi4211,268,75567.6N/A2N/A
18Rickettsia rickettsii str. IowaBProt ARi1994311,268,17567.5N/A2N/A
19Rickettsia rickettsii str. 'Sheila Smith'BProt ARi963611,257,71067.5N/A2N/A
20Rickettsia felis URRWXCal2BProt ARi1388431,587,24067.5N/A2N/A
21Rickettsia massiliae MTU5BProt ARi1827121,376,18467.5N/A2N/A
22Rickettsia peacockii str. RusticBProt ARi3130921,314,89867.4N/A2N/A
23Wolbachia endosymbiont strain TRS of Brugia malayiBProt ARi1247511,080,08465.8N/A2N/A
24Wolbachia endosymbiont of Culex quinquefasciatus PelBProt ARi3031311,482,45565.8N/A2N/A
25Wolbachia sp. wRiBProt ARi3327311,445,87364.8N/A2N/A
26Wolbachia endosymbiont of Drosophila melanogasterBProt ARi27211,267,78264.8N/A2N/A
27Candidatus Liberibacter asiaticus str. psy62BProt ARh2983511,226,70463.5N/A2N/A
28Bartonella grahamii as4aupBProt ARh3487322,369,52062.0N/A31
29Bartonella henselae str. Houston-1BProt ARh19611,931,04761.8N/A31
30Bartonella bacilliformis KC583BProt ARh1624911,445,02161.8N/A3N/A
31Bartonella quintana str. ToulouseBProt ARh4411,581,38461.2N/A31
32Bartonella tribocorum CIP 105476BProt ARh2810922,642,40461.2N/AN/A1
33Neorickettsia sennetsu str. MiyayamaBProt ARi3571859,00658.9N/A2N/A
34Neorickettsia risticii str. IllinoisBProt ARi190991879,97758.7N/A2N/A
35Anaplasma phagocytophilum HZBProt ARi33611,471,28258.4N/A2N/A
36Hirschia baltica ATCC 49814BProt AR3319123,540,11454.8N/AN/AN/A
37Zymomonas mobilis subsp. mobilis ZM4BProt AS1235412,056,41653.7131
38Zymomonas mobilis subsp. mobilis NCIMB 11163BProt AS3482142,223,52053.4131
39Candidatus Puniceispirillum marinum IMCC1322BProt AS2808112,753,52751.213N/A
40Anaplasma marginale str. St. MariesBProt ARi4011,197,68750.2N/A2N/A
41Anaplasma marginale str. FloridaBProt ARi1636911,202,43550.2N/A2N/A
42Anaplasma centrale str. IsraelBProt ARi3276511,206,80650.0N/A2N/A
43Acetobacter pasteurianus IFO 3283-12BProt AR3220373,336,99046.9N/A22
44Acetobacter pasteurianus IFO 3283-32BProt AR3113973,337,04046.9N/A22
45Acetobacter pasteurianus IFO 3283-01BProt AR3112973,340,24946.9N/A22
46Acetobacter pasteurianus IFO 3283-26BProt AR3113773,339,68346.9N/A22
47Acetobacter pasteurianus IFO 3283-03BProt AR3113173,339,66946.9N/A22
48Acetobacter pasteurianus IFO 3283-22BProt AR3113573,339,64946.9N/A22
49Acetobacter pasteurianus IFO 3283-07BProt AR3113373,338,42646.9N/A22
50Acetobacter pasteurianus IFO 3283-01-42CBProt AR3114173,247,99546.9N/A22
51Ochrobactrum anthropi ATCC 49188BProt ARh1948565,205,77743.9139
52Beijerinckia indica subsp. indica ATCC 9039BProt ARh2084134,418,61643.0125
53Brucella ovis ATCC 25840BProt ARh1251423,275,59042.8132
54Brucella suis ATCC 23445BProt ARh2037123,324,60742.8N/AN/A2
55Brucella melitensis ATCC 23457BProt ARh3056123,311,21942.8132
56Brucella melitensis biovar Abortus 2308BProt ARh1620323,278,30742.8132
57Brucella abortus bv. 1 str. 9-941BProt ARh961923,286,44542.8132
58Brucella abortus S19BProt ARh1899923,283,93642.8132
59Brucella melitensis bv. 1 str. 16MBProt ARh18023,294,93142.8131
60Brucella canis ATCC 23365BProt ARh2024323,312,76942.8132
61Brucella suis 1330BProt ARh32023,315,17542.7132
62Brucella microti CCM 4915BProt ARh3223323,337,36942.7132
63Agrobacterium vitis S4BProt ARh1337276,320,94642.5139
64Candidatus Hodgkinia cicadicola DsemBProt AC321351143,79541.6N/AN/AN/A
65Roseobacter denitrificans OCh 114BProt AR1642654,331,23441.1N/A36
66Agrobacterium tumefaciens str. C58BProt ARh28345,673,46541.01211
67Granulibacter bethesdensis CGDNIH1BProt AR1711112,708,35540.9122
68Agrobacterium radiobacter K84BProt ARh1340257,273,30040.1134
69Ruegeria sp. TM1040BProt AR1304034,153,69939.9N/A36
70Rhizobium leguminosarum bv. trifolii WSM1325BProt ARh2009767,418,12239.21316
71Hyphomicrobium denitrificans ATCC 51888BProt ARh3326113,638,96939.2127
72Gluconobacter oxydans 621HBProt AR1332562,922,38439.2124
73Rhizobium leguminosarum bv. viciae 3841BProt ARh34477,751,30939.11314
74Rhizobium etli CFN 42BProt ARh1393276,530,22839.0237
75Chelativorans sp. BNC1BProt ARh1069044,935,18538.9236
76Sinorhizobium medicae WSM419BProt ARh1630446,817,57638.81310
77Rhizobium leguminosarum bv. trifolii WSM2304BProt ARh2017956,872,70238.82316
78Rhizobium etli CIAT 652BProt ARh2802146,448,04838.72314
79Nitrobacter hamburgensis X14BProt ARh1347345,011,52238.4128
80Hyphomonas neptunium ATCC 15444BProt AR1572113,705,02138.1138
81Nitrobacter winogradskyi Nb-255BProt ARh1347413,402,09338.01213
82Sinorhizobium meliloti 1021BProt ARh1936,691,69437.81311
83Jannaschia sp. CCS1BProt AR1273324,404,04937.8N/A36
84Parvibaculum lavamentivorans DS-1BProt ARh1763913,914,74537.7135
85Oligotropha carboxidovorans OM5BProt ARh2880513,745,62937.6138
86Rhizobium sp. NGR234BProt ARh2110136,891,90037.61310
87Mesorhizobium loti MAFF303099BProt ARh1837,596,29737.523N/A
88Maricaulis maris MCS10BProt AR1733313,368,78037.3137
89Erythrobacter litoralis HTCC2594BProt AS1348013,052,39836.9126
90Methylocella silvestris BL2BProt ARh2063514,305,43036.9128
91Bradyrhizobium japonicum USDA 110BProt ARh1719,105,82835.92417
92Rhodopseudomonas palustris BisA53BProt ARh1575115,505,49435.61219
93Bradyrhizobium sp. BTAi1BProt ARh1613728,493,51335.21215
94Rhodopseudomonas palustris BisB5BProt ARh1574914,892,71735.212N/A
95Sphingobium japonicum UT26SBProt AS1994954,424,86235.1139
96Rhodopseudomonas palustris TIE-1BProt ARh2016715,744,04135.11315
97Rhodopseudomonas palustris BisB18BProt ARh1575015,513,84435.0129
98Methylobacterium extorquens DM4160933180,08335.0N/AN/AN/A
99Rhodopseudomonas palustris CGA009BProt ARh5725,467,64035.01216
100Magnetospirillum magneticum AMB-1BProt AR1621714,967,14834.9134
101Novosphingobium aromaticivorans DSM 12444BProt AS20434,233,31434.9136
102Rhodospirillum rubrum ATCC 11170BProt AR5824,406,55734.6137
103Sphingopyxis alaskensis RB2256BProt AS1390723,373,71334.51311
104Bradyrhizobium sp. ORS278BProt ARh1957517,456,58734.51215
105Dinoroseobacter shibae DFL 12BProt AR1741764,417,86834.5135
106Rhodopseudomonas palustris HaA2BProt ARh1574715,331,65634.01319
107Gluconacetobacter diazotrophicus PAl 5BProt AR2107123,914,94733.7223
108Gluconacetobacter diazotrophicus PAl 5BProt AR37733,999,59133.7223
109Rhodobacter capsulatus SB 1003BProt AR5523,871,92033.4133
110Paracoccus denitrificans PD1222BProt AR1302035,236,19433.2138
111Acidiphilium cryptum JF-5BProt AR1575393,963,08032.9123
112Caulobacter crescentus NA1000BProt AC3202714,042,92932.81215
113Caulobacter crescentus CB15BProt AC29814,016,94732.81215
114Xanthobacter autotrophicus Py2BProt ARh1575625,625,09832.71214
115Caulobacter sp. K31BProt AC1630635,889,39932.71228
116Azospirillum sp. B510BProt AR3255177,599,73832.41610
117Caulobacter segnis ATCC 21756BProt AC3727714,655,62232.31225
118Starkeya novella DSM 506BProt ARh3765914,765,02332.1137
119Sphingomonas wittichii RW1BProt AS1734335,915,24632.11314
120Methylobacterium chloromethanicum CM4BProt ARh1952736,180,73231.91314
121Methylobacterium extorquens PA1BProt ARh1863715,471,15431.8139
122Rhodobacter sphaeroides ATCC 17025BProt AR1575564,557,12731.8345
123Methylobacterium nodulans ORS 2060BProt ARh2047788,839,02231.62316
124Methylobacterium extorquens AM1BProt ARh2056,879,77831.51514
125Rhodobacter sphaeroides 2.4.1BProt AR5674,603,06031.2448
126Rhodobacter sphaeroides ATCC 17029BProt AR1575434,489,38031.04410
127Rhodobacter sphaeroides KD131BProt AR3111144,711,13930.94410
128Methylobacterium populi BJ001BProt ARh1955935,848,99730.61311
129Rhodospirillum centenum SWBProt AR1830714,355,54829.51413
130Methylobacterium radiotolerans JCM 2831BProt ARh1881796,899,11029.01316
131Phenylobacterium zucineum HLK1BProt AC1993124,379,23128.91417
132Methylobacterium sp. 4-46BProt ARh1880937,737,02528.513N/A

Acknowledgements:

This research is funded by:

Developed by: