Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
132 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATHisKA
Count
HisKA 1
Count
HisKA 2
Count
HisKA 3
Count
HWE HK
Count
RRReceiver
Count
1Brucella suis ATCC 23445BProt ARh2037123,324,60742.80N/AN/AN/AN/A0
2Mesorhizobium loti MAFF303099BProt ARh1837,596,29737.55136501059
3Anaplasma marginale str. St. MariesBProt ARi4011,197,68750.2330004
4Rickettsia conorii str. Malish 7BProt ARi4211,268,75567.6440004
5Rickettsia prowazekii str. Madrid EBProt ARi4311,111,52371.0440004
6Bartonella quintana str. ToulouseBProt ARh4411,581,38461.210810110
7Rhodobacter sphaeroides 2.4.1BProt AR5674,603,06031.2362760353
8Rhodospirillum rubrum ATCC 11170BProt AR5824,406,55734.6383240257
9Bartonella henselae str. Houston-1BProt ARh19611,931,04761.810810110
10Wolbachia endosymbiont of Drosophila melanogasterBProt ARi27211,267,78264.8220003
11Brucella suis 1330BProt ARh32023,315,17542.7181510219
12Ehrlichia chaffeensis str. ArkansasBProt ARi32511,176,24869.9330004
13Anaplasma phagocytophilum HZBProt ARi33611,471,28258.4330004
14Neorickettsia sennetsu str. MiyayamaBProt ARi3571859,00658.9220003
15Ehrlichia ruminantium str. WelgevondenBProt ARi961411,516,35572.5330004
16Rickettsia rickettsii str. 'Sheila Smith'BProt ARi963611,257,71067.5440003
17Rickettsia typhi str. WilmingtonBProt ARi1067911,111,49671.1440004
18Chelativorans sp. BNC1BProt ARh1069044,935,18538.9262100532
19Ehrlichia canis str. JakeBProt ARi1069411,315,03071.0220004
20Zymomonas mobilis subsp. mobilis ZM4BProt AS1235412,056,41653.79720014
21Wolbachia endosymbiont strain TRS of Brugia malayiBProt ARi1247511,080,08465.8220003
22Jannaschia sp. CCS1BProt AR1273324,404,04937.8161410122
23Rickettsia canadensis str. McKielBProt ARi1295211,159,77268.9330004
24Rickettsia akari str. HartfordBProt ARi1295311,231,06067.7330004
25Ehrlichia ruminantium str. WelgevondenBProt ARi1335511,512,97772.5330005
26Ehrlichia ruminantium str. GardelBProt ARi1335611,499,92072.5330005
27Nitrobacter hamburgensis X14BProt ARh1347345,011,52238.4352630641
28Nitrobacter winogradskyi Nb-255BProt ARh1347413,402,09338.0221910232
29Erythrobacter litoralis HTCC2594BProt AS1348013,052,39836.9141020220
30Rickettsia felis URRWXCal2BProt ARi1388431,587,24067.5440004
31Sphingopyxis alaskensis RB2256BProt AS1390723,373,71334.5131100223
32Candidatus Pelagibacter ubique HTCC1062BProt ARi1398911,308,75970.3440005
33Rickettsia bellii RML369-CBProt ARi1399611,522,07668.3440004
34Acidiphilium cryptum JF-5BProt AR1575393,963,08032.9131300020
35Rhodobacter sphaeroides ATCC 17029BProt AR1575434,489,38031.0332650251
36Rhodobacter sphaeroides ATCC 17025BProt AR1575564,557,12731.8322360349
37Xanthobacter autotrophicus Py2BProt ARh1575625,625,09832.7434030052
38Methylobacterium extorquens DM4160933180,08335.0000000
39Orientia tsutsugamushi str. BoryongBProt ARi1618012,127,05169.5330006
40Bartonella bacilliformis KC583BProt ARh1624911,445,02161.89710111
41Anaplasma marginale str. FloridaBProt ARi1636911,202,43550.2330004
42Rickettsia bellii OSU 85-389BProt ARi1723711,528,98068.4440004
43Sphingomonas wittichii RW1BProt AS1734335,915,24632.1353120258
44Parvibaculum lavamentivorans DS-1BProt ARh1763913,914,74537.7373420142
45Rickettsia africae ESF-5BProt ARi1826921,290,91767.6330004
46Rickettsia massiliae MTU5BProt ARi1827121,376,18467.5330004
47Rhodospirillum centenum SWBProt AR1830714,355,54829.5483940555
48Orientia tsutsugamushi str. IkedaBProt ARi1898312,008,98769.5330009
49Neorickettsia risticii str. IllinoisBProt ARi190991879,97758.7220003
50Rickettsia prowazekii Rp22BProt ARi1981311,111,61271.0440004
51Phenylobacterium zucineum HLK1BProt AC1993124,379,23128.9473920665
52Rickettsia rickettsii str. IowaBProt ARi1994311,268,17567.5440004
53Sphingobium japonicum UT26SBProt AS1994954,424,86235.1282420243
54Brucella canis ATCC 23365BProt ARh2024323,312,76942.8181510218
55Rhizobium etli CIAT 652BProt ARh2802146,448,04838.7433620557
56Candidatus Puniceispirillum marinum IMCC1322BProt AS2808112,753,52751.26600010
57Bartonella tribocorum CIP 105476BProt ARh2810922,642,40461.2000000
58Candidatus Liberibacter asiaticus str. psy62BProt ARh2983511,226,70463.5440004
59Wolbachia endosymbiont of Culex quinquefasciatus PelBProt ARi3031311,482,45565.8220003
60Acetobacter pasteurianus IFO 3283-01BProt AR3112973,340,24946.9161510019
61Acetobacter pasteurianus IFO 3283-03BProt AR3113173,339,66946.9151410019
62Acetobacter pasteurianus IFO 3283-07BProt AR3113373,338,42646.9161510019
63Acetobacter pasteurianus IFO 3283-22BProt AR3113573,339,64946.9151410019
64Acetobacter pasteurianus IFO 3283-26BProt AR3113773,339,68346.9151410019
65Acetobacter pasteurianus IFO 3283-32BProt AR3113973,337,04046.9161510019
66Acetobacter pasteurianus IFO 3283-01-42CBProt AR3114173,247,99546.9161510019
67Rickettsia peacockii str. RusticBProt ARi3130921,314,89867.4330004
68Candidatus Hodgkinia cicadicola DsemBProt AC321351143,79541.6000000
69Acetobacter pasteurianus IFO 3283-12BProt AR3220373,336,99046.9161510019
70Brucella microti CCM 4915BProt ARh3223323,337,36942.7171410220
71Anaplasma centrale str. IsraelBProt ARi3276511,206,80650.0330004
72Hirschia baltica ATCC 49814BProt AR3319123,540,11454.8000001
73Wolbachia sp. wRiBProt ARi3327311,445,87364.8220003
74Zymomonas mobilis subsp. mobilis NCIMB 11163BProt AS3482142,223,52053.49720014
75Bartonella grahamii as4aupBProt ARh3487322,369,52062.010810110
76Rhodobacter capsulatus SB 1003BProt AR5523,871,92033.4262321043
77Brucella melitensis bv. 1 str. 16MBProt ARh18023,294,93142.8191511220
78Novosphingobium aromaticivorans DSM 12444BProt AS20434,233,31434.9262101433
79Agrobacterium tumefaciens str. C58BProt ARh28345,673,46541.0423221755
80Caulobacter crescentus CB15BProt AC29814,016,94732.8544131963
81Rhizobium leguminosarum bv. viciae 3841BProt ARh34477,751,30939.1544531571
82Gluconacetobacter diazotrophicus PAl 5BProt AR37733,999,59133.7151311029
83Brucella abortus bv. 1 str. 9-941BProt ARh961923,286,44542.8191511220
84Brucella ovis ATCC 25840BProt ARh1251423,275,59042.8171311219
85Ruegeria sp. TM1040BProt AR1304034,153,69939.9363411039
86Gluconobacter oxydans 621HBProt AR1332562,922,38439.2151021221
87Agrobacterium vitis S4BProt ARh1337276,320,94642.5483451858
88Rhizobium etli CFN 42BProt ARh1393276,530,22839.0473931462
89Hyphomonas neptunium ATCC 15444BProt AR1572113,705,02138.1221811229
90Rhodopseudomonas palustris BisB18BProt ARh1575015,513,84435.0524361278
91Brucella melitensis biovar Abortus 2308BProt ARh1620323,278,30742.8181411219
92Magnetospirillum magneticum AMB-1BProt AR1621714,967,14834.98583110111
93Sinorhizobium medicae WSM419BProt ARh1630446,817,57638.8402921855
94Roseobacter denitrificans OCh 114BProt AR1642654,331,23441.1201721031
95Granulibacter bethesdensis CGDNIH1BProt AR1711112,708,35540.9151211120
96Maricaulis maris MCS10BProt AR1733313,368,78037.3343301046
97Dinoroseobacter shibae DFL 12BProt AR1741764,417,86834.5272511035
98Brucella abortus S19BProt ARh1899923,283,93642.8191511220
99Ochrobactrum anthropi ATCC 49188BProt ARh1948565,205,77743.9262011429
100Bradyrhizobium sp. ORS278BProt ARh1957517,456,58734.56752211287
101Rhizobium leguminosarum bv. trifolii WSM1325BProt ARh2009767,418,12239.2644871884
102Rhizobium leguminosarum bv. trifolii WSM2304BProt ARh2017956,872,70238.8524221763
103Beijerinckia indica subsp. indica ATCC 9039BProt ARh2084134,418,61643.0322701439
104Gluconacetobacter diazotrophicus PAl 5BProt AR2107123,914,94733.7141211028
105Rhizobium sp. NGR234BProt ARh2110136,891,90037.6373011554
106Brucella melitensis ATCC 23457BProt ARh3056123,311,21942.8191511220
107Rhodobacter sphaeroides KD131BProt AR3111144,711,13930.9362651452
108Caulobacter crescentus NA1000BProt AC3202714,042,92932.8544131963
109Azospirillum sp. B510BProt AR3255177,599,73832.410189813142
110Sinorhizobium meliloti 1021BProt ARh1936,691,69437.8382802853
111Rhodopseudomonas palustris CGA009BProt ARh5725,467,64035.0533942869
112Paracoccus denitrificans PD1222BProt AR1302035,236,19433.2292512139
113Agrobacterium radiobacter K84BProt ARh1340257,273,30040.1373302259
114Rhodopseudomonas palustris BisB5BProt ARh1574914,892,71735.2463732462
115Rhodopseudomonas palustris BisA53BProt ARh1575115,505,49435.6474122276
116Caulobacter sp. K31BProt AC1630635,889,39932.77053521082
117Methylobacterium sp. 4-46BProt ARh1880937,737,02528.592707213115
118Rhodopseudomonas palustris TIE-1BProt ARh2016715,744,04135.1523932869
119Methylobacterium nodulans ORS 2060BProt ARh2047788,839,02231.6705482693
120Oligotropha carboxidovorans OM5BProt ARh2880513,745,62937.6272212239
121Caulobacter segnis ATCC 21756BProt AC3727714,655,62232.36848521372
122Starkeya novella DSM 506BProt ARh3765914,765,02332.1353112150
123Rhodopseudomonas palustris HaA2BProt ARh1574715,331,65634.0504053271
124Methylobacterium extorquens PA1BProt ARh1863715,471,15431.86945831383
125Methylobacterium radiotolerans JCM 2831BProt ARh1881796,899,11029.088635317116
126Methylobacterium chloromethanicum CM4BProt ARh1952736,180,73231.97854841295
127Methylobacterium populi BJ001BProt ARh1955935,848,99730.693649416103
128Methylocella silvestris BL2BProt ARh2063514,305,43036.9352634245
129Hyphomicrobium denitrificans ATCC 51888BProt ARh3326113,638,96939.2362514648
130Bradyrhizobium japonicum USDA 110BProt ARh1719,105,82835.98064457115
131Methylobacterium extorquens AM1BProt ARh2056,879,77831.57451751194
132Bradyrhizobium sp. BTAi1BProt ARh1613728,493,51335.27552451497

Acknowledgements:

This research is funded by:

Developed by: